CmaCh05G005480 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G005480
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor bHLH30-like
Location	Cma_Chr05: 2680552 .. 2681607 (+)
RNA-Seq Expression	CmaCh05G005480
Synteny	CmaCh05G005480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACATAAACTCTTCTTTCAATTCACACTTTCGTATCCAACTCTGCATGTTCCAGTTCTTCCTACTCTCTCTCACAGCCCTTTTCTCATCCGTTTCCATGGCTTCCTTTCTTCCATAAGAATCGATTAATAAATTCTCGATTCGTTGTTTCACCGTTCAGGCGAGACGAACGAATCATTTCCGACCCCGGAGATGCTGCCTTTTCAGAGTCATTACGGATTCCAGAGCAGTTGGTTGAATTATCGCGACGGCGATCATTTTAAACGTTCGATGTCCGCTGCCGGATGCTCGATCGTCGGAAATGCTGCAGATTCGTCCAAGGACGAGAAGAAATCTACGGAAGCGAGTCGAAGTCATAAGGAAGCGGAGAGGAGACGGCGACAGAGAATCAATTCGCATTTATCTACGCTCCGTACGCTTCTCCCTAATACTACTAAGGTAATCGATTAATTCGCGAAATTGTTGTGCATTTTGTATTGTTGATGTTGAATTGACGAAGCGTTGAGGTTTTTGGATATGGCGGATGGAATATTTGAATTAGTTTTGGACTGTTTGTTTGTTTTATTGTAGACGGACAAGGCGTCACTACTGGCGGAAGTGGTGAGTCATGTGAAGGAGTTGAGACGGCGAGCGACGGAGGTTGCGCGCCGCAGTGCAGACCAGTGCGACGGCGAGGGCGAGGGAGAGGGAGGTATAGTGCCGTGGCCGTTCCCTAGCGAGGAAGACGAAGCGACGCTCTGTTACTGCGATAACGAAAACAGGTTAATGAGAGCGACAGTTTGTTGCGATGAGCGGTCCGGTCTGAATCGGGATTTGATTCAAGCGATCCGGTCGGTTCACGCGAGGGTGGTTCGGGCCGAGATGATGACGTTGGGCGGGAGGACGAAGAACGTGGTGGTGTTGGAGTGGAGCGGCGGCGGTGGCGGGAGAGAGGAGGCGTTTTTGGGCCTGAGGCGGGCTTTAAAGGCCGTAGTAGAGAATCAGGCCCAGAATCTATCGGGTCAGAAGCGGGCTAGGGCCTGTTGTCCAATAGAGGACCCGTTTTTCATGTGCTGA

mRNA sequence

TTACATAAACTCTTCTTTCAATTCACACTTTCGTATCCAACTCTGCATGTTCCAGTTCTTCCTACTCTCTCTCACAGCCCTTTTCTCATCCGTTTCCATGGCTTCCTTTCTTCCATAAGAATCGATTAATAAATTCTCGATTCGTTGTTTCACCGTTCAGGCGAGACGAACGAATCATTTCCGACCCCGGAGATGCTGCCTTTTCAGAGTCATTACGGATTCCAGAGCAGTTGGTTGAATTATCGCGACGGCGATCATTTTAAACGTTCGATGTCCGCTGCCGGATGCTCGATCGTCGGAAATGCTGCAGATTCGTCCAAGGACGAGAAGAAATCTACGGAAGCGAGTCGAAGTCATAAGGAAGCGGAGAGGAGACGGCGACAGAGAATCAATTCGCATTTATCTACGCTCCGTACGCTTCTCCCTAATACTACTAAGACGGACAAGGCGTCACTACTGGCGGAAGTGGTGAGTCATGTGAAGGAGTTGAGACGGCGAGCGACGGAGGTTGCGCGCCGCAGTGCAGACCAGTGCGACGGCGAGGGCGAGGGAGAGGGAGGTATAGTGCCGTGGCCGTTCCCTAGCGAGGAAGACGAAGCGACGCTCTGTTACTGCGATAACGAAAACAGGTTAATGAGAGCGACAGTTTGTTGCGATGAGCGGTCCGGTCTGAATCGGGATTTGATTCAAGCGATCCGGTCGGTTCACGCGAGGGTGGTTCGGGCCGAGATGATGACGTTGGGCGGGAGGACGAAGAACGTGGTGGTGTTGGAGTGGAGCGGCGGCGGTGGCGGGAGAGAGGAGGCGTTTTTGGGCCTGAGGCGGGCTTTAAAGGCCGTAGTAGAGAATCAGGCCCAGAATCTATCGGGTCAGAAGCGGGCTAGGGCCTGTTGTCCAATAGAGGACCCGTTTTTCATGTGCTGA

Coding sequence (CDS)

ATGCTGCCTTTTCAGAGTCATTACGGATTCCAGAGCAGTTGGTTGAATTATCGCGACGGCGATCATTTTAAACGTTCGATGTCCGCTGCCGGATGCTCGATCGTCGGAAATGCTGCAGATTCGTCCAAGGACGAGAAGAAATCTACGGAAGCGAGTCGAAGTCATAAGGAAGCGGAGAGGAGACGGCGACAGAGAATCAATTCGCATTTATCTACGCTCCGTACGCTTCTCCCTAATACTACTAAGACGGACAAGGCGTCACTACTGGCGGAAGTGGTGAGTCATGTGAAGGAGTTGAGACGGCGAGCGACGGAGGTTGCGCGCCGCAGTGCAGACCAGTGCGACGGCGAGGGCGAGGGAGAGGGAGGTATAGTGCCGTGGCCGTTCCCTAGCGAGGAAGACGAAGCGACGCTCTGTTACTGCGATAACGAAAACAGGTTAATGAGAGCGACAGTTTGTTGCGATGAGCGGTCCGGTCTGAATCGGGATTTGATTCAAGCGATCCGGTCGGTTCACGCGAGGGTGGTTCGGGCCGAGATGATGACGTTGGGCGGGAGGACGAAGAACGTGGTGGTGTTGGAGTGGAGCGGCGGCGGTGGCGGGAGAGAGGAGGCGTTTTTGGGCCTGAGGCGGGCTTTAAAGGCCGTAGTAGAGAATCAGGCCCAGAATCTATCGGGTCAGAAGCGGGCTAGGGCCTGTTGTCCAATAGAGGACCCGTTTTTCATGTGCTGA

Protein sequence

MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAERRRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELRRRATEVARRSADQCDGEGEGEGGIVPWPFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGGGREEAFLGLRRALKAVVENQAQNLSGQKRARACCPIEDPFFMC

Homology

[Close]

BLAST of CmaCh05G005480 vs. ExPASy Swiss-Prot
Match: Q9S7Y1 (Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.7e-28
Identity = 76/182 (41.76%), Postives = 117/182 (64.29%), Query Frame = 0


Query: 45  EKKSTEASRSHKEAERRRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELRRRAT 104
           + K+  AS+SH EAERRRR+RIN+HL+ LR++LPNTTKTDKASLLAEV+ HVKEL+R  +
Sbjct: 168 DAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETS 227

Query: 105 EVARRSADQCDGEGEGEGGIVPWPFPSEEDEATLCYCDNENR-----LMRATVCCDERSG 164
            ++  +                   P+E DE T+ + + E       +++A++CC++RS 
Sbjct: 228 VISETNL-----------------VPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSD 287

Query: 165 LNRDLIQAIRSVHARVVRAEMMTLGGRTKNVVVL--EWSGGGGGREEAFLG-LRRALKAV 219
           L  D+I+ ++++  + ++AE+ T+GGR KNV+ +  E S G    EE  +G +  ALKAV
Sbjct: 288 LLPDMIKTLKAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAV 332

[Close]

