CmaCh05G011320 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G011320
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Lipoxygenase
Location	Cma_Chr05: 8866374 .. 8869243 (+)
RNA-Seq Expression	CmaCh05G011320
Synteny	CmaCh05G011320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGATGGCGTTGTCGAGAAAACTCAATATCCCTCTAAATATTCAATGGAGATGTCTTCGTTTGCTTACCGAAGTTGGAATTTCACTCAACAAGCACTTCGTTGATCTAATCCATAGGTAACATGATATCATAAGTTCTTCTTGGTTTACTAGCTTCCTAGAGATATAAATAGAGATATAAATTGATGTAGTTCTCTTGATTTGTGATACGTTTAGAGGAGTTGCTATTGAGGATCCAGGCGCCCCACATGGACTCCGATTACTAACAGCGGACTATCCATATGCTGTTGATGGACTTGACATTTGGGCAGCCATCAAGACATGGGTACTAGATTATTGCTCACTCTACTACGAGAATGATGAAATGATTCGTAATGATTAAGAGCTCCAATCATGGTGGAAGGAGGTTCGAGAAAGGGGCGATGAAGATAAGAAAGACGAACCATGGTGGCCAAGGATGGAGAGCGTTGAAGAACTAATCAACAGTTGCACGATTATCATATGGATTTCTTCGGCTCTTCATGCTGCAGTTAACTTTGGACAATACCCTTATGGTGGTTTCCTTCCCAACCGACCGTCTCTTAGCAAAAGATTCTTACCTGAAGAAGGGACGTCTGAGTATCTAGAGCTGCAGTCTAATCCCGAAAAAGTTTTCATGAAAACAATCACTTCGAAATTACTAGAAGTTGATATTTTAAATATCTCAACGACTATCCACGCATTCTCAAGACGAGTCCTTTTTAGGGGAAAGAAGGGATCCAAATTGGACTTTTGATCAAGAGGCTTTAAATAGGCATTTGAGAGATTTAATAAACAGCTTGTTGAAATTGAAACGATGATAGCGGAAAGAAACCAAAACTTCACGTTGAAGAATCATGTTGGACGACCCATGAGCATGGCGTACACTTTACTACTTCCTACCAGTAAAGATGGGATTACGATGCGAGGAATTCCCAACAGCATTTCTATTCGAATACCTATAGCTTGGTTATGGGTATGGGTTTGTGTTTAGTTCTTGGTTTTATTTTATCTACTCATTCGAACATCGAGTTTTGCTTTCTTTCTTAGATCAAGTTTTCAGATAAAGATTTTCGAATAGCACTCTCAAGACCAATGATGAAACAAGGAACTTTTAGAGTGATATGAAATTGTCCACTTCAGGCATAAGTCCTTTATTTATATACCCATAATCTTTCTCTTAGTTAGCCAATGTGAGACTCTAACAATTCTAAACAATCACATCCAAATACGAGTGATTATGAGCATATGATAGCAAAGAAGTGCTTTAAAATAATTCATTGTTACTAATTATACCAATAAGGTGCACCTTCGTTACTTTAAAAGAATTGATAGTTCATAACTATATCATCGAAGTACACCTTCCTTTTTGGTGGCTTATTCATAAGAACTCCAAAGTTAAGGTTGCTTAGTTTGGGACAATGTATTTTGGGTGACCTCCTATAACTTTTTCTAGAAAACATGTGAATAAAGACAAATCATGCTAAAAGAATCCGTGTTGGCTTATGATATAACTTTTTCTAGAAAACATGTGAATAAAGACAAATCATGCTAAAAGAATCCGTGTTGGCTTATGAGGATAGTTGTCAATCTATTAAGCAGTTCAAATCAAGAGCTAACAGGATCACAAGGAAATGTTAGGGTCATAATCTCATCATAATCTCAGGAAGAAAAAAGCCATACTTTCCTGATTTTAACATAATTTACTCAAATATCATTGCTTCAAATACTTATTGAACATACTGCATTTTATTGAACATACTTCACTTGATTGAACATAATTTACCGTACTTTAGTGAATGATAATAGCCACTTCTGTGTACCTTATTCAAAGAAGAGGCTTAAATGGAGATGCTGTTGGGAATTCCTCTCCCTGAAAGCCCTTCATCACCAGATGATGGATAGAGCAAAGTGTAGGGCATCAGGACTGGTCCAGCTCTGTTTTTCAATGTCAAATCTTCATTTCTTTTGGTAATTGCTTCTTCGATCTCAGCCAACTTTTTCCCGAACTTCTCGAACACTTCGAGTGGTACTTTGTCTGTAGTCCACTCAGGGGAGTCTCTTCGGCCAAGATAGACCTCATCAGACGAATGCCTCGACAAAATCTCTATCAACGAGACACTGAGAAGAGTTTGTACTTGCGCAGTGATAGTTCTTAAGAAGGCTTTATCGGGATCTGATTCAAGTTCTTTATACTCGGGAGTGCCTTCTTCTGGCATGAACTTGCGACTTATAGTCGGTCGATTGGGAAGATAACCTGCATAAGGGTATTGTCCAAAGTTCACTGCAGCATGAAGAGCCGAAGCAATCCATATAATGATAGTACATGTGTCTATTAACTCAGAAATATTCTGCATTTTAGGCCACCACGGTTCATCTTTCTTGTCACCATGACCTTTCTCCCTAAGTTCCTTCCACCAAGACTGAAGTTCCGAGTCATCCCGCACGGTTTCATCAGTCTTGTAATAGTAAGAACAATAATCTGTAACCCATGTCTTGATCGCTGACCAGATCTCGAGTCCATCGACAGCATATGGATAATCCTCAATTGCGAGACGAACTCCATGTGGAGAATTTGAATCCTCAATTGCCATTCCTCTAAATGAACCAAAGATCATGAGAAAGTTATACGACTAGTTTGCAAAGTATCAGGACATTGTATGAAAAAGAAAACCCTCCTTAACCAGACTAATGCTCAATAACAAATGCTACCATGAATATGTTACCTCTTGATGAGATCTGCAGGGAGCGCTTGTTCAAGAAAAACCCAGTCCTTATATAGAACAGCTGACATCTCCATGGAATATTTGGACGGAAGAACTGTTGCTTCCAAAAGGCCACCTGCATTAA

mRNA sequence

ATGCTGATGGCGTTGTCGAGAAAACTCAATATCCCTCTAAATATTCAATGGAGATGTCTTCGTTTGCTTACCGAAGTTGGAATTTCACTCAACAAGCACTTCGTTGATCTAATCCATAGAGGAGTTGCTATTGAGGATCCAGGCGCCCCACATGGACTCCGATTACTAACAGCGGACTATCCATATGCTGTTGATGGACTTGACATTTGGGCAGCCATCAAGACATGGGTACTAGATTATTGCTCACTCTACTACGAGAATGATGAAATGATTCAGCTCCAATCATGGTGGAAGGAGGTTCGAGAAAGGGGCGATGAAGATAAGAAAGACGAACCATGGTGGCCAAGGATGGAGAGCGTTGAAGAACTAATCAACAGTTGCACGATTATCATATGGATTTCTTCGGCTCTTCATGCTGCAGTTAACTTTGGACAATACCCTTATGGTGGTTTCCTTCCCAACCGACCGTCTCTTAGCAAAAGATTCTTACCTGAAGAAGGGACGTCTGAGTATCTAGAGCTGCAGTCTAATCCCGAAAAAGCATTTGAGAGATTTAATAAACAGCTTGTTGAAATTGAAACGATGATAGCGGAAAGAAACCAAAACTTCACGTTGAAGAATCATGTTGGACGACCCATGAGCATGGCGTACACTTTACTACTTCCTACCAGTAAAGATGGGATTACGATGCGAGGAATTCCCAACAGCATTTCTATTCGAATACCTATAGCTTGGTTATGGGTATGGGGAGCGCTTGTTCAAGAAAAACCCAGTCCTTATATAGAACAGCTGACATCTCCATGGAATATTTGGACGGAAGAACTGTTGCTTCCAAAAGGCCACCTGCATTAA

Coding sequence (CDS)

ATGCTGATGGCGTTGTCGAGAAAACTCAATATCCCTCTAAATATTCAATGGAGATGTCTTCGTTTGCTTACCGAAGTTGGAATTTCACTCAACAAGCACTTCGTTGATCTAATCCATAGAGGAGTTGCTATTGAGGATCCAGGCGCCCCACATGGACTCCGATTACTAACAGCGGACTATCCATATGCTGTTGATGGACTTGACATTTGGGCAGCCATCAAGACATGGGTACTAGATTATTGCTCACTCTACTACGAGAATGATGAAATGATTCAGCTCCAATCATGGTGGAAGGAGGTTCGAGAAAGGGGCGATGAAGATAAGAAAGACGAACCATGGTGGCCAAGGATGGAGAGCGTTGAAGAACTAATCAACAGTTGCACGATTATCATATGGATTTCTTCGGCTCTTCATGCTGCAGTTAACTTTGGACAATACCCTTATGGTGGTTTCCTTCCCAACCGACCGTCTCTTAGCAAAAGATTCTTACCTGAAGAAGGGACGTCTGAGTATCTAGAGCTGCAGTCTAATCCCGAAAAAGCATTTGAGAGATTTAATAAACAGCTTGTTGAAATTGAAACGATGATAGCGGAAAGAAACCAAAACTTCACGTTGAAGAATCATGTTGGACGACCCATGAGCATGGCGTACACTTTACTACTTCCTACCAGTAAAGATGGGATTACGATGCGAGGAATTCCCAACAGCATTTCTATTCGAATACCTATAGCTTGGTTATGGGTATGGGGAGCGCTTGTTCAAGAAAAACCCAGTCCTTATATAGAACAGCTGACATCTCCATGGAATATTTGGACGGAAGAACTGTTGCTTCCAAAAGGCCACCTGCATTAA

Protein sequence

MLMALSRKLNIPLNIQWRCLRLLTEVGISLNKHFVDLIHRGVAIEDPGAPHGLRLLTADYPYAVDGLDIWAAIKTWVLDYCSLYYENDEMIQLQSWWKEVRERGDEDKKDEPWWPRMESVEELINSCTIIIWISSALHAAVNFGQYPYGGFLPNRPSLSKRFLPEEGTSEYLELQSNPEKAFERFNKQLVEIETMIAERNQNFTLKNHVGRPMSMAYTLLLPTSKDGITMRGIPNSISIRIPIAWLWVWGALVQEKPSPYIEQLTSPWNIWTEELLLPKGHLH

Homology

[Close]

BLAST of CmaCh05G011320 vs. ExPASy Swiss-Prot
Match: Q43191 (Probable linoleate 9S-lipoxygenase 5 OS=Solanum tuberosum OX=4113 GN=LOX1.5 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.0e-70
Identity = 133/256 (51.95%), Postives = 171/256 (66.80%), Query Frame = 0


Query: 36  DLIHRGVAIEDPGAPHGLRLLTADYPYAVDGLDIWAAIKTWVLDYCSLYYENDEMI---- 95
           DLI RGVA+ED  +PHG+RLL  DYPYAVDGL+IW+AIK+WV +YC+ YY++DE++    
Sbjct: 608 DLIKRGVAVEDSSSPHGVRLLIQDYPYAVDGLEIWSAIKSWVTEYCNFYYKSDELVLKDN 667

Query: 96  QLQSWWKEVRERGDEDKKDEPWWPRMESVEELINSCTIIIWISSALHAAVNFGQYPYGGF 155
           +LQ+WWKE+RE G  DKKDEPWWP+M++ +EL +SCTIIIWI+SALHAAVNFGQYPY G+
Sbjct: 668 ELQAWWKELREEGHGDKKDEPWWPKMQTRQELKDSCTIIIWIASALHAAVNFGQYPYAGY 727

Query: 156 LPNRPSLSKRFLPEEGTSEYLELQSNPEK------------------------------- 215
           LPNRP+LS+RF+PE GT EY EL++NP+K                               
Sbjct: 728 LPNRPTLSRRFMPEPGTPEYEELKTNPDKAYLKTITPQLQTLLGISLIEILSRHASDEIY 787

Query: 216 -----------------AFERFNKQLVEIETMIAERNQNFTLKNHVGRPMSMAYTLLLPT 240
                            AFERF K+L EIE  I + N +   KN  G P+++ YTLL PT
Sbjct: 788 LGQRDSSEWTKDQEPIAAFERFGKKLSEIEDQIIQMNGDKKWKNRSG-PVNVPYTLLFPT 847

[Close]

BLAST of CmaCh05G011320 vs. ExPASy Swiss-Prot
Match: P37831 (Linoleate 9S-lipoxygenase 1 OS=Solanum tuberosum OX=4113 GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.8e-69
Identity = 133/256 (51.95%), Postives = 167/256 (65.23%), Query Frame = 0


Query: 36  DLIHRGVAIEDPGAPHGLRLLTADYPYAVDGLDIWAAIKTWVLDYCSLYYENDEMI---- 95
           DL+ RGVA+ED  +PHG+RLL  DYPYAVDGL+IW+AIK+WV DYCS YY +DE I    
Sbjct: 607 DLVKRGVAVEDSSSPHGVRLLIEDYPYAVDGLEIWSAIKSWVTDYCSFYYGSDEEILKDN 666

Query: 96  QLQSWWKEVRERGDEDKKDEPWWPRMESVEELINSCTIIIWISSALHAAVNFGQYPYGGF 155
           +LQ+WWKE+RE G  DKK+EPWWP ME+ +ELI+SCT IIWI+SALHAAVNFGQYPY G+
Sbjct: 667 ELQAWWKELREVGHGDKKNEPWWPEMETPQELIDSCTTIIWIASALHAAVNFGQYPYAGY 726

Query: 156 LPNRPSLSKRFLPEEGTSEYLELQSNPEK------------------------------- 215
           LPNRP++S+RF+PE GT EY EL+ NP+K                               
Sbjct: 727 LPNRPTVSRRFMPEPGTPEYEELKRNPDKAFLKTITAQLQTLLGVSLVEILSRHTTDEIY 786

Query: 216 -----------------AFERFNKQLVEIETMIAERNQNFTLKNHVGRPMSMAYTLLLPT 240
                            AF+RF K+L +IE  I +RN +  L N  G P++  YTLL PT
Sbjct: 787 LGQRESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSG-PVNAPYTLLFPT 846

[Close]

BLAST of CmaCh05G011320 vs. ExPASy Swiss-Prot
Match: Q41238 (Linoleate 9S-lipoxygenase 6 (Fragment) OS=Solanum tuberosum OX=4113 GN=LOX1.6 PE=1 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.8e-69
Identity = 132/256 (51.56%), Postives = 167/256 (65.23%), Query Frame = 0


Query: 36  DLIHRGVAIEDPGAPHGLRLLTADYPYAVDGLDIWAAIKTWVLDYCSLYYENDEMI---- 95
           DL+ RGVA+ED  +PHG+RLL  DYPYAVDGL+IW+AIK+WV DYCS YY +DE I    
Sbjct: 603 DLVKRGVAVEDSSSPHGVRLLIEDYPYAVDGLEIWSAIKSWVTDYCSFYYGSDEEILKDN 662

Query: 96  QLQSWWKEVRERGDEDKKDEPWWPRMESVEELINSCTIIIWISSALHAAVNFGQYPYGGF 155
           +LQ+WWKE+RE G  DKK+EPWWP ME+ +ELI+SCT IIWI+SALHAAVNFGQYPY G+
Sbjct: 663 ELQAWWKELREVGHGDKKNEPWWPEMETPQELIDSCTTIIWIASALHAAVNFGQYPYAGY 722

Query: 156 LPNRPSLSKRFLPEEGTSEYLELQSNPEK------------------------------- 215
           LPNRP++S+RF+PE GT EY EL+ NP+K                               
Sbjct: 723 LPNRPTVSRRFMPEPGTPEYEELKKNPDKAFLKTITAQLQTLLGVSLIEILSRHTTDEIY 782

Query: 216 -----------------AFERFNKQLVEIETMIAERNQNFTLKNHVGRPMSMAYTLLLPT 240
                            AF++F K+L +IE  I +RN +  L N  G P++  YTLL PT
Sbjct: 783 LGQRESPEWTKDKEPLAAFDKFGKKLTDIEKQIIQRNGDNILTNRSG-PVNAPYTLLFPT 842

[Close]

BLAST of CmaCh05G011320 vs. ExPASy Swiss-Prot
Match: Q43190 (Probable linoleate 9S-lipoxygenase 4 OS=Solanum tuberosum OX=4113 GN=LOX1.4 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.2e-69
Identity = 132/256 (51.56%), Postives = 167/256 (65.23%), Query Frame = 0


Query: 36  DLIHRGVAIEDPGAPHGLRLLTADYPYAVDGLDIWAAIKTWVLDYCSLYYENDEMI---- 95
           DL+ RGVA+ED  +PHG+RLL  DYPYAVDGL+IW+AIK+WV DYCS YY +DE I    
Sbjct: 606 DLVKRGVAVEDSSSPHGVRLLIEDYPYAVDGLEIWSAIKSWVTDYCSFYYGSDEEILKDN 665

Query: 96  QLQSWWKEVRERGDEDKKDEPWWPRMESVEELINSCTIIIWISSALHAAVNFGQYPYGGF 155
           +LQ+WWKE+RE G  DKK+EPWWP ME+ +ELI+SCT IIWI+SALHAAVNFGQYPY G+
Sbjct: 666 ELQAWWKELREVGHGDKKNEPWWPEMETPQELIDSCTTIIWIASALHAAVNFGQYPYAGY 725

Query: 156 LPNRPSLSKRFLPEEGTSEYLELQSNPEK------------------------------- 215
           LPNRP++S+RF+PE GT EY EL+ NP+K                               
Sbjct: 726 LPNRPTVSRRFMPEPGTPEYEELKKNPDKAFLKTITAQLQTLLGVSLIEILSRHTTDEIY 785

Query: 216 -----------------AFERFNKQLVEIETMIAERNQNFTLKNHVGRPMSMAYTLLLPT 240
                            AF++F K+L +IE  I +RN +  L N  G P++  YTLL PT
Sbjct: 786 LGQRESPEWTKDKEPLAAFDKFGKKLTDIEKQIIQRNGDNILINRSG-PVNAPYTLLFPT 845

[Close]

BLAST of CmaCh05G011320 vs. ExPASy Swiss-Prot
Match: O22508 (Probable linoleate 9S-lipoxygenase 8 OS=Solanum tuberosum OX=4113 GN=LOX1.8 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.2e-69
Identity = 132/256 (51.56%), Postives = 167/256 (65.23%), Query Frame = 0


Query: 36  DLIHRGVAIEDPGAPHGLRLLTADYPYAVDGLDIWAAIKTWVLDYCSLYYENDEMI---- 95
           DL+ RGVA+ED  +PHG+RLL  DYPYAVDGL+IW+AIK+WV DYCS YY +DE I    
Sbjct: 607 DLVKRGVAVEDSSSPHGVRLLIEDYPYAVDGLEIWSAIKSWVTDYCSFYYGSDEEILKDN 666

Query: 96  QLQSWWKEVRERGDEDKKDEPWWPRMESVEELINSCTIIIWISSALHAAVNFGQYPYGGF 155
           +LQ+WWKE+RE G  DKK+EPWWP M++ +ELI+SCT IIWI+SALHAAVNFGQYPY G+
Sbjct: 667 ELQAWWKELREVGHGDKKNEPWWPEMKTPQELIDSCTTIIWIASALHAAVNFGQYPYAGY 726

Query: 156 LPNRPSLSKRFLPEEGTSEYLELQSNPEK------------------------------- 215
           LPNRP++S+RF+PE GT EY EL+ NP+K                               
Sbjct: 727 LPNRPTVSRRFMPEPGTPEYEELKRNPDKAFLKTITAQLQTLLGVSLVEILSRHTTDEIY 786

Query: 216 -----------------AFERFNKQLVEIETMIAERNQNFTLKNHVGRPMSMAYTLLLPT 240
                            AF+RF K+L +IE  I +RN +  L N  G P++  YTLL PT
Sbjct: 787 LGQRESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSG-PVNAPYTLLFPT 846

[Close]

BLAST of CmaCh05G011320 vs. TAIR 10
Match: AT1G55020.1 (lipoxygenase 1 )

HSP 1 Score: 247.7 bits (631), Expect = 1.1e-65
Identity = 126/256 (49.22%), Postives = 164/256 (64.06%), Query Frame = 0


Query: 36  DLIHRGVAIEDPGAPHGLRLLTADYPYAVDGLDIWAAIKTWVLDYCSLYYENDEMIQ--- 95
           +L  RG+A+EDP APHGLRL   DYPYAVDGL++W AI++WV DY  L+Y+ +E IQ   
Sbjct: 605 ELKKRGMAVEDPEAPHGLRLRIKDYPYAVDGLEVWYAIESWVRDYIFLFYKIEEDIQTDT 664

Query: 96  -LQSWWKEVRERGDEDKKDEPWWPRMESVEELINSCTIIIWISSALHAAVNFGQYPYGGF 155
            LQ+WWKEVRE G  DKK EPWWP+M++ EEL+ SCTIIIW++SALHAAVNFGQYP  G+
Sbjct: 665 ELQAWWKEVREEGHGDKKSEPWWPKMQTREELVESCTIIIWVASALHAAVNFGQYPVAGY 724

Query: 156 LPNRPSLSKRFLPEEGTSEYLELQSNPEK------------------------------- 215
           LPNRP++S++++P+E T E+ EL+ NP+K                               
Sbjct: 725 LPNRPTISRQYMPKENTPEFEELEKNPDKVFLKTITAQLQTLLGISLIEILSTHSSDEVY 784

Query: 216 -----------------AFERFNKQLVEIETMIAERNQNFTLKNHVGRPMSMAYTLLLPT 240
                            AFE+F +++ EIE  I ERN + TLKN  G  + M YTLL P+
Sbjct: 785 LGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGL-VKMPYTLLFPS 844

[Close]

BLAST of CmaCh05G011320 vs. TAIR 10
Match: AT3G22400.1 (PLAT/LH2 domain-containing lipoxygenase family protein )

HSP 1 Score: 240.4 bits (612), Expect = 1.8e-63
Identity = 127/284 (44.72%), Postives = 170/284 (59.86%), Query Frame = 0


Query: 21  RLLTEVGISLNKHFV--------DLIHRGVAIEDPGAPHGLRLLTADYPYAVDGLDIWAA 80
           R   E+  S+ K++V        DL+ RGVA+EDP + +G++LL  DYP+AVDGL+IW+A
Sbjct: 604 RYAMEMSSSIYKNWVFTEQALPKDLLKRGVAVEDPNSDNGVKLLIEDYPFAVDGLEIWSA 663

Query: 81  IKTWVLDYCSLYYENDEMIQ----LQSWWKEVRERGDEDKKDEPWWPRMESVEELINSCT 140
           IKTWV +YC+ YY ND+ +Q    +QSWW E+R +G  DK+ E WWP M++ ++LI +CT
Sbjct: 664 IKTWVTEYCTFYYNNDKTVQTDTEIQSWWTELRTKGHGDKRHESWWPSMQTRDDLIETCT 723

Query: 141 IIIWISSALHAAVNFGQYPYGGFLPNRPSLSKRFLPEEGTSEYLELQSN----------- 200
           IIIWI+SALHAAVNFGQYPY GFLPNRP++S+RF+PE GT EY EL+ +           
Sbjct: 724 IIIWIASALHAAVNFGQYPYAGFLPNRPTVSRRFMPEPGTDEYAELEEDADVAFLKTITP 783

Query: 201 -------------------------------------PEKAFERFNKQLVEIETMIAERN 240
                                                P +AF+RF K+L  IE  I  RN
Sbjct: 784 QLQTLLGISIIEILSMHSTDEIYLGQRDSPNWTADDEPLEAFKRFGKELELIENNIIRRN 843

[Close]

BLAST of CmaCh05G011320 vs. TAIR 10
Match: AT1G67560.1 (PLAT/LH2 domain-containing lipoxygenase family protein )

HSP 1 Score: 192.6 bits (488), Expect = 4.4e-49
Identity = 104/258 (40.31%), Postives = 142/258 (55.04%), Query Frame = 0


Query: 36  DLIHRGVAIEDPGAPHGLRLLTADYPYAVDGLDIWAAIKTWVLDYCSLYYENDEMI---- 95
           DL+ RG+A ED  A  G+RL+  DYPYA DGL IW AIK  V  Y   +Y + + I    
Sbjct: 661 DLVRRGMAEEDSSAECGVRLVIDDYPYAADGLLIWKAIKDLVESYVKHFYSDSKSITSDL 720

Query: 96  QLQSWWKEVRERGDEDKKDEPWWPRMESVEELINSCTIIIWISSALHAAVNFGQYPYGGF 155
           +LQ+WW E++ +G  DKKDEPWWP++ + ++L    T +IWI+S  HAA+NFGQYP+GG+
Sbjct: 721 ELQAWWDEIKNKGHYDKKDEPWWPKLNTTQDLSQILTNMIWIASGQHAAINFGQYPFGGY 780

Query: 156 LPNRPSLSKRFLPEEGTSEYLELQSNPE-------------------------------- 215
           +PNRP+L ++ +P+E   +Y     NP+                                
Sbjct: 781 VPNRPTLLRKLIPQETDPDYEMFMRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEY 840

Query: 216 ------------------KAFERFNKQLVEIETMIAERNQNFTLKNHVGRPMSMAYTLLL 240
                             K F +F+++LV+IE  I ERN++  LKN  G  M   Y LLL
Sbjct: 841 LIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMP-PYELLL 900

[Close]

BLAST of CmaCh05G011320 vs. TAIR 10
Match: AT1G72520.1 (PLAT/LH2 domain-containing lipoxygenase family protein )

HSP 1 Score: 190.3 bits (482), Expect = 2.2e-48
Identity = 99/257 (38.52%), Postives = 142/257 (55.25%), Query Frame = 0


Query: 36  DLIHRGVAIEDPGAPHGLRLLTADYPYAVDGLDIWAAIKTWVLDYCSLYYENDEMIQ--- 95
           DLI RG+A+ DP  PHGL+LL  DYPYA DGL +W+AI+TWV  Y   YY N  +IQ   
Sbjct: 671 DLIRRGMAVPDPTQPHGLKLLVEDYPYANDGLLLWSAIQTWVRTYVERYYANSNLIQTDT 730

Query: 96  -LQSWWKEVRERGDEDKKDEPWWPRMESVEELINSCTIIIWISSALHAAVNFGQYPYGGF 155
            LQ+W+ E    G  D +D  WWP++ +VE+L++  T IIW++SA HAA+NFGQYPYGG+
Sbjct: 731 ELQAWYSESINVGHADHRDAEWWPKLSTVEDLVSVITTIIWLASAQHAALNFGQYPYGGY 790

Query: 156 LPNRPSLSKRFLPEEGTSEYLELQSNPEK------------------------------- 215
           +PNRP L +R +P+E   E+     +P+K                               
Sbjct: 791 VPNRPPLMRRLIPDESDPEFTSFIEDPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEY 850

Query: 216 ------------------AFERFNKQLVEIETMIAERNQNFTLKNHVGRPMSMAYTLLLP 240
                             AF  F+ ++  IE  I +RN++ + +N  G  + + Y L+ P
Sbjct: 851 IGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGV-LPYELMAP 910

[Close]

BLAST of CmaCh05G011320 vs. TAIR 10
Match: AT3G45140.1 (lipoxygenase 2 )

HSP 1 Score: 190.3 bits (482), Expect = 2.2e-48
Identity = 111/258 (43.02%), Postives = 141/258 (54.65%), Query Frame = 0


Query: 36  DLIHRGVAIEDPGAPHGLRLLTADYPYAVDGLDIWAAIKTWVLDYCSLYYENDEMI---- 95
           DLI RG+A ED  A HG+RL   DYP+A DGL +W AIK WV DY   YY ++E+I    
Sbjct: 640 DLIKRGLAEEDKTAEHGVRLTIPDYPFANDGLILWDAIKEWVTDYVKHYYPDEELITSDE 699

Query: 96  QLQSWWKEVRERGDEDKKDEPWWPRMESVEELINSCTIIIWISSALHAAVNFGQYPYGGF 155
           +LQ WW EVR  G  DKKDEPWWP +++ ++LI   T I W++S  HAAVNFGQY YGG+
Sbjct: 700 ELQGWWSEVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYGGY 759

Query: 156 LPNRPSLSKRFLP-EEGTSEYL-ELQSNPEK----------------------------- 215
            PNRP+ ++  +P E+ T E L E   +PEK                             
Sbjct: 760 FPNRPTTTRIRMPTEDPTDEALKEFYESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDE 819

Query: 216 -------------------AFERFNKQLVEIETMIAERNQNFTLKNHVGRPMSMAYTLLL 240
                              AFERF  +L  +E +I ERN N TLKN  G  + + Y LL 
Sbjct: 820 EYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGV-VKYELLK 879

The following BLAST results are available for this feature:

BLAST of CmaCh05G011320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43191	2.0e-70	51.95	Probable linoleate 9S-lipoxygenase 5 OS=Solanum tuberosum OX=4113 GN=LOX1.5 PE=2...	[more]
P37831	2.8e-69	51.95	Linoleate 9S-lipoxygenase 1 OS=Solanum tuberosum OX=4113 GN=LOX1.1 PE=2 SV=1	[more]
Q41238	4.8e-69	51.56	Linoleate 9S-lipoxygenase 6 (Fragment) OS=Solanum tuberosum OX=4113 GN=LOX1.6 PE...	[more]
Q43190	8.2e-69	51.56	Probable linoleate 9S-lipoxygenase 4 OS=Solanum tuberosum OX=4113 GN=LOX1.4 PE=2...	[more]
O22508	8.2e-69	51.56	Probable linoleate 9S-lipoxygenase 8 OS=Solanum tuberosum OX=4113 GN=LOX1.8 PE=2...	[more]

BLAST of CmaCh05G011320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55020.1	1.1e-65	49.22	lipoxygenase 1	[more]
AT3G22400.1	1.8e-63	44.72	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT1G67560.1	4.4e-49	40.31	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT1G72520.1	2.2e-48	38.52	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT3G45140.1	2.2e-48	43.02	lipoxygenase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013819	Lipoxygenase, C-terminal	PFAM	PF00305	Lipoxygenase	coord: 36..182 e-value: 3.7E-68 score: 230.6 coord: 180..222 e-value: 7.3E-6 score: 24.7
IPR013819	Lipoxygenase, C-terminal	PROSITE	PS51393	LIPOXYGENASE_3	coord: 183..239 score: 14.820924
IPR013819	Lipoxygenase, C-terminal	PROSITE	PS51393	LIPOXYGENASE_3	coord: 36..182 score: 59.459976
None	No IPR available	GENE3D	1.20.245.10		coord: 180..238 e-value: 1.8E-13 score: 52.3 coord: 21..179 e-value: 1.1E-57 score: 197.8
None	No IPR available	PANTHER	PTHR11771:SF126	LINOLEATE 9S-LIPOXYGENASE 1	coord: 180..239
None	No IPR available	PANTHER	PTHR11771:SF126	LINOLEATE 9S-LIPOXYGENASE 1	coord: 35..182
IPR000907	Lipoxygenase	PANTHER	PTHR11771	LIPOXYGENASE	coord: 35..182
IPR000907	Lipoxygenase	PANTHER	PTHR11771	LIPOXYGENASE	coord: 180..239
IPR036226	Lipoxigenase, C-terminal domain superfamily	SUPERFAMILY	48484	Lipoxigenase	coord: 36..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G011320.1	CmaCh05G011320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046394	carboxylic acid biosynthetic process
biological_process	GO:0006631	fatty acid metabolic process
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen