CmaCh05G004360 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G004360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ankyrin repeat protein SKIP35-like
Location	Cma_Chr05: 1978740 .. 1982659 (-)
RNA-Seq Expression	CmaCh05G004360
Synteny	CmaCh05G004360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAAGAAATAAAAGAAAAAGGGAAAATAGCGATAAATTTACACGGAGCGGAGATCAGGGTTTCTTCTTCCTTCTCCCGTTTCTCCATGCTTCTCTCTCCACCTTTAATCTCAGGTTTGCCTCCGATTCATCCTTCTTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATTGGATTGGATTCGATTTTTTTTTCTCTTTTTCTTTTTTTCTTTTGGTGCCCTTGATTTTAGTTTTCTACTTCCCTCGGCTTTAAGGTATTTGTTTGATCGTTTCTCCTTTTCTTCCTTTCTTCACATCTATGTGTTCTTGTTCCTGATTTTTGTGTTGTTTTCTGAATTAGGTTTGTTTTGTGGTGGTGGTTTTAGATTGATTATTGTTATGGAGCTCGTATATGGGAGGTTTTTTGGCTGATTGATTTATGTAAATTCTGGTTTCTTGTTTCTATTTTTTTATTATTGTTTACTGGGACGGTATGCTGGCGATTTCCTTTTTTGTTTGATTGTTTTGGAGTTCAGTTTATTTGATGTTTTATTTCGACTTTGGATTTAACATTCCGATTTCTTTGGTGTTTGTTCTTTTATTTTTGCAGTTCTTTTTTAGAGGGCACCGTGATTTAGTAGTTTGCTGAAGAGATTGTAGATGTTGGGGTTTTGATGACGGGAAAGTAATCTTGTTTGATTCGGGGTGCTTGTGTGCTCTTTGGAAGGAGGGGTGCGGCGCAGAATTGAATCAAGTGGGCCGATGGAAAAAGAGGTTTTGGTTCCGATTAGGGAAAATGTGGCTGATGAAGCTTTAATGTTCGATCACATAAATATGGAAACCAAAACTGAGGAGGATGGAATTGATATTCCAAAGAGCGATGTTTATGCTCCTGCATCAGAGAAAGGCGAGGGAAGTAGTGTTGTATTCTCTAGAGAAGGACCTCTTGTGAAGAAAGAGTCGGTTCTAGCCTTTGGTTGTAATTCCAATGAACAGAGTCCCAAATCCATGCTTGTTGTGACAGATTATAAGCAGGGAAAGAAGGGGAAGTCCGGTCATGAAAAGAAACTTAGCAGACAAGACAGATTCGAGTTGGGCCGGTTGTTTCAGGGTGCTGTAAGCTCACATGATTGGGAACTTGCAGACAGTTTGATCGCGTTGGCAGATCATCAGACGCTTAATGATGCTTTGTGCATCACCTTGGATTCAATCTGGTTTTTGAGCACCCAGCAAGAGCTTAATGGAATAACTGGGTTAATTAAGAACATCATTGTGAGTGGAGCGTATGATTTTACAAGAGCAGCTCTAAGGACCTCATTTCTGGCTTCGTGTGTCTCTGCCTGCCAGAGTCGAACAATGAGTCTTGCGGATACCGTAACTGTAATGGCACAAAGGTGAAGATAAGCTCTTATTACTACATGAGTTGTTTTAATCACAATCAAAACAAATGGGCCCCTTAATGTTTCATTGTGTTTCATGTTGAATCTTAAACACTAACTATTTAAGTTCTGTTCTCATTATGCTCTACTTCCAACGAGTTGTGAGAAGTTAGAAAATATTGATATCTTTCGTTTGGTTTCCTTGAATTAGCTTACTTATAACTATATATGTGGAAATAACTAAACTATGCAAGTCTCGGCTCTGTTATGATGGGGGTGCTCTTAATGTTTTTGGCATGACAAGATACATTTTCTTCTTTGTAGTCTAGTACAAATTGTATAATTTCCATCATTTTTATCTTCCTCAATACTAGTTTTTCATTCACTTTCTTAACTCCTGCTGGTGAGTTCGATCTCAACTGTCCTTTAATCAAAATGTCTATAATGTGGGGCAACGAGCTAATAAGTTTTTACCTGGCACATTGGACACGTTCTTACGTTTGACATTTCATTAATTGCAGGTTGCGTGAGCGTCTCCAAGAATGCAATGGAGATGAGGTCTTAAAAGCAGAGGCTGGTACAAAGGTTCAAAAGTTTACCGAGTGGGCTCTGAAATGCATAGGTTTTCATTCTGGGTGCCAAGGAAATAAGGACCGAGTGACTCAGAGCTCGGCTGCCGAGATCCAACTTCAGTTATCTGCTTTCAAAATGTTCCTAGATTTTGCTGGCAATCAACTTACTGGAAAAGATTTCACGGAGGCCTTCGACGCTGCTTGTTTCCCACTCACTCTCTTTTCTAGTTCATTTGATCCTGGATGGGCAACTGGAATATCAGCAACCGCAATCCAAGGCTTATTGTGTTTGCTGGTGGAGGGTGGCGCTGACAATGTTAACCAGTGCTTCCTTGAAGCTTCTCGTTTTGGAAGCACAGAACTCGTGCGCATTTTATTACAGGTACAGTAAATGATGTTCATATCAGCTACTTATTTCTTGAGAAATATCTGATTTGGTGGAGTTGATAGTGAGCATAATGAAATTACTTTCAAGTCTTTCTTCATACAATTGTTTCACTCGATTGATATTCTTCATGTACTTTTTGCAGCCTTAGTTTTTTACATTAATATTAAGTTTTATCTAAAGTTGGTCTATATTTTTCTACTGCAAATTTGGTGATTGATACAAACAAATTTTTTGAGTTATCTGTAAGAACGTCTGAGAATCTCTCGTACGTCATCTCTTTCGGTTTCACCTTTACATGAATTGGAATGTGTAAAGGGGGTTTACACTCATCTCTTCCTGTTTTTTATGATTTGTCGAATGTGTCTGTAGATTGCTCAAAGGAACAGCTTGGACGTTGATGTTGACCTGGCTTTGGGCTTTGCTTCTCACTACTGTAAGATCGGTACAATGGAGTGCTTGGTGGAAGAGGGTAACGCCATAGCTTTTTTGGGTCCTTTGATGAGAGCAGCTGAAAGGGGATGTTTACCGGTTGTCGAGTGGTTTGTGAAAAGAGGTTGTCAGGACATGGAACTCTGCCTCGCCCTAACAGCAGCCACATCTAGCAGCCAAATTAACGTCGCTGCGTATCTTCTTCCCCACGTACCTCAACACGTGCTCGCTGCCCTCAGCATTGAAATTCTAAAGGCTGCTGGGGAACGGAGTAGTGGTTCTCTTGATGGTGTGGAGTTTCTCCTGCATTCCAACTTTCTTGGCGATCCTTCTGCAACATATGCTGTTGCAGACAGTATCTCGAAGTCGAGTGACGAGTCTGTTGCTCCGGAGCTTAGGGAGTTTCTTCGGGAGCATTGGTCGGAGGCGGCTTACTTGGACGGGTTGAGACAAGGTCAAGAAAATTACTTGAACTTTGTGCGGATTTTGAGGTGGGGTGGATCTCCAATTTCGTTGAGGGATATTCCACCACCCTTGAGAGTTGCAATAGCTTACCTACCGCTGTATAGGGAATGTGTAAAAGTGGATGGATACTTGTTTTCGCAAAAGCTGAGGGGGCAGCTGGTCGAAGCTGCTACGAGGCTTGGTGGTGGTGGTGGTGTGTTAGAAGAGGTAAGCAAAGGTAGGGAGCTCATGGCTGTTTTGGAGCATTATCTTCCTCCATTTTTGCTTCACAAGTTAAATGCTACTTAGCAAGACTTTTCGTATTGCATCTTTCATCGCCCTCCCGTTTAAATGATAAATAAAAAAAGGAAACGAGAACGAAACAATGAACGAGATAGAGAATGAGAAAGATAGCACTGTGAAATGTGTGGTCGATATTCATTTTAACGGGATAGCACGAAGCACTTGCGGTTTGCCTATTTTTCTTTCTAGCCTTCGTGGTTGACTACCTGGCTACTTTCGAGATAGGTGCACTATTTCGAATGGATGGTTCGTCATATCTTATGTTGACTCATGCACATGATGCTATGTAATGTAAGACATGGCGCAACCGTTATTAGAAGGTTCAATCCGAACGATGTGTACATTATTGGTATATATCATCTTTTGTTCTCTGCTTATGTGGATTAATGATACAGAGGAAG

mRNA sequence

AGGAAAGAAATAAAAGAAAAAGGGAAAATAGCGATAAATTTACACGGAGCGGAGATCAGGGTTTCTTCTTCCTTCTCCCGTTTCTCCATGCTTCTCTCTCCACCTTTAATCTCAGTTCTTTTTTAGAGGGCACCGTGATTTAGTAGTTTGCTGAAGAGATTGTAGATGTTGGGGTTTTGATGACGGGAAAGTAATCTTGTTTGATTCGGGGTGCTTGTGTGCTCTTTGGAAGGAGGGGTGCGGCGCAGAATTGAATCAAGTGGGCCGATGGAAAAAGAGGTTTTGGTTCCGATTAGGGAAAATGTGGCTGATGAAGCTTTAATGTTCGATCACATAAATATGGAAACCAAAACTGAGGAGGATGGAATTGATATTCCAAAGAGCGATGTTTATGCTCCTGCATCAGAGAAAGGCGAGGGAAGTAGTGTTGTATTCTCTAGAGAAGGACCTCTTGTGAAGAAAGAGTCGGTTCTAGCCTTTGGTTGTAATTCCAATGAACAGAGTCCCAAATCCATGCTTGTTGTGACAGATTATAAGCAGGGAAAGAAGGGGAAGTCCGGTCATGAAAAGAAACTTAGCAGACAAGACAGATTCGAGTTGGGCCGGTTGTTTCAGGGTGCTGTAAGCTCACATGATTGGGAACTTGCAGACAGTTTGATCGCGTTGGCAGATCATCAGACGCTTAATGATGCTTTGTGCATCACCTTGGATTCAATCTGGTTTTTGAGCACCCAGCAAGAGCTTAATGGAATAACTGGGTTAATTAAGAACATCATTGTGAGTGGAGCGTATGATTTTACAAGAGCAGCTCTAAGGACCTCATTTCTGGCTTCGTGTGTCTCTGCCTGCCAGAGTCGAACAATGAGTCTTGCGGATACCGTAACTGTAATGGCACAAAGGTTGCGTGAGCGTCTCCAAGAATGCAATGGAGATGAGGTCTTAAAAGCAGAGGCTGGTACAAAGGTTCAAAAGTTTACCGAGTGGGCTCTGAAATGCATAGGTTTTCATTCTGGGTGCCAAGGAAATAAGGACCGAGTGACTCAGAGCTCGGCTGCCGAGATCCAACTTCAGTTATCTGCTTTCAAAATGTTCCTAGATTTTGCTGGCAATCAACTTACTGGAAAAGATTTCACGGAGGCCTTCGACGCTGCTTGTTTCCCACTCACTCTCTTTTCTAGTTCATTTGATCCTGGATGGGCAACTGGAATATCAGCAACCGCAATCCAAGGCTTATTGTGTTTGCTGGTGGAGGGTGGCGCTGACAATGTTAACCAGTGCTTCCTTGAAGCTTCTCGTTTTGGAAGCACAGAACTCGTGCGCATTTTATTACAGATTGCTCAAAGGAACAGCTTGGACGTTGATGTTGACCTGGCTTTGGGCTTTGCTTCTCACTACTGTAAGATCGGTACAATGGAGTGCTTGGTGGAAGAGGGTAACGCCATAGCTTTTTTGGGTCCTTTGATGAGAGCAGCTGAAAGGGGATGTTTACCGGTTGTCGAGTGGTTTGTGAAAAGAGGTTGTCAGGACATGGAACTCTGCCTCGCCCTAACAGCAGCCACATCTAGCAGCCAAATTAACGTCGCTGCGTATCTTCTTCCCCACGTACCTCAACACGTGCTCGCTGCCCTCAGCATTGAAATTCTAAAGGCTGCTGGGGAACGGAGTAGTGGTTCTCTTGATGGTGTGGAGTTTCTCCTGCATTCCAACTTTCTTGGCGATCCTTCTGCAACATATGCTGTTGCAGACAGTATCTCGAAGTCGAGTGACGAGTCTGTTGCTCCGGAGCTTAGGGAGTTTCTTCGGGAGCATTGGTCGGAGGCGGCTTACTTGGACGGGTTGAGACAAGGTCAAGAAAATTACTTGAACTTTGTGCGGATTTTGAGGTGGGGTGGATCTCCAATTTCGTTGAGGGATATTCCACCACCCTTGAGAGTTGCAATAGCTTACCTACCGCTGTATAGGGAATGTGTAAAAGTGGATGGATACTTGTTTTCGCAAAAGCTGAGGGGGCAGCTGGTCGAAGCTGCTACGAGGCTTGGTGGTGGTGGTGGTGTGTTAGAAGAGGTAAGCAAAGGTAGGGAGCTCATGGCTGTTTTGGAGCATTATCTTCCTCCATTTTTGCTTCACAAGTTAAATGCTACTTAGCAAGACTTTTCGTATTGCATCTTTCATCGCCCTCCCGTTTAAATGATAAATAAAAAAAGGAAACGAGAACGAAACAATGAACGAGATAGAGAATGAGAAAGATAGCACTGTGAAATGTGTGGTCGATATTCATTTTAACGGGATAGCACGAAGCACTTGCGGTTTGCCTATTTTTCTTTCTAGCCTTCGTGGTTGACTACCTGGCTACTTTCGAGATAGGTGCACTATTTCGAATGGATGGTTCGTCATATCTTATGTTGACTCATGCACATGATGCTATGTAATGTAAGACATGGCGCAACCGTTATTAGAAGGTTCAATCCGAACGATGTGTACATTATTGGTATATATCATCTTTTGTTCTCTGCTTATGTGGATTAATGATACAGAGGAAG

Coding sequence (CDS)

ATGGAAAAAGAGGTTTTGGTTCCGATTAGGGAAAATGTGGCTGATGAAGCTTTAATGTTCGATCACATAAATATGGAAACCAAAACTGAGGAGGATGGAATTGATATTCCAAAGAGCGATGTTTATGCTCCTGCATCAGAGAAAGGCGAGGGAAGTAGTGTTGTATTCTCTAGAGAAGGACCTCTTGTGAAGAAAGAGTCGGTTCTAGCCTTTGGTTGTAATTCCAATGAACAGAGTCCCAAATCCATGCTTGTTGTGACAGATTATAAGCAGGGAAAGAAGGGGAAGTCCGGTCATGAAAAGAAACTTAGCAGACAAGACAGATTCGAGTTGGGCCGGTTGTTTCAGGGTGCTGTAAGCTCACATGATTGGGAACTTGCAGACAGTTTGATCGCGTTGGCAGATCATCAGACGCTTAATGATGCTTTGTGCATCACCTTGGATTCAATCTGGTTTTTGAGCACCCAGCAAGAGCTTAATGGAATAACTGGGTTAATTAAGAACATCATTGTGAGTGGAGCGTATGATTTTACAAGAGCAGCTCTAAGGACCTCATTTCTGGCTTCGTGTGTCTCTGCCTGCCAGAGTCGAACAATGAGTCTTGCGGATACCGTAACTGTAATGGCACAAAGGTTGCGTGAGCGTCTCCAAGAATGCAATGGAGATGAGGTCTTAAAAGCAGAGGCTGGTACAAAGGTTCAAAAGTTTACCGAGTGGGCTCTGAAATGCATAGGTTTTCATTCTGGGTGCCAAGGAAATAAGGACCGAGTGACTCAGAGCTCGGCTGCCGAGATCCAACTTCAGTTATCTGCTTTCAAAATGTTCCTAGATTTTGCTGGCAATCAACTTACTGGAAAAGATTTCACGGAGGCCTTCGACGCTGCTTGTTTCCCACTCACTCTCTTTTCTAGTTCATTTGATCCTGGATGGGCAACTGGAATATCAGCAACCGCAATCCAAGGCTTATTGTGTTTGCTGGTGGAGGGTGGCGCTGACAATGTTAACCAGTGCTTCCTTGAAGCTTCTCGTTTTGGAAGCACAGAACTCGTGCGCATTTTATTACAGATTGCTCAAAGGAACAGCTTGGACGTTGATGTTGACCTGGCTTTGGGCTTTGCTTCTCACTACTGTAAGATCGGTACAATGGAGTGCTTGGTGGAAGAGGGTAACGCCATAGCTTTTTTGGGTCCTTTGATGAGAGCAGCTGAAAGGGGATGTTTACCGGTTGTCGAGTGGTTTGTGAAAAGAGGTTGTCAGGACATGGAACTCTGCCTCGCCCTAACAGCAGCCACATCTAGCAGCCAAATTAACGTCGCTGCGTATCTTCTTCCCCACGTACCTCAACACGTGCTCGCTGCCCTCAGCATTGAAATTCTAAAGGCTGCTGGGGAACGGAGTAGTGGTTCTCTTGATGGTGTGGAGTTTCTCCTGCATTCCAACTTTCTTGGCGATCCTTCTGCAACATATGCTGTTGCAGACAGTATCTCGAAGTCGAGTGACGAGTCTGTTGCTCCGGAGCTTAGGGAGTTTCTTCGGGAGCATTGGTCGGAGGCGGCTTACTTGGACGGGTTGAGACAAGGTCAAGAAAATTACTTGAACTTTGTGCGGATTTTGAGGTGGGGTGGATCTCCAATTTCGTTGAGGGATATTCCACCACCCTTGAGAGTTGCAATAGCTTACCTACCGCTGTATAGGGAATGTGTAAAAGTGGATGGATACTTGTTTTCGCAAAAGCTGAGGGGGCAGCTGGTCGAAGCTGCTACGAGGCTTGGTGGTGGTGGTGGTGTGTTAGAAGAGGTAAGCAAAGGTAGGGAGCTCATGGCTGTTTTGGAGCATTATCTTCCTCCATTTTTGCTTCACAAGTTAAATGCTACTTAG

Protein sequence

MEKEVLVPIRENVADEALMFDHINMETKTEEDGIDIPKSDVYAPASEKGEGSSVVFSREGPLVKKESVLAFGCNSNEQSPKSMLVVTDYKQGKKGKSGHEKKLSRQDRFELGRLFQGAVSSHDWELADSLIALADHQTLNDALCITLDSIWFLSTQQELNGITGLIKNIIVSGAYDFTRAALRTSFLASCVSACQSRTMSLADTVTVMAQRLRERLQECNGDEVLKAEAGTKVQKFTEWALKCIGFHSGCQGNKDRVTQSSAAEIQLQLSAFKMFLDFAGNQLTGKDFTEAFDAACFPLTLFSSSFDPGWATGISATAIQGLLCLLVEGGADNVNQCFLEASRFGSTELVRILLQIAQRNSLDVDVDLALGFASHYCKIGTMECLVEEGNAIAFLGPLMRAAERGCLPVVEWFVKRGCQDMELCLALTAATSSSQINVAAYLLPHVPQHVLAALSIEILKAAGERSSGSLDGVEFLLHSNFLGDPSATYAVADSISKSSDESVAPELREFLREHWSEAAYLDGLRQGQENYLNFVRILRWGGSPISLRDIPPPLRVAIAYLPLYRECVKVDGYLFSQKLRGQLVEAATRLGGGGGVLEEVSKGRELMAVLEHYLPPFLLHKLNAT

Homology

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BLAST of CmaCh05G004360 vs. ExPASy Swiss-Prot
Match: Q9M1Y3 (Ankyrin repeat protein SKIP35 OS=Arabidopsis thaliana OX=3702 GN=SKIP35 PE=1 SV=1)

HSP 1 Score: 827.0 bits (2135), Expect = 1.4e-238
Identity = 436/607 (71.83%), Postives = 498/607 (82.04%), Query Frame = 0


Query: 12  NVADEALMFDHINMETKTEEDGIDIPKSDVYAPASEKGEGSSVVFSREGPLVKKESVLAF 71
           N++D+    +    E KTE     I  S  +    E GEGS VVFSRE PL+ K+S    
Sbjct: 11  NLSDQMYPDEPFCSEMKTE----TIASSQKF----EGGEGSKVVFSREAPLIGKDSA--- 70

Query: 72  GCNSNE---QSPKSMLVVTDYKQGKKGKSGHEKKLSRQDRFELGRLFQGAVSSHDWELAD 131
           G NS E    S K +    D    +K     +KKL+RQ+R ELGRLFQGAV+S DWELA+
Sbjct: 71  GTNSGECCGCSAKKLNFKGDDDLVEKENIEQQKKLNRQERIELGRLFQGAVTSLDWELAE 130

Query: 132 SLIALADHQTLNDALCITLDSIWFLSTQQELNGITGLIKNIIVSGAYDFTRAALRTSFLA 191
            LI LAD QTLND LC+ LDS+WFLST+ E  GITGLIK II  GA+DFTRA LRTSFLA
Sbjct: 131 RLIQLADPQTLNDLLCVGLDSVWFLSTKPEFQGITGLIKKIICHGAHDFTRATLRTSFLA 190

Query: 192 SCVSACQSRTMSLADTVTVMAQRLRERLQECNGDEVLKAEAGTKVQKFTEWALKCIGFHS 251
           SCVSACQSRTMSL+DTVTVMAQRL ERLQECNGDE+LKAEAG KVQKFTEWALKCIGFHS
Sbjct: 191 SCVSACQSRTMSLSDTVTVMAQRLHERLQECNGDEILKAEAGAKVQKFTEWALKCIGFHS 250

Query: 252 GCQGNKDRVTQSSAAEIQLQLSAFKMFLDFAGNQLTGKDFTEAFDAACFPLTLFSSSFDP 311
            CQG KDRV+Q+SAAEI+LQLSAFKMFLD AGN L+G+DFTEAFDAACFPLTLFS+SFDP
Sbjct: 251 RCQGAKDRVSQNSAAEIELQLSAFKMFLDLAGNHLSGRDFTEAFDAACFPLTLFSNSFDP 310

Query: 312 GWATGISATAIQGLLCLLVEGGADNVNQCFLEASRFGSTELVRILLQIAQRNSLDVDVDL 371
           GWA+G+SAT IQGLL +LVEGGADNVNQCFLEASRFGSTELVR+LLQIAQRNSLDVDVDL
Sbjct: 311 GWASGMSATVIQGLLGMLVEGGADNVNQCFLEASRFGSTELVRVLLQIAQRNSLDVDVDL 370

Query: 372 ALGFASHYCKIGTMECLVEEGNAIAFLGPLMRAAERGCLPVVEWFVKRGCQDMELCLALT 431
           ALGFASHYCKIGTM+CLVEEGNAIAFLGPLMRAAERGC+ VV+WFVKRGC+DMELCLALT
Sbjct: 371 ALGFASHYCKIGTMKCLVEEGNAIAFLGPLMRAAERGCMQVVQWFVKRGCRDMELCLALT 430

Query: 432 AATSSSQINVAAYLLPHVPQHVLAALSIEILKAAGERSSGSLDGVEFLLHSNFLGDPSAT 491
           AATSS Q+ VAAYLLP VP  VL ALSIEILKAAGERS GSL GVEFLL S+FLGD +AT
Sbjct: 431 AATSSCQVEVAAYLLPRVPPPVLTALSIEILKAAGERSGGSLQGVEFLLKSDFLGDSTAT 490

Query: 492 YAVADSISKSS-DESVAPELREFLREHWSEAAYLDGLRQGQENYLNFVRILRWGGSPISL 551
           Y+VADSI++SS DESV  +L+ FL+EHWSE+A+  G+R+  ++++NF+R+L+ G S ISL
Sbjct: 491 YSVADSIARSSEDESVPSDLKSFLQEHWSESAFEKGMRESHDDFMNFMRVLKKGESAISL 550

Query: 552 RDIPPPLRVAIAYLPLYRECVKVDGYLFSQKLRGQLVEAATRLGGGGGVLEEVSKGRELM 611
           RD+P PLRVAIAY+PLYREC+K DG L SQ+LRGQLVEA  +L G    + EVS+ R LM
Sbjct: 551 RDLPAPLRVAIAYMPLYRECMKADGRLLSQRLRGQLVEAVRQLQGCAVAVVEVSQTRNLM 606

Query: 612 AVLEHYL 615
           AVLEH+L
Sbjct: 611 AVLEHHL 606

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BLAST of CmaCh05G004360 vs. TAIR 10
Match: AT3G59910.1 (Ankyrin repeat family protein )

HSP 1 Score: 827.0 bits (2135), Expect = 1.0e-239
Identity = 436/607 (71.83%), Postives = 498/607 (82.04%), Query Frame = 0


Query: 12  NVADEALMFDHINMETKTEEDGIDIPKSDVYAPASEKGEGSSVVFSREGPLVKKESVLAF 71
           N++D+    +    E KTE     I  S  +    E GEGS VVFSRE PL+ K+S    
Sbjct: 11  NLSDQMYPDEPFCSEMKTE----TIASSQKF----EGGEGSKVVFSREAPLIGKDSA--- 70

Query: 72  GCNSNE---QSPKSMLVVTDYKQGKKGKSGHEKKLSRQDRFELGRLFQGAVSSHDWELAD 131
           G NS E    S K +    D    +K     +KKL+RQ+R ELGRLFQGAV+S DWELA+
Sbjct: 71  GTNSGECCGCSAKKLNFKGDDDLVEKENIEQQKKLNRQERIELGRLFQGAVTSLDWELAE 130

Query: 132 SLIALADHQTLNDALCITLDSIWFLSTQQELNGITGLIKNIIVSGAYDFTRAALRTSFLA 191
            LI LAD QTLND LC+ LDS+WFLST+ E  GITGLIK II  GA+DFTRA LRTSFLA
Sbjct: 131 RLIQLADPQTLNDLLCVGLDSVWFLSTKPEFQGITGLIKKIICHGAHDFTRATLRTSFLA 190

Query: 192 SCVSACQSRTMSLADTVTVMAQRLRERLQECNGDEVLKAEAGTKVQKFTEWALKCIGFHS 251
           SCVSACQSRTMSL+DTVTVMAQRL ERLQECNGDE+LKAEAG KVQKFTEWALKCIGFHS
Sbjct: 191 SCVSACQSRTMSLSDTVTVMAQRLHERLQECNGDEILKAEAGAKVQKFTEWALKCIGFHS 250

Query: 252 GCQGNKDRVTQSSAAEIQLQLSAFKMFLDFAGNQLTGKDFTEAFDAACFPLTLFSSSFDP 311
            CQG KDRV+Q+SAAEI+LQLSAFKMFLD AGN L+G+DFTEAFDAACFPLTLFS+SFDP
Sbjct: 251 RCQGAKDRVSQNSAAEIELQLSAFKMFLDLAGNHLSGRDFTEAFDAACFPLTLFSNSFDP 310

Query: 312 GWATGISATAIQGLLCLLVEGGADNVNQCFLEASRFGSTELVRILLQIAQRNSLDVDVDL 371
           GWA+G+SAT IQGLL +LVEGGADNVNQCFLEASRFGSTELVR+LLQIAQRNSLDVDVDL
Sbjct: 311 GWASGMSATVIQGLLGMLVEGGADNVNQCFLEASRFGSTELVRVLLQIAQRNSLDVDVDL 370

Query: 372 ALGFASHYCKIGTMECLVEEGNAIAFLGPLMRAAERGCLPVVEWFVKRGCQDMELCLALT 431
           ALGFASHYCKIGTM+CLVEEGNAIAFLGPLMRAAERGC+ VV+WFVKRGC+DMELCLALT
Sbjct: 371 ALGFASHYCKIGTMKCLVEEGNAIAFLGPLMRAAERGCMQVVQWFVKRGCRDMELCLALT 430

Query: 432 AATSSSQINVAAYLLPHVPQHVLAALSIEILKAAGERSSGSLDGVEFLLHSNFLGDPSAT 491
           AATSS Q+ VAAYLLP VP  VL ALSIEILKAAGERS GSL GVEFLL S+FLGD +AT
Sbjct: 431 AATSSCQVEVAAYLLPRVPPPVLTALSIEILKAAGERSGGSLQGVEFLLKSDFLGDSTAT 490

Query: 492 YAVADSISKSS-DESVAPELREFLREHWSEAAYLDGLRQGQENYLNFVRILRWGGSPISL 551
           Y+VADSI++SS DESV  +L+ FL+EHWSE+A+  G+R+  ++++NF+R+L+ G S ISL
Sbjct: 491 YSVADSIARSSEDESVPSDLKSFLQEHWSESAFEKGMRESHDDFMNFMRVLKKGESAISL 550

Query: 552 RDIPPPLRVAIAYLPLYRECVKVDGYLFSQKLRGQLVEAATRLGGGGGVLEEVSKGRELM 611
           RD+P PLRVAIAY+PLYREC+K DG L SQ+LRGQLVEA  +L G    + EVS+ R LM
Sbjct: 551 RDLPAPLRVAIAYMPLYRECMKADGRLLSQRLRGQLVEAVRQLQGCAVAVVEVSQTRNLM 606

Query: 612 AVLEHYL 615
           AVLEH+L
Sbjct: 611 AVLEHHL 606

[Close]

BLAST of CmaCh05G004360 vs. TAIR 10
Match: AT2G44090.1 (Ankyrin repeat family protein )

HSP 1 Score: 801.6 bits (2069), Expect = 4.5e-232
Identity = 417/569 (73.29%), Postives = 472/569 (82.95%), Query Frame = 0


Query: 52  SSVVFSREGPLVKKESVLAFGCNSNEQSPKSMLVVTDYKQGKKGKSGHEKKLSRQDRFEL 111
           S VVF+RE PLV    ++      +  + K +         K      +KKL+RQDR EL
Sbjct: 21  SDVVFARESPLV---GIITQPTKCSGSTAKIL---------KCRGLEQQKKLNRQDRIEL 80

Query: 112 GRLFQGAVSSHDWELADSLIALADHQTLNDALCITLDSIWFLSTQQELNGITGLIKNIIV 171
           GRLFQGAVSS DW+L++  I LAD QTLND LCI+LDSIWFLST+ EL GIT LI  II 
Sbjct: 81  GRLFQGAVSSQDWQLSERFIQLADPQTLNDLLCISLDSIWFLSTEHELRGITELIAKIIC 140

Query: 172 SGAYDFTRAALRTSFLASCVSACQSRTMSLADTVTVMAQRLRERLQECNGDEVLKAEAGT 231
            GA D+TRA LRTSFLASCVS+C SRT+SLADTVTVMAQRL ERLQECNGDEVLKAEAG 
Sbjct: 141 HGAQDYTRATLRTSFLASCVSSCHSRTVSLADTVTVMAQRLHERLQECNGDEVLKAEAGA 200

Query: 232 KVQKFTEWALKCIGFHSGCQGNKDRVTQSSAAEIQLQLSAFKMFLDFAGNQLTGKDFTEA 291
           KVQKFTEWALKCIGFHS CQG +D+  Q SAAEIQLQLSAFKMFLD AGN L+GKDFTEA
Sbjct: 201 KVQKFTEWALKCIGFHSRCQGPRDKANQDSAAEIQLQLSAFKMFLDLAGNHLSGKDFTEA 260

Query: 292 FDAACFPLTLFSSSFDPGWATGISATAIQGLLCLLVEGGADNVNQCFLEASRFGSTELVR 351
           FDAACFPLTLFS+SF+PGWA+GISAT I GLL +LVEGGADNVNQCFLEASRFGSTELVR
Sbjct: 261 FDAACFPLTLFSTSFNPGWASGISATVIHGLLGMLVEGGADNVNQCFLEASRFGSTELVR 320

Query: 352 ILLQIAQRNSLDVDVDLALGFASHYCKIGTMECLVEEGNAIAFLGPLMRAAERGCLPVVE 411
           ILLQIAQRNSLDVDVDLALGFASHY KI TM+CLVEEG+AIAFLGPLMRAAERGC+ VV+
Sbjct: 321 ILLQIAQRNSLDVDVDLALGFASHYSKIETMDCLVEEGHAIAFLGPLMRAAERGCMQVVQ 380

Query: 412 WFVKRGCQDMELCLALTAATSSSQINVAAYLLPHVPQHVLAALSIEILKAAGERSSGSLD 471
           WFVKRGC++MELCLALTAATSSSQ+ VAAYLLPHVP+ VL ALSIEILKAAGERS GSL 
Sbjct: 381 WFVKRGCREMELCLALTAATSSSQVEVAAYLLPHVPRPVLTALSIEILKAAGERSGGSLH 440

Query: 472 GVEFLLHSNFLGDPSATYAVADSISKSSDESVAPELREFLREHWSEAAYLDGLRQGQENY 531
           GVEFLL S+FLGDP+ATY+VAD+I+KS DESV  +L+ FL+E WSEAA+  GL++ +ENY
Sbjct: 441 GVEFLLKSDFLGDPAATYSVADTIAKSEDESVPSDLKSFLQEQWSEAAFNQGLKESRENY 500

Query: 532 LNFVRILRWGGSPISLRDIPPPLRVAIAYLPLYRECVKVDGYLFSQKLRGQLVEAATRLG 591
           +NF+R+L+ G S ISL+D+P PLRVAIAY+PLYRECV   G L SQKLRGQLVEAAT+L 
Sbjct: 501 MNFMRVLKLGESAISLKDLPAPLRVAIAYMPLYRECVDAGGRLLSQKLRGQLVEAATQLE 560

Query: 592 GGGGVLEEVSKG-RELMAVLEHYLPPFLL 620
           G     EEV KG  +LM +LEH+LP FL+
Sbjct: 561 GFDVDTEEVKKGHHQLMTILEHHLPLFLV 577

[Close]

BLAST of CmaCh05G004360 vs. TAIR 10
Match: AT2G44090.2 (Ankyrin repeat family protein )

HSP 1 Score: 801.6 bits (2069), Expect = 4.5e-232
Identity = 417/569 (73.29%), Postives = 472/569 (82.95%), Query Frame = 0


Query: 52  SSVVFSREGPLVKKESVLAFGCNSNEQSPKSMLVVTDYKQGKKGKSGHEKKLSRQDRFEL 111
           S VVF+RE PLV    ++      +  + K +         K      +KKL+RQDR EL
Sbjct: 21  SDVVFARESPLV---GIITQPTKCSGSTAKIL---------KCRGLEQQKKLNRQDRIEL 80

Query: 112 GRLFQGAVSSHDWELADSLIALADHQTLNDALCITLDSIWFLSTQQELNGITGLIKNIIV 171
           GRLFQGAVSS DW+L++  I LAD QTLND LCI+LDSIWFLST+ EL GIT LI  II 
Sbjct: 81  GRLFQGAVSSQDWQLSERFIQLADPQTLNDLLCISLDSIWFLSTEHELRGITELIAKIIC 140

Query: 172 SGAYDFTRAALRTSFLASCVSACQSRTMSLADTVTVMAQRLRERLQECNGDEVLKAEAGT 231
            GA D+TRA LRTSFLASCVS+C SRT+SLADTVTVMAQRL ERLQECNGDEVLKAEAG 
Sbjct: 141 HGAQDYTRATLRTSFLASCVSSCHSRTVSLADTVTVMAQRLHERLQECNGDEVLKAEAGA 200

Query: 232 KVQKFTEWALKCIGFHSGCQGNKDRVTQSSAAEIQLQLSAFKMFLDFAGNQLTGKDFTEA 291
           KVQKFTEWALKCIGFHS CQG +D+  Q SAAEIQLQLSAFKMFLD AGN L+GKDFTEA
Sbjct: 201 KVQKFTEWALKCIGFHSRCQGPRDKANQDSAAEIQLQLSAFKMFLDLAGNHLSGKDFTEA 260

Query: 292 FDAACFPLTLFSSSFDPGWATGISATAIQGLLCLLVEGGADNVNQCFLEASRFGSTELVR 351
           FDAACFPLTLFS+SF+PGWA+GISAT I GLL +LVEGGADNVNQCFLEASRFGSTELVR
Sbjct: 261 FDAACFPLTLFSTSFNPGWASGISATVIHGLLGMLVEGGADNVNQCFLEASRFGSTELVR 320

Query: 352 ILLQIAQRNSLDVDVDLALGFASHYCKIGTMECLVEEGNAIAFLGPLMRAAERGCLPVVE 411
           ILLQIAQRNSLDVDVDLALGFASHY KI TM+CLVEEG+AIAFLGPLMRAAERGC+ VV+
Sbjct: 321 ILLQIAQRNSLDVDVDLALGFASHYSKIETMDCLVEEGHAIAFLGPLMRAAERGCMQVVQ 380

Query: 412 WFVKRGCQDMELCLALTAATSSSQINVAAYLLPHVPQHVLAALSIEILKAAGERSSGSLD 471
           WFVKRGC++MELCLALTAATSSSQ+ VAAYLLPHVP+ VL ALSIEILKAAGERS GSL 
Sbjct: 381 WFVKRGCREMELCLALTAATSSSQVEVAAYLLPHVPRPVLTALSIEILKAAGERSGGSLH 440

Query: 472 GVEFLLHSNFLGDPSATYAVADSISKSSDESVAPELREFLREHWSEAAYLDGLRQGQENY 531
           GVEFLL S+FLGDP+ATY+VAD+I+KS DESV  +L+ FL+E WSEAA+  GL++ +ENY
Sbjct: 441 GVEFLLKSDFLGDPAATYSVADTIAKSEDESVPSDLKSFLQEQWSEAAFNQGLKESRENY 500

Query: 532 LNFVRILRWGGSPISLRDIPPPLRVAIAYLPLYRECVKVDGYLFSQKLRGQLVEAATRLG 591
           +NF+R+L+ G S ISL+D+P PLRVAIAY+PLYRECV   G L SQKLRGQLVEAAT+L 
Sbjct: 501 MNFMRVLKLGESAISLKDLPAPLRVAIAYMPLYRECVDAGGRLLSQKLRGQLVEAATQLE 560

Query: 592 GGGGVLEEVSKG-RELMAVLEHYLPPFLL 620
           G     EEV KG  +LM +LEH+LP FL+
Sbjct: 561 GFDVDTEEVKKGHHQLMTILEHHLPLFLV 577

The following BLAST results are available for this feature:

BLAST of CmaCh05G004360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1Y3	1.4e-238	71.83	Ankyrin repeat protein SKIP35 OS=Arabidopsis thaliana OX=3702 GN=SKIP35 PE=1 SV=...	[more]

BLAST of CmaCh05G004360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59910.1	1.0e-239	71.83	Ankyrin repeat family protein	[more]
AT2G44090.1	4.5e-232	73.29	Ankyrin repeat family protein	[more]
AT2G44090.2	4.5e-232	73.29	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 317..453 e-value: 2.7E-8 score: 35.3
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 335..447
None	No IPR available	PANTHER	PTHR36024:SF1	ANKYRIN REPEAT PROTEIN SKIP35	coord: 23..621
IPR044956	Ankyrin repeat protein SKIP35	PANTHER	PTHR36024	ANKYRIN REPEAT PROTEIN SKIP35	coord: 23..621

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G004360.1	CmaCh05G004360.1	mRNA