BLAST of CmaCh05G005480 vs. ExPASy Swiss-Prot
Match: Q9LS08 (Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.5e-26
Identity = 70/163 (42.94%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 34  IVGNAADSSKDEKKSTEASRSHKEAERRRRQRINSHLSTLRTLLPNTTKTDKASLLAEVV 93
           I+G  +     + K+  AS+SH EAERRRR+RIN+HL+ LR++LPNTTKTDKASLLAEV+
Sbjct: 115 IMGKLSAQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVI 174

Query: 94  SHVKELRRRATEVARRSADQCDGEGEGEGGIVPWPFPSEEDEATL--CYCDNE-NRLMRA 153
            H+KEL+R+ +++                    +  P+E D+ T+   Y D E N ++RA
Sbjct: 175 QHMKELKRQTSQITD-----------------TYQVPTECDDLTVDSSYNDEEGNLVIRA 234

Query: 154 TVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLGGRTKNVVVL 194
           + CC +R+ L  D+I A++S+  R ++AE+ T+GGR KN++ L
Sbjct: 235 SFCCQDRTDLMHDVINALKSLRLRTLKAEIATVGGRVKNILFL 260

[Close]

BLAST of CmaCh05G005480 vs. ExPASy Swiss-Prot
Match: O80674 (Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.6e-23
Identity = 70/184 (38.04%), Postives = 118/184 (64.13%), Query Frame = 0


Query: 45  EKKSTEASRSHKEAERRRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELRRRAT 104
           + ++  A R+HKEAERRRR+RINSHL+ LR +L   +KTDKA+LLA+VV  V+EL+++  
Sbjct: 61  QDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTL 120

Query: 105 EVARRSADQCDGEGEGEGGIVPWPFPSEEDEATLC----YCDNENRLMRATVCCDERSGL 164
           E +   +DQ                PSE DE ++     Y ++ + + +A++CC++RS L
Sbjct: 121 ETS--DSDQT-------------LLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDL 180

Query: 165 NRDLIQAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGGGREEAFLGLRRALKAVVENQ 224
             DL++ ++S++ + +RAEM+T+GGRT++V+V+       G E     L+ ALK+++E  
Sbjct: 181 LPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHF-LQNALKSLLERS 228

[Close]

BLAST of CmaCh05G005480 vs. ExPASy Swiss-Prot
Match: P0CB25 (Transcription factor bHLH131 OS=Arabidopsis thaliana OX=3702 GN=BHLH131 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-21
Identity = 66/182 (36.26%), Postives = 100/182 (54.95%), Query Frame = 0


Query: 42  SKDEKKSTEASRSHKEAERRRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELRR 101
           SK E K   A++ H +AERRRR RINS  +TLRT+LPN  K DKAS+L E V +  EL++
Sbjct: 84  SKTESKEV-AAKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKK 143

Query: 102 RATEVARRSADQCDGEGEGEGGIVPWPFPSEEDEATLCYCDNENRLMRATVCCDERSGLN 161
              ++                       PS ED   L +C+N   L R    C +R GL 
Sbjct: 144 MVQDIPTT--------------------PSLEDNLRLDHCNNNRDLARVVFSCSDREGLM 203

Query: 162 RDLIQAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGGGREEAFLGLRRALKAVVENQA 221
            ++ +++++V A+ VRAE+MT+GGRTK  + ++   G     E  + L+++LK VV  ++
Sbjct: 204 SEVAESMKAVKAKAVRAEIMTVGGRTKCALFVQGVNG----NEGLVKLKKSLKLVVNGKS 240

Query: 222 QN 224
            +
Sbjct: 264 SS 240

[Close]

BLAST of CmaCh05G005480 vs. ExPASy Swiss-Prot
Match: Q9LET0 (Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.0e-19
Identity = 64/186 (34.41%), Postives = 109/186 (58.60%), Query Frame = 0


