CmaCh05G006430 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G006430
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	syntaxin-32-like
Location	Cma_Chr05: 3249770 .. 3258731 (+)
RNA-Seq Expression	CmaCh05G006430
Synteny	CmaCh05G006430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAAAAAATGGGGAGCTGGGAATTGAATTGAAAATTGAATGAACTGCAATTAGGAAAATACGTACAAAATAATTCTCTGCCGATGGTTCTTAGGGTTTCCCCCCTTTTTGATTCTCTAATAGTTGCGGAATGCCCTCGAGAAATCGATGGCTTCGCTGCGAACTTTTGTTCTGATTCCGGATTTTTCCATTTCAATCGATTGAAACTACTTTCATTTTCGAGATTTTTCCTGCAAAATTGATCGAGGGGAATGTTACTGCATTTGAGTATTAGGGTTTGATTGTTCAAGGGTCTTCACGAGACTATTTCTTATGCGATTGCTTATGATTTTTGGTTAAATGCTTCAATCTGCTCAGTTTCTGCTACTTCTGAATTGATCGTGTGGACTGAGTTCTGTTCTTGGGGTTTCTTATCAATTAGCAGATGTTCATGATGTTTTTTTTTTTTACATTGCACAATGCTGCTCGGTTTCTGCTGATTCTGATGGATTTCTGAAACTATATTGTATTTCTGAATGAACCAAATAACGTTGTTGCAGAAAAGAAACTATGGTTTTGCAGGGGTTGGATTTTCAGAGTTGCGATTTGAAAAGCTGTGGAACATGTGGTTTAATTCGATGCAAAGCGAAGAACTTTACTGGGGCTTGATATGCTGTGAATCCTCTTGTAAGAGAGGGATGCCTTCGGGAACGCGGACATAGGAGGTGCATGGCTGTAGCCAGCTTGTGCCGTAAGGTGTTGGGTTAAATCCCGCAAATGTGGAGGAAGAGAACAAGGTTAGTTCAGAATGATCCATACAGATTGAATCAACTGAATGCCCCTTGTTCTGGTTCTATCTCTAGTTTCAAAAGATGTCACCTGTTTACTAGGTTGTCTCCTAAAGGGTTAGATTCTGATTCATCTAGAAGTCCAACTTCTCAGGATTTTTGGTAGTTTCTAGTTTAGGTAACCCTCTTAGAGCTCCCAGATCATTATCCAATGAGGGGCATAGATGGAGCTGGGATTCTAGTAAAGTAGGGCTGAGCTTGATAGATTCTTTAAATGACAATGATAGTAGTAAATTATTTGGGAAGAATCTCGATCATCCGGTAGTAAAACTGTTCTATTCGGGCTTCGAAGCGTGACCGAGAAGTCGAATTGTTCATCACGGGAAAATCATTACCAGGGACCTAAATCCTTGCCTAAAGCTTCCATTGAACTGGGAAACTCTGATAATTTTTGAAATTGGAGTAACCCCGTTACAATGCAAGTCTTTTGGGAACTACTCTGGTTCTTTTGAATCCTACAGGTCGTTTGCTCCTCGAGCTGGTTTAACTGGTCACAGCCTCGGTAGTTGTACTACTACCGAGAGCGTTGCTGCTCGTCGGTCAGCCAAAGGAGCTCGAGTGTCAGAAAAATGTCCCCTCATGAAACCTTGTTCAATTTTTTTAGGCATATCAGGTGACAGCATATCTAAGAGGTCTCTCTCAGCTAGTGAGATTGAGCTGTCTGAGGATTATACGTGTGTAATCTCACATCGTTCAAACCCGAAACCCGAAAACTAATATTTATGGTGACTGCATTTTAGATTTGAACTCAAATTATTCGAGCTCGTCTTCGGAGAACGAAATGAAGGAGCTGGATATCTTCACTTCATATTCCTTAAGTGGTTTCTTAAGCTTCTGCTATTCCTGGCACAAGAAACTGGAAGAGGGAAAAGACATCTACATTTATAGGTTTGTCACGATAAAACGTCTCGCATGCCTTTTACAGTTTCAAACCATTATGATTTAACTTGTAAACTGTTGCATGGGAGAGAAAGCCTTCTGTAGTAGTCTAACGTGTTGTTCCCACGAGATATCGATAGATGAAGAACTCGAGAAATTCATTGACAAAACCTCCTAGCGTTCTCCCAAGACAATGCTGACCATGATGAGGACCTTTTTGAAACCAGCATTGGTGGCTTTGCATAAAACTCGCCTCAATGGCTGGCCACCATGCCCGTGGTTGACGAACCTGTTGGAGGCAATCGACACACACCCTTTTGGTCATCTGTTTGTAAAGAGATGTTTTTATGTCCATTGGTGGCAGCCATGGATGATCATTTTTGTAAAGTGATGGTGTCTGCTTGCTTTGCTTCACCTCTCATGGTCTTTAGTGGATGATAATCTTTGGTCCTTCGGGCTCCGCCCCCATACACGGTCTTACGACTTTGCGGATGCTTGTATTTTTGGTAAACAGTCGTTCGGGCCTGGTCATTGCAACCTGCTTTGTGAGGAGGCACCCCTTCTCCTAAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACTTGTGTCGGTTTTGGGAATAGGTGCCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTAGGGGTTCTATCATAAACTTAACTGACCTGTGAACGAACGAGCTTTTCCTAGGATTTCTATCATAAACTTAACCGACCTGTGAGCCCACTGGGATATAAGACTTAAACATCTAACATTGTAGTCGATGATGTATATCTAATCTAGTTAAATTATGCTTAGGTTCACATCAAAGTTTAAATTTTGCTATGAATTTTTTTTAATGTAAGATACGGTAAATAAATTATGAAATTTTTAAAAATTAAAATTTTAAATAGCGAGCTTCTCACCTAAAATGTCTCGATATAATGTCTCTTCCAAGCTTTAAACTTTGGTCATATTTCTAATTAAATATGAAGTATATGATCACTTAATTCAAAATATCATATAATAATTACTACCTTCAACTTTGGTCGTATTTCTTATTAAATATGTATTTCTAATTAAATATGAATTATATGATCACTTAATTCAAAATATCAAGTTGTATTTTTTTTAAAAAAATTAAAAAAATTTCATTTTTAGGATTGGGTTTGAATAAATATTAAAAATAATTACTACATATCTTAATAGTTTTAGGAAATTTAATTTATTTAAACACTAGCTTTTGGGTTTATTGGAATTTTCGAGTCATTTAATTTTCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTGTAATTAATTAAGTCTAAACTCCCATAATTAAACGTGTAATTAATTCCCTAATTTAAACTATAATAACAAAATAAAAACAATTGGTTTTTTTGGTTTATTATTTTTGTAACTCATCGGCTAAACACACACAATATTATTATTATTATTATTATTATTTAAAAAATATTCTTTTTTTAGAATTTTTACTCGTTCTGGAAAACCAGTATGTTGAGATGAGCAGCCGGTAATTTCCTCCAATTTTCTTTTTCAGCGCCTCGTCTCAGCTTACTTAACTCTCTCCGTTACCGCCATCTTTGTTTTTCTTTTGTTCCCCCCAATTTGATGCTCTTTCGGCTTCAATTTCAATCTGTCATTGAACTCGATCCATTTCTCCCTCTTTTTGATCTGCAATTCGTTTCTTATTCGTTCGATTAAGCGCGTCGCCGGGATATTGAACTCTCTTTCTGGCTGATTGGGTGGAATGGTGATTTCGATCCAGATCTAGGGTTTTGCTTCCAATTCTTTCTGGCTTTTTTTGTTTCGCTTGATTTTCTCCTTGAGGATTGAGGGACTCGGATCTCGCGGCTGTTGAGGTAATTTAATTGTTCGTCCCACTGGTTTTTTCGTCGTGTCTTTGCAAATTTAGGTGTAAGGATGAAATATTTCGTTTAGATACGTGTAGTTGACGGCGTCCTTGCATCTCTTGGCGTAAATTGTAGTTTGAATACTTGGATTACTTTGCACCGACATTCTTCTAGACTGATTGGAATAAGGAAATTTCGCTTTGATTGAATCTAAGTTTCTTCGAATTGTTTTCTTTATTTCTATAGGAATGCGAATTCTATACGTCTACTGAAAGCTACGATCTGATTTTTTCCAAGTAATATTGACTAACATTGTGAAAATCAAGAAAAGATTATGGTAACGGAAAATATCTTGGAGTAGATGAGTTTTATTTTCTTAGTTCCGTAGGAGCTTAAGCTGACAATGGTCTCGATGTTCGACAATTAAAGTTCATTCATGCGAATGCTTTTCCTGATGTTGTTGTAGAGCTAGAGATTACGCGCTGAAGATGGCTGTCAAAACAGCACAATCATTTAGAGATCGGACGCTGGAATTCCAGAACATAACAGAGAGGCTAAAGAAGTCTTTCTCATCGAGCACGGGAACAACTGGACCTAGTGCTGGTTCAAAGTCAGAAGAGCAGCGCTCTGCTGTTGCTCTTCAGTCTGAATTCAATAAGAGGGCTTCCAAGGTTGGATTAGGGATACACCAGACGTCTCAGAAACTCTCAAAGTTGGCAAAATGTAAGTAGTTGAATTGGAAGTAATCTATGGTGCATCTGCGCAGTCTTGTATCCTGTAGTTCAGACCAGACGCCATTTTCAATAAATTTTATCATCTAAGCCTGTCATATTAATCATTAGTTAAATTGCTAAGTTTTAAAGTTTGAGCAATTCCTTGTTAAATTCCATTAATTTCAGGACCATAATCAGAAAAAGATTGGTAAGTTTCATAATGCATTATGCCATGGTAGATGTTTGGTAACGTATTGGGTAGTTCTAACAATCTAAGTAGGTACTGAACATTTTCCTTGAGATTCCGTTTATTTATCGAAAGTATATTTTAAACTCTGAAAAAACTGCTGCTGTGGTTCATTCCTTTTGTAAATTGTAACTTCTTGACACCTTAAAATTTTAGGCAGTTGATTTTATGTAGTTTGCAAAATGCAAGGGTGACTAGGGAAGAAACATTTATCTGTTTCACGTGGGTTGGTTTTGTTTTTAGTTACATTATTGAGCTTAATGGAGAATGCCTAATGTTGCATATGAAAATAAATTTTCTTAAAGGTATTGCATGAAGCATGACAGTGAAAGTTTCTAATTTTCTGATTGAGTTTTGACGTTCACATCATGATTTCCAGTGGCAAAGAGGACTTCAGTTTTTGATGACCCAACAATGGAAATTCAGGAGCTAACTGCTCTTATTAAGCAGGACATTACAACCTTGAACTCTGCCGTTGTAGATCTTCAGCTTCTCTGCAACTCTAGAAATGAAAATGGAAACATATCCAGTGATACTACTAGTCATTCAACCACTGTGGTAGATGATCTTAAGAATCGACTGATGAGCACCACAAAAGAGTTTAAAGAAGTTCTAACCATGCGAACTGAAGTAAGCTCGTGCACTGCATTTTTTTTCCTCGATTGGCTTTTATCTATCTCAGTGACAGACTTTTCCAGATTTTTTTTTAATACTTACGTTATTTGTTGGTTTAATGAAGAATTTGAAGGTTCATGAGAATAGAAGACAACTATTTTCTTCTACTGCTTCAAAGGAATCTACCAATCCTTTTGTGCGCCAGCGTCCATTAGCTTCCAGGTCAGCTGCTGGTGCCTCAAGTGCGCCCCCTCCTCCATGGGCCAAGGCGTCCACATCTTTTTCTAAAACATCTCCCGGGTGAGAATTTTTTAATTGTTTCAGTTGATATATTCACACCCTTCTATTTATGCAAAGCATCTTCTTAGTTGTTTTAGATGATAGTGGGATATGTTCAAAATATAATTTTGGGTTTATGGTGCTTGCAAATGTGCTTTCCCCAACTTGCAGTCATAAAAATGATAAAAAAAATACATCTCCTCTGAATTGCCTCATGAACTTTATAATATGTCCCAAATTACTCAAGTGTAGGAAACTGTGTGAGAACGGGGGAGCCGTGTGAGAGGATAATCATGTATTTGTGTGGGGCCCATAGGTTTTATTAGTTATGTGAGAGGCTTCGGGGGTGGAGGTTTACTGGGGAGAGTTGTTTTGTGGTGAGGGTATCTTTTTGGGTTTGGTTTTCTGGAACTTGTCTTTTGAGTAAGAGAGGTGGGGAGCTCTCAAAACTTTTCTTGGCTGCAGTGTATTGATGAATAAAATTGTTGGCTTAGGGCTATCACTTTACTGTTTGACTCTCGTCCACTCTCTCCCTCTTTCTCACACACAAACACACGAGAAAATTTCCAACACACTTCTCCTCCTTCACAAGCAATTCCAAGCAAAATTTCCTCTTTAATTAATATCTACGATCTTCAAATTCATAGTATCCCTCCAGCGTCCCCAATTTGATTTTTAAAATTTATTTGAGTTAATTATTGTGAGTTTCAACTATGAATGTTATATCATGGAATACTTGAGGATTTGGGGATGATACTAAACAAACAACTTCGAAGAAATTTATCCAGCTTTTCTACCTAGATTTGGTATTAATTCAAGAGATCAAGATTGGAATTTTTAACCAAAAATTGATCAAATTCTTTGCTTGATAGCATTCTTGTTTCAAAAGAATGAGATCAGTTGTTGGACAATTCAAGGGTATCAAGACAAGTTTGTATTTTTTCTGACTATTCTCCTTTACTTTTGGAAGCTGGAAGTTTTGTTTGAGGGTCTTCCCCTTTTAGATTTCATAACAGTTGGATGTAAATGTTAGATTTTGAGTTGACTTCAGCAGTTATCCTTTGTGATTCAATGAAAATTCTATCCTGGAACACGGGGGTTGGGGGATTATTTGAAAATACTCAGTTTGAAGAAGTTTCTGCAGCACCGTTGTCCTGACTTGGTTCTTCTACAAGAATCAAATGTTGGTATATTTTATTCAAAGATCATTAAATTCATGTGGAGTTACAAAGTAGCACTTTACGTTCCAGTGTTTAATGCTTAGGTTGGAGAAAAGGTGGTTGATGTAACGTTCATTTTGGCTTTTTCCAAAAGAGTTTTGCATGCTCCGATTTTTATATTTTGGTTGGTTAGGGGCTGGAGTCATATTTTGGTTGGTTAGGAGTTGATACAACTTAATGAAGAGCTTTTAAAAGACGCTTCACTGGAGGAGCTAGTGGCCGATAAGCTTTATTATTCCCAGTGTTGAGCTCTATTTGATTGTAATTGCCTCTAGGTTCTTGATTTTTCTTTTTCTTTATCTATTTACACTCCCTTTGGGAGTCTATATTACTTGAACATTTCATTTTCATTATGCCAATAGAAGTTTTTTGTTCCAAAAAAAAAGATCTTTGGAGTAAGTGCTTGACTTCGCTCTTTTCTTGGCTCCCTATTGGTGTAAAAATGTTTTACATTTTAGTAATTATTCTAAACTCTCTTATATCCAGCTGGAGAAGTTTTTTACAATCTCTTTTGGATGGGTTCCCCCTTTTGTACATTTCATTTAATCCATGAAATTGTTTCCTATCAAAGGAAAGGAAAAAAAAAAAAAAAAAAAACGCTTGAACTCTAAATTTCGAGAAGAGGCAAATGAAGCACACCAAACCCAATGTTTACCTGGTGGTTCCTTGAACAATTTGCTATTCCTTTCTACCCAGTAACCTTATCTCCTGAACAATCGCCCTGCTGCTTTCTTACCATATTTGTTTGAGCATGGCCCTAGTCACCATAAGCAACTAAATTATAGCTTAAAATTTTAAAGGATAAACTCAACCATTTGATGTATGAAGTCTCTTAAATTACCAGGACAACGACATTGAATCCCAGTTTGCATTTATTATTGTTTTTGGTGAAAATTGCTGTACTTGTAAAATGACCATTTTAGAAATGCTCATCTATCTCATTCACTCTCTTTGGATCAGTATTTGACTTAGAAATTATTATTGTCAACCCAAGGATTTTAAATTCATCGTTAGTGCCAATTGGAGGAATATTCGTTAGGTCTTTACTTGGATTGATGTCTTCTCTGCTGCTGCTGCTAATGGAAGTTCACATGTAGCTCTTATATATATATAGAAGATCATAACTTCATTGTTGTGCTATATTTCTTTTGTCGTGCTGTTTCTACTTTCCTGCCGAAGTTAATTTAACGATTATTATGTGGTGTAATGAAAATTATGTTGCTTGTAAATTTACAGGAAGCAGGTGGATGGGGAGAGTCAACCATTGTTACAGCAGCAGCAACAGCAACAGCAGCAGATGGTTCCATTACAAGACACTTACATGCAGAGCCGAGCTGAAGCTCTTCAAAATGTAGAATCCACCATTCATGAATTGAGCAATATCTTCAACCAGCTGGCCACTCTGGTTTCTGAACAAGGAGAGATTGCTATCAGGTTCTACCCTCTTGCACCTACTTCAGAATCTCTGATTACATAATTACTTGTGTTGCAAACAAAGCATGAAGTATATGGTCTCAGTATCCATTACATTCAAGTAGATTTTGAACCTTAAAGAGCTTGATGTGCTACACAAGAACAATTAATTTGAACATCACACCAATTGTATGTCTACAAAATATCTGGTTAAAATACGTGATATATATTTTCACTGTTGGAACATACAGTAGCCTATATAAATACATTTTCCGTATGGCATAAGTCTCATCCAACTAGCTTACAGTTCAAAAGTTAATTTGGGTCGGTTTATGCAGGATCGATGAGAACATGGACGATACTCTGTCAAATGTGGAGGGGGCACAGGGTGCATTGCTCAAGTATCTAAACAGTATATCATCAAATAGGTGGCTGATGATCAAAATTTTCTTTGTACTAATATTCTTCCTCATGGTTTTCCTATTTTTTGTGGCATAGTGGTTGAAGAGAGAGTTGTAATTGGAAAAATGAAGAGAAGAAAATTGGTTTTTTGCTGTCTATTAATATCCCTTCGTATTCTTTTTTCATATACCTCCTCCTCCTGTTAGTCAGTCGGTCAGTCACTCCCTCCCATGCATATTATTATACTTTTCAGACGGAAGATCTGGGATTCTTCTGGTCCAGTATAATATAATGTTGATAATGTTGTCAGTTTGTGAATTGTAAGAGGCGTTAATTACTTCTTGACAATTGCCAAAACATATGGCGAACCCTCTTTTTTCTCAGTAATTTATAACTATGGTTTCTGTCT

mRNA sequence

GTGAAAAAATGGGGAGCTGGGAATTGAATTGAAAATTGAATGAACTGCAATTAGGAAAATACGTACAAAATAATTCTCTGCCGATGGTTCTTAGGGTTTCCCCCCTTTTTGATTCTCTAATAGTTGCGGAATGCCCTCGAGAAATCGATGGCTTCGCTGCGAACTTTTGTTCTGATTCCGGATTTTTCCATTTCAATCGATTGAAACTACTTTCATTTTCGAGATTTTTCCTGCAAAATTGATCGAGGGGAATGTTACTGCATTTGAGTATTAGGGTTTGATTGTTCAAGGGTCTTCACGAGACTATTTCTTATGCGATTGCTTATGATTTTTGGTTAAATGCTTCAATCTGCTCAGTTTCTGCTACTTCTGAATTGATCGTGTGGACTGAGTTCTGTTCTTGGGGTTTCTTATCAATTAGCAGATGTTCATGATGTTTTTTTTTTTTACATTGCACAATGCTGCTCGGTTTCTGCTGATTCTGATGGATTTCTGAAACTATATTGTATTTCTGAATGAACCAAATAACGTTGTTGCAGAAAAGAAACTATGGTTTTGCAGGGGTTGGATTTTCAGAGTTGCGATTTGAAAAGCTGTGGAACATGTGGTTTAATTCGATGCAAAGCGAAGAACTTTACTGGGGCTTGATATGCTGTGAATCCTCTTGTAAGAGAGGGATGCCTTCGGGAACGCGGACATAGGAGGTGCATGGCTGTAGCCAGCTTGTGCCGTAAGGTGTTGGGTTAAATCCCGCAAATGTGGAGGAAGAGAACAAGAGCTAGAGATTACGCGCTGAAGATGGCTGTCAAAACAGCACAATCATTTAGAGATCGGACGCTGGAATTCCAGAACATAACAGAGAGGCTAAAGAAGTCTTTCTCATCGAGCACGGGAACAACTGGACCTAGTGCTGGTTCAAAGTCAGAAGAGCAGCGCTCTGCTGTTGCTCTTCAGTCTGAATTCAATAAGAGGGCTTCCAAGGTTGGATTAGGGATACACCAGACGTCTCAGAAACTCTCAAAGTTGGCAAAATTGGCAAAGAGGACTTCAGTTTTTGATGACCCAACAATGGAAATTCAGGAGCTAACTGCTCTTATTAAGCAGGACATTACAACCTTGAACTCTGCCGTTGTAGATCTTCAGCTTCTCTGCAACTCTAGAAATGAAAATGGAAACATATCCAGTGATACTACTAGTCATTCAACCACTGTGGTAGATGATCTTAAGAATCGACTGATGAGCACCACAAAAGAGTTTAAAGAAGTTCTAACCATGCGAACTGAAAATTTGAAGGTTCATGAGAATAGAAGACAACTATTTTCTTCTACTGCTTCAAAGGAATCTACCAATCCTTTTGTGCGCCAGCGTCCATTAGCTTCCAGGTCAGCTGCTGGTGCCTCAAGTGCGCCCCCTCCTCCATGGGCCAAGGCGTCCACATCTTTTTCTAAAACATCTCCCGGGAAGCAGGTGGATGGGGAGAGTCAACCATTGTTACAGCAGCAGCAACAGCAACAGCAGCAGATGGTTCCATTACAAGACACTTACATGCAGAGCCGAGCTGAAGCTCTTCAAAATGTAGAATCCACCATTCATGAATTGAGCAATATCTTCAACCAGCTGGCCACTCTGGTTTCTGAACAAGGAGAGATTGCTATCAGGATCGATGAGAACATGGACGATACTCTGTCAAATGTGGAGGGGGCACAGGGTGCATTGCTCAAGTATCTAAACAGTATATCATCAAATAGGTGGCTGATGATCAAAATTTTCTTTGTACTAATATTCTTCCTCATGGTTTTCCTATTTTTTGTGGCATAGTGGTTGAAGAGAGAGTTGTAATTGGAAAAATGAAGAGAAGAAAATTGGTTTTTTGCTGTCTATTAATATCCCTTCGTATTCTTTTTTCATATACCTCCTCCTCCTGTTAGTCAGTCGGTCAGTCACTCCCTCCCATGCATATTATTATACTTTTCAGACGGAAGATCTGGGATTCTTCTGGTCCAGTATAATATAATGTTGATAATGTTGTCAGTTTGTGAATTGTAAGAGGCGTTAATTACTTCTTGACAATTGCCAAAACATATGGCGAACCCTCTTTTTTCTCAGTAATTTATAACTATGGTTTCTGTCT

Coding sequence (CDS)

ATGTGGAGGAAGAGAACAAGAGCTAGAGATTACGCGCTGAAGATGGCTGTCAAAACAGCACAATCATTTAGAGATCGGACGCTGGAATTCCAGAACATAACAGAGAGGCTAAAGAAGTCTTTCTCATCGAGCACGGGAACAACTGGACCTAGTGCTGGTTCAAAGTCAGAAGAGCAGCGCTCTGCTGTTGCTCTTCAGTCTGAATTCAATAAGAGGGCTTCCAAGGTTGGATTAGGGATACACCAGACGTCTCAGAAACTCTCAAAGTTGGCAAAATTGGCAAAGAGGACTTCAGTTTTTGATGACCCAACAATGGAAATTCAGGAGCTAACTGCTCTTATTAAGCAGGACATTACAACCTTGAACTCTGCCGTTGTAGATCTTCAGCTTCTCTGCAACTCTAGAAATGAAAATGGAAACATATCCAGTGATACTACTAGTCATTCAACCACTGTGGTAGATGATCTTAAGAATCGACTGATGAGCACCACAAAAGAGTTTAAAGAAGTTCTAACCATGCGAACTGAAAATTTGAAGGTTCATGAGAATAGAAGACAACTATTTTCTTCTACTGCTTCAAAGGAATCTACCAATCCTTTTGTGCGCCAGCGTCCATTAGCTTCCAGGTCAGCTGCTGGTGCCTCAAGTGCGCCCCCTCCTCCATGGGCCAAGGCGTCCACATCTTTTTCTAAAACATCTCCCGGGAAGCAGGTGGATGGGGAGAGTCAACCATTGTTACAGCAGCAGCAACAGCAACAGCAGCAGATGGTTCCATTACAAGACACTTACATGCAGAGCCGAGCTGAAGCTCTTCAAAATGTAGAATCCACCATTCATGAATTGAGCAATATCTTCAACCAGCTGGCCACTCTGGTTTCTGAACAAGGAGAGATTGCTATCAGGATCGATGAGAACATGGACGATACTCTGTCAAATGTGGAGGGGGCACAGGGTGCATTGCTCAAGTATCTAAACAGTATATCATCAAATAGGTGGCTGATGATCAAAATTTTCTTTGTACTAATATTCTTCCTCATGGTTTTCCTATTTTTTGTGGCATAG

Protein sequence

MWRKRTRARDYALKMAVKTAQSFRDRTLEFQNITERLKKSFSSSTGTTGPSAGSKSEEQRSAVALQSEFNKRASKVGLGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTALIKQDITTLNSAVVDLQLLCNSRNENGNISSDTTSHSTTVVDDLKNRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSTASKESTNPFVRQRPLASRSAAGASSAPPPPWAKASTSFSKTSPGKQVDGESQPLLQQQQQQQQQMVPLQDTYMQSRAEALQNVESTIHELSNIFNQLATLVSEQGEIAIRIDENMDDTLSNVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA

Homology

[Close]

BLAST of CmaCh05G006430 vs. ExPASy Swiss-Prot
Match: Q9LK09 (Syntaxin-32 OS=Arabidopsis thaliana OX=3702 GN=SYP32 PE=2 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 2.0e-104
Identity = 232/341 (68.04%), Postives = 274/341 (80.35%), Query Frame = 0


Query: 22  SFRDRTLEFQNITERLKKSFSSSTGTTGPSAGSKSEE--QRSAVALQSEFNKRASKVGLG 81
           S+RDR+ EF  I E L++S + +        G+   +  +R  +  +SEFNKRAS +GL 
Sbjct: 9   SYRDRSDEFFKIVETLRRSIAPAPAANNVPYGNNRNDGARREDLINKSEFNKRASHIGLA 68

Query: 82  IHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTALIKQDITTLNSAVVDLQLLCNSRNENG 141
           I+QTSQKLSKLAKLAKRTSVFDDPT EIQELT +IKQ+I+ LNSA+VDLQL  +S+N+ G
Sbjct: 69  INQTSQKLSKLAKLAKRTSVFDDPTQEIQELTVVIKQEISALNSALVDLQLFRSSQNDEG 128

Query: 142 NIS--SDTTSHSTTVVDDLKNRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSTASKEST 201
           N S   D ++HS TVVDDLK RLM TTKEFK+VLTMRTEN+KVHE+RRQLFSS ASKEST
Sbjct: 129 NNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTENMKVHESRRQLFSSNASKEST 188

Query: 202 NPFVRQRPLASRSAAGASSAPPPPWAK-ASTSFSKTSPGKQVDGESQPLL----QQQQQQ 261
           NPFVRQRPLA+++A  AS + P PWA  +S+S S+  P K  +GES PLL    QQQQQQ
Sbjct: 189 NPFVRQRPLAAKAA--ASESVPLPWANGSSSSSSQLVPWKPGEGESSPLLQQSQQQQQQQ 248

Query: 262 QQQMVPLQDTYMQSRAEALQNVESTIHELSNIFNQLATLVSEQGEIAIRIDENMDDTLSN 321
           QQQMVPLQDTYMQ RAEAL  VESTIHELS+IF QLAT+VS+QGEIAIRID+NM+DTL+N
Sbjct: 249 QQQMVPLQDTYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEIAIRIDQNMEDTLAN 308

Query: 322 VEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 354
           VEGAQ  L +YLNSISSNRWLM+KIFFVLI FLM+FLFFVA
Sbjct: 309 VEGAQSQLARYLNSISSNRWLMMKIFFVLIAFLMIFLFFVA 347

[Close]

BLAST of CmaCh05G006430 vs. ExPASy Swiss-Prot
Match: Q9FFK1 (Syntaxin-31 OS=Arabidopsis thaliana OX=3702 GN=SYP31 PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 8.1e-66
Identity = 170/349 (48.71%), Postives = 226/349 (64.76%), Query Frame = 0


Query: 22  SFRDRTLEFQNITERLKKSFSSSTGTTGPSAGSKSEEQRSAVALQSEFNKRASKVGLGIH 81
           +FRDRT+E  ++++ LKK    +  +        +  +RS+    SEFNK+AS++GLGI 
Sbjct: 4   TFRDRTVELHSLSQTLKK--IGAIPSVHQDEDDPASSKRSSPG--SEFNKKASRIGLGIK 63

Query: 82  QTSQKLSKLAKLAKRTSVFDDPTMEIQELTALIKQDITTLNSAVVDLQLLCNSRNENGNI 141
           +TSQK+++LAKLAK++++F+D T+EIQELT LI+ DIT LN A+ DLQ L N    +GN 
Sbjct: 64  ETSQKITRLAKLAKQSTIFNDRTVEIQELTVLIRNDITGLNMALSDLQTLQNMELADGNY 123

Query: 142 SSDTTSHSTTVVDDLKNRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSTASKESTNPFV 201
           S D   H T V DDLK RLM  TK+ ++VLT R+EN+K HENR+QLFS+           
Sbjct: 124 SQDQVGHYTAVCDDLKTRLMGATKQLQDVLTTRSENMKAHENRKQLFST----------- 183

Query: 202 RQRPLASRSAAGASSAP-PPPWAKASTSFSK------------TSPGKQVDG----ESQP 261
            +  + S     A S P PPPW+ +S  F                PG Q+      E+ P
Sbjct: 184 -KNAVDSPPQNNAKSVPEPPPWSSSSNPFGNLQQPLLPPLNTGAPPGSQLRRRSAIENAP 243

Query: 262 LLQQQQQQQQQMVPLQDTYMQSRAEALQNVESTIHELSNIFNQLATLVSEQGEIAIRIDE 321
             Q +    QQ VP Q+ Y QSRA AL +VES I ELS IF QLAT+V++QGE+AIRID+
Sbjct: 244 SQQMEMSLLQQTVPKQENYSQSRAVALHSVESRITELSGIFPQLATMVTQQGELAIRIDD 303

Query: 322 NMDDTLSNVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 354
           NMD++L NVEGA+ ALL++L  ISSNRWLM+KIF V+I FL+VFLFFVA
Sbjct: 304 NMDESLVNVEGARSALLQHLTRISSNRWLMMKIFAVIILFLIVFLFFVA 336

[Close]

BLAST of CmaCh05G006430 vs. ExPASy Swiss-Prot
Match: Q8K1E0 (Syntaxin-5 OS=Mus musculus OX=10090 GN=Stx5 PE=1 SV=3)

HSP 1 Score: 164.1 bits (414), Expect = 2.9e-39
Identity = 134/342 (39.18%), Postives = 186/342 (54.39%), Query Frame = 0


Query: 12  ALKMAVKTAQSFRDRTLEFQNITERLKKSFSSSTGTTGPSAGSKSEEQRSAVALQSEFNK 71
           AL  +     S RDRT EFQ+  + L +S  +   T+ P+          A    SEF  
Sbjct: 46  ALVPSPPDTMSCRDRTQEFQSACKSL-QSRQNGIQTSKPAL--------HAARQCSEFTL 105

Query: 72  RASKVGLGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTALIKQDITTLNSAVVDLQLL 131
            A ++G  +  T  KL KL  LAKR S+FDD  +EI+ELT +IKQDI +LN  +  LQ  
Sbjct: 106 MARRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDF 165

Query: 132 CNSRNENGNISSDTTSHSTTVVDDLKNRLMSTTKEFKEVLTMRTENLKVHENRRQLFSST 191
             ++         T  HS T+V  L+++L S + +FK VL +RTENLK   NRR+ FS  
Sbjct: 166 VRAKGSQSGRHLQT--HSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRNRREQFSRA 225

Query: 192 ASKESTNPFVRQRPLASRSAAGASSAPPPPWAKASTSFSKTSPGKQVDGESQPLLQQQQQ 251
                    V   PLA  +  G      P    A    S+ S    +D     ++  +  
Sbjct: 226 P--------VSALPLAPNNLGGG-----PIILGAE---SRASRDVAID-----MMDPRTS 285

Query: 252 QQQQMVPLQDTYMQSRAEALQNVESTIHELSNIFNQLATLVSEQGEIAIRIDENMDDTLS 311
           QQ Q++  QD+Y+QSRA+ +QN+ESTI EL +IF QLA +V EQ E   RIDEN+     
Sbjct: 286 QQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQL 345

Query: 312 NVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 354
           +VE A   +LKY  S++SNRWLM+KIF +LI F ++F+ F+A
Sbjct: 346 DVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA 355

[Close]

BLAST of CmaCh05G006430 vs. ExPASy Swiss-Prot
Match: Q08DB5 (Syntaxin-5 OS=Bos taurus OX=9913 GN=STX5 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.5e-39
Identity = 129/332 (38.86%), Postives = 180/332 (54.22%), Query Frame = 0


Query: 22  SFRDRTLEFQNITERLKKSFSSSTGTTGPSAGSKSEEQRSAVALQSEFNKRASKVGLGIH 81
           S RDRT EF +  + L+   S   G        ++  QR      SEF   A ++G  + 
Sbjct: 56  SCRDRTQEFLSACKSLQ---SRQNGIQANKPALRAVRQR------SEFTLMAKRIGKDLS 115

Query: 82  QTSQKLSKLAKLAKRTSVFDDPTMEIQELTALIKQDITTLNSAVVDLQLLCNSRNENGNI 141
            T  KL KL  LAKR S+FDD  +EI+ELT +IKQDI +LN  +  LQ    ++      
Sbjct: 116 NTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGR 175

Query: 142 SSDTTSHSTTVVDDLKNRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSTASKESTNPFV 201
              T  HS T+V  L+++L S + +FK VL +RTENLK   +RR+ FS           V
Sbjct: 176 HLQT--HSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAP--------V 235

Query: 202 RQRPLASRSAAGASSAPPPPWAKASTSFSKTSPGKQVDGESQPLLQQQQQQQQQMVPLQD 261
              PLA     G         A    + S+ S    +D     ++  +  QQ Q++  QD
Sbjct: 236 SALPLAPNHLGGG--------AVVLGAESRASGDVAID-----MMDSRTSQQLQLIDEQD 295

Query: 262 TYMQSRAEALQNVESTIHELSNIFNQLATLVSEQGEIAIRIDENMDDTLSNVEGAQGALL 321
           +Y+QSRA+ +QN+ESTI EL +IF QLA +V EQ E   RIDEN+     +VE A   +L
Sbjct: 296 SYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEIL 355

Query: 322 KYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 354
           KY  S++SNRWLM+KIF +LI F ++F+ F+A
Sbjct: 356 KYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA 355

[Close]

BLAST of CmaCh05G006430 vs. ExPASy Swiss-Prot
Match: Q13190 (Syntaxin-5 OS=Homo sapiens OX=9606 GN=STX5 PE=1 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 8.5e-39
Identity = 128/332 (38.55%), Postives = 180/332 (54.22%), Query Frame = 0


Query: 22  SFRDRTLEFQNITERLKKSFSSSTGTTGPSAGSKSEEQRSAVALQSEFNKRASKVGLGIH 81
           S RDRT EF +  + L+         T  +    ++    AV  +SEF   A ++G  + 
Sbjct: 56  SCRDRTQEFLSACKSLQ---------TRQNGIQTNKPALRAVRQRSEFTLMAKRIGKDLS 115

Query: 82  QTSQKLSKLAKLAKRTSVFDDPTMEIQELTALIKQDITTLNSAVVDLQLLCNSRNENGNI 141
            T  KL KL  LAKR S+FDD  +EI+ELT +IKQDI +LN  +  LQ    ++      
Sbjct: 116 NTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGR 175

Query: 142 SSDTTSHSTTVVDDLKNRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSTASKESTNPFV 201
              T  HS T+V  L+++L S + +FK VL +RTENLK   +RR+ FS           V
Sbjct: 176 HLQT--HSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAP--------V 235

Query: 202 RQRPLASRSAAGASSAPPPPWAKASTSFSKTSPGKQVDGESQPLLQQQQQQQQQMVPLQD 261
              PLA     G         A    + S  S    +D     ++  +  QQ Q++  QD
Sbjct: 236 SALPLAPNHLGGG--------AVVLGAESHASKDVAID-----MMDSRTSQQLQLIDEQD 295

Query: 262 TYMQSRAEALQNVESTIHELSNIFNQLATLVSEQGEIAIRIDENMDDTLSNVEGAQGALL 321
           +Y+QSRA+ +QN+ESTI EL +IF QLA +V EQ E   RIDEN+     +VE A   +L
Sbjct: 296 SYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEIL 355

Query: 322 KYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 354
           KY  S++SNRWLM+KIF +LI F ++F+ F+A
Sbjct: 356 KYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA 355

[Close]

BLAST of CmaCh05G006430 vs. TAIR 10
Match: AT3G24350.1 (syntaxin of plants 32 )

HSP 1 Score: 380.6 bits (976), Expect = 1.4e-105
Identity = 232/341 (68.04%), Postives = 274/341 (80.35%), Query Frame = 0


Query: 22  SFRDRTLEFQNITERLKKSFSSSTGTTGPSAGSKSEE--QRSAVALQSEFNKRASKVGLG 81
           S+RDR+ EF  I E L++S + +        G+   +  +R  +  +SEFNKRAS +GL 
Sbjct: 9   SYRDRSDEFFKIVETLRRSIAPAPAANNVPYGNNRNDGARREDLINKSEFNKRASHIGLA 68

Query: 82  IHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTALIKQDITTLNSAVVDLQLLCNSRNENG 141
           I+QTSQKLSKLAKLAKRTSVFDDPT EIQELT +IKQ+I+ LNSA+VDLQL  +S+N+ G
Sbjct: 69  INQTSQKLSKLAKLAKRTSVFDDPTQEIQELTVVIKQEISALNSALVDLQLFRSSQNDEG 128

Query: 142 NIS--SDTTSHSTTVVDDLKNRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSTASKEST 201
           N S   D ++HS TVVDDLK RLM TTKEFK+VLTMRTEN+KVHE+RRQLFSS ASKEST
Sbjct: 129 NNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTENMKVHESRRQLFSSNASKEST 188

Query: 202 NPFVRQRPLASRSAAGASSAPPPPWAK-ASTSFSKTSPGKQVDGESQPLL----QQQQQQ 261
           NPFVRQRPLA+++A  AS + P PWA  +S+S S+  P K  +GES PLL    QQQQQQ
Sbjct: 189 NPFVRQRPLAAKAA--ASESVPLPWANGSSSSSSQLVPWKPGEGESSPLLQQSQQQQQQQ 248

Query: 262 QQQMVPLQDTYMQSRAEALQNVESTIHELSNIFNQLATLVSEQGEIAIRIDENMDDTLSN 321
           QQQMVPLQDTYMQ RAEAL  VESTIHELS+IF QLAT+VS+QGEIAIRID+NM+DTL+N
Sbjct: 249 QQQMVPLQDTYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEIAIRIDQNMEDTLAN 308

Query: 322 VEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 354
           VEGAQ  L +YLNSISSNRWLM+KIFFVLI FLM+FLFFVA
Sbjct: 309 VEGAQSQLARYLNSISSNRWLMMKIFFVLIAFLMIFLFFVA 347

[Close]

BLAST of CmaCh05G006430 vs. TAIR 10
Match: AT3G24350.2 (syntaxin of plants 32 )

HSP 1 Score: 369.8 bits (948), Expect = 2.5e-102
Identity = 231/355 (65.07%), Postives = 274/355 (77.18%), Query Frame = 0


Query: 22  SFRDRTLEFQNITERLKKSFSSSTGTTGPSAGSKSEE--QRSAVALQSEFNKRASKVGLG 81
           S+RDR+ EF  I E L++S + +        G+   +  +R  +  +SEFNKRAS +GL 
Sbjct: 9   SYRDRSDEFFKIVETLRRSIAPAPAANNVPYGNNRNDGARREDLINKSEFNKRASHIGLA 68

Query: 82  IHQTSQKLSKLAK--------------LAKRTSVFDDPTMEIQELTALIKQDITTLNSAV 141
           I+QTSQKLSKLAK              +AKRTSVFDDPT EIQELT +IKQ+I+ LNSA+
Sbjct: 69  INQTSQKLSKLAKRIRMVLRSRTDLFSVAKRTSVFDDPTQEIQELTVVIKQEISALNSAL 128

Query: 142 VDLQLLCNSRNENGNIS--SDTTSHSTTVVDDLKNRLMSTTKEFKEVLTMRTENLKVHEN 201
           VDLQL  +S+N+ GN S   D ++HS TVVDDLK RLM TTKEFK+VLTMRTEN+KVHE+
Sbjct: 129 VDLQLFRSSQNDEGNNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTENMKVHES 188

Query: 202 RRQLFSSTASKESTNPFVRQRPLASRSAAGASSAPPPPWAK-ASTSFSKTSPGKQVDGES 261
           RRQLFSS ASKESTNPFVRQRPLA+++A  AS + P PWA  +S+S S+  P K  +GES
Sbjct: 189 RRQLFSSNASKESTNPFVRQRPLAAKAA--ASESVPLPWANGSSSSSSQLVPWKPGEGES 248

Query: 262 QPLL----QQQQQQQQQMVPLQDTYMQSRAEALQNVESTIHELSNIFNQLATLVSEQGEI 321
            PLL    QQQQQQQQQMVPLQDTYMQ RAEAL  VESTIHELS+IF QLAT+VS+QGEI
Sbjct: 249 SPLLQQSQQQQQQQQQQMVPLQDTYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEI 308

Query: 322 AIRIDENMDDTLSNVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 354
           AIRID+NM+DTL+NVEGAQ  L +YLNSISSNRWLM+KIFFVLI FLM+FLFFVA
Sbjct: 309 AIRIDQNMEDTLANVEGAQSQLARYLNSISSNRWLMMKIFFVLIAFLMIFLFFVA 361

[Close]

BLAST of CmaCh05G006430 vs. TAIR 10
Match: AT5G05760.1 (syntaxin of plants 31 )

HSP 1 Score: 252.3 bits (643), Expect = 5.8e-67
Identity = 170/349 (48.71%), Postives = 226/349 (64.76%), Query Frame = 0


Query: 22  SFRDRTLEFQNITERLKKSFSSSTGTTGPSAGSKSEEQRSAVALQSEFNKRASKVGLGIH 81
           +FRDRT+E  ++++ LKK    +  +        +  +RS+    SEFNK+AS++GLGI 
Sbjct: 4   TFRDRTVELHSLSQTLKK--IGAIPSVHQDEDDPASSKRSSPG--SEFNKKASRIGLGIK 63

Query: 82  QTSQKLSKLAKLAKRTSVFDDPTMEIQELTALIKQDITTLNSAVVDLQLLCNSRNENGNI 141
           +TSQK+++LAKLAK++++F+D T+EIQELT LI+ DIT LN A+ DLQ L N    +GN 
Sbjct: 64  ETSQKITRLAKLAKQSTIFNDRTVEIQELTVLIRNDITGLNMALSDLQTLQNMELADGNY 123

Query: 142 SSDTTSHSTTVVDDLKNRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSTASKESTNPFV 201
           S D   H T V DDLK RLM  TK+ ++VLT R+EN+K HENR+QLFS+           
Sbjct: 124 SQDQVGHYTAVCDDLKTRLMGATKQLQDVLTTRSENMKAHENRKQLFST----------- 183

Query: 202 RQRPLASRSAAGASSAP-PPPWAKASTSFSK------------TSPGKQVDG----ESQP 261
            +  + S     A S P PPPW+ +S  F                PG Q+      E+ P
Sbjct: 184 -KNAVDSPPQNNAKSVPEPPPWSSSSNPFGNLQQPLLPPLNTGAPPGSQLRRRSAIENAP 243

Query: 262 LLQQQQQQQQQMVPLQDTYMQSRAEALQNVESTIHELSNIFNQLATLVSEQGEIAIRIDE 321
             Q +    QQ VP Q+ Y QSRA AL +VES I ELS IF QLAT+V++QGE+AIRID+
Sbjct: 244 SQQMEMSLLQQTVPKQENYSQSRAVALHSVESRITELSGIFPQLATMVTQQGELAIRIDD 303

Query: 322 NMDDTLSNVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 354
           NMD++L NVEGA+ ALL++L  ISSNRWLM+KIF V+I FL+VFLFFVA
Sbjct: 304 NMDESLVNVEGARSALLQHLTRISSNRWLMMKIFAVIILFLIVFLFFVA 336

The following BLAST results are available for this feature:

BLAST of CmaCh05G006430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LK09	2.0e-104	68.04	Syntaxin-32 OS=Arabidopsis thaliana OX=3702 GN=SYP32 PE=2 SV=1	[more]
Q9FFK1	8.1e-66	48.71	Syntaxin-31 OS=Arabidopsis thaliana OX=3702 GN=SYP31 PE=1 SV=1	[more]
Q8K1E0	2.9e-39	39.18	Syntaxin-5 OS=Mus musculus OX=10090 GN=Stx5 PE=1 SV=3	[more]
Q08DB5	6.5e-39	38.86	Syntaxin-5 OS=Bos taurus OX=9913 GN=STX5 PE=2 SV=1	[more]
Q13190	8.5e-39	38.55	Syntaxin-5 OS=Homo sapiens OX=9606 GN=STX5 PE=1 SV=2	[more]

BLAST of CmaCh05G006430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24350.1	1.4e-105	68.04	syntaxin of plants 32	[more]
AT3G24350.2	2.5e-102	65.07	syntaxin of plants 32	[more]
AT5G05760.1	5.8e-67	48.71	syntaxin of plants 31	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 256..323 e-value: 9.8E-16 score: 68.3
IPR000727	Target SNARE coiled-coil homology domain	PFAM	PF05739	SNARE	coord: 297..349 e-value: 2.9E-16 score: 59.2
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 261..323 score: 17.59856
None	No IPR available	GENE3D	1.20.58.70		coord: 63..316 e-value: 1.4E-46 score: 160.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..257
None	No IPR available	PANTHER	PTHR19957:SF293	SYNTAXIN-32-LIKE	coord: 21..352
None	No IPR available	PANTHER	PTHR19957	SYNTAXIN	coord: 21..352
None	No IPR available	CDD	cd15844	SNARE_syntaxin5	coord: 264..342 e-value: 8.47891E-42 score: 139.185
IPR021538	Syntaxin-5, N-terminal, Sly1p-binding domain	PFAM	PF11416	Syntaxin-5_N	coord: 20..39 e-value: 9.5E-4 score: 18.4
IPR006012	Syntaxin/epimorphin, conserved site	PROSITE	PS00914	SYNTAXIN	coord: 267..306
IPR010989	SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 66..316

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G006430.1	CmaCh05G006430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0061025	membrane fusion
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0005484	SNAP receptor activity