CmaCh05G007750 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G007750
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	GPN-loop GTPase 1-like
Location	Cma_Chr05: 4602525 .. 4607218 (-)
RNA-Seq Expression	CmaCh05G007750
Synteny	CmaCh05G007750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCCTCCTCCTCTCCGGCTTCTTCTCGCTTTAAGCAGCACAGTGTGGCCGCCATCGTCGCCGCCGTCTTTCTTCCGCTCGTGTGGCCTTAGCCTCCCTCCTAACGGTTTGCACTGATTTTCTACTCTCTTGTTGTACTGATATTCTCATATGCATTACGTCATTTTTCTCACTTGAAAAACTCAAATTAAGACTTGTCTAATGAAGGAAAGGATGAGTGGTTTTTTTTTTAATTTTTTTTTTTTTGTAATAGCAACGAAAGAGAAATCAGCCGCGCGGCAAACTGGGATATGTTTGTACTTGAGGAAAGTTTTTTGATCGATAAACGAACGTCCTCGGCCATATTTATTGTTGTAGATTGTAGTTTGTTTTGATGAGTTTTAAATTAAAATTATGGTGGGCGAGCGCGAGACCGACCGTGAGTCTTCTTTGTTTACATTTATGCTAGGCTTTTAGGGGCTGTTCTCTCTCAGAGGCCAGGCGGGAGAAAAAAGAGTCTAAGAAAAAGTCTGAACTTCATGTCCCTTATTTATCATCGTTTGTTTGTTGTTGTTTCAGCCAGCAATGGATGTCGATTCTGATAACGTTCATAAACCATCGGAAGATGCCGAGTGCAAGCCAATGTTGTCTGAAGATTCAAATGTATATTAAGTAACTTTAATTTCCTTAATTATATGTATTTTTCATTGTTTTTCTTTTAGATACATGGAAATTTTAGCTGTTTGGTGCATAAGAAAGTGATGAAATTATTCCAAGTTTCTTGTCTCGTCCGTTTGGGATTTTATTCCGTTAGTTATGAGATTTTAAATAAACGTTGGTGTTTATTTTCTTTGTTTTATGTGTATGTTTGGATCCCATTTTGACCATGTTCCAATCGTATGTTGAAAGCTTGTCTTGATTCGTAGTCTTTTTTTTACATTAAGAAGAAGGGTAAAGCAAAAGAGGAAATTGCTGATTCAATTAAGAACTTAAATATTGAGGAGTTATAATCTTCTTTTGTCATGTTTATTCAAGAAACATGCATATCAGTTCTGTTTCGTGTATTAAAAGGTCGGATGCAATTATTTTCTAACTTTCTCATTTGGTTCATATTTCAACTGCCTTGTTCTGTAAGTCGGAGGAAACTGTTTTCTAAATTTATTGTTTGGTGGGCTAATCACTTAGTTATGAGATTTTATGTGGGTTTTACTTTATGTGTATGGAAGTGTATGGGCCACATTTCAACTGTCTTGGTCAATAAGTTATTAAGAATTTAAGAGCTAGTCTTGATTTTTATTTTTTTTCGTATGTTGATATTAAGGATAATGGTAAAGCACAAGAAGAGCTTGCTGATTCTATTAAGAACTTAAATATCGAAGAATCATCTAGACATGCTGGGTCTTCAGCCACAAACTTCAGGCGCAAACCAGTTATTATCATTGTCATAGGAATGGCAGGTAATTTTCAATGGAAGTTCTTGTTGCTGTTGAAGTTCAGACGCATGATAAATCTTTTAACTTATAATTATGGTGTTTAAGACCTATGGTTTCTATATTGATGTTTGTCACTTTCAAAAAGTAAAATAAAAAATTCCCCCTATTTCAAAAGGGATTGACTTGCACTTCTGCAATATATTTTTCAAGTGTGCCTACCACGTACTGATGTTTCTTTTGTTTCCAGAAGCCCATACAGTGTGCCTGACCATTTAGAGACTGTTCTAGAATTTTTTCTAGGTTCTACCAGGTGAGGTGGGGTTTTGTCACCCTGCCCTAGGAGCTCAGAAGATCGAGCATAGGAAATTTGAGGGAGGAAATATTTCCTCCTATCTGAATGGATATGGAGGTTCCATCAGGAATAGGAGGCTCTTTAGTATAAGATCATGTTAAATAAATACGGTCAATCGCTGGGAAACTTCTTAGTCTATGGAAGTCCCTGGTGTTGGATATTATATTTAGTTTTGTATCTTGGTTTCCATGTTCCTAAGTTTTTCATTATCATCAGTACTGTTTTGAGACTGGAAAGAAAGTTGAAAAGAATAGAAGAAAGATAAGAGAGTTTTAGTCAGTTAAGAAGCAGAGATTTTAGAAAAGAAATTATAGAGAGTTGAAAGAGAAAATAAGGTGGTTTAAATTCAGATATACAAGTTTGTTTAGAAAAGAATTTATAGTGAGTTGAAAGAGAAAATAAGAGGGAAAAGATCTAGCATGTTTGTTTATATTCAGATATACAAGTTTTTCTTTGAGGTGGATTGTCTTTGATTCTTTAAAGTTTTGTTTGTTTCTTTTTGTTCTTGTATCATTTTTAATTGTAAAGAGATTGAGTGGGGTGCTTGTTAGATAAGTTTTGTGCAACTGCAGCGGATGGATGGATTTTGGGGTTAAATTTGGGTTTATGTTTCTTATGTCTCAAATCAAGTTCATTTGGTTTTCTTGAATGAAACACTGTCAGTTTTGAGTTATATTACATAGCCGTAATGAAGTGGCTTTTTTCAGGGAGTGGGAAGACAACTTTTCTTCATCGTCTGGTTTGCCACACACATGCATCAAATATCAGGGGTTATGTAATGAATCTTGATCCTGCTGTAATGACACTGCCTTTTGGTGCAAATATTGATATAAGAGATACCGTGCGGTACAAGGAAGTGATGAAACAATTTAATCTCGGGCCTAATGGAGGAATTCTGACGTCACTTAACTTGTTTGCCACCAAATTTGATGAGGTGAAATTTCGCATGTATCTCTTTCTTAAATTATGTTTCTCTTTCTTAAATGGTTATAGTGAGTTTGGAATGAATTTTTTTCATCATTTGTTTTTTGATCTGTAAAAGAAGATTTTATGTTTTGCTAAGTTCATGAACTGTTCTTACAAGAAACAAGCAAGTTCAGGACTAATGCTTGTGTACCTTTAATAGCCAATCTTTCTCATATCATGTGCGTCGAGTTCATATTAATGGCATAATTCCAATGTTATTTTATTATTTAGTATTTCTTCTATATTTATACTATACATCACACACCCTACTGTATTAACATATTAAAAGTTTCTTGTTGAACTACGTGATCTCAGGTAATTTCAGTGATCGAAAAGCGAGCAGATCAGCTTGATTATGTCCTTGTTGATACTCCTGGTCAGATTGAGATATTCACGTGGTCTGCGTCTGGGGCCATCATTACTGAGGCTTTTGCTTCAACCTTTCCCACTGTAATTGCTTATGTTGTCGATACACCTCGTTCGTCTAATCCAGTCACATTCATGAGCAACATGCTTTATGCCTGTTCCATCCTCTACAAGACGAGGCTACCAGTTGTGCTGGTTTTCAATAAAACCGACGTGTCAAAACACGAATTTGCTTTGGAGGTATTTATCATAGTAACTTTGGCCTTTCTTCAGTGTTTTTTATAGAGTAGAGCTGTACCCAAGTGTTGACCCTTATTGGTATAAACATACCCTTCAAGGTCTGAGTTTTAGCCATGGAAAACATAGTAATTTAAAACTCTTAATTGTCTATTAGGCCGTTTTAGAGTGGTGGTTTAAGTCTCCCAATGCTTACTAGTGGTGTGGGTGAGTCATTTATAATCCTAATATCAATTGAAAATTTAGACCTTTGCCACCCGAGGAACGCTTCATTTTCGATAAAGATCTTCTCTCGAACCTTTGTGTATACTTATACATCAATGTTATTGTGCTGTACATTTCCCTTTTTAGATTATCAATATACTACAAAGCTCTTGAAATTTAAAAATGTTAAATAAGGAATTGTGCATGCAGTGGATGGAAGATTTTGAAGCGTTTCAAGCTGCAGTCAGTTCCGATAGTTCATACACCTCCACATTAAGTCAGAGTCTTTCACTTGTGCTGGATGAGTTCTATAAGAACTTGAAATCTGTTGGAGTGTCTGCAGTTTCTGGCTCCGGAATGGATTCTTTCTTTAAAGCAATTGAATCCAGTGCTGAGGAGTACATGGAAAACTATAAGTATGAATCTTTTCATCTGTAAATCTATTAGTTAGAGATGACGATTATGCAGGTTGGAACATTGCAACGATTTTGACACTTCTGCTACTTTTGGCTTTTTTTCTCAGGGCAGAGCTCGACAAGAGAATCGCCGAGAAGCAGCGATTGGAGGAAGAGCGCAGACGGGAAAACATGGAGAAGTTGAGGAGGGATATGGAGAGCTCGAAGGGACAAACTGTGGTTTTGAGCACTGGTTTGAAGGACGATGAAAGTAAAACTAAGATGGTTGATGATGAAGACGAAGAGATTGACGAAGAAAATGAAGACGATTATGATTACAATAGATCTACCGAAGAGGACGATCCTATTGATGAGGATGAAGATGAAGAGGTTGCTAGATTCTCCTTTTAGTAGTGAAACAGACATGATTGGACAGAGGAGAAGTTGAAATGAAACTGTATACATTTTACGAAGAAACCGAGTCACCCCACTCCGAACGCGAGGATTGCCATTGTTTTTCTGCTTGGGGGCTCTCGTGATATTCCATTTTGATGTTGCAACTAGAGGAGCTCTGGTTTGAAAGCTGGGTAGCCCATGTGTGTAATGTTGTTTGTACATTTTGACGATTTATGACTCCCTATTTGTGATGTGCTCCCTCTGGTTGAACCTAGGTGACCTCTTGTCAATTGAAGCTAGTTTTAGTTTTAAGTTTCAAATTCTATTTTAAATATTTGTTTGGCCTACAACTGGCAATAGTATG

mRNA sequence

TTCTTCCTCCTCCTCTCCGGCTTCTTCTCGCTTTAAGCAGCACAGTGTGGCCGCCATCGTCGCCGCCGTCTTTCTTCCGCTCGTGTGGCCTTAGCCTCCCTCCTAACGCCAGCAATGGATGTCGATTCTGATAACGTTCATAAACCATCGGAAGATGCCGAGTGCAAGCCAATGTTGTCTGAAGATTCAAATGATAATGGTAAAGCACAAGAAGAGCTTGCTGATTCTATTAAGAACTTAAATATCGAAGAATCATCTAGACATGCTGGGTCTTCAGCCACAAACTTCAGGCGCAAACCAGTTATTATCATTGTCATAGGAATGGCAGGGAGTGGGAAGACAACTTTTCTTCATCGTCTGGTTTGCCACACACATGCATCAAATATCAGGGGTTATGTAATGAATCTTGATCCTGCTGTAATGACACTGCCTTTTGGTGCAAATATTGATATAAGAGATACCGTGCGGTACAAGGAAGTGATGAAACAATTTAATCTCGGGCCTAATGGAGGAATTCTGACGTCACTTAACTTGTTTGCCACCAAATTTGATGAGGTAATTTCAGTGATCGAAAAGCGAGCAGATCAGCTTGATTATGTCCTTGTTGATACTCCTGGTCAGATTGAGATATTCACGTGGTCTGCGTCTGGGGCCATCATTACTGAGGCTTTTGCTTCAACCTTTCCCACTGTAATTGCTTATGTTGTCGATACACCTCGTTCGTCTAATCCAGTCACATTCATGAGCAACATGCTTTATGCCTGTTCCATCCTCTACAAGACGAGGCTACCAGTTGTGCTGGTTTTCAATAAAACCGACGTGTCAAAACACGAATTTGCTTTGGAGTGGATGGAAGATTTTGAAGCGTTTCAAGCTGCAGTCAGTTCCGATAGTTCATACACCTCCACATTAAGTCAGAGTCTTTCACTTGTGCTGGATGAGTTCTATAAGAACTTGAAATCTGTTGGAGTGTCTGCAGTTTCTGGCTCCGGAATGGATTCTTTCTTTAAAGCAATTGAATCCAGTGCTGAGGAGTACATGGAAAACTATAAGGCAGAGCTCGACAAGAGAATCGCCGAGAAGCAGCGATTGGAGGAAGAGCGCAGACGGGAAAACATGGAGAAGTTGAGGAGGGATATGGAGAGCTCGAAGGGACAAACTGTGGTTTTGAGCACTGGTTTGAAGGACGATGAAAGTAAAACTAAGATGGTTGATGATGAAGACGAAGAGATTGACGAAGAAAATGAAGACGATTATGATTACAATAGATCTACCGAAGAGGACGATCCTATTGATGAGGATGAAGATGAAGAGGTTGCTAGATTCTCCTTTTAGTAGTGAAACAGACATGATTGGACAGAGGAGAAGTTGAAATGAAACTGTATACATTTTACGAAGAAACCGAGTCACCCCACTCCGAACGCGAGGATTGCCATTGTTTTTCTGCTTGGGGGCTCTCGTGATATTCCATTTTGATGTTGCAACTAGAGGAGCTCTGGTTTGAAAGCTGGGTAGCCCATGTGTGTAATGTTGTTTGTACATTTTGACGATTTATGACTCCCTATTTGTGATGTGCTCCCTCTGGTTGAACCTAGGTGACCTCTTGTCAATTGAAGCTAGTTTTAGTTTTAAGTTTCAAATTCTATTTTAAATATTTGTTTGGCCTACAACTGGCAATAGTATG

Coding sequence (CDS)

ATGGATGTCGATTCTGATAACGTTCATAAACCATCGGAAGATGCCGAGTGCAAGCCAATGTTGTCTGAAGATTCAAATGATAATGGTAAAGCACAAGAAGAGCTTGCTGATTCTATTAAGAACTTAAATATCGAAGAATCATCTAGACATGCTGGGTCTTCAGCCACAAACTTCAGGCGCAAACCAGTTATTATCATTGTCATAGGAATGGCAGGGAGTGGGAAGACAACTTTTCTTCATCGTCTGGTTTGCCACACACATGCATCAAATATCAGGGGTTATGTAATGAATCTTGATCCTGCTGTAATGACACTGCCTTTTGGTGCAAATATTGATATAAGAGATACCGTGCGGTACAAGGAAGTGATGAAACAATTTAATCTCGGGCCTAATGGAGGAATTCTGACGTCACTTAACTTGTTTGCCACCAAATTTGATGAGGTAATTTCAGTGATCGAAAAGCGAGCAGATCAGCTTGATTATGTCCTTGTTGATACTCCTGGTCAGATTGAGATATTCACGTGGTCTGCGTCTGGGGCCATCATTACTGAGGCTTTTGCTTCAACCTTTCCCACTGTAATTGCTTATGTTGTCGATACACCTCGTTCGTCTAATCCAGTCACATTCATGAGCAACATGCTTTATGCCTGTTCCATCCTCTACAAGACGAGGCTACCAGTTGTGCTGGTTTTCAATAAAACCGACGTGTCAAAACACGAATTTGCTTTGGAGTGGATGGAAGATTTTGAAGCGTTTCAAGCTGCAGTCAGTTCCGATAGTTCATACACCTCCACATTAAGTCAGAGTCTTTCACTTGTGCTGGATGAGTTCTATAAGAACTTGAAATCTGTTGGAGTGTCTGCAGTTTCTGGCTCCGGAATGGATTCTTTCTTTAAAGCAATTGAATCCAGTGCTGAGGAGTACATGGAAAACTATAAGGCAGAGCTCGACAAGAGAATCGCCGAGAAGCAGCGATTGGAGGAAGAGCGCAGACGGGAAAACATGGAGAAGTTGAGGAGGGATATGGAGAGCTCGAAGGGACAAACTGTGGTTTTGAGCACTGGTTTGAAGGACGATGAAAGTAAAACTAAGATGGTTGATGATGAAGACGAAGAGATTGACGAAGAAAATGAAGACGATTATGATTACAATAGATCTACCGAAGAGGACGATCCTATTGATGAGGATGAAGATGAAGAGGTTGCTAGATTCTCCTTTTAG

Protein sequence

MDVDSDNVHKPSEDAECKPMLSEDSNDNGKAQEELADSIKNLNIEESSRHAGSSATNFRRKPVIIIVIGMAGSGKTTFLHRLVCHTHASNIRGYVMNLDPAVMTLPFGANIDIRDTVRYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVIAYVVDTPRSSNPVTFMSNMLYACSILYKTRLPVVLVFNKTDVSKHEFALEWMEDFEAFQAAVSSDSSYTSTLSQSLSLVLDEFYKNLKSVGVSAVSGSGMDSFFKAIESSAEEYMENYKAELDKRIAEKQRLEEERRRENMEKLRRDMESSKGQTVVLSTGLKDDESKTKMVDDEDEEIDEENEDDYDYNRSTEEDDPIDEDEDEEVARFSF

Homology

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BLAST of CmaCh05G007750 vs. ExPASy Swiss-Prot
Match: Q8W586 (GPN-loop GTPase QQT2 OS=Arabidopsis thaliana OX=3702 GN=QQT2 PE=1 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 4.2e-143
Identity = 274/382 (71.73%), Postives = 326/382 (85.34%), Query Frame = 0


Query: 19  PMLSEDSNDNGKAQEELADSIKNLNIEESSRHAGSSATNFRRKPVIIIVIGMAGSGKTTF 78
           PM S    D  +  ++L DS+  L +      A SS++NF++KP+IIIV+GMAGSGKT+F
Sbjct: 3   PMESSSEQDIVEESQKLVDSLDKLRVS-----AASSSSNFKKKPIIIIVVGMAGSGKTSF 62

Query: 79  LHRLVCHTHASNIRGYVMNLDPAVMTLPFGANIDIRDTVRYKEVMKQFNLGPNGGILTSL 138
           LHRLVCHT  S   GYV+NLDPAVM+LPFGANIDIRDTV+YKEVMKQ+NLGPNGGILTSL
Sbjct: 63  LHRLVCHTFDSKSHGYVVNLDPAVMSLPFGANIDIRDTVKYKEVMKQYNLGPNGGILTSL 122

Query: 139 NLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVIAYVV 198
           NLFATKFDEV+SVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTV+ YVV
Sbjct: 123 NLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVV 182

Query: 199 DTPRSSNPVTFMSNMLYACSILYKTRLPVVLVFNKTDVSKHEFALEWMEDFEAFQAAVSS 258
           DTPRSS+P+TFMSNMLYACSILYKTRLP+VL FNKTDV+ H+FALEWMEDFE FQAA+ S
Sbjct: 183 DTPRSSSPITFMSNMLYACSILYKTRLPLVLAFNKTDVADHKFALEWMEDFEVFQAAIQS 242

Query: 259 DSSYTSTLSQSLSLVLDEFYKNLKSVGVSAVSGSGMDSFFKAIESSAEEYMENYKAELDK 318
           D+SYT+TL+ SLSL L EFY+N++SVGVSA+SG+GMD FFKAIE+SAEEYME YKA+LD 
Sbjct: 243 DNSYTATLANSLSLSLYEFYRNIRSVGVSAISGAGMDGFFKAIEASAEEYMETYKADLDM 302

Query: 319 RIAEKQRLEEERRRENMEKLRRDMESSKGQTVVLSTGLKDDESKTKMVDDEDEEIDEENE 378
           R A+K+RLEEER++  MEKLR+DMESS+G TVVL+TGLKD ++  KM+ +ED+E D + E
Sbjct: 303 RKADKERLEEERKKHEMEKLRKDMESSQGGTVVLNTGLKDRDATEKMMLEEDDE-DFQVE 362

Query: 379 DDYDYNRSTEEDDPIDEDEDEE 401
           D+ D       DD IDED++++
Sbjct: 363 DEED------SDDAIDEDDEDD 372

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BLAST of CmaCh05G007750 vs. ExPASy Swiss-Prot
Match: Q54C25 (GPN-loop GTPase 1 OS=Dictyostelium discoideum OX=44689 GN=gpn1 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 6.4e-99
Identity = 196/370 (52.97%), Postives = 268/370 (72.43%), Query Frame = 0


Query: 37  DSIKNLNIEESSRHAGSSATNFRRKPVIIIVIGMAGSGKTTFLHRLVCHTHASNIRGYVM 96
           D++ N N  E+            ++P+ IIV+GMAGSGKTT L R+  H + + I GY++
Sbjct: 18  DNVNNNNNNENKE---------EKQPINIIVLGMAGSGKTTLLQRIRAHLYENKIPGYII 77

Query: 97  NLDPAVMTLPFGANIDIRDTVRYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIEKRA 156
           NLDPAV  LP+  NIDIRDTV YKEVMKQFNLGPNGGI+TSLNLF+TKFD+V+ ++EKR+
Sbjct: 78  NLDPAVSKLPYTPNIDIRDTVNYKEVMKQFNLGPNGGIVTSLNLFSTKFDKVLEIVEKRS 137

Query: 157 DQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVIAYVVDTPRSSNPVTFMSNMLYA 216
             LDY+++DTPGQIE+FTWSASG IITE  AS+FPTV+ YVVDTPR+ +P TFMSNMLYA
Sbjct: 138 SSLDYIILDTPGQIEVFTWSASGTIITELMASSFPTVLVYVVDTPRTVDPTTFMSNMLYA 197

Query: 217 CSILYKTRLPVVLVFNKTDVSKHEFALEWMEDFEAFQAAVSSDSSYTSTLSQSLSLVLDE 276
           CSI+YK++LP+V+ FNK D++ H FA EWM DF++FQ A+++D +Y   L++SLSLVL+E
Sbjct: 198 CSIMYKSKLPMVVAFNKIDITNHRFAEEWMSDFDSFQDALTNDPTYMGNLTRSLSLVLEE 257

Query: 277 FYKNLKSVGVSAVSGSGMDSFFKAIESSAEEYMENYKAELDKRIAEKQRLEEERRRENME 336
           FY  L+SVGVSAV GSG+D FF+ I  +A++Y + YKA+L+K   +K   E+    +N E
Sbjct: 258 FYSTLQSVGVSAVDGSGIDEFFEKIGLAAQDYHKYYKADLEKIKKQKSDKEQAEANKNWE 317

Query: 337 KLRRDMESSKGQTV---VLSTGLKDDESKTKMVDDEDEE---IDEENEDDYDYNRSTEED 396
           KL+RD+E SKG  V         ++++ KTK + D++E+    D + ED  +Y    +E 
Sbjct: 318 KLKRDLEESKGAKVEYDFKKEKKRENQEKTKNIYDDEEDDYRDDRDMEDSGEYESYEDEQ 377

Query: 397 DPIDEDEDEE 401
           +  D + +EE
Sbjct: 378 EEGDYENEEE 378

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BLAST of CmaCh05G007750 vs. ExPASy Swiss-Prot
Match: Q9HCN4 (GPN-loop GTPase 1 OS=Homo sapiens OX=9606 GN=GPN1 PE=1 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 8.7e-96
Identity = 196/370 (52.97%), Postives = 257/370 (69.46%), Query Frame = 0


Query: 47  SSRHAGSSATNFRRKPVIIIVIGMAGSGKTTFLHRLVCHTHASNIRGYVMNLDPAVMTLP 106
           S+  A   A+   R PV ++V+GMAGSGKTTF+ RL  H HA     YV+NLDPAV  +P
Sbjct: 4   SAAAAELQASGGPRHPVCLLVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVP 63

Query: 107 FGANIDIRDTVRYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDT 166
           F ANIDIRDTV+YKEVMKQ+ LGPNGGI+TSLNLFAT+FD+V+  IEK  +   YVL+DT
Sbjct: 64  FPANIDIRDTVKYKEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDT 123

Query: 167 PGQIEIFTWSASGAIITEAFASTFPTVIAYVVDTPRSSNPVTFMSNMLYACSILYKTRLP 226
           PGQIE+FTWSASG IITEA AS+FPTV+ YV+DT RS+NPVTFMSNMLYACSILYKT+LP
Sbjct: 124 PGQIEVFTWSASGTIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLP 183

Query: 227 VVLVFNKTDVSKHEFALEWMEDFEAFQAAVSSDSSYTSTLSQSLSLVLDEFYKNLKSVGV 286
            ++V NKTD+  H FA+EWM+DFEAFQ A++ +++Y S L++S+SLVLDEFY +L+ VGV
Sbjct: 184 FIVVMNKTDIIDHSFAVEWMQDFEAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVGV 243

Query: 287 SAVSGSGMDSFFKAIESSAEEYMENYKAELDKRIAEKQRLEEERRRENMEKLRRDMESSK 346
           SAV G+G+D  F  + S+AEEY   Y+ E ++        E +++RE +E+LR+DM S  
Sbjct: 244 SAVLGTGLDELFVQVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGS-- 303

Query: 347 GQTVVLSTGLKDDESKTKM-----------VDDEDEEIDEENED-DYDYNRSTEEDDPID 405
              V L  G   D     +           +D+EDEE D + +D D+     + E+    
Sbjct: 304 ---VALDAGTAKDSLSPVLHPSDLILTRGTLDEEDEEADSDTDDIDHRVTEESHEEPAFQ 363

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BLAST of CmaCh05G007750 vs. ExPASy Swiss-Prot
Match: Q8VCE2 (GPN-loop GTPase 1 OS=Mus musculus OX=10090 GN=Gpn1 PE=1 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.1e-93
Identity = 188/352 (53.41%), Postives = 247/352 (70.17%), Query Frame = 0


Query: 55  ATNFRRKPVIIIVIGMAGSGKTTFLHRLVCHTHASNIRGYVMNLDPAVMTLPFGANIDIR 114
           A+   + PV ++V+GMAGSGKTTF+ RL  H H      YV+NLDPAV  +PF ANIDIR
Sbjct: 12  ASRAPQPPVCLLVLGMAGSGKTTFVQRLTGHLHNKGCPPYVINLDPAVHEVPFPANIDIR 71

Query: 115 DTVRYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFT 174
           DTV+YKEVMKQ+ LGPNGGI+TSLNLFAT+FD+V+  IEK  +   YVL+DTPGQIE+FT
Sbjct: 72  DTVKYKEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNTFRYVLIDTPGQIEVFT 131

Query: 175 WSASGAIITEAFASTFPTVIAYVVDTPRSSNPVTFMSNMLYACSILYKTRLPVVLVFNKT 234
           WSASG IITEA AS+FPTV+ YV+DT RS+NPVTFMSNMLYACSILYKT+LP ++V NKT
Sbjct: 132 WSASGTIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKT 191

Query: 235 DVSKHEFALEWMEDFEAFQAAVSSDSSYTSTLSQSLSLVLDEFYKNLKSVGVSAVSGSGM 294
           D+  H FA+EWM+DFEAFQ A++ +++Y S L++S+SLVLDEFY +L+ VGVSAV G+G 
Sbjct: 192 DIIDHSFAVEWMQDFEAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVVGTGF 251

Query: 295 DSFFKAIESSAEEYMENYKAELDKRIAEKQRLEEERRRENMEKLRRDM-------ESSKG 354
           D     + S+AEEY   Y+ E ++        +  +++E +E+LR+DM       E+ KG
Sbjct: 252 DELCTQVTSAAEEYEREYRPEYERLKKSLANAQSNQQKEQLERLRKDMGSVALDPEAGKG 311

Query: 355 QT--------VVLSTGLKD--DESKTKMVDDEDEEIDEENEDDYDYNRSTEE 390
                     ++L+ G  D  DE      DD D  + EE+ ++  +    EE
Sbjct: 312 NASPVLDPSDLILTRGTLDEEDEEADSDTDDIDHRVTEESREEPAFQNFMEE 363

[Close]

BLAST of CmaCh05G007750 vs. ExPASy Swiss-Prot
Match: A4FUD1 (GPN-loop GTPase 1 OS=Bos taurus OX=9913 GN=GPN1 PE=2 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 3.1e-93
Identity = 188/364 (51.65%), Postives = 254/364 (69.78%), Query Frame = 0


Query: 53  SSATNFRRKPVIIIVIGMAGSGKTTFLHRLVCHTHASNIRGYVMNLDPAVMTLPFGANID 112
           S A+   R P  ++V+GMAGSGKTTF+ RL  + H+     YV+NLDPAV  +PF ANID
Sbjct: 10  SQASGGPRPPACLLVLGMAGSGKTTFVQRLTGYLHSQGCPPYVINLDPAVHEVPFPANID 69

Query: 113 IRDTVRYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEI 172
           IRDTV+YKEVMKQ+ LGPNGGI+TSLNLFAT+FD+V+  IEK  +   YVL+DTPGQIE+
Sbjct: 70  IRDTVKYKEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEV 129

Query: 173 FTWSASGAIITEAFASTFPTVIAYVVDTPRSSNPVTFMSNMLYACSILYKTRLPVVLVFN 232
           FTWSASG IITEA AS+FPT++ YV+DT RS+NPVTFMSNMLYACSILYKT+LP ++V N
Sbjct: 130 FTWSASGTIITEALASSFPTIVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMN 189

Query: 233 KTDVSKHEFALEWMEDFEAFQAAVSSDSSYTSTLSQSLSLVLDEFYKNLKSVGVSAVSGS 292
           KTD+  H FA+EWM+DFEAFQ A++ +++Y S L++S+SLVLDEFY +L+ VGVSAV G+
Sbjct: 190 KTDIIDHSFAVEWMQDFEAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVLGT 249

Query: 293 GMDSFFKAIESSAEEYMENYKAELDKRIAEKQRLEEERRRENMEKLRRDMESSKGQTVVL 352
           G+D  F  + S+ EEY   Y+ E ++        + ++++E +E+L++DM S     V L
Sbjct: 250 GLDELFVQVASATEEYEREYRPEYERLKKSLASAQSQQQKEQLERLQKDMGS-----VAL 309

Query: 353 STGLKDDESKTKM-----------VDDEDEEIDEENED-DYDYNRSTEEDDPIDEDEDEE 405
            TG     S   +           +D+EDEE D + +D D+     + E+        E 
Sbjct: 310 DTGTATGSSSPVLDPSDLILTRGTLDEEDEEADSDTDDIDHRVTEESREEPAFQNFMQES 368

[Close]

BLAST of CmaCh05G007750 vs. TAIR 10
Match: AT4G21800.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 509.2 bits (1310), Expect = 3.0e-144
Identity = 274/382 (71.73%), Postives = 326/382 (85.34%), Query Frame = 0


Query: 19  PMLSEDSNDNGKAQEELADSIKNLNIEESSRHAGSSATNFRRKPVIIIVIGMAGSGKTTF 78
           PM S    D  +  ++L DS+  L +      A SS++NF++KP+IIIV+GMAGSGKT+F
Sbjct: 3   PMESSSEQDIVEESQKLVDSLDKLRVS-----AASSSSNFKKKPIIIIVVGMAGSGKTSF 62

Query: 79  LHRLVCHTHASNIRGYVMNLDPAVMTLPFGANIDIRDTVRYKEVMKQFNLGPNGGILTSL 138
           LHRLVCHT  S   GYV+NLDPAVM+LPFGANIDIRDTV+YKEVMKQ+NLGPNGGILTSL
Sbjct: 63  LHRLVCHTFDSKSHGYVVNLDPAVMSLPFGANIDIRDTVKYKEVMKQYNLGPNGGILTSL 122

Query: 139 NLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVIAYVV 198
           NLFATKFDEV+SVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTV+ YVV
Sbjct: 123 NLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVV 182

Query: 199 DTPRSSNPVTFMSNMLYACSILYKTRLPVVLVFNKTDVSKHEFALEWMEDFEAFQAAVSS 258
           DTPRSS+P+TFMSNMLYACSILYKTRLP+VL FNKTDV+ H+FALEWMEDFE FQAA+ S
Sbjct: 183 DTPRSSSPITFMSNMLYACSILYKTRLPLVLAFNKTDVADHKFALEWMEDFEVFQAAIQS 242

Query: 259 DSSYTSTLSQSLSLVLDEFYKNLKSVGVSAVSGSGMDSFFKAIESSAEEYMENYKAELDK 318
           D+SYT+TL+ SLSL L EFY+N++SVGVSA+SG+GMD FFKAIE+SAEEYME YKA+LD 
Sbjct: 243 DNSYTATLANSLSLSLYEFYRNIRSVGVSAISGAGMDGFFKAIEASAEEYMETYKADLDM 302

Query: 319 RIAEKQRLEEERRRENMEKLRRDMESSKGQTVVLSTGLKDDESKTKMVDDEDEEIDEENE 378
           R A+K+RLEEER++  MEKLR+DMESS+G TVVL+TGLKD ++  KM+ +ED+E D + E
Sbjct: 303 RKADKERLEEERKKHEMEKLRKDMESSQGGTVVLNTGLKDRDATEKMMLEEDDE-DFQVE 362

Query: 379 DDYDYNRSTEEDDPIDEDEDEE 401
           D+ D       DD IDED++++
Sbjct: 363 DEED------SDDAIDEDDEDD 372

[Close]

BLAST of CmaCh05G007750 vs. TAIR 10
Match: AT4G21800.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 509.2 bits (1310), Expect = 3.0e-144
Identity = 274/382 (71.73%), Postives = 326/382 (85.34%), Query Frame = 0


Query: 19  PMLSEDSNDNGKAQEELADSIKNLNIEESSRHAGSSATNFRRKPVIIIVIGMAGSGKTTF 78
           PM S    D  +  ++L DS+  L +      A SS++NF++KP+IIIV+GMAGSGKT+F
Sbjct: 3   PMESSSEQDIVEESQKLVDSLDKLRVS-----AASSSSNFKKKPIIIIVVGMAGSGKTSF 62

Query: 79  LHRLVCHTHASNIRGYVMNLDPAVMTLPFGANIDIRDTVRYKEVMKQFNLGPNGGILTSL 138
           LHRLVCHT  S   GYV+NLDPAVM+LPFGANIDIRDTV+YKEVMKQ+NLGPNGGILTSL
Sbjct: 63  LHRLVCHTFDSKSHGYVVNLDPAVMSLPFGANIDIRDTVKYKEVMKQYNLGPNGGILTSL 122

Query: 139 NLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVIAYVV 198
           NLFATKFDEV+SVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTV+ YVV
Sbjct: 123 NLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVV 182

Query: 199 DTPRSSNPVTFMSNMLYACSILYKTRLPVVLVFNKTDVSKHEFALEWMEDFEAFQAAVSS 258
           DTPRSS+P+TFMSNMLYACSILYKTRLP+VL FNKTDV+ H+FALEWMEDFE FQAA+ S
Sbjct: 183 DTPRSSSPITFMSNMLYACSILYKTRLPLVLAFNKTDVADHKFALEWMEDFEVFQAAIQS 242

Query: 259 DSSYTSTLSQSLSLVLDEFYKNLKSVGVSAVSGSGMDSFFKAIESSAEEYMENYKAELDK 318
           D+SYT+TL+ SLSL L EFY+N++SVGVSA+SG+GMD FFKAIE+SAEEYME YKA+LD 
Sbjct: 243 DNSYTATLANSLSLSLYEFYRNIRSVGVSAISGAGMDGFFKAIEASAEEYMETYKADLDM 302

Query: 319 RIAEKQRLEEERRRENMEKLRRDMESSKGQTVVLSTGLKDDESKTKMVDDEDEEIDEENE 378
           R A+K+RLEEER++  MEKLR+DMESS+G TVVL+TGLKD ++  KM+ +ED+E D + E
Sbjct: 303 RKADKERLEEERKKHEMEKLRKDMESSQGGTVVLNTGLKDRDATEKMMLEEDDE-DFQVE 362

Query: 379 DDYDYNRSTEEDDPIDEDEDEE 401
           D+ D       DD IDED++++
Sbjct: 363 DEED------SDDAIDEDDEDD 372

[Close]

BLAST of CmaCh05G007750 vs. TAIR 10
Match: AT4G12790.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 4.1e-16
Identity = 52/173 (30.06%), Postives = 88/173 (50.87%), Query Frame = 0


Query: 66  IVIGMAGSGKTTFLHRLVCHTHASNIRGYVMNLDPAVMTLPFGANIDIRDTVRYKEVMKQ 125
           +VIG AGSGK+T+   L  H        +V+NLDPA     +   +DIR+ +  ++VM+ 
Sbjct: 6   LVIGPAGSGKSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIRELISLEDVMED 65

Query: 126 FNLGPNGGILTSLN-LFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTW-SASGAIIT 185
             LGPNG ++  +  L  +  D V   +E   D  DY++ D PGQIE+FT        + 
Sbjct: 66  LKLGPNGALMYCMEYLEDSLHDWVDEELENYRDD-DYLIFDCPGQIELFTHVPVLKNFVE 125

Query: 186 EAFASTFPTVIAYVVDTPRSSNPVTFMSNMLYACSILYKTRLPVVLVFNKTDV 237
                 F   + Y++D+   ++   F+S  + + + + +  LP V + +K D+
Sbjct: 126 HLKQKNFNVCVVYLLDSQFITDVTKFISGCMSSLAAMIQLELPHVNILSKMDL 177

[Close]

BLAST of CmaCh05G007750 vs. TAIR 10
Match: AT4G12790.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 4.1e-16
Identity = 52/173 (30.06%), Postives = 88/173 (50.87%), Query Frame = 0


Query: 66  IVIGMAGSGKTTFLHRLVCHTHASNIRGYVMNLDPAVMTLPFGANIDIRDTVRYKEVMKQ 125
           +VIG AGSGK+T+   L  H        +V+NLDPA     +   +DIR+ +  ++VM+ 
Sbjct: 6   LVIGPAGSGKSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIRELISLEDVMED 65

Query: 126 FNLGPNGGILTSLN-LFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTW-SASGAIIT 185
             LGPNG ++  +  L  +  D V   +E   D  DY++ D PGQIE+FT        + 
Sbjct: 66  LKLGPNGALMYCMEYLEDSLHDWVDEELENYRDD-DYLIFDCPGQIELFTHVPVLKNFVE 125

Query: 186 EAFASTFPTVIAYVVDTPRSSNPVTFMSNMLYACSILYKTRLPVVLVFNKTDV 237
                 F   + Y++D+   ++   F+S  + + + + +  LP V + +K D+
Sbjct: 126 HLKQKNFNVCVVYLLDSQFITDVTKFISGCMSSLAAMIQLELPHVNILSKMDL 177

[Close]

BLAST of CmaCh05G007750 vs. TAIR 10
Match: AT4G12790.3 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 4.1e-16
Identity = 52/173 (30.06%), Postives = 88/173 (50.87%), Query Frame = 0


Query: 66  IVIGMAGSGKTTFLHRLVCHTHASNIRGYVMNLDPAVMTLPFGANIDIRDTVRYKEVMKQ 125
           +VIG AGSGK+T+   L  H        +V+NLDPA     +   +DIR+ +  ++VM+ 
Sbjct: 6   LVIGPAGSGKSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIRELISLEDVMED 65

Query: 126 FNLGPNGGILTSLN-LFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTW-SASGAIIT 185
             LGPNG ++  +  L  +  D V   +E   D  DY++ D PGQIE+FT        + 
Sbjct: 66  LKLGPNGALMYCMEYLEDSLHDWVDEELENYRDD-DYLIFDCPGQIELFTHVPVLKNFVE 125

Query: 186 EAFASTFPTVIAYVVDTPRSSNPVTFMSNMLYACSILYKTRLPVVLVFNKTDV 237
                 F   + Y++D+   ++   F+S  + + + + +  LP V + +K D+
Sbjct: 126 HLKQKNFNVCVVYLLDSQFITDVTKFISGCMSSLAAMIQLELPHVNILSKMDL 177

The following BLAST results are available for this feature:

BLAST of CmaCh05G007750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W586	4.2e-143	71.73	GPN-loop GTPase QQT2 OS=Arabidopsis thaliana OX=3702 GN=QQT2 PE=1 SV=1	[more]
Q54C25	6.4e-99	52.97	GPN-loop GTPase 1 OS=Dictyostelium discoideum OX=44689 GN=gpn1 PE=3 SV=1	[more]
Q9HCN4	8.7e-96	52.97	GPN-loop GTPase 1 OS=Homo sapiens OX=9606 GN=GPN1 PE=1 SV=1	[more]
Q8VCE2	1.1e-93	53.41	GPN-loop GTPase 1 OS=Mus musculus OX=10090 GN=Gpn1 PE=1 SV=1	[more]
A4FUD1	3.1e-93	51.65	GPN-loop GTPase 1 OS=Bos taurus OX=9913 GN=GPN1 PE=2 SV=1	[more]

BLAST of CmaCh05G007750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21800.1	3.0e-144	71.73	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT4G21800.2	3.0e-144	71.73	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT4G12790.1	4.1e-16	30.06	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT4G12790.2	4.1e-16	30.06	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT4G12790.3	4.1e-16	30.06	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 309..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..406
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..406
None	No IPR available	PANTHER	PTHR21231:SF9	GPN-LOOP GTPASE	coord: 23..402
None	No IPR available	CDD	cd17870	GPN1	coord: 63..302 e-value: 4.1393E-167 score: 465.889
IPR004130	GPN-loop GTPase	PFAM	PF03029	ATP_bind_1	coord: 67..305 e-value: 5.7E-78 score: 262.0
IPR004130	GPN-loop GTPase	PANTHER	PTHR21231	XPA-BINDING PROTEIN 1-RELATED	coord: 23..402
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 62..320 e-value: 1.3E-96 score: 325.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 64..303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G007750.1	CmaCh05G007750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding