CmaCh06G001060 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G001060
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Growth-regulating factor
Location	Cma_Chr06: 571655 .. 573792 (-)
RNA-Seq Expression	CmaCh06G001060
Synteny	CmaCh06G001060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCTCCACGCTGTCATCCCTCCTCCGATTCCCTCCCACCGGCTACCTCCTCTTCCGGTTGCCCCTTCTCTCCAGTGGTGCAGCAACTGCAAGTCATTAAATCCAAAGCCAACAAGAAAGATAAGAAAGTTCTTGGTCTTCTTCTTACACTCCTTCCCTCTTTTCCTCTGTGTTTGGTTCCCATTATTACAGTTCTAATTAGAGGCCATGAGAATCAGAAAGCGGCAGCTCCCATTAGCCTTCTCCTCTGACCCTCGCCCTGTCTCGGATCCCCTCCACGCCCACGCACACGCTCCTCCAAATCCCCACACTAATGCCATGGTCAGTAATCCAATACCCATCTCCTTCCTTGGTTTGCTCTTGATTTGGAAGGATTGACCCTCAAATTAAGGCCAACAAACGCCACAAATGCCTATCTACCACTCATCGCCTCTCTTTCTTTGTGCAGGAGAAGGAACAACAAGAAGACATTGAGGATAATACCAGGTAACAAAATTTATTGTTTTTTTTTTCAGAGGAGCACAAAGGAAAAACATGGCAAGTGGAACCACTGTTTGGATGTTTTTTTTAATGTGTTTTTCATTGCCTTTTGCCTCTCTATATGTTGTGCGCCCATGGGCTGCATGTTCTTCGCTGGTCCACTGCTCCTCTTTCATCTTTTTCACTTTTTTTCTTCCTTTTTTGTGCATTTTTTTTGGTTTTTGGTTTGGTTTTAGGGAGAGATGCGAGTTTGATTCGGAAACAAGCAATGGGGTTGTTCCACAATCCACCTCTTCACCTCAAGGTCTCACCTTTTTCTCATCATCCCACTCTTCTTTGTTCTTGTGTTGTTTGCCTTTCATCATTTGATGCACTAAATCATATCATTATCATTAGTAGATAGTAACTTTAGATCTCATGGAGTAATGTAACGAGAGCATCTGGGTTATTCTCGACTTATCGTTTTGTAGTGATTTGACATAATATCGTGGTGTAAAATCCTATATTTAACCTCGTGGAATGTTGTCGTTTTTTCCATAATTGATGTTAAGAGTAACTAGCTTGTTTCTATTATTTCTCTGCAAAGGCTTGACTTGTAGAGGGTAGTATTTCAAATCTATGTCGGAATTAGCCAGTGCAAAGATGATCATCGATACTGGGTGTTCGGATAATTCAGAGTCCACGGGAATTGTGGATCAGTTAGGGTAAGCTATGCGAAAAACCGTTGATTTTTGTCGGTTTCATAACAACTTGGACAAAATGGGGTTTTACAAAAAATGGTCTAGTATTTCGGGACGTGAGTTGTATCGTGATAACTTATAACGTTACTCGTTGGAGTACGTTTACTCATCTGGGTTTTGTGTTGGCCTATCAAAGTTCTAACCTTTTTAGAAAATTTGTAGCGTTCGTTTTGATTTGTTTTCGTGAGATCTCGTGGGAGACTTCCTCTGATCGCGATACATCATCACTTAGCTCATTTGAACGTGTGATCAAAAAAATTTATTTGTTCGAACTTGACAATTAAATCGAACATATCATGAGCTATGAACTTTAAGGTTTACAATTGAGTGATAGCTGAATTGGTTGTTTGTTGTAGTGGTGGGGCGGTGGGGCGAAAGCGAGAAGGAATTTCCATTAAAGAAGAGAAGAAGTGATGATCACAACAACAATGGAAACAAGAAGATGAAGAAGAAACAAGAAGAACACCAATCCAAAATAGGTCTCAACCTCGCCGGAAAAAGGAAATCGAGAGGCGGCGCTTTAATGGAGGGATCTCGGTGCAGCCGCGTCAATGGAAGAGGGTGGCGCTGCTGCCAACAGACCCTCGTTGGTTACTCTCTCTGTGAACATCACTTGGGAAAAGGTCGCCTCCGCAGCATGAACAGCGTCCGCAGCCGATCCTTGGCCACCACCGTCGTCGAGAAAGAAGATAACAAGAAGCCTTCTTCATCGCCATCCCCACGGCCACCATTGACATTGACTAGTAAGAAGAGAACGAATCTCGGTGTAGTGAAAGCAAGGTCGATAAGCAGCTTGCTCGGCAACCCGATGGCGTGATGGCGGTGGCACCACCTCCGCCTCTACCTCCTACACCGCCGGATGACAACATTGACGGTAAGAAATTATAATTTACTATTTAATCGATCCTTAATTTTTTA

mRNA sequence

CCCCTCCACGCTGTCATCCCTCCTCCGATTCCCTCCCACCGGCTACCTCCTCTTCCGGTTGCCCCTTCTCTCCAGTGGTGCAGCAACTGCAAGTCATTAAATCCAAAGCCAACAAGAAAGATAAGAAAGTTCTTGGTCTTCTTCTTACACTCCTTCCCTCTTTTCCTCTGTGTTTGGTTCCCATTATTACAGTTCTAATTAGAGGCCATGAGAATCAGAAAGCGGCAGCTCCCATTAGCCTTCTCCTCTGACCCTCGCCCTGTCTCGGATCCCCTCCACGCCCACGCACACGCTCCTCCAAATCCCCACACTAATGCCATGGAGAAGGAACAACAAGAAGACATTGAGGATAATACCAGGGAGAGATGCGAGTTTGATTCGGAAACAAGCAATGGGGTTGTTCCACAATCCACCTCTTCACCTCAAGTGGTGGGGCGGTGGGGCGAAAGCGAGAAGGAATTTCCATTAAAGAAGAGAAGAAGTGATGATCACAACAACAATGGAAACAAGAAGATGAAGAAGAAACAAGAAGAACACCAATCCAAAATAGGTCTCAACCTCGCCGGAAAAAGGAAATCGAGAGGCGGCGCTTTAATGGAGGGATCTCGGTGCAGCCGCGTCAATGGAAGAGGGTGGCGCTGCTGCCAACAGACCCTCGTTGGTTACTCTCTCTGTGAACATCACTTGGGAAAAGGTCGCCTCCGCAGCATGAACAGCGTCCGCAGCCGATCCTTGGCCACCACCGTCGTCGAGAAAGAAGATAACAAGAAGCCTTCTTCATCGCCATCCCCACGGCCACCATTGACATTGACTAGTAAGAAGAGAACGAATCTCGGTGTAGTGAAAGCAAGGTCGATAAGCAGCTTGCTCGGCAACCCGATGGCGTGATGGCGGTGGCACCACCTCCGCCTCTACCTCCTACACCGCCGGATGACAACATTGACGGTAAGAAATTATAATTTACTATTTAATCGATCCTTAATTTTTTA

Coding sequence (CDS)

ATGAGAATCAGAAAGCGGCAGCTCCCATTAGCCTTCTCCTCTGACCCTCGCCCTGTCTCGGATCCCCTCCACGCCCACGCACACGCTCCTCCAAATCCCCACACTAATGCCATGGAGAAGGAACAACAAGAAGACATTGAGGATAATACCAGGGAGAGATGCGAGTTTGATTCGGAAACAAGCAATGGGGTTGTTCCACAATCCACCTCTTCACCTCAAGTGGTGGGGCGGTGGGGCGAAAGCGAGAAGGAATTTCCATTAAAGAAGAGAAGAAGTGATGATCACAACAACAATGGAAACAAGAAGATGAAGAAGAAACAAGAAGAACACCAATCCAAAATAGGTCTCAACCTCGCCGGAAAAAGGAAATCGAGAGGCGGCGCTTTAATGGAGGGATCTCGGTGCAGCCGCGTCAATGGAAGAGGGTGGCGCTGCTGCCAACAGACCCTCGTTGGTTACTCTCTCTGTGAACATCACTTGGGAAAAGGTCGCCTCCGCAGCATGAACAGCGTCCGCAGCCGATCCTTGGCCACCACCGTCGTCGAGAAAGAAGATAACAAGAAGCCTTCTTCATCGCCATCCCCACGGCCACCATTGACATTGACTAGTAAGAAGAGAACGAATCTCGGTGTAGTGAAAGCAAGGTCGATAAGCAGCTTGCTCGGCAACCCGATGGCGTGA

Protein sequence

MRIRKRQLPLAFSSDPRPVSDPLHAHAHAPPNPHTNAMEKEQQEDIEDNTRERCEFDSETSNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLATTVVEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNPMA

Homology

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BLAST of CmaCh06G001060 vs. ExPASy Swiss-Prot
Match: Q6AWY1 (Growth-regulating factor 8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF8 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.5e-04
Identity = 21/57 (36.84%), Postives = 29/57 (50.88%), Query Frame = 0


Query: 126 GGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLATTVVE 183
           G A +E  RC R +G+ WRC +  +     CE H+ +GR RS   V  R    T+ E
Sbjct: 155 GCADVEPRRCRRTDGKKWRCSRDAVGDQKYCERHINRGRHRSRKHVEGRKATLTIAE 211

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BLAST of CmaCh06G001060 vs. ExPASy TrEMBL
Match: A0A6J1I679 (Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111470285 PE=3 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 2.2e-120
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MRIRKRQLPLAFSSDPRPVSDPLHAHAHAPPNPHTNAMEKEQQEDIEDNTRERCEFDSET 60
           MRIRKRQLPLAFSSDPRPVSDPLHAHAHAPPNPHTNAMEKEQQEDIEDNTRERCEFDSET
Sbjct: 1   MRIRKRQLPLAFSSDPRPVSDPLHAHAHAPPNPHTNAMEKEQQEDIEDNTRERCEFDSET 60

Query: 61  SNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNLAG 120
           SNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNLAG
Sbjct: 61  SNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNLAG 120

Query: 121 KRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLATTV 180
           KRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLATTV
Sbjct: 121 KRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLATTV 180

Query: 181 VEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNPMA 227
           VEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNPMA
Sbjct: 181 VEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNPMA 226

[Close]

BLAST of CmaCh06G001060 vs. ExPASy TrEMBL
Match: A0A6J1I3R9 (Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111470285 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 9.1e-114
Identity = 219/226 (96.90%), Postives = 219/226 (96.90%), Query Frame = 0


Query: 1   MRIRKRQLPLAFSSDPRPVSDPLHAHAHAPPNPHTNAMEKEQQEDIEDNTRERCEFDSET 60
           MRIRKRQLPLAFSSDPRPVSDPLHAHAHAPP       EKEQQEDIEDNTRERCEFDSET
Sbjct: 1   MRIRKRQLPLAFSSDPRPVSDPLHAHAHAPPK------EKEQQEDIEDNTRERCEFDSET 60

Query: 61  SNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNLAG 120
           SNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNLAG
Sbjct: 61  SNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNLAG 120

Query: 121 KRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLATTV 180
           KRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLATTV
Sbjct: 121 KRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLATTV 180

Query: 181 VEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNPMA 227
           VEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNPMA
Sbjct: 181 VEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNPMA 220

[Close]

BLAST of CmaCh06G001060 vs. ExPASy TrEMBL
Match: A0A6J1EWY8 (Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111436877 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.5e-103
Identity = 205/226 (90.71%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MRIRKRQ--LPLAFSSDPRPVSDPLHAHAHAPPNPHTNAMEKEQQEDIEDNTRERCEFDS 60
           MRIRKRQ  LPLAFSS PRPVSDPLHAHA   P   +N MEKEQQE IEDNTRERCEFD+
Sbjct: 1   MRIRKRQLPLPLAFSSGPRPVSDPLHAHA---PPTVSNPMEKEQQEHIEDNTRERCEFDA 60

Query: 61  ETSNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNL 120
           ETSNGVVPQSTSSPQVVGRWGE E+EFPLKKRRSDDHNNNGNKKMKKKQEEHQSK+GLNL
Sbjct: 61  ETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNL 120

Query: 121 AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLAT 180
           AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRS A 
Sbjct: 121 AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSSAA 180

Query: 181 TVVEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNP 225
           TVVEKEDNKKPS SPSPRPPLTLTSKKRT LGVVKARSISSLLG P
Sbjct: 181 TVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQP 223

[Close]

BLAST of CmaCh06G001060 vs. ExPASy TrEMBL
Match: A0A6J1EQU2 (Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111436877 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.1e-102
Identity = 204/226 (90.27%), Postives = 207/226 (91.59%), Query Frame = 0


Query: 1   MRIRKRQ--LPLAFSSDPRPVSDPLHAHAHAPPNPHTNAMEKEQQEDIEDNTRERCEFDS 60
           MRIRKRQ  LPLAFSS PRPVSDPL  HAHAPP       EKEQQE IEDNTRERCEFD+
Sbjct: 1   MRIRKRQLPLPLAFSSGPRPVSDPL--HAHAPPT------EKEQQEHIEDNTRERCEFDA 60

Query: 61  ETSNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNL 120
           ETSNGVVPQSTSSPQVVGRWGE E+EFPLKKRRSDDHNNNGNKKMKKKQEEHQSK+GLNL
Sbjct: 61  ETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNL 120

Query: 121 AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLAT 180
           AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRS A 
Sbjct: 121 AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSSAA 180

Query: 181 TVVEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNP 225
           TVVEKEDNKKPS SPSPRPPLTLTSKKRT LGVVKARSISSLLG P
Sbjct: 181 TVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQP 218

[Close]

BLAST of CmaCh06G001060 vs. ExPASy TrEMBL
Match: A0A6J1J4K8 (Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111481709 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 1.2e-57
Identity = 151/273 (55.31%), Postives = 176/273 (64.47%), Query Frame = 0


Query: 1   MRIRKRQLPLAFSS-DPRPVSDP-----------LHAHAHAPPNPH-----------TNA 60
           MRIRKRQ+PL+FSS  P P+SDP           L   +  PPN H            NA
Sbjct: 1   MRIRKRQVPLSFSSLSPLPLSDPLLRRTPPVQLHLQLPSSDPPNLHPYACDSAADHTNNA 60

Query: 61  MEKEQQEDIEDNTRERCEFDSETSNGVVPQSTSSPQV-VGRWGESEKEFPLKKRR----- 120
           + K+ Q +  D +RE   F +ETSNGV+P S+SSPQV  G+W E +KEFPLKKRR     
Sbjct: 61  LGKKDQLEQHD-SRETTVFGAETSNGVLPLSSSSPQVGDGQWCERDKEFPLKKRRGSFER 120

Query: 121 -SDDHNNNGNKK-----------MKKKQEEHQSKIGLNLAGKRKSRGGALMEGSRCSRVN 180
            SDD  NN + +            K  + + Q K+GLNLAGK++SRGGALMEGS CSRVN
Sbjct: 121 QSDDDQNNADDQTTTAMESLQDHKKTTKNKKQPKLGLNLAGKKRSRGGALMEGSLCSRVN 180

Query: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLAT--------TVVEKEDNKKPSS 225
           GRGWRCCQQTLVGYSLCEHHLGKGRLRSMN+VRSRSLA           V+K++ K P  
Sbjct: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRSRSLAAAAATLKNIVTVDKDEKKPPPC 240

[Close]

BLAST of CmaCh06G001060 vs. NCBI nr
Match: XP_022971610.1 (uncharacterized protein LOC111470285 isoform X1 [Cucurbita maxima])

HSP 1 Score: 441.4 bits (1134), Expect = 4.6e-120
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MRIRKRQLPLAFSSDPRPVSDPLHAHAHAPPNPHTNAMEKEQQEDIEDNTRERCEFDSET 60
           MRIRKRQLPLAFSSDPRPVSDPLHAHAHAPPNPHTNAMEKEQQEDIEDNTRERCEFDSET
Sbjct: 1   MRIRKRQLPLAFSSDPRPVSDPLHAHAHAPPNPHTNAMEKEQQEDIEDNTRERCEFDSET 60

Query: 61  SNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNLAG 120
           SNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNLAG
Sbjct: 61  SNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNLAG 120

Query: 121 KRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLATTV 180
           KRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLATTV
Sbjct: 121 KRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLATTV 180

Query: 181 VEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNPMA 227
           VEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNPMA
Sbjct: 181 VEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNPMA 226

[Close]

BLAST of CmaCh06G001060 vs. NCBI nr
Match: XP_022971611.1 (uncharacterized protein LOC111470285 isoform X2 [Cucurbita maxima])

HSP 1 Score: 419.5 bits (1077), Expect = 1.9e-113
Identity = 219/226 (96.90%), Postives = 219/226 (96.90%), Query Frame = 0


Query: 1   MRIRKRQLPLAFSSDPRPVSDPLHAHAHAPPNPHTNAMEKEQQEDIEDNTRERCEFDSET 60
           MRIRKRQLPLAFSSDPRPVSDPLHAHAHAPP       EKEQQEDIEDNTRERCEFDSET
Sbjct: 1   MRIRKRQLPLAFSSDPRPVSDPLHAHAHAPPK------EKEQQEDIEDNTRERCEFDSET 60

Query: 61  SNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNLAG 120
           SNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNLAG
Sbjct: 61  SNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNLAG 120

Query: 121 KRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLATTV 180
           KRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLATTV
Sbjct: 121 KRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLATTV 180

Query: 181 VEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNPMA 227
           VEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNPMA
Sbjct: 181 VEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNPMA 220

[Close]

BLAST of CmaCh06G001060 vs. NCBI nr
Match: XP_023521667.1 (uncharacterized protein LOC111785505 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.0 bits (998), Expect = 2.7e-104
Identity = 205/226 (90.71%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MRIRKRQ--LPLAFSSDPRPVSDPLHAHAHAPPNPHTNAMEKEQQEDIEDNTRERCEFDS 60
           MRIRKRQ  LPLAFSS PRPVSDPLHAHAHAPP      MEKEQQE IEDNTRERCEFD+
Sbjct: 1   MRIRKRQLPLPLAFSSGPRPVSDPLHAHAHAPP------MEKEQQEHIEDNTRERCEFDA 60

Query: 61  ETSNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNL 120
           ETSNGV+PQSTSSPQVVGRWGE E+EFPLKKRRSDDHNNNGNKKMKKKQEEHQSK+GLNL
Sbjct: 61  ETSNGVLPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNL 120

Query: 121 AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLAT 180
           AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRS   
Sbjct: 121 AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSSPA 180

Query: 181 TVVEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNP 225
           TVVEKEDNKKPS SPSPRPPLTLTSKKRT LGVVKARSISSLLG P
Sbjct: 181 TVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQP 220

[Close]

BLAST of CmaCh06G001060 vs. NCBI nr
Match: XP_022930465.1 (uncharacterized protein LOC111436877 isoform X1 [Cucurbita moschata])

HSP 1 Score: 385.6 bits (989), Expect = 3.0e-103
Identity = 205/226 (90.71%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MRIRKRQ--LPLAFSSDPRPVSDPLHAHAHAPPNPHTNAMEKEQQEDIEDNTRERCEFDS 60
           MRIRKRQ  LPLAFSS PRPVSDPLHAHA   P   +N MEKEQQE IEDNTRERCEFD+
Sbjct: 1   MRIRKRQLPLPLAFSSGPRPVSDPLHAHA---PPTVSNPMEKEQQEHIEDNTRERCEFDA 60

Query: 61  ETSNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNL 120
           ETSNGVVPQSTSSPQVVGRWGE E+EFPLKKRRSDDHNNNGNKKMKKKQEEHQSK+GLNL
Sbjct: 61  ETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNL 120

Query: 121 AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLAT 180
           AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRS A 
Sbjct: 121 AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSSAA 180

Query: 181 TVVEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNP 225
           TVVEKEDNKKPS SPSPRPPLTLTSKKRT LGVVKARSISSLLG P
Sbjct: 181 TVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQP 223

[Close]

BLAST of CmaCh06G001060 vs. NCBI nr
Match: XP_022930542.1 (uncharacterized protein LOC111436877 isoform X2 [Cucurbita moschata])

HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101
Identity = 204/226 (90.27%), Postives = 207/226 (91.59%), Query Frame = 0


Query: 1   MRIRKRQ--LPLAFSSDPRPVSDPLHAHAHAPPNPHTNAMEKEQQEDIEDNTRERCEFDS 60
           MRIRKRQ  LPLAFSS PRPVSDPL  HAHAPP       EKEQQE IEDNTRERCEFD+
Sbjct: 1   MRIRKRQLPLPLAFSSGPRPVSDPL--HAHAPPT------EKEQQEHIEDNTRERCEFDA 60

Query: 61  ETSNGVVPQSTSSPQVVGRWGESEKEFPLKKRRSDDHNNNGNKKMKKKQEEHQSKIGLNL 120
           ETSNGVVPQSTSSPQVVGRWGE E+EFPLKKRRSDDHNNNGNKKMKKKQEEHQSK+GLNL
Sbjct: 61  ETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNL 120

Query: 121 AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSLAT 180
           AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRS A 
Sbjct: 121 AGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSSAA 180

Query: 181 TVVEKEDNKKPSSSPSPRPPLTLTSKKRTNLGVVKARSISSLLGNP 225
           TVVEKEDNKKPS SPSPRPPLTLTSKKRT LGVVKARSISSLLG P
Sbjct: 181 TVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQP 218

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BLAST of CmaCh06G001060 vs. TAIR 10
Match: AT2G42040.1 (CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 6.0e-25
Identity = 104/269 (38.66%), Postives = 134/269 (49.81%), Query Frame = 0


Query: 1   MRIRKRQLPLAFSS-DPRPVSDPLHAHAHA-------------------------PPNPH 60
           MRIRKRQ+PL  SS  P P+SD     +                           PP+  
Sbjct: 1   MRIRKRQVPLPLSSLLPVPLSDLYFNRSPTATARYFRGGYKDGGDDFGSLQLSLPPPSQI 60

Query: 61  TNAM-------EKEQQEDIEDNTRE---RCEFDSETSNGVVP--QSTSSPQVVGRWGESE 120
           ++ +       +KE+ + ++D+  +   +   D+  S  V P  +S SS QVV +   +E
Sbjct: 61  SDRLIQRDLIKKKEEVKALDDDNGDVDVKSRTDASGSKNVNPRGESVSSIQVVEK---NE 120

Query: 121 KEFPLKKRRS----DDHNNNGNKKMKKKQEEHQSKIGLNLAGKRKSR--GGALMEGSRCS 180
           K   L+KRR     +D+ +       ++ EE     G    GK+K++  GG L EGSRCS
Sbjct: 121 KVVSLRKRRGFINFEDYED-------EEDEEASGGGGRINKGKKKAKKSGGGLEEGSRCS 180

Query: 181 RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSV---RSRSLATTVVEKEDNKKPSSSP 223
           RVNGRGWRCCQQTLVGYSLCEHHLGKGR+RSMN     R       VVE           
Sbjct: 181 RVNGRGWRCCQQTLVGYSLCEHHLGKGRVRSMNKSGGGRGGEKKAVVVE----------- 240

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BLAST of CmaCh06G001060 vs. TAIR 10
Match: AT5G53660.1 (growth-regulating factor 7 )

HSP 1 Score: 43.9 bits (102), Expect = 2.0e-04
Identity = 17/42 (40.48%), Postives = 25/42 (59.52%), Query Frame = 0


Query: 130 MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSV 172
           +E  RC R +G+ WRC ++ +  +  CE HL +GR RS   V
Sbjct: 108 LEPGRCRRTDGKKWRCAKEVVSNHKYCEKHLHRGRPRSRKHV 149

The following BLAST results are available for this feature:

BLAST of CmaCh06G001060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AWY1	2.5e-04	36.84	Growth-regulating factor 8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF8 PE=2...	[more]

BLAST of CmaCh06G001060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I679	2.2e-120	100.00	Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111470285 PE=3 SV=1	[more]
A0A6J1I3R9	9.1e-114	96.90	Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111470285 PE=3 SV=1	[more]
A0A6J1EWY8	1.5e-103	90.71	Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111436877 PE=3 SV=1	[more]
A0A6J1EQU2	6.1e-102	90.27	Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111436877 PE=3 SV=1	[more]
A0A6J1J4K8	1.2e-57	55.31	Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111481709 PE=3 SV=1	[more]

BLAST of CmaCh06G001060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971610.1	4.6e-120	100.00	uncharacterized protein LOC111470285 isoform X1 [Cucurbita maxima]	[more]
XP_022971611.1	1.9e-113	96.90	uncharacterized protein LOC111470285 isoform X2 [Cucurbita maxima]	[more]
XP_023521667.1	2.7e-104	90.71	uncharacterized protein LOC111785505 [Cucurbita pepo subsp. pepo]	[more]
XP_022930465.1	3.0e-103	90.71	uncharacterized protein LOC111436877 isoform X1 [Cucurbita moschata]	[more]
XP_022930542.1	1.3e-101	90.27	uncharacterized protein LOC111436877 isoform X2 [Cucurbita moschata]	[more]

BLAST of CmaCh06G001060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42040.1	6.0e-25	38.66	CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 ...	[more]
AT5G53660.1	2.0e-04	40.48	growth-regulating factor 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014977	WRC domain	PFAM	PF08879	WRC	coord: 131..171 e-value: 1.4E-15 score: 56.7
IPR014977	WRC domain	PROSITE	PS51667	WRC	coord: 129..173 score: 21.619141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..58
None	No IPR available	PANTHER	PTHR31602:SF19	OS02G0773600 PROTEIN	coord: 24..223
IPR031137	Growth-regulating factor	PANTHER	PTHR31602	FAMILY NOT NAMED	coord: 24..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G001060.1	CmaCh06G001060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding