CmaCh06G001870 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G001870
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr06: 958083 .. 963588 (+)
RNA-Seq Expression	CmaCh06G001870
Synteny	CmaCh06G001870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTGATTTACATGGTTTCACTGTAAACTTGTTTGTAGCTGTTTTGTTCATTTCCTTAAAGTGCCACTATACCATATTCATTTTCACCATGAAACATATTACATAGTGTTTCCATAAATTATACACTTACTTCAAACACCCTTTTGCACAAATCTAATTAGCGGTGGATTTGAACCCTTTTGCACAAATCTAATTAGAGGTGGATTTGAACGACTCACGATCATTCATATCACTTTTGTTCATAATGATAGGTTCAAATGTTGGAAGCAAAAGTATTCTATTCTTTTAACACATTTCTCGTCTTTTGGAAGATTTAGGAATAAGATTCTGATTTACATAATAGATATAGTCATAGTTTGCACTTAGTGCACTATTCCTAAATCTTCTAAAAGACGAGAAATGTGTTAAAAGAATGGAATACTTTTGCTTCTAAGATATTTGATTCTATCGTTAAGAACAAAAGTGGTATGAAAATCATTGTCAGTGGTTCGAATCCACTTCTAAATAAAGGGTTCAAATGATACATAGCTGAGAGCGAGCCAGATTCAGAAATGAAAATGAAAGAGGAAGTAAAATAAAATATGAACGCTCTTCTCCCTATTTCCGAGCTGCTTCGCTTGTGCACGAGAAGGCTCTTTGGCATCACCGAGATTGGAATTTGGTAGATTTTCTATAAAAAAAAGGGGGGGAAAAAGGTGATAATTAGTTAGATAGGTTAAGGAAATGAAATAGAGATTAGTTTTGAGTGGAGGGAGATGAAAAGAAGCAAAGAAAAGTAATGTTTTGCTTTATTTAAGTTCACCTGTGATTGAGATGTGGGCTTTGGAGTGCCATCTTTAGGAACAGCTCTCACTGCATCTATTGTTGCGATGCTAATGATACAACCAACTCATTCTCTCACTTTCACAGCAAAGCTTCCTTTGGCAGCCATGTTTCATAATTAAGACTTAGACGTCAAGTCTTTAGATAATTAAATGATTGTAGACCTGACATCCCTACTGAACTGTGAACCCCATTCCTATTCAAATTCAAATGCCTTTGATATAATCAATACCCCCATTCACATGCGGGTCCTCTCTTCAAAATGGTAATGCCTTTTCCTTCTTCAATATGATGTCAGGGACCCTTTTTTTATTTTGATTCCTTAATGCAGAGGCAATGAAATGTTCAACTTAAAGAAATGTTCAGGAGTTATTATGTATCATTATAATCCATAAAATCATGTTAGGAGTTGTTTTTTATCATTATAATCCATCCAAACTGAGGTGTAATTATAACAGCCTAAGTAGATATTGTGAGCTTTTCCTTTCGGAGCTTCTCCTCAAAGTTTTAACATGCTTGGAGAGGCTTCCAATGTTTTGTTTTTTTCTTCAACCAATGTTTGATCTCACAATTCACTCCCTAGGAGGCCCAACATCCTTGCTAGTGCACCGCTCGATGTCTGGCTCTGATACCAGTTGTAACAGCCAAAACTCACTGCTAACAGATATTATCCTATTTTGGCTTTCCCTTCAGGTTTTAAAACGTGTCTATTAGAGAGAGATTTCTACACCCTTATTAGGAATGATCCTCTTTTGGCTTTCCCTTGTCTATTAGAGAGAGATTTCTACACCCTTATCAGAAATGGTTCGTTCTCCTCTCCAACCAATATGGGATCTCAGACAGAAAAACTAACCTATAAAAGGAACCTTCCCAAGTGAATGAGTAGAGGAAAAGTGGTAATGCATATCCATAACTATAAAACAAGAGATATTGGAAAGCATCCAGAGAGCAGCTGAAACAATCGACGCAGTTATTTAGAAAATGAGAATTAATAAGCAAAAAAGAACAAACAACTTTATAAGAGCATAACGAAGGAAACAGAATTATTACATCAGCCTTCCCCTCTGCTCTTTTGCTTCAGTGAGAGACAAGAGCCCAATTGCACAGCTAACCCCGACATTCATCTAAAAGAAAAAACCACGCGAAGGTAAGATTCAGGCGTGACAATTCATGAGAGGTAATGCTTCCTGGTCATCAATACAAAAAATGTAATCCAGAAGAGTGTGCATTGTGTTATTTACGGTTCTCTTGGCAAGGTCTTGTAATGGCAGACACCATCATAATTTTACATGAACATTTATATTTTGTAAGCTATCATGTAAAAATATGGGAACTGTATTCTTAAAGTAGAAATTCAAAAAAGGAAAAAGGAAAAAGGAAAAAGGAAAAAGCATAAAGAGACATGCATTCTACATCCCACTAAAACAAACCCAAAAACTTGTATGGACCAGATCGCCTATTATGGCTTCTGACAGAGGATGAGATAGCTACAAATTCTATAATCTAATCAGAAATGGGAGGAAGGTTTACATTCAACCAGGGAATGACCTCAGTGGTAACATTATGTGCTTCACATTGTCCCCTTTCATGGTTGCTTGATTGTCGAGGGACCAGAAAGTTTTGTTCTCTTATGGTTGCTTGATTAACTAAACATCCCAATCATTCTCCCACCCATCTTTGTTGGGTCTAGCAGTAAGGCCATTAGCTGAAATGCTTCCAATATGGCGCCCCCCTGGCGATTTCACAGCGTTTTCTTCATCCCAGTCATCATCCCAACCCTGATCCCAACCTACGGCAGTTTCAACTTTGACAGCTGAGGAAGATTCTGGCAGTGCCATTTCAAGCTCTTGATATGGGATACCGCCTGCTTGTCTCCTCCTAAGCTTGAAGCAAGCCCAGGACCCCCCAAAGATTAGGACTGCAAGAATTAAGAAGTAAGCACCGTTGACTGGTGTTACTAGCTGGTCAAATGAAGGGAGATGCAGAAAAAGGTCTTCTCCAGCAACAAGAGGGCTTGTGTAAAGCACACATTCCCCATTTCCAGCATTTAATACTAATTTCATGTCTTTTAAGGTCGTCAGTGGAATGGTGATCTGAAAAATAATAGAACAGAGGACTGTAACGAATGGAAAAATAACTGGAACTAATATAGAATAGAACTTGATCTAATAATCTCACAGGACATACGCACAATAGAATGAATGAATTCAACAACCTGACCACAAAAAAAGAGTCATCACAAAATTTTGATACATAAGCTAAACCATTAAAATGTAGGGATTTTTCTTTGAACGGTTGGAGATGCAGACTTCATTTGAGAAGTGGATAAACAAAAATTTTTAACGATGCAACTGATACCTGAAAGTTTAATTGAATACATCAACTCTAACTGTGGTAAAGAAATTTGAAAAAAGTTACAAACAACATTCCCAAAAAATGAAGAAATAAAGAAACAATGGTAGTATAACATAAGGCCTAGCTGAAATTCGGGACAAAATAGGTTGAAATTACAAGCCCATACCCTTTTTGAATGATGTTTTAAAATCTTAAGCCCCTTGAAAAAGTTTCCTCCAGTAACATTCACATCTAGCGTATCTTCTCCTTTGTTCAGGACTAGAACAGCCAAATCTTTGGACTCTTCAACAAGGAAAAAGAAATAAATATAAGGTTTCATTGAGCATTAATATTAAACATATCAGAAATTAAGCAAAGTCAGTCAGTTTAAGAAACTCATCGACTCAACCCAAAAGTTACAAAGTGGTAAAAGCCATTCGGTTCCACCAAGTGAACATGCATTAAAGAAACCCTCAGAACATAGACATGAGGTCTCAATATTCAACCACTTATCAAAATCTCATGTTAACGGGCCAGTCCCAGGTTTCATACAGAAATAAGCATTAATTTAGGACATAATTTGGAAGTAGAAATTGCATTTCCTTCAATAGAATCATGTAAGAAATAAAATTCACAAACCAAAACAACGGGATACTAGCATCTGAAGGGACTCCGCATCAGTCACTTTACTAGTCAGACAAGAACGGACCGCAAGTTTGCTTAGATGTTATCCAAAAACAGATGTTCTAAAATGTGGTTCAAAAAAAAAAAAAAAAAACTGAACTGAATGAATTAACAAATACGAACAGGGTCAGATGCCAAAAAAATAGTAAAAACTAGATCTCAAGTGTCCAATTTTTTCTCTTCTTATCTACGTTACCATGTCATGATAACAAAAATAAAACATGTCAATTGCATTTTTGCTTCTCTTCAATAAAATTCTACACAATTGCAAGCATTTACTTTATGCTTAAAATTCAAGTCAAATATTGAGTTTGAGCTAGATAAATATGAAGTAAATATTTGAACAGGATACTGGGCGAGTCAGGTTTTAAAATATAATTAAGTCTTAATTTGGTTGGACCAACTAATTCGGTTATTTAGAAATTGGAGAGGCTAAAAATTCAAACAATGAGTATGAACTGACATAATGAAGGATTCCCGAATCTTGGAACTTTTTCCCGTGTGGTACTACAAATGCTAATGTTAGTGAAACATACTTGCACCCCATCCCTAAGAAAATTGATAGAAGAAATCACGAAGACTTCAGACCATAAGCCTTGCACGTATATACAAAGTTATCACAAAAGTTTTAGCAGAGAGGCTAAAATTACTCCTCATAACATTACTGAGCAAAAATTTTCATTATTAAGAGGGAAGGCAAAACATTGTCTCTTGCCTTATTGAAAATGAGCTCATAGGGAAGCAAATCCCACATCACCCTTTCTATTGTCTCTCATCACAGAATATTTTAGCAACTGTCGAAGGATGTTTTGTAATCCCAAATTAAATAAGGAAAATAGTCTACCTCCCTAATTTATCTTGTTGGATTTATTTAGATTTAGTTACCTAGTATCTAGGGATTATTATTTAGAATTATTGTTAACTAGAGATTTATTTAGATTTATCTCATCTCATTACCTATTATGTAATGATTTATTTAAATTACCTAGTATATAGGGAATTTAGATTGTCTATTGATTTAGACTTAATTAGCCTTTCTTCCTCTAAAAGGTCATGCAATTCTCTGAAAATTAATAAGAAAAAACAACAAGCTAATTTAGAGTTGCAACAGCAAGTAATACCTCCATAATCGTTGATGATACCATCCTATTCTCATCCATTTTGCATTCAGAGCTCTAAAATCTTTTGAAAGTTATGAAGGTTTCTGAAGCAGCCAAAGCCTTGGAATTGAATTCAACCTTGGAACGTCAACTATGTCGAGCTAAATTGTGAAGATCGTTAGTGCACAAACGAACCCTAATTTTTAATCATTCTTTTGGATTAATGGCCAAGTAACTACATTGGTTTTCCCTTAATGATGATCTAAAAATAATCTTCCTACTAAGGCCCAATTCTCAAGAAGATCCAATGGGAGATATCTCTTTTCTCCAAAAATGGCTGGCTCACCTTGATCCAAGCTTCTCTCTCAAGTAACTACGTTGGTCTTCCCTTACCTCTTATTTTATGTCTATTCTTAAAATGCAGAAGAGAGCATCTGAAGCAATTGAATTGAGGTCATTCGAAAAGTGCAGCTTATCACCTTGTGAGTTTGAAGGAAGTCTTACATTTGACTATCTGAGTCGAGCCCTTCTTGACAAACGCTCCAGGAATTCTGATGATTAG

mRNA sequence

ATGAGTTTGATTTACATGGTTTCACTAGGCAATGAAATGTTCAACTTAAAGAAATGTTCAGGAAAATTAAGCAAAGTCAGTCAGTTTAAGAAACTCATCGACTCAACCCAAAAGTTACAAAGTGGTAAAAGCCATTCGGTTCCACCAAGTGAACATGCATTAAAGAAACCCTCAGAACATAGACATGAGGTCTCAATATTCAACCACTTATCAAAATCTCATGTTAACGGGCCAGTCCCAGGATACTGGGCGAGTCAGAAGAGAGCATCTGAAGCAATTGAATTGAGGTCATTCGAAAAGTGCAGCTTATCACCTTGTGAGTTTGAAGGAAGTCTTACATTTGACTATCTGAGTCGAGCCCTTCTTGACAAACGCTCCAGGAATTCTGATGATTAG

Coding sequence (CDS)

ATGAGTTTGATTTACATGGTTTCACTAGGCAATGAAATGTTCAACTTAAAGAAATGTTCAGGAAAATTAAGCAAAGTCAGTCAGTTTAAGAAACTCATCGACTCAACCCAAAAGTTACAAAGTGGTAAAAGCCATTCGGTTCCACCAAGTGAACATGCATTAAAGAAACCCTCAGAACATAGACATGAGGTCTCAATATTCAACCACTTATCAAAATCTCATGTTAACGGGCCAGTCCCAGGATACTGGGCGAGTCAGAAGAGAGCATCTGAAGCAATTGAATTGAGGTCATTCGAAAAGTGCAGCTTATCACCTTGTGAGTTTGAAGGAAGTCTTACATTTGACTATCTGAGTCGAGCCCTTCTTGACAAACGCTCCAGGAATTCTGATGATTAG

Protein sequence

MSLIYMVSLGNEMFNLKKCSGKLSKVSQFKKLIDSTQKLQSGKSHSVPPSEHALKKPSEHRHEVSIFNHLSKSHVNGPVPGYWASQKRASEAIELRSFEKCSLSPCEFEGSLTFDYLSRALLDKRSRNSDD

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh06G001870 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G001870 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G001870 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G001870 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G001870.1	CmaCh06G001870.1	mRNA