CmaCh05G004040 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G004040
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	GTP-binding nuclear protein
Location	Cma_Chr05: 1766806 .. 1774318 (-)
RNA-Seq Expression	CmaCh05G004040
Synteny	CmaCh05G004040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATTTCATAAATGGCAACTTCCGTTATTCTTCGCCAACCCCAAGGGCTTCTTTGTATCCTCCCATGCATATAATCTCCCTCTCCCCCTCCTTCTCTCTCGGCATCTCTCCTCACTCCGTCTCTCTCTCCCTCCCTCTCTCTTCCTTCAGAGAACTTCCACAATGCAGAACGCCGCCGTCATCTTCTTGTCGGTGCTTCTCTCCGCCGCCTTCCATCCCGCTCTCAGCCTCGTCGACGGTAAGCTTCCTCTACCGCTTCTACTCTCCGATCACCTTCTCACCGGAATATTGCGTTTTTTGTTCCTTTGATTAGGAACTTCAGTTCCTGTTTACTTTCTGGGTGAGCAAATACGATTATTTTAAAATAGTTTTAAAATAATTTTAAATAATAAAAAGGTTAAAAAAAAATTGTCCCTTAGAGCGTAAAATTTACTTTCTATGGATAATGACCAATCCGACCGAGCTGGGAGTCCAGTCGGTCACGTGATAGCGAAATATCAACAATTGCAGACCGACACGTTAAAGCTGTGTATACAGAATTCGTTCTTATGGACGGTTGTGATTGAATTTGGAGATGGGCCCCACTGCTTCGCTGGCGCTTTATAAGCTGATGGGAAATTGGAATCCCCAAATCCCCCACATGATTTTTCAATTTTAACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAATTATATTATACAAAATGCCCGACTTTGAATTTTGTTTGAATGGTGTCTTTAATTTAAAATTTAAAATTTAATTTATGTTTTTTCAGGGTATTTGCCAAATGGGGATTTCGAGAGAGGTCCAAAGGCGTCGGACATGAACGGGACGGTGGTGAAAGGGCCATATGCAATACCGGAATGGGAGATTTCAGGTTTCGTGGAGTACATAAAGTCAGGGCAGAAACAAGGCGACATGTTGCTGGTAGTGCCGGAGGGGGCGTTCGCCGTCCGGCTAGGGAACGAGGCGTCGATCAAGCAGAAGGTCAAAGTAGTGAAAGGGCTTTACTATTCCATCACGTTCAGCGCCGCTCGAACCTGCGCTCAAGAGGAGCGCCTCAACATCTCTGTTGCGCCCGACTGGGGTGTCCTGCCGATGCAAACTCTGTACAACAGCAATGGCTGGGACTTGTACGCTTGGGCCTTCCAAGCCACCTCCGACGAGGTTGCCATTCTCATCCATAACCCCGGCGAGGAGGAAGACCCCGCCTGTGGCCCTCTCATCGACGCCATTGCCATTAAAACCCTCTACCCTCCCAAGGCCTCCAACGGTGCGTCTCTGTTCTAAAAATTAATTGCTCACTCAGTAGTTGCTTