Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAGTTTGCGAATGTCACCGAGTTTGTGAATGCTGGGTACTGGCTTGCGAGCACCGACGGCACGCTCCCGGCTGCCAACATCGACGCTACACTCTTCACCCATCTCTTCGCTGGCTACGCTCAACTCAACTCCGACACTTACCAAGTCACCGTTGATCCTTCACAGCTCATCCTCATCGATCAGTTTTCTTCCACCGTCAAACTCAGTAACCCTGGCGTCAAGACTCTGTTGTCCATTGCAGGAGACGCCGCCGTGTTCGCCGCAATGGCTGTAGACCCTACAAACCGCGATGCCTTCATCAAGTCCTCCATTGCTGCAGCCAGAGGCGGTGGGTTCGATGGCCTCGACCTCCAGTGGCTATACCCTTCTTCTCAGGACCAAATGGCCAACTTCAAAACTTTGATCCAGTCGTGGCACCAAGCGGTGGTGGATGATGCCACCAGTGTAAGCCTCCCGCAGCTGCTCCTGGTGGCCACGGTCTCCAATCTTCCGTATCTTCAGAACAACATTCAATACCCAGCTGATGCAATCACCCAAAATCTGGACTGGGTGAACCTCCTCTCTTATGACTTTTACACCCCTGACTCCTTCAGGGATGCCACCGGGCCATCCTCTGCCTTCCACAATCCGAAGGCCAATGCCCTTTCAGCTAATTTTGGGATCAGGTCGTGGGCGCAGAGCCTCAACAATCTGTCTCACAAGAAAATTGTGTTTGGAATTCCGTTCCATGGGTGGGCTTGGAAACTCGCCAACTCTCACCAGCACGCCCTGTTTGCTAAAGCGGATGGAGCGGCCAGCGGAGAATACATTGGTCCACACGGCCAAATCTTCTACTCCGATGTGCAGAAATTTATAGAGGACAATCAGGCTGGTGTTGAGGACAAGGACAAGAGCTATCTTGTTGCCTACGCTTATTATGAGACAACCTGGATTACCTTCGAAAGTGAATACACCGTTGCCGACAAGATTGCACTCGCAAAGGCCGACAAGGTGCTTGGTTACTTTGCTTTCAACATTGCAGCCGATGACGCTTCTAACACTCTTGCTAATGCCGCCAAATCCAATTGGTGA
mRNA sequence
ATGGCGGAGTTTGCGAATGTCACCGAGTTTGTGAATGCTGGGTACTGGCTTGCGAGCACCGACGGCACGCTCCCGGCTGCCAACATCGACGCTACACTCTTCACCCATCTCTTCGCTGGCTACGCTCAACTCAACTCCGACACTTACCAAGTCACCGTTGATCCTTCACAGCTCATCCTCATCGATCAGTTTTCTTCCACCGTCAAACTCAGTAACCCTGGCGTCAAGACTCTGTTGTCCATTGCAGGAGACGCCGCCGTGTTCGCCGCAATGGCTGTAGACCCTACAAACCGCGATGCCTTCATCAAGTCCTCCATTGCTGCAGCCAGAGGCGGTGGGTTCGATGGCCTCGACCTCCAGTGGCTATACCCTTCTTCTCAGGACCAAATGGCCAACTTCAAAACTTTGATCCAGTCGTGGCACCAAGCGGTGGTGGATGATGCCACCAGTGTAAGCCTCCCGCAGCTGCTCCTGGTGGCCACGGTCTCCAATCTTCCGTATCTTCAGAACAACATTCAATACCCAGCTGATGCAATCACCCAAAATCTGGACTGGGTGAACCTCCTCTCTTATGACTTTTACACCCCTGACTCCTTCAGGGATGCCACCGGGCCATCCTCTGCCTTCCACAATCCGAAGGCCAATGCCCTTTCAGCTAATTTTGGGATCAGGTCGTGGGCGCAGAGCCTCAACAATCTGTCTCACAAGAAAATTGTGTTTGGAATTCCGTTCCATGGGTGGGCTTGGAAACTCGCCAACTCTCACCAGCACGCCCTGTTTGCTAAAGCGGATGGAGCGGCCAGCGGAGAATACATTGGTCCACACGGCCAAATCTTCTACTCCGATGTGCAGAAATTTATAGAGGACAATCAGGCTGGTGTTGAGGACAAGGACAAGAGCTATCTTGTTGCCTACGCTTATTATGAGACAACCTGGATTACCTTCGAAAGTGAATACACCGTTGCCGACAAGATTGCACTCGCAAAGGCCGACAAGGTGCTTGGTTACTTTGCTTTCAACATTGCAGCCGATGACGCTTCTAACACTCTTGCTAATGCCGCCAAATCCAATTGGTGA
Coding sequence (CDS)
ATGGCGGAGTTTGCGAATGTCACCGAGTTTGTGAATGCTGGGTACTGGCTTGCGAGCACCGACGGCACGCTCCCGGCTGCCAACATCGACGCTACACTCTTCACCCATCTCTTCGCTGGCTACGCTCAACTCAACTCCGACACTTACCAAGTCACCGTTGATCCTTCACAGCTCATCCTCATCGATCAGTTTTCTTCCACCGTCAAACTCAGTAACCCTGGCGTCAAGACTCTGTTGTCCATTGCAGGAGACGCCGCCGTGTTCGCCGCAATGGCTGTAGACCCTACAAACCGCGATGCCTTCATCAAGTCCTCCATTGCTGCAGCCAGAGGCGGTGGGTTCGATGGCCTCGACCTCCAGTGGCTATACCCTTCTTCTCAGGACCAAATGGCCAACTTCAAAACTTTGATCCAGTCGTGGCACCAAGCGGTGGTGGATGATGCCACCAGTGTAAGCCTCCCGCAGCTGCTCCTGGTGGCCACGGTCTCCAATCTTCCGTATCTTCAGAACAACATTCAATACCCAGCTGATGCAATCACCCAAAATCTGGACTGGGTGAACCTCCTCTCTTATGACTTTTACACCCCTGACTCCTTCAGGGATGCCACCGGGCCATCCTCTGCCTTCCACAATCCGAAGGCCAATGCCCTTTCAGCTAATTTTGGGATCAGGTCGTGGGCGCAGAGCCTCAACAATCTGTCTCACAAGAAAATTGTGTTTGGAATTCCGTTCCATGGGTGGGCTTGGAAACTCGCCAACTCTCACCAGCACGCCCTGTTTGCTAAAGCGGATGGAGCGGCCAGCGGAGAATACATTGGTCCACACGGCCAAATCTTCTACTCCGATGTGCAGAAATTTATAGAGGACAATCAGGCTGGTGTTGAGGACAAGGACAAGAGCTATCTTGTTGCCTACGCTTATTATGAGACAACCTGGATTACCTTCGAAAGTGAATACACCGTTGCCGACAAGATTGCACTCGCAAAGGCCGACAAGGTGCTTGGTTACTTTGCTTTCAACATTGCAGCCGATGACGCTTCTAACACTCTTGCTAATGCCGCCAAATCCAATTGGTGA
Protein sequence
MAEFANVTEFVNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLILIDQFSSTVKLSNPGVKTLLSIAGDAAVFAAMAVDPTNRDAFIKSSIAAARGGGFDGLDLQWLYPSSQDQMANFKTLIQSWHQAVVDDATSVSLPQLLLVATVSNLPYLQNNIQYPADAITQNLDWVNLLSYDFYTPDSFRDATGPSSAFHNPKANALSANFGIRSWAQSLNNLSHKKIVFGIPFHGWAWKLANSHQHALFAKADGAASGEYIGPHGQIFYSDVQKFIEDNQAGVEDKDKSYLVAYAYYETTWITFESEYTVADKIALAKADKVLGYFAFNIAADDASNTLANAAKSNW
Homology
BLAST of CmaCh05G012520 vs. ExPASy Swiss-Prot
Match:
O81862 (Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1)
HSP 1 Score: 263.5 bits (672), Expect = 3.6e-69
Identity = 153/353 (43.34%), Postives = 208/353 (58.92%), Query Frame = 0
Query: 11 VNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLILIDQFSSTVKL 70
V A YW +++ P +ID++LFTHLF +A LNS T QVTV + F+ TV+
Sbjct: 28 VKASYWFPASE--FPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQR 87
Query: 71 SNPGVKTLLSIAG---DAAVFAAMAVDPTNRDAFIKSSIAAARGGGFDGLDLQWLYPSSQ 130
NP VKTLLSI G D +A+MA +PT+R +FI SSI AR GF GLDL W YPSS
Sbjct: 88 RNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSA 147
Query: 131 DQMANFKTLIQSWHQAVVDDATSVSLPQLLLVATV--SNLPYLQNNIQYPADAITQNLDW 190
+M NF TL++ W AVV +A+S P+LLL A V SN Y ++ YP A+ +LDW
Sbjct: 148 TEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYY---SVLYPVSAVASSLDW 207
Query: 191 VNLLSYDFYTPDSFRDATGPSSAFHNPKANALSANFGIRSWAQSLNNLSHKKIVFGIPFH 250
VNL++YDFY P R TGP +A +P S + G RSW Q+ L KK V G P++
Sbjct: 208 VNLMAYDFYGPGWSR-VTGPPAALFDPSNAGPSGDAGTRSWIQA--GLPAKKAVLGFPYY 267
Query: 251 GWAWKLANSHQHALFAKADGAASGEYIGPHGQIFYSDVQKFIEDNQAGVEDKDKSYLVAY 310
G+AW+L N++ H+ +A GAA I P G I Y ++KFI DN A + + + Y
Sbjct: 268 GYAWRLTNANSHSYYAPTTGAA----ISPDGSIGYGQIRKFIVDNGA-TTVYNSTVVGDY 327
Query: 311 AYYETTWITFESEYTVADKIALAKADKVLGYFAFNIAADDASNTLANAAKSNW 359
Y T WI ++ ++ K+ AK +LGYF++++ ADD S L+ AA W
Sbjct: 328 CYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSG-LSRAASQAW 366
BLAST of CmaCh05G012520 vs. ExPASy Swiss-Prot
Match:
A0A072UR65 (Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1)
HSP 1 Score: 185.3 bits (469), Expect = 1.2e-45
Identity = 116/350 (33.14%), Postives = 184/350 (52.57%), Query Frame = 0
Query: 15 YWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLILIDQFSSTVKLSNPG 74
YWL + P +D +LFTH+F + N+ TY++ + SQ++ ++ F+ T K +P
Sbjct: 39 YWLENP--FFPPTTVDTSLFTHIFYSFLTPNNITYKLEISSSQILSLNTFTKTFKTKSPP 98
Query: 75 VKTLLSIAG---DAAVFAAMAVDPTNRDAFIKSSIAAARGGGFDGLDLQWLYPSSQDQMA 134
TL SI G ++++ A +A DP AFI S+I AR GFDG+DL W +P + +M
Sbjct: 99 AATLFSIGGAGSNSSLLAFIASDPPACAAFINSTIDVARTFGFDGIDLDWEFPKNTKEMN 158
Query: 135 NFKTLIQSWHQAVVDDATSVSLPQLLLVATV---SNLPYLQNNIQYPADAITQNLDWVNL 194
+ ++ W +A+ D+ + P LLL A V N YP ++I +NLDWVN+
Sbjct: 159 DLGEMLFQWRKAISDEGATTGRPPLLLTAAVYFAVNFSIYGEPRMYPVNSINENLDWVNV 218
Query: 195 LSYDFYTPDSFRDATGPSSAFHNPKANALSANFGIRSWAQSLNNLSHKKIVFGIPFHGWA 254
+SY+ P S + TG S +PK+N +S G+ SW S + +K+V G+P +G +
Sbjct: 219 MSYELRGPRS--NKTGAPSGTFDPKSN-VSVVSGLLSWIHS--GVVPEKLVMGMPLYGKS 278
Query: 255 WKLANSHQHALFAKADGAASGEYIGPHGQIFYSDVQKFIEDNQAGVEDKDKSYLVAYAYY 314
WKL + + H + A + G+ G +G + Y V F A VE D Y+Y
Sbjct: 279 WKLRDPNVHGIGAPSVGSGP----GVNGLMAYFQVLDFNRQKSAKVE-YDVDTASVYSYS 338
Query: 315 ETTWITFESEYTVADKIALAKADKVLGYFAFNIAADDASNTLANAAKSNW 359
+TWI +++ +TV+ K+ A+A K+ GYF + D +A A W
Sbjct: 339 GSTWIGYDNPFTVSIKVGFAQALKLRGYFFWVAGLDTLDWKIATQASKAW 376
BLAST of CmaCh05G012520 vs. ExPASy Swiss-Prot
Match:
U5N4E3 (Nod factor hydrolase protein 1 OS=Medicago truncatula OX=3880 GN=NFH1 PE=1 SV=2)
HSP 1 Score: 176.8 bits (447), Expect = 4.4e-43
Identity = 123/361 (34.07%), Postives = 184/361 (50.97%), Query Frame = 0
Query: 8 TEFVNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLILI----DQ 67
T V YW+ + P ++ID +LFTH+F + N TY++ + +
Sbjct: 34 TTRVKGIYWIENP--LFPPSSIDTSLFTHIFYAFVSPNKFTYKLEEEEEDSTTVATSLTT 93
Query: 68 FSSTVKLSNPGVKTLLSIAG---DAAVFAAMAVDPTNRDAFIKSSIAAARGGGFDGLDLQ 127
F++T K P + TLLSI G ++ +FA +A DPT R FI S+I AR GFDG+D
Sbjct: 94 FTNTFKTKTPPIPTLLSIGGATSNSTLFAFIASDPTARATFINSTIQVARTFGFDGIDFD 153
Query: 128 WLYPSSQDQMANFKTLIQSWHQAVVDDATSVSLPQLLLVATV---SNLPYLQNNIQYPAD 187
W +P++ +M + L+ W +A+ D+ S S P LLL A V N YP D
Sbjct: 154 WEFPTTTKEMNDLGELLFQWRRAISDETASTSRPPLLLTAAVYFAVNFFLSGERRMYPVD 213
Query: 188 AITQNLDWVNLLSYDFYTPDSFRDATGPSSAFHNPKANALSANFGIRSWAQSLNNLSHKK 247
+I +NLDWVN++SYD S + TG S + K+N +S G+ SW + ++ +K
Sbjct: 214 SINKNLDWVNVMSYDLRGSGS--NVTGAPSGMFDSKSN-VSVVSGLFSWIR--GGVAPEK 273
Query: 248 IVFGIPFHGWAWKLANSHQHALFAKADGAASGEYIGPHGQIFYSDVQKFIEDNQAGVEDK 307
IV G+P +G +WKL + + H + A G G G + Y V F + A V
Sbjct: 274 IVMGMPLYGKSWKLQDPNVHGIGAPNVGPGP----GVDGGMAYFQVVDFNKQMGAKVV-Y 333
Query: 308 DKSYLVAYAYYETTWITFESEYTVADKIALAKADKVLGYFAFNIAADDASNTLANAAKSN 359
DK Y+Y +TWI ++ +TV+ K+ A+A K+ GYF F A D S+ + A
Sbjct: 334 DKETGSVYSYSGSTWIGYDDPFTVSVKVGFAQALKLGGYF-FWAAGYDTSDWKVSTASKA 381
BLAST of CmaCh05G012520 vs. ExPASy Swiss-Prot
Match:
A0A1B1J8Z2 (Class V chitinase CHIT5 OS=Lotus japonicus OX=34305 GN=CHIT5 PE=1 SV=2)
HSP 1 Score: 158.3 bits (399), Expect = 1.6e-37
Identity = 109/355 (30.70%), Postives = 188/355 (52.96%), Query Frame = 0
Query: 11 VNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLILIDQFSSTVKL 70
V A YW A +D ++ID FTH++ + Q +++ + + S ++ +
Sbjct: 55 VRAAYWPAWSD--FSTSSIDTNYFTHIYYAFVQPAPESFNLEITESYKKWAPKYDGIHNI 114
Query: 71 SNPGVKTLLSIAG---DAAVFAAMAVDPTNRDAFIKSSIAAARGGGFDGLDLQWLYPSSQ 130
P V TLLSI G +A +F+ MA NR +FI S+I AR F+GLDL W +P +
Sbjct: 115 -RPRVTTLLSIGGGGNNATLFSEMASSKQNRASFINSTIHVARKHEFNGLDLDWEWPGDE 174
Query: 131 DQMANFKTLIQSWHQAVVDDATSVSLPQLLLVATV---SNLPYLQNNIQ-YPADAITQNL 190
M+N L++ W++A+V +A + +LLL + V S + + N + YP AI + L
Sbjct: 175 KDMSNLALLLKEWYKALVVEANTSRKSRLLLTSAVYFNSTISLIGNGPRSYPVRAIRKYL 234
Query: 191 DWVNLLSYDFYTPDSFRDATGPSSAFHNPKANALSANFGIRSWAQSLNNLSHKKIVFGIP 250
DW + + +D+ ++ + TG ++A ++P +N +S +GI SW S + +K+V G+P
Sbjct: 235 DWASPMCFDY--NGAWANETGFNAALYDPNSN-ISTKYGIGSWIGS--GVPAEKLVMGLP 294
Query: 251 FHGWAWKLANSHQHALFAKADGAASGEYIGPHGQIFYSDVQKFIEDNQAGVEDKDKSYLV 310
+G AW+L + + H + AKA G A + G + Y ++ F +D A V D+ +
Sbjct: 295 LYGRAWELKDPNDHGVGAKAVGPA----VDTDGSMDYDEILVFNKDTGAKVV-YDEVAVS 354
Query: 311 AYAYYETTWITFESEYTVADKIALAKADKVLGYFAFNIAADDASNTLANAAKSNW 359
Y+Y TTWI ++ ++ K+ A++ + GYF + I D T++ A + W
Sbjct: 355 FYSYSGTTWIGYDDGPSITKKVQFARSMGLKGYFFWAI-GKDKDWTISKQASNAW 395
BLAST of CmaCh05G012520 vs. ExPASy Swiss-Prot
Match:
A0A072VEP0 (Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1)
HSP 1 Score: 151.0 bits (380), Expect = 2.6e-35
Identity = 105/360 (29.17%), Postives = 185/360 (51.39%), Query Frame = 0
Query: 11 VNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLILIDQFSSTVKL 70
V + YW A D + ID FTH+ + Q ++++ + S + F ++
Sbjct: 40 VRSAYWPAGDD--FSPSLIDTNYFTHILLAFIQPEPISFKLEITKSGIKWGQNFIKALRH 99
Query: 71 SNPGVKTLLSIAG---DAAVFAAMAVDPTNRDAFIKSSIAAARGGGFDGLDLQWLYPSSQ 130
+P VKTLLSI G ++ +F+ +A NR+ FI S+I AR FDG+DL W +P +Q
Sbjct: 100 RSPPVKTLLSIGGGGSNSTLFSEIASTKQNREIFINSTIEVARKYRFDGVDLDWEFPETQ 159
Query: 131 DQMANFKTLIQSWHQAVVDDATSVSLPQLLLVATVSNLPYLQNNIQ---------YPADA 190
M N L + W+ A+ +A P+LLL + V Y + ++ YP A
Sbjct: 160 QDMFNLGLLYEEWYNALFAEAKVRRKPRLLLTSAV----YYNSTVRLIGKHGPRSYPTQA 219
Query: 191 ITQNLDWVNLLSYDFYTPDSFRDATGPSSAFHNPKANALSANFGIRSWAQSLNNLSHKKI 250
I + LDW + + +D++ ++ + T ++A ++ K+ +S NFG+ SW +S + +K+
Sbjct: 220 INKYLDWASPMCFDYH--GTWDNNTDFNAALYDSKSE-ISTNFGLHSWIKS--GVRPEKL 279
Query: 251 VFGIPFHGWAWKLANSHQHALFAKADGAASGEYIGPHGQIFYSDVQKFIEDNQAGVEDKD 310
V G+ +G AW+L + + + + A+A G A+ G + Y+++ KF + + A V D
Sbjct: 280 VMGLALYGRAWELKDPNVNGVGAEAVGPAT----DTDGSMNYNEILKFNKQSGANVV-YD 339
Query: 311 KSYLVAYAYYETTWITFESEYTVADKIALAKADKVLGYFAFNIAADDASNTLANAAKSNW 359
K + Y+Y TTWI ++ ++ K+ AK+ + GYF F D +++ A + W
Sbjct: 340 KVAISFYSYAGTTWIGYDDGPSITTKVRFAKSLGLKGYF-FWALGKDKDWSISKQASNAW 382
BLAST of CmaCh05G012520 vs. TAIR 10
Match:
AT4G19810.1 (Glycosyl hydrolase family protein with chitinase insertion domain )
HSP 1 Score: 263.5 bits (672), Expect = 2.5e-70
Identity = 153/353 (43.34%), Postives = 208/353 (58.92%), Query Frame = 0
Query: 11 VNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLILIDQFSSTVKL 70
V A YW +++ P +ID++LFTHLF +A LNS T QVTV + F+ TV+
Sbjct: 28 VKASYWFPASE--FPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQR 87
Query: 71 SNPGVKTLLSIAG---DAAVFAAMAVDPTNRDAFIKSSIAAARGGGFDGLDLQWLYPSSQ 130
NP VKTLLSI G D +A+MA +PT+R +FI SSI AR GF GLDL W YPSS
Sbjct: 88 RNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSA 147
Query: 131 DQMANFKTLIQSWHQAVVDDATSVSLPQLLLVATV--SNLPYLQNNIQYPADAITQNLDW 190
+M NF TL++ W AVV +A+S P+LLL A V SN Y ++ YP A+ +LDW
Sbjct: 148 TEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYY---SVLYPVSAVASSLDW 207
Query: 191 VNLLSYDFYTPDSFRDATGPSSAFHNPKANALSANFGIRSWAQSLNNLSHKKIVFGIPFH 250
VNL++YDFY P R TGP +A +P S + G RSW Q+ L KK V G P++
Sbjct: 208 VNLMAYDFYGPGWSR-VTGPPAALFDPSNAGPSGDAGTRSWIQA--GLPAKKAVLGFPYY 267
Query: 251 GWAWKLANSHQHALFAKADGAASGEYIGPHGQIFYSDVQKFIEDNQAGVEDKDKSYLVAY 310
G+AW+L N++ H+ +A GAA I P G I Y ++KFI DN A + + + Y
Sbjct: 268 GYAWRLTNANSHSYYAPTTGAA----ISPDGSIGYGQIRKFIVDNGA-TTVYNSTVVGDY 327
Query: 311 AYYETTWITFESEYTVADKIALAKADKVLGYFAFNIAADDASNTLANAAKSNW 359
Y T WI ++ ++ K+ AK +LGYF++++ ADD S L+ AA W
Sbjct: 328 CYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSG-LSRAASQAW 366
BLAST of CmaCh05G012520 vs. TAIR 10
Match:
AT4G19820.1 (Glycosyl hydrolase family protein with chitinase insertion domain )
HSP 1 Score: 239.2 bits (609), Expect = 5.1e-63
Identity = 139/350 (39.71%), Postives = 198/350 (56.57%), Query Frame = 0
Query: 1 MAEFANVTEFVNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLIL 60
+ F++ V A YW A ++ P A ID++LFTHLF +A +N+ TYQV V
Sbjct: 16 LLRFSSAQTVVKATYWFAESES--PLAQIDSSLFTHLFCAFADINTLTYQVIVSSRNKPK 75
Query: 61 IDQFSSTVKLSNPGVKTLLSIAGDAA---VFAAMAVDPTNRDAFIKSSIAAARGGGFDGL 120
F+ TV+ NP VKTLLSI GD FA+MA +PT+R FI SSI AR GF GL
Sbjct: 76 FSTFTQTVRRRNPTVKTLLSIGGDFTYNFAFASMASNPTSRKLFISSSIKLARSCGFHGL 135
Query: 121 DLQWLYPSSQDQMANFKTLIQSWHQAVVDDATSVSLPQLLLVATVSNLPYLQNNIQYPAD 180
DL W YPS +M NF L++ W AV +A S P+LLL A V Y ++ +P +
Sbjct: 136 DLNWKYPSITTEMDNFGKLLREWRLAVEAEARSSGKPRLLLTAAVF-YSYSYYSVLHPVN 195
Query: 181 AITQNLDWVNLLSYDFYTPDSFRDATGPSSAFHNPKANALSANFGIRSWAQSLNNLSHKK 240
A+ +LDWVNL++YDFY S R P + ++P S + G+R+W Q+ L KK
Sbjct: 196 AVADSLDWVNLVAYDFYESGSSRVTCSP-APLYDPITTGPSGDAGVRAWTQA--GLPAKK 255
Query: 241 IVFGIPFHGWAWKLANSHQHALFAKADGAASGEYIGPHGQIFYSDVQKFIEDNQAGVEDK 300
V G P +G+AW L ++ H +A + G A I P G I Y +++FI DN+A +
Sbjct: 256 AVLGFPLYGYAWCLTDAKNHNYYANSSGPA----ISPDGSIGYDQIRRFIVDNKATMV-Y 315
Query: 301 DKSYLVAYAYYETTWITFESEYTVADKIALAKADKVLGYFAFNIAADDAS 348
+ + + Y Y + TWI ++ ++ K+ AK +LGYF+++I ADD S
Sbjct: 316 NSNLVQNYCYAKKTWIGYDDNQSIVMKVKYAKQRGLLGYFSWHIGADDNS 354
BLAST of CmaCh05G012520 vs. TAIR 10
Match:
AT4G19750.1 (Glycosyl hydrolase family protein with chitinase insertion domain )
HSP 1 Score: 231.1 bits (588), Expect = 1.4e-60
Identity = 135/346 (39.02%), Postives = 191/346 (55.20%), Query Frame = 0
Query: 3 EFANVTEFVNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLILID 62
+F V A YW+ + PA NID+T FTHLF +A ++S T++VT+ + +
Sbjct: 6 QFLRTNSIVKASYWVVKPENDFPAGNIDSTRFTHLFCAFADVDSSTHEVTISAANSCQVS 65
Query: 63 QFSSTVKLSNPGVKTLLSIAG---DAAVFAAMAVDPTNRDAFIKSSIAAARGGGFDGLDL 122
F+ TVK N V+TLLSI G D AV A+MA + NR AFI SSI AR F GLDL
Sbjct: 66 SFTHTVKDKNTDVQTLLSIGGKDADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDL 125
Query: 123 QWLYPSSQDQMANFKTLIQSWHQAVVDDATSVSLPQLLLVATVSNLPYLQNNIQYPADAI 182
W YPS+ +MANF L++ W AVV+++ + LLL A V P +YP AI
Sbjct: 126 AWEYPSNDVEMANFGKLVKEWRAAVVEESDRTNQLPLLLTAAVYYSPDYYGE-EYPVQAI 185
Query: 183 TQNLDWVNLLSYDFYTPDSFRDATGPSSAFHNPKANA-LSANFGIRSWAQSLNNLSHKKI 242
NLD+VN+++YDFY P + TGP +A +P A S + G+ W ++ L KK
Sbjct: 186 ADNLDFVNIMAYDFYGP-GWSPVTGPPAALFDPSNPAGRSGDSGLSKWLEA--KLPAKKA 245
Query: 243 VFGIPFHGWAWKLANSHQHALFAKADGAASGEYIGPHGQIFYSDVQKFIEDNQAGVEDKD 302
V G + GWAW L ++ + A DGAA I G I Y+ ++ +I DN A D
Sbjct: 246 VLGFSYCGWAWTLEDAENNGYDAATDGAA----ISSDGSITYAKIRNYIIDNGAAT-FHD 305
Query: 303 KSYLVAYAYYETTWITFESEYTVADKIALAKADKVLGYFAFNIAAD 345
+ + Y Y TTWI ++ ++ K+ AK +LGYF++++ AD
Sbjct: 306 PAVIGFYCYVGTTWIGYDDNQSIVSKVRYAKLKGLLGYFSWHVGAD 342
BLAST of CmaCh05G012520 vs. TAIR 10
Match:
AT4G19800.1 (Glycosyl hydrolase family protein with chitinase insertion domain )
HSP 1 Score: 230.7 bits (587), Expect = 1.8e-60
Identity = 134/346 (38.73%), Postives = 199/346 (57.51%), Query Frame = 0
Query: 8 TEFVNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLILIDQFSST 67
++ V A YW +TD PA +ID++LFTHLF +A L +++Y++T+ F+ T
Sbjct: 4 SDVVKASYWFPATD--FPATDIDSSLFTHLFCTFADLEAESYEITIATWNQAPFHAFTET 63
Query: 68 VKLSNPGVKTLLSIAG---DAAVFAAMAVDPTNRDAFIKSSIAAARGGGFDGLDLQWLYP 127
V+ NP VKTLLSI G D FA+MA +P +R +FI+S+I AR GF GLDL W YP
Sbjct: 64 VQQRNPHVKTLLSIGGGNADKDAFASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYP 123
Query: 128 SSQDQMANFKTLIQSWHQAVVDDATSVSLPQLLLVATVSNLPYLQNNIQ---YPADAITQ 187
++++M +F L++ W AV ++ S L+L A V Y +N Q YP AI+
Sbjct: 124 RNEEEMYDFGKLLEEWRSAVEAESNSSGTTALILTAAV----YYSSNYQGVPYPVLAISN 183
Query: 188 NLDWVNLLSYDFYTPDSFRDATGPSSAFHNPKANALSANFGIRSWAQSLNNLSHKKIVFG 247
+LDW+NL++YDFY P + TGP ++ + P + S + G+R W ++ L KK V G
Sbjct: 184 SLDWINLMAYDFYGP-GWSTVTGPPASLYLP-TDGRSGDSGVRDWTEA--GLPAKKAVLG 243
Query: 248 IPFHGWAWKLANSHQHALFAKADGAASGEYIGPHGQIFYSDVQKFIEDNQAGVEDKDKSY 307
P++GWAW LA+ + A G A I G+I Y +Q +I DN A + D
Sbjct: 244 FPYYGWAWTLADPDVNGYDANTTGPA----ISDDGEISYRQLQTWIVDNGA-TKVHDDMM 303
Query: 308 LVAYAYYETTWITFESEYTVADKIALAKADKVLGYFAFNIAADDAS 348
+ Y Y TTWI ++SE ++ K+ AK +LGYF++++ DD S
Sbjct: 304 VGDYCYAGTTWIGYDSEKSIVTKVIYAKQKGLLGYFSWHVGGDDNS 334
BLAST of CmaCh05G012520 vs. TAIR 10
Match:
AT4G19760.1 (Glycosyl hydrolase family protein with chitinase insertion domain )
HSP 1 Score: 229.2 bits (583), Expect = 5.3e-60
Identity = 144/370 (38.92%), Postives = 201/370 (54.32%), Query Frame = 0
Query: 3 EFANVTEFVNAGYWLAS---------TDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTV 62
+F V A YW + GT P++ ID+TLFTHLF +A ++S T++VT+
Sbjct: 6 QFLRTNSIVKASYWFPDGKSQSPECLSQGT-PSSFIDSTLFTHLFCAFADVDSSTHEVTI 65
Query: 63 DPSQLILIDQFSSTVKLSNPGVKTLLSIAG---DAAVFAAMAVDPTNRDAFIKSSIAAAR 122
+ F+ TVK N V+TLLSI G D AV A+MA + NR AFI SSI AR
Sbjct: 66 SAANSYQFSSFTETVKEKNTDVQTLLSIGGKDADKAVLASMASNSKNRKAFIDSSIDIAR 125
Query: 123 GGGFDGLDLQWLYPSSQDQMANFKTLIQSWHQAVVDDATSVSLPQLLLVATVSNLPYLQN 182
F GLDL W YPS+ +M NF L++ W AVV+++ + LLL A V P +
Sbjct: 126 KKDFYGLDLAWEYPSNDVEMTNFGKLLEEWRAAVVEESDKTNQLPLLLTAAVYYSPQ-YD 185
Query: 183 NIQYPADAITQNLDWVNLLSYDFYTPDSFRDATGPSSA-FHNPKANA-LSANFGIRSWAQ 242
++YP AI NLD+VN+++YDFY P + TGP +A FH+P A S N G+R W
Sbjct: 186 GVEYPVKAIADNLDFVNIMAYDFYGP-GWSPVTGPPAALFHDPSNPAGRSGNSGLRKWLD 245
Query: 243 SLNNLSHKKIVFGIPFHGWAWKLANSHQHALFAKADGAASGEYIGPHGQIFYSDVQKFIE 302
L KK V G P+ GWAW L ++ + A DGAA I P G I Y+ ++ +I
Sbjct: 246 EA-KLPPKKAVLGFPYCGWAWTLEDAENNGYDAATDGAA----ISPDGSITYAKIRNYIV 305
Query: 303 DNQAGVEDKDKSYLVAYAYYETTWITFESEYTVADKIALAKADKVLGYFAFNIAADDASN 359
DN A D + + Y Y TWI ++ ++ K+ AK +LGYF++++ A D +
Sbjct: 306 DNGAAT-FHDPAVIGFYCYVGNTWIGYDDNQSIVYKVKYAKFTGLLGYFSWHVGA-DYNC 365
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O81862 | 3.6e-69 | 43.34 | Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1 | [more] |
A0A072UR65 | 1.2e-45 | 33.14 | Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1 | [more] |
U5N4E3 | 4.4e-43 | 34.07 | Nod factor hydrolase protein 1 OS=Medicago truncatula OX=3880 GN=NFH1 PE=1 SV=2 | [more] |
A0A1B1J8Z2 | 1.6e-37 | 30.70 | Class V chitinase CHIT5 OS=Lotus japonicus OX=34305 GN=CHIT5 PE=1 SV=2 | [more] |
A0A072VEP0 | 2.6e-35 | 29.17 | Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G19810.1 | 2.5e-70 | 43.34 | Glycosyl hydrolase family protein with chitinase insertion domain | [more] |
AT4G19820.1 | 5.1e-63 | 39.71 | Glycosyl hydrolase family protein with chitinase insertion domain | [more] |
AT4G19750.1 | 1.4e-60 | 39.02 | Glycosyl hydrolase family protein with chitinase insertion domain | [more] |
AT4G19800.1 | 1.8e-60 | 38.73 | Glycosyl hydrolase family protein with chitinase insertion domain | [more] |
AT4G19760.1 | 5.3e-60 | 38.92 | Glycosyl hydrolase family protein with chitinase insertion domain | [more] |