CmaCh06G001890 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G001890
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	elongation factor P
Location	Cma_Chr06: 965850 .. 969882 (-)
RNA-Seq Expression	CmaCh06G001890
Synteny	CmaCh06G001890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAAATCCTGCCCTCCCAGGCCTTATCCCCGAACGACGCCTCACTCGTTTCCTGTCATTCTTCGCAAGACTCGAGGGGGAACGCTCAGAGAAACCACTTACAGTTGCCGAGACGCTCCCAGACATGGCTGACGCTCTCCTCTGTAATGCCTCGTTGTCTTCTGCTTTTCTCGCCCGCCGCTCATCGTCAATGACTTCTCTTTCGCTCTCTTCGAAGCCGTCTGTTCTCCGAACCCGGCGGTTTTCCTCGGCTAATTCGCGTACCAGATTTTCGAGTAAACCCTTCGATTATGGCATTGCTCCGTGTCATTTCTGAATGTTCGATTGAATTTCATTCCTCGGTATAGCGTTGTAATTTTTGTTGCACTTTCAGGGATTTATGCGTTAACTAGCAACGACATCAAAGTTGGCACCAATATTGAAGTGGATGGATTTCCTTGGCGGGTTTTAGGTTGTTTCTCTACCCCTTGTCTAATTTCCCCTTCCCCAATCATTATTTATTGCTGCTCGATTTTTCAAACCGGAGTGAGTGTTCTTGAATTGTTGTTTTTTGGATAGAGTTCCTTCATGTTAAACCCGGCAAAGGAGCAGCTTTTGTAAGGACCAAAATTCGCAATTATGTATCAGGAAATACGGTTGAGAGAACTTTTCGAGCAGGAAGCTCGGTGAGTAGCAGAATTATTATCTAGTCATGCATGCGAGAATTTTCAGTTCATATATATTTCAAACCTATAATCACTGCTGAATGGTTCAATATCATCCACTTTGTTTCCCATTGATTTTGGTAGATATCATCTCTCTTGTTTAAATTGAACTCAGATATCTGTTTCAGCTTTTATTTCATTGATATCCCCATCCTATTAAACGGGCTAGAAAGTTATGGGAGCTTTTAGCTACTCATAACGTGAGATTCCAATGTCAGTTAGAGAGGGAAGGAAACCTTCTTTATAAGAGTGTGGAAACCTCTCTCCAGTAGATGCGGTTTAGAACCGTGAGACTGATGGCGATACGTAACAGGTCAAAGCGGACAATATCTACTAGTGTTAGGCTTGGACTGTTACAAATGGTATCAAGGTCAAACACCGGGCGGTGTGCCGGCCACGACGCTGGTCCTCCAGGGGGTAGATTGTGAGATCCCACATTGGTTGGAGAGGGGAATGAAACATTCCTTATAAGGGTGTGAAAACCTCTCCCTAGTAGATGCATTTTAAAACCGTGAGGCTGAGGGTGACACGTAACGAGCCAAAGCAAACAATATCTACTACCGGTGGGCTTGGGCTTGCAAAAAATTGACATTATCAAGACAGATTTATCTGCTAGATTTCAACAACTGTGTAGAAAATAGGATGCTATATCCAACCACACTGGAAATGAATTATGCCTTCAAATGCTTTCTCAAGACCTTGATTTTGGAAAAGATTTGCTACAATTGTGTTGTTTCTTCTTTCATATTTTCTTCCTCGTCCGTTCTTAATCATTTGTCTTTAATTGTCTTTCCAGCTTGATGAGGCCAATGTATACAAGGAAGTCAAGCAGTTCACATACAAAGATGGTTCCCAGTTTGTTTTCATGGATCTGGTATATAAATACACACGCGCGCGCACACACACGCACATGCACACACGTATATGCAGTTATGATTTGATCGTTATTGTCTCCTTTCTCATAATTCGCAAAGAATTTCTCTCTAGACAACTTGATATATAGGGTAGCTCTTCTCATAGTCACTTTCTATGGGAAGCTAGTTAGTGAATACATTTTAGTTTGCTAGTCACACCTGCATCAAATAAGTCTAATTGGCTCATTTTTCAGAATACGTATGAAGAAATACGCCTAAATGCAGCAGACGTTGGTGATAGGACAAAGTGGCTGAAAGAAGGAATGGACTGCATCGTATTGTTTTGGAATGGGAAGGTAAATCCGATCACTTAGACAGCTTTTGACAGGCATTTTTTTTACTGTGTGTCCCGAATAGAGTTCATAACAACGTGGCTCTTAAATGGTTCGCTCTCGAAAAATACGATAAGATTTAGCAGCTTTCCTATTTCTTGATGAATGAGTCACATGCCATGAACATTGCCTTCAAGTTTCTACAAAGTGACAGTGTGGCATCAGTTCTAAGAAGTGAAATATGATGATAGTAATTCTTGAGTCGTCTCATTTCTCTGTTCTCCCATCTTTTAGGTTATTGATTTTGAGGTTCCCAACACAATTCAATTGACTGTGGTTGACGTTGATCCTGGACTGAAAGGGGACACTGCACAAGGTACCACACTTGTCTTTTAGGACCTAAAAAAAATCTTCTTTCAATGCTTTGTTAATGATTTGCAGCGAGATAAGGTTCTTTGTATTTAAATGGGCTAAAATTTCCATAACATATTTGAGCATGATTAGATTAGTGTACAAAACCAATTTCTTAATTATCAAGATCCCAAGCACCCAAAAATGATAAGGAATTAAATTAACCCTTTTAGAATGGATTATCTTGATGATCAAGATCAAGAGTAAAAAAAATTTATTTCTAAGCTTGTGATTTGAATCATTTCACAAGATAGTTTAATAAAAATTATTTGAATGACTCTAACATGCAAATCTAAACACAAGAAATGCAAAGGAACAAGCTGAAGCAGATAGCTTGCATAATATGAAACTTCATTATAATTTCTAAAATTTTCATACTAAAGCACTAACATGAATAACTATTTATATCTTTGAAAATAAACATTATAGTAACCTATGGTTAATTAAAAGGTTGTAACTTTTATCTTCATCGGACCACTATCTAAATGTAACTTATAATCTTAAAGAGAATTCTCTATAATTTTAAAAAATACAATAAAACCTCCATAAATCCAAGCAACGCGCATGGATCTTGTCATCAACTATGAAATGTTTGTGGCATGATTAAGTCTCTTTATTTCGTATCACCTAGATTTATGAAATTTATGCTGTGTACTATTTAGAAAAGCAACTGTAACCGTCTCAATCTGTATAGTTTGTTTTTAGCTTGTGAGTTTTTAACTTGTTTTAGGTACATTTCATAGCTTGTATTTATGTAACTTGAGTTCATGTAGTCCCTGAGATTATCAAGTCCTTAATTTAGAATAAACAAACGTACATTCTAATATGAGTATGATTTCCTAATCTTAAGTTGCAGAGATCTAATTCATAGACTAGACATTCCTTAAAAAGTTGAACATTTATGATAATTTCAATGTGAGGTCCCACATTCTGTGAGATCCCTCATCAGTTGGAGAGAGGAACGAAGCATTCCTTATAAGGGTGTGGAAAAAGTCTCTCCCTAATAGACACATCTTAAAGCTGTGAGGTTGACAGTGATACGTAACGGGGTAAAGCAGACAATATCTACTAATGGTAGGTTTTGGCTGTTACATTCCATTACCCACATGATGATTGGAAACAACAATTTCCTCCCTTCAAGCGACAACCTCGTTAACCTCGATTCGCTCGATCCTCAACCATATGGTTTGTGTCTGCGTCATGGTCGACATAGATTTCCTGGTCTTAGTCATTCGGATTGGTTCTTTTTCACCAAGCACCATTCTGTCCTCTCCCCACCCTCCAGCCACAATACTTTTTTCTTAATAATTACTTTGGCAGCCTTCTAATTAAAGATGAAATTTGATTGACAGGTGGTTCGAAGCCCGCAACTCTTGAAACTGGAGCTGTTGTGAATGTCCCTCTGTTTGTAAACGTAGGCGATAGCATAGTGGTAGATACCAGGACTGGCCAATACACGAGCCGGGCATGAAATTTGAAACACACTTGACACTCATCGGCGGCAGGTTTTGTCAGTACTCTTCTAAAGAGCAATTATTTTGGTCTCTGTTGTAGATTCCTCTCCTTCTACTCTTTTGACTATTAAGCTTTGGATTCCTTAGTTAGTGCTGAAGTATCTCCAAGTATATACCAAATTAGGGACGAACTAAATTCATGATTGTTACACAATTTTCGATACTTTAAGTATTTACTTAATTCATTTCTAAAAATAAAGATATAATTAATTTTTCAA

mRNA sequence

GTGAAATCCTGCCCTCCCAGGCCTTATCCCCGAACGACGCCTCACTCGTTTCCTGTCATTCTTCGCAAGACTCGAGGGGGAACGCTCAGAGAAACCACTTACAGTTGCCGAGACGCTCCCAGACATGGCTGACGCTCTCCTCTGTAATGCCTCGTTGTCTTCTGCTTTTCTCGCCCGCCGCTCATCGTCAATGACTTCTCTTTCGCTCTCTTCGAAGCCGTCTGTTCTCCGAACCCGGCGGTTTTCCTCGGCTAATTCGCGTACCAGATTTTCGAGGATTTATGCGTTAACTAGCAACGACATCAAAGTTGGCACCAATATTGAAGTGGATGGATTTCCTTGGCGGGTTTTAGAGTTCCTTCATGTTAAACCCGGCAAAGGAGCAGCTTTTGTAAGGACCAAAATTCGCAATTATGTATCAGGAAATACGGTTGAGAGAACTTTTCGAGCAGGAAGCTCGCTTGATGAGGCCAATGTATACAAGGAAGTCAAGCAGTTCACATACAAAGATGGTTCCCAGTTTGTTTTCATGGATCTGAATACGTATGAAGAAATACGCCTAAATGCAGCAGACGTTGGTGATAGGACAAAGTGGCTGAAAGAAGGAATGGACTGCATCGTATTGTTTTGGAATGGGAAGGTTATTGATTTTGAGGTTCCCAACACAATTCAATTGACTGTGGTTGACGTTGATCCTGGACTGAAAGGGGACACTGCACAAGGTGGTTCGAAGCCCGCAACTCTTGAAACTGGAGCTGTTGTGAATGTCCCTCTGTTTGTAAACGTAGGCGATAGCATAGTGGTAGATACCAGGACTGGCCAATACACGAGCCGGGCATGAAATTTGAAACACACTTGACACTCATCGGCGGCAGGTTTTGTCAGTACTCTTCTAAAGAGCAATTATTTTGGTCTCTGTTGTAGATTCCTCTCCTTCTACTCTTTTGACTATTAAGCTTTGGATTCCTTAGTTAGTGCTGAAGTATCTCCAAGTATATACCAAATTAGGGACGAACTAAATTCATGATTGTTACACAATTTTCGATACTTTAAGTATTTACTTAATTCATTTCTAAAAATAAAGATATAATTAATTTTTCAA

Coding sequence (CDS)

ATGGCTGACGCTCTCCTCTGTAATGCCTCGTTGTCTTCTGCTTTTCTCGCCCGCCGCTCATCGTCAATGACTTCTCTTTCGCTCTCTTCGAAGCCGTCTGTTCTCCGAACCCGGCGGTTTTCCTCGGCTAATTCGCGTACCAGATTTTCGAGGATTTATGCGTTAACTAGCAACGACATCAAAGTTGGCACCAATATTGAAGTGGATGGATTTCCTTGGCGGGTTTTAGAGTTCCTTCATGTTAAACCCGGCAAAGGAGCAGCTTTTGTAAGGACCAAAATTCGCAATTATGTATCAGGAAATACGGTTGAGAGAACTTTTCGAGCAGGAAGCTCGCTTGATGAGGCCAATGTATACAAGGAAGTCAAGCAGTTCACATACAAAGATGGTTCCCAGTTTGTTTTCATGGATCTGAATACGTATGAAGAAATACGCCTAAATGCAGCAGACGTTGGTGATAGGACAAAGTGGCTGAAAGAAGGAATGGACTGCATCGTATTGTTTTGGAATGGGAAGGTTATTGATTTTGAGGTTCCCAACACAATTCAATTGACTGTGGTTGACGTTGATCCTGGACTGAAAGGGGACACTGCACAAGGTGGTTCGAAGCCCGCAACTCTTGAAACTGGAGCTGTTGTGAATGTCCCTCTGTTTGTAAACGTAGGCGATAGCATAGTGGTAGATACCAGGACTGGCCAATACACGAGCCGGGCATGA

Protein sequence

MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSSANSRTRFSRIYALTSNDIKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPNTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA

Homology

[Close]

BLAST of CmaCh06G001890 vs. ExPASy Swiss-Prot
Match: Q54760 (Elongation factor P OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=efp PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-62
Identity = 109/183 (59.56%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 55  LTSNDIKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLD 114
           ++SND + GT IE+DG  WRV+EFLHVKPGKG+AFVRTK++N  +GN VE+TFRAG ++ 
Sbjct: 2   ISSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRTKLKNAKTGNVVEKTFRAGETVP 61

Query: 115 EANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 174
           +A + K   Q+TYKDG  FVFMD+ TYEE RL AA +GDR K+LKEGM+  V+ WNG+VI
Sbjct: 62  QAVLEKSTLQYTYKDGDDFVFMDMETYEEGRLTAATIGDRVKYLKEGMEANVITWNGQVI 121

Query: 175 DFEVPNTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQY 234
           + E+PN++ L V++ DPG+KGDTA GG+KPA +ETGA V VPLF++VG+ I +DTR   Y
Sbjct: 122 EVELPNSVVLEVIETDPGVKGDTATGGTKPAKVETGAQVMVPLFISVGERIKIDTRNDSY 181

Query: 235 TSR 238
             R
Sbjct: 182 LGR 184

[Close]

BLAST of CmaCh06G001890 vs. ExPASy Swiss-Prot
Match: Q5N1T5 (Elongation factor P OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=efp PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-62
Identity = 109/183 (59.56%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 55  LTSNDIKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLD 114
           ++SND + GT IE+DG  WRV+EFLHVKPGKG+AFVRTK++N  +GN VE+TFRAG ++ 
Sbjct: 2   ISSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRTKLKNAKTGNVVEKTFRAGETVP 61

Query: 115 EANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 174
           +A + K   Q+TYKDG  FVFMD+ TYEE RL AA +GDR K+LKEGM+  V+ WNG+VI
Sbjct: 62  QAVLEKSTLQYTYKDGDDFVFMDMETYEEGRLTAATIGDRVKYLKEGMEANVITWNGQVI 121

Query: 175 DFEVPNTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQY 234
           + E+PN++ L V++ DPG+KGDTA GG+KPA +ETGA V VPLF++VG+ I +DTR   Y
Sbjct: 122 EVELPNSVVLEVIETDPGVKGDTATGGTKPAKVETGAQVMVPLFISVGERIKIDTRNDSY 181

Query: 235 TSR 238
             R
Sbjct: 182 LGR 184

[Close]

BLAST of CmaCh06G001890 vs. ExPASy Swiss-Prot
Match: B1XKV1 (Elongation factor P OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=efp PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 8.2e-62
Identity = 108/183 (59.02%), Postives = 142/183 (77.60%), Query Frame = 0


Query: 55  LTSNDIKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLD 114
           ++SND + GT+IE+DG  WRV+EFLHVKPGKG+AFVRTK++N  +G+ VE+TFRAG ++ 
Sbjct: 2   ISSNDFRTGTSIELDGSVWRVVEFLHVKPGKGSAFVRTKLKNAQTGSVVEKTFRAGETVP 61

Query: 115 EANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 174
           +A + K   Q TYK+G QFVFMD+ TYEE+RL  A +GDR K+L E M+  VLFWN +VI
Sbjct: 62  QAILDKRTMQHTYKEGEQFVFMDMETYEEVRLTEAQIGDRVKYLMEEMEVNVLFWNSQVI 121

Query: 175 DFEVPNTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQY 234
           D E+PNT+ L V + DPG+KGDTA GG+KPA + TGA VNVPLF+++G+ I +DTRT  Y
Sbjct: 122 DVELPNTVVLEVTETDPGVKGDTATGGTKPAIVSTGAQVNVPLFISIGERIKIDTRTDTY 181

Query: 235 TSR 238
             R
Sbjct: 182 LGR 184

[Close]

BLAST of CmaCh06G001890 vs. ExPASy Swiss-Prot
Match: B0JHV3 (Elongation factor P OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=efp PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-61
Identity = 107/183 (58.47%), Postives = 138/183 (75.41%), Query Frame = 0


Query: 55  LTSNDIKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLD 114
           ++SND + GT IE+DG  WRV+EFLHVKPGKG+AFVRTK++N  +GN VERTFRAG +L 
Sbjct: 2   ISSNDFRSGTTIEIDGSVWRVVEFLHVKPGKGSAFVRTKLKNVQTGNVVERTFRAGETLP 61

Query: 115 EANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 174
            A + K   Q TYK+G QFVFMD+ T+EE  L    +GDR K+LKEGM+  +LFWN +V+
Sbjct: 62  SATIEKRTMQHTYKEGDQFVFMDMETFEEATLTPVQMGDRAKYLKEGMEVNILFWNDQVL 121

Query: 175 DFEVPNTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQY 234
           D E+P ++ L + D DPG+KGDTA GG+KPA +ETGA V VPLF+++G+ I VDTR G Y
Sbjct: 122 DIELPTSVILEITDTDPGVKGDTATGGTKPAIVETGAQVMVPLFISIGERIKVDTRDGSY 181

Query: 235 TSR 238
             R
Sbjct: 182 LGR 184

[Close]

BLAST of CmaCh06G001890 vs. ExPASy Swiss-Prot
Match: Q8DJD3 (Elongation factor P OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=efp PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 6.5e-59
Identity = 104/183 (56.83%), Postives = 139/183 (75.96%), Query Frame = 0


Query: 55  LTSNDIKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLD 114
           ++SND + G +IE+DG  WRV+EFLHVKPGKG+AFVRTK++N  +GN +ERTFRAG ++ 
Sbjct: 2   ISSNDFRPGVSIELDGAVWRVVEFLHVKPGKGSAFVRTKLKNVQTGNVIERTFRAGETVP 61

Query: 115 EANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 174
           +A + K   Q TYKDG  +VFMD+ +YEE RL  A VGDR K+LKEGM+  ++ W  +V+
Sbjct: 62  QATLEKRTMQHTYKDGEDYVFMDMESYEEARLTPAQVGDRAKYLKEGMEVNIVKWGEQVL 121

Query: 175 DFEVPNTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQY 234
           + E+PN++ L VV  DPG+KGDTA GGSKPA +ETGA V VPLF++VG+ I +DTR+  Y
Sbjct: 122 EVELPNSVVLEVVQTDPGVKGDTATGGSKPAIVETGAQVMVPLFISVGERIRIDTRSDTY 181

Query: 235 TSR 238
             R
Sbjct: 182 LGR 184

[Close]

BLAST of CmaCh06G001890 vs. ExPASy TrEMBL
Match: A0A6J1I1D0 (uncharacterized protein LOC111470003 OS=Cucurbita maxima OX=3661 GN=LOC111470003 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.5e-127
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSSANSRTRFSRIYALTSNDI 60
           MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSSANSRTRFSRIYALTSNDI
Sbjct: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSSANSRTRFSRIYALTSNDI 60

Query: 61  KVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYK 120
           KVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYK
Sbjct: 61  KVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYK 120

Query: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPN 180
           EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPN
Sbjct: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPN 180

Query: 181 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239
           TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA
Sbjct: 181 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 238

[Close]

BLAST of CmaCh06G001890 vs. ExPASy TrEMBL
Match: A0A6J1FIJ6 (uncharacterized protein LOC111444251 OS=Cucurbita moschata OX=3662 GN=LOC111444251 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.6e-123
Identity = 233/239 (97.49%), Postives = 233/239 (97.49%), Query Frame = 0


Query: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRF-SSANSRTRFSRIYALTSND 60
           MADALLCNAS SSAFLARRSSS  SLSLSSKPSVLRTRRF SSANSRTRF RIYALTSND
Sbjct: 1   MADALLCNASFSSAFLARRSSSTASLSLSSKPSVLRTRRFSSSANSRTRFLRIYALTSND 60

Query: 61  IKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120
           IKVGTNIEVDG PWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY
Sbjct: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120

Query: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
           KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239
           NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA
Sbjct: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239

[Close]

BLAST of CmaCh06G001890 vs. ExPASy TrEMBL
Match: A0A1S3B5F0 (elongation factor P OS=Cucumis melo OX=3656 GN=LOC103486227 PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.4e-112
Identity = 212/238 (89.08%), Postives = 221/238 (92.86%), Query Frame = 0


Query: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSSANSRTRFSRIYALTSNDI 60
           MA  LLCNASL SAFLAR SSS TSLSL  K  V RT R SS +SRT F RIYALTSNDI
Sbjct: 1   MAGTLLCNASLVSAFLARTSSSKTSLSLPLKSPVFRTSRSSSPSSRTGFFRIYALTSNDI 60

Query: 61  KVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYK 120
           KVGTN+EVDG PWRVLEFLHVKPGKGAAFVRTKIRNYV+GNTVE+TFRAGSSL+EANVYK
Sbjct: 61  KVGTNLEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLEEANVYK 120

Query: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPN 180
           EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDC+VLFWNGKVIDFEVP 
Sbjct: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCVVLFWNGKVIDFEVPI 180

Query: 181 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239
           TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLF+NVGDSI++DTRTGQYTSRA
Sbjct: 181 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIMIDTRTGQYTSRA 238

[Close]

BLAST of CmaCh06G001890 vs. ExPASy TrEMBL
Match: A0A0A0LD89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728090 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.2e-110
Identity = 211/238 (88.66%), Postives = 220/238 (92.44%), Query Frame = 0


Query: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSSANSRTRFSRIYALTSNDI 60
           MA  LLCNAS +SAFLAR SSS TSLSL  KP  LR+    S +SRT F RIYALTSNDI
Sbjct: 1   MAGTLLCNASSASAFLARTSSSKTSLSLPLKPLALRS---FSPSSRTGFFRIYALTSNDI 60

Query: 61  KVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYK 120
           KVGTNIEVDG PWRVLEFLHVKPGKGAAFVRTKIRNYV+GNTVE+TFRAGSSL+EANVYK
Sbjct: 61  KVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLEEANVYK 120

Query: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPN 180
           EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 
Sbjct: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPI 180

Query: 181 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239
           TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVV+VPLF+NVGDSIV+DTRTGQYTSRA
Sbjct: 181 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVSVPLFINVGDSIVIDTRTGQYTSRA 235

[Close]

BLAST of CmaCh06G001890 vs. ExPASy TrEMBL
Match: A0A6J1DSR9 (uncharacterized protein LOC111024058 OS=Momordica charantia OX=3673 GN=LOC111024058 PE=3 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.2e-109
Identity = 205/238 (86.13%), Postives = 221/238 (92.86%), Query Frame = 0


Query: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSSANSRTRFSRIYALTSNDI 60
           MAD ++C+AS +SAFL RRSSS TSLSL  KPS+L  R+ S A+SR  FSRIYAL+SNDI
Sbjct: 1   MADIVVCSASSASAFLGRRSSSTTSLSLPFKPSLLPIRQVSLASSRPGFSRIYALSSNDI 60

Query: 61  KVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYK 120
           KVGTN+EVDG PWRVL  L VKPGKGAAFVRTK+RNYV+GNTVE+TFRAGSSLDEANVYK
Sbjct: 61  KVGTNVEVDGAPWRVLGCLXVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYK 120

Query: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPN 180
           EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 
Sbjct: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPI 180

Query: 181 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239
           T+QLTVV+VDPGLKGDTAQGGSKPATLETGAVVNVPLF+NVGDSIV+DTRTGQYTSRA
Sbjct: 181 TVQLTVVEVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 238

[Close]

BLAST of CmaCh06G001890 vs. NCBI nr
Match: XP_022971212.1 (uncharacterized protein LOC111470003 [Cucurbita maxima])

HSP 1 Score: 465.3 bits (1196), Expect = 3.1e-127
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSSANSRTRFSRIYALTSNDI 60
           MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSSANSRTRFSRIYALTSNDI
Sbjct: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSSANSRTRFSRIYALTSNDI 60

Query: 61  KVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYK 120
           KVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYK
Sbjct: 61  KVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYK 120

Query: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPN 180
           EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPN
Sbjct: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPN 180

Query: 181 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239
           TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA
Sbjct: 181 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 238

[Close]

BLAST of CmaCh06G001890 vs. NCBI nr
Match: KAG6596305.1 (hypothetical protein SDJN03_09485, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 453.4 bits (1165), Expect = 1.2e-123
Identity = 235/239 (98.33%), Postives = 235/239 (98.33%), Query Frame = 0


Query: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFS-SANSRTRFSRIYALTSND 60
           MADALLCNASLSSAFLARRSSSM SLSLSSKPSVLRTRRFS SANSRTRF RIYALTSND
Sbjct: 1   MADALLCNASLSSAFLARRSSSMASLSLSSKPSVLRTRRFSFSANSRTRFLRIYALTSND 60

Query: 61  IKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120
           IKVGTNIEVDG PWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY
Sbjct: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120

Query: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
           KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239
           NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA
Sbjct: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239

[Close]

BLAST of CmaCh06G001890 vs. NCBI nr
Match: XP_023538922.1 (uncharacterized protein LOC111799706 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 452.2 bits (1162), Expect = 2.8e-123
Identity = 234/239 (97.91%), Postives = 235/239 (98.33%), Query Frame = 0


Query: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRF-SSANSRTRFSRIYALTSND 60
           MADALLCNAS SSAFLARRSSSM SLSLSSKPSVLRTRRF SSANSRTRFSRIYALTSND
Sbjct: 1   MADALLCNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSND 60

Query: 61  IKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120
           IKVGTNIEVDG PWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY
Sbjct: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120

Query: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
           KEVKQFTYKDGSQFVFMDL+TYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLSTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239
           NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA
Sbjct: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239

[Close]

BLAST of CmaCh06G001890 vs. NCBI nr
Match: KAG7027859.1 (efp, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 450.3 bits (1157), Expect = 1.0e-122
Identity = 234/239 (97.91%), Postives = 234/239 (97.91%), Query Frame = 0


Query: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRF-SSANSRTRFSRIYALTSND 60
           MADALLCNASLSSAFLARRSSSM SLSLSSK SVLRTRRF SSANSRTRF RIYALTSND
Sbjct: 34  MADALLCNASLSSAFLARRSSSMASLSLSSKSSVLRTRRFSSSANSRTRFLRIYALTSND 93

Query: 61  IKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120
           IKVGTNIEVDG PWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY
Sbjct: 94  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 153

Query: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
           KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 154 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 213

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239
           NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA
Sbjct: 214 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 272

[Close]

BLAST of CmaCh06G001890 vs. NCBI nr
Match: XP_022938045.1 (uncharacterized protein LOC111444251 [Cucurbita moschata])

HSP 1 Score: 449.5 bits (1155), Expect = 1.8e-122
Identity = 233/239 (97.49%), Postives = 233/239 (97.49%), Query Frame = 0


Query: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRF-SSANSRTRFSRIYALTSND 60
           MADALLCNAS SSAFLARRSSS  SLSLSSKPSVLRTRRF SSANSRTRF RIYALTSND
Sbjct: 1   MADALLCNASFSSAFLARRSSSTASLSLSSKPSVLRTRRFSSSANSRTRFLRIYALTSND 60

Query: 61  IKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120
           IKVGTNIEVDG PWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY
Sbjct: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120

Query: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
           KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239
           NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA
Sbjct: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239

[Close]

BLAST of CmaCh06G001890 vs. TAIR 10
Match: AT3G08740.1 (elongation factor P (EF-P) family protein )

HSP 1 Score: 315.5 bits (807), Expect = 3.7e-86
Identity = 158/229 (69.00%), Postives = 186/229 (81.22%), Query Frame = 0


Query: 25  SLSLSSKPSV---LRTRRFSSAN-----------SRTRFSRIY-ALTSNDIKVGTNIEVD 84
           S+S SS PS+     T  FSS N              RF RI+ ++++NDIK GTNIEVD
Sbjct: 8   SVSCSSTPSLCIPYSTASFSSMNRLALPAVRISPRTNRFPRIHCSMSANDIKAGTNIEVD 67

Query: 85  GFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYKEVKQFTYKD 144
           G PWRVLEFLHVKPGKGAAFVRTKIRNYV+G+TVERTFRAG S++EAN+YKE KQFTYKD
Sbjct: 68  GAPWRVLEFLHVKPGKGAAFVRTKIRNYVNGSTVERTFRAGISVEEANIYKETKQFTYKD 127

Query: 145 GSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPNTIQLTVVDV 204
           GSQFVFMDL TYEE RLN +D+G++TKWLKEGMDCI+L+W  KVIDF++P T++L VVDV
Sbjct: 128 GSQFVFMDLTTYEETRLNESDMGEKTKWLKEGMDCILLYWKDKVIDFDLPITVKLKVVDV 187

Query: 205 DPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239
           DPGL+GDT QGGSKPAT+ETGA+V VPLF+NVG+ I VDTRTG Y +RA
Sbjct: 188 DPGLRGDTVQGGSKPATMETGAIVAVPLFINVGEEIFVDTRTGAYMNRA 236

[Close]

BLAST of CmaCh06G001890 vs. TAIR 10
Match: AT4G26310.1 (elongation factor P (EF-P) family protein )

HSP 1 Score: 93.6 bits (231), Expect = 2.3e-19
Identity = 51/180 (28.33%), Postives = 95/180 (52.78%), Query Frame = 0


Query: 60  IKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 119
           ++ G  IE  G  +RV+E  H + G+G A ++ ++R+  +GN +   F +  S+++  V+
Sbjct: 78  LRAGNVIERTGRTFRVVEAEHKQQGRGGASIQVELRDVDTGNKLNLRFGSEESVEK--VF 137

Query: 120 KEVKQFT--YKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFE 179
            E K FT  Y +G     ++ NT+E++ +     G    +LKE M   +  ++G+ +   
Sbjct: 138 VEEKSFTCLYAEGDTAYLIEPNTFEQVEVPLDIFGKAAVYLKEEMKVQLQLYDGRALSAS 197

Query: 180 VPNTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSR 238
           +P  I  TVV+    +KG T+    K A L+ G+ + VP ++  G+ IV++T    +  R
Sbjct: 198 IPKHITCTVVETQLPMKGLTSAPRYKRALLDNGSTIQVPSYLEAGEKIVINTEDDSFVKR 255

[Close]

BLAST of CmaCh06G001890 vs. TAIR 10
Match: AT4G26310.2 (elongation factor P (EF-P) family protein )

HSP 1 Score: 76.3 bits (186), Expect = 3.8e-14
Identity = 44/156 (28.21%), Postives = 82/156 (52.56%), Query Frame = 0


Query: 60  IKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 119
           ++ G  IE  G  +RV+E  H + G+G A ++ ++R+  +GN +   F +  S+++  V+
Sbjct: 78  LRAGNVIERTGRTFRVVEAEHKQQGRGGASIQVELRDVDTGNKLNLRFGSEESVEK--VF 137

Query: 120 KEVKQFT--YKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFE 179
            E K FT  Y +G     ++ NT+E++ +     G    +LKE M   +  ++G+ +   
Sbjct: 138 VEEKSFTCLYAEGDTAYLIEPNTFEQVEVPLDIFGKAAVYLKEEMKVQLQLYDGRALSAS 197

Query: 180 VPNTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVV 214
           +P  I  TVV+    +KG T+    K A L+ G+ +
Sbjct: 198 IPKHITCTVVETQLPMKGLTSAPRYKRALLDNGSTI 231

The following BLAST results are available for this feature:

BLAST of CmaCh06G001890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54760	1.6e-62	59.56	Elongation factor P OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=...	[more]
Q5N1T5	1.6e-62	59.56	Elongation factor P OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 14...	[more]
B1XKV1	8.2e-62	59.02	Elongation factor P OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) O...	[more]
B0JHV3	1.4e-61	58.47	Elongation factor P OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=efp...	[more]
Q8DJD3	6.5e-59	56.83	Elongation factor P OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=...	[more]

BLAST of CmaCh06G001890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I1D0	1.5e-127	100.00	uncharacterized protein LOC111470003 OS=Cucurbita maxima OX=3661 GN=LOC111470003...	[more]
A0A6J1FIJ6	8.6e-123	97.49	uncharacterized protein LOC111444251 OS=Cucurbita moschata OX=3662 GN=LOC1114442...	[more]
A0A1S3B5F0	1.4e-112	89.08	elongation factor P OS=Cucumis melo OX=3656 GN=LOC103486227 PE=3 SV=1	[more]
A0A0A0LD89	2.2e-110	88.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728090 PE=3 SV=1	[more]
A0A6J1DSR9	4.2e-109	86.13	uncharacterized protein LOC111024058 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of CmaCh06G001890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971212.1	3.1e-127	100.00	uncharacterized protein LOC111470003 [Cucurbita maxima]	[more]
KAG6596305.1	1.2e-123	98.33	hypothetical protein SDJN03_09485, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023538922.1	2.8e-123	97.91	uncharacterized protein LOC111799706 [Cucurbita pepo subsp. pepo]	[more]
KAG7027859.1	1.0e-122	97.91	efp, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022938045.1	1.8e-122	97.49	uncharacterized protein LOC111444251 [Cucurbita moschata]	[more]

BLAST of CmaCh06G001890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08740.1	3.7e-86	69.00	elongation factor P (EF-P) family protein	[more]
AT4G26310.1	2.3e-19	28.33	elongation factor P (EF-P) family protein	[more]
AT4G26310.2	3.8e-14	28.21	elongation factor P (EF-P) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001059	Translation elongation factor P/YeiP, central	SMART	SM01185	EFP_2	coord: 120..174 e-value: 3.1E-23 score: 93.2
IPR001059	Translation elongation factor P/YeiP, central	PFAM	PF01132	EFP	coord: 124..174 e-value: 1.2E-21 score: 76.4
IPR001059	Translation elongation factor P/YeiP, central	CDD	cd04470	S1_EF-P_repeat_1	coord: 124..179 e-value: 1.78027E-26 score: 95.6027
IPR015365	Elongation factor P, C-terminal	SMART	SM00841	Elong_fact_P_C_2	coord: 182..237 e-value: 2.0E-31 score: 120.4
IPR015365	Elongation factor P, C-terminal	PFAM	PF09285	Elong-fact-P_C	coord: 182..237 e-value: 1.7E-27 score: 95.0
IPR015365	Elongation factor P, C-terminal	CDD	cd05794	S1_EF-P_repeat_2	coord: 182..237 e-value: 3.16548E-27 score: 97.2094
None	No IPR available	GENE3D	2.40.50.140		coord: 118..180 e-value: 7.0E-22 score: 79.2
None	No IPR available	GENE3D	2.40.50.140		coord: 181..238 e-value: 2.6E-26 score: 93.0
None	No IPR available	PANTHER	PTHR30053:SF12	ELONGATION FACTOR P (EF-P) FAMILY PROTEIN	coord: 13..238
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 46..116 e-value: 1.0E-25 score: 91.0
IPR013185	Translation elongation factor, KOW-like	PFAM	PF08207	EFP_N	coord: 57..112 e-value: 1.8E-23 score: 82.3
IPR011768	Translation elongation factor P	TIGRFAM	TIGR00038	TIGR00038	coord: 56..238 e-value: 2.6E-72 score: 240.3
IPR011768	Translation elongation factor P	HAMAP	MF_00141	EF_P	coord: 54..238 score: 46.317825
IPR020599	Translation elongation factor P/YeiP	PANTHER	PTHR30053	ELONGATION FACTOR P	coord: 13..238
IPR013852	Translation elongation factor P/YeiP, conserved site	PROSITE	PS01275	EFP	coord: 203..222
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 50..114
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 119..182
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 181..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G001890.1	CmaCh06G001890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
biological_process	GO:0043043	peptide biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003746	translation elongation factor activity