Query: 45  EKKSTEASRSHKEAERRRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELRRRAT 104
           E K+  + R+HKEAER+RR RINSHL+ LR LL   +KTDK++LLA+VV  VKEL+++  
Sbjct: 39  EDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTL 98

Query: 105 EVARRSADQCDGEGEGEGGIVPWPFPSEEDEATLCYCDNENR------LMRATVCCDERS 164
           E+   +                   PSE DE ++   ++ +R      + + + CC++R 
Sbjct: 99  EITDET------------------IPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRP 158

Query: 165 GLNRDLIQAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGGGREEAFLGLRRALKAVVE 224
            L +DL++ ++S+    + A+M T+GGRT+NV+V+       G +     L+ ALK+++E
Sbjct: 159 ELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNF-LQNALKSLLE 205

[Close]

BLAST of CmaCh05G005480 vs. TAIR 10
Match: AT1G68810.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-29
Identity = 76/182 (41.76%), Postives = 117/182 (64.29%), Query Frame = 0


Query: 45  EKKSTEASRSHKEAERRRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELRRRAT 104
           + K+  AS+SH EAERRRR+RIN+HL+ LR++LPNTTKTDKASLLAEV+ HVKEL+R  +
Sbjct: 168 DAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETS 227

Query: 105 EVARRSADQCDGEGEGEGGIVPWPFPSEEDEATLCYCDNENR-----LMRATVCCDERSG 164
            ++  +                   P+E DE T+ + + E       +++A++CC++RS 
Sbjct: 228 VISETNL-----------------VPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSD 287

Query: 165 LNRDLIQAIRSVHARVVRAEMMTLGGRTKNVVVL--EWSGGGGGREEAFLG-LRRALKAV 219
           L  D+I+ ++++  + ++AE+ T+GGR KNV+ +  E S G    EE  +G +  ALKAV
Sbjct: 288 LLPDMIKTLKAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAV 332

[Close]

BLAST of CmaCh05G005480 vs. TAIR 10
Match: AT3G25710.1 (basic helix-loop-helix 32 )

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-27
Identity = 70/163 (42.94%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 34  IVGNAADSSKDEKKSTEASRSHKEAERRRRQRINSHLSTLRTLLPNTTKTDKASLLAEVV 93
           I+G  +     + K+  AS+SH EAERRRR+RIN+HL+ LR++LPNTTKTDKASLLAEV+
Sbjct: 115 IMGKLSAQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVI 174

Query: 94  SHVKELRRRATEVARRSADQCDGEGEGEGGIVPWPFPSEEDEATL--CYCDNE-NRLMRA 153
            H+KEL+R+ +++                    +  P+E D+ T+   Y D E N ++RA
Sbjct: 175 QHMKELKRQTSQITD-----------------TYQVPTECDDLTVDSSYNDEEGNLVIRA 234

Query: 154 TVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLGGRTKNVVVL 194
           + CC +R+ L  D+I A++S+  R ++AE+ T+GGR KN++ L
Sbjct: 235 SFCCQDRTDLMHDVINALKSLRLRTLKAEIATVGGRVKNILFL 260

[Close]

BLAST of CmaCh05G005480 vs. TAIR 10
Match: AT2G41130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.9e-24
Identity = 70/184 (38.04%), Postives = 118/184 (64.13%), Query Frame = 0


Query: 45  EKKSTEASRSHKEAERRRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELRRRAT 104
           + ++  A R+HKEAERRRR+RINSHL+ LR +L   +KTDKA+LLA+VV  V+EL+++  
Sbjct: 61  QDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTL 120

Query: 105 EVARRSADQCDGEGEGEGGIVPWPFPSEEDEATLC----YCDNENRLMRATVCCDERSGL 164
           E +   +DQ                PSE DE ++     Y ++ + + +A++CC++RS L
Sbjct: 121 ETS--DSDQT-------------LLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDL 180

