CmaCh05G006270 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTTTGGTGTTCGTGTGCGATGAGGATCAGAGGGTGCTGTCCAGGCAACCAGCTCCAGGGGCTTGCCCCTTCTGCGGAGGCATGATCCAGGCCACCGACGTTGAAAGCCAATGGAGGTTCTGCTTCCTCCCCCTTTACTGGAAAACCAAACGCAAGTTCTATTGCACCATGTGCACCAGACAACTCGTTATACAGTAG ATGTGTTTGGTGTTCGTGTGCGATGAGGATCAGAGGGTGCTGTCCAGGCAACCAGCTCCAGGGGCTTGCCCCTTCTGCGGAGGCATGATCCAGGCCACCGACGTTGAAAGCCAATGGAGGTTCTGCTTCCTCCCCCTTTACTGGAAAACCAAACGCAAGTTCTATTGCACCATGTGCACCAGACAACTCGTTATACAGTAG ATGTGTTTGGTGTTCGTGTGCGATGAGGATCAGAGGGTGCTGTCCAGGCAACCAGCTCCAGGGGCTTGCCCCTTCTGCGGAGGCATGATCCAGGCCACCGACGTTGAAAGCCAATGGAGGTTCTGCTTCCTCCCCCTTTACTGGAAAACCAAACGCAAGTTCTATTGCACCATGTGCACCAGACAACTCGTTATACAGTAG MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ Homology
BLAST of CmaCh05G006270 vs. TAIR 10
Match: AT5G10695.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 100.9 bits (250), Expect = 4.0e-22 Identity = 39/65 (60.00%), Postives = 52/65 (80.00%), Query Frame = 0
BLAST of CmaCh05G006270 vs. TAIR 10
Match: AT5G57123.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 94.0 bits (232), Expect = 4.9e-20 Identity = 37/65 (56.92%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of CmaCh05G006270 vs. TAIR 10
Match: AT4G29905.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 73 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 86.7 bits (213), Expect = 7.8e-18 Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of CmaCh05G006270 vs. TAIR 10
Match: AT1G52855.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 59.7 bits (143), Expect = 1.0e-09 Identity = 21/59 (35.59%), Postives = 35/59 (59.32%), Query Frame = 0
BLAST of CmaCh05G006270 vs. TAIR 10
Match: AT5G10695.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages. ) HSP 1 Score: 47.0 bits (110), Expect = 6.9e-06 Identity = 23/65 (35.38%), Postives = 34/65 (52.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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