Query: 165 NRDLIQAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGGGREEAFLGLRRALKAVVENQ 224
             DL++ ++S++ + +RAEM+T+GGRT++V+V+       G E     L+ ALK+++E  
Sbjct: 181 LPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHF-LQNALKSLLERS 228

[Close]

BLAST of CmaCh05G005480 vs. TAIR 10
Match: AT4G38070.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-22
Identity = 66/182 (36.26%), Postives = 100/182 (54.95%), Query Frame = 0


Query: 42   SKDEKKSTEASRSHKEAERRRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELRR 101
            SK E K   A++ H +AERRRR RINS  +TLRT+LPN  K DKAS+L E V +  EL++
Sbjct: 1341 SKTESKEV-AAKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKK 1400

Query: 102  RATEVARRSADQCDGEGEGEGGIVPWPFPSEEDEATLCYCDNENRLMRATVCCDERSGLN 161
               ++                       PS ED   L +C+N   L R    C +R GL 
Sbjct: 1401 MVQDIPTT--------------------PSLEDNLRLDHCNNNRDLARVVFSCSDREGLM 1460

Query: 162  RDLIQAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGGGREEAFLGLRRALKAVVENQA 221
             ++ +++++V A+ VRAE+MT+GGRTK  + ++   G     E  + L+++LK VV  ++
Sbjct: 1461 SEVAESMKAVKAKAVRAEIMTVGGRTKCALFVQGVNG----NEGLVKLKKSLKLVVNGKS 1497

Query: 222  QN 224
             +
Sbjct: 1521 SS 1497

[Close]

BLAST of CmaCh05G005480 vs. TAIR 10
Match: AT3G56770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 7.3e-21
Identity = 64/186 (34.41%), Postives = 109/186 (58.60%), Query Frame = 0


Query: 45  EKKSTEASRSHKEAERRRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELRRRAT 104
           E K+  + R+HKEAER+RR RINSHL+ LR LL   +KTDK++LLA+VV  VKEL+++  
Sbjct: 39  EDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTL 98

Query: 105 EVARRSADQCDGEGEGEGGIVPWPFPSEEDEATLCYCDNENR------LMRATVCCDERS 164
           E+   +                   PSE DE ++   ++ +R      + + + CC++R 
Sbjct: 99  EITDET------------------IPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRP 158

Query: 165 GLNRDLIQAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGGGREEAFLGLRRALKAVVE 224
            L +DL++ ++S+    + A+M T+GGRT+NV+V+       G +     L+ ALK+++E
Sbjct: 159 ELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNF-LQNALKSLLE 205

The following BLAST results are available for this feature:

BLAST of CmaCh05G005480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7Y1	2.7e-28	41.76	Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1	[more]
Q9LS08	2.5e-26	42.94	Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1	[more]
O80674	2.6e-23	38.04	Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=...	[more]
P0CB25	2.5e-21	36.26	Transcription factor bHLH131 OS=Arabidopsis thaliana OX=3702 GN=BHLH131 PE=2 SV=...	[more]
Q9LET0	1.0e-19	34.41	Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107...	[more]

BLAST of CmaCh05G005480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68810.1	1.9e-29	41.76	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G25710.1	1.8e-27	42.94	basic helix-loop-helix 32	[more]
AT2G41130.1	1.9e-24	38.04	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G38070.1	1.7e-22	36.26	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G56770.1	7.3e-21	34.41	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 56..105 e-value: 6.1E-13 score: 59.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 53..99 e-value: 5.1E-13 score: 48.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 50..99 score: 16.919992
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 39..100 e-value: 3.0E-15 score: 57.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 53..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..65
None	No IPR available	PANTHER	PTHR45844:SF16	OS09G0463900 PROTEIN	coord: 37..233
None	No IPR available	PANTHER	PTHR45844	TRANSCRIPTION FACTOR BHLH30	coord: 37..233
None	No IPR available	CDD	cd11455	bHLH_AtAIG1_like	coord: 45..107 e-value: 5.46031E-32 score: 110.461

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G005480.1	CmaCh05G005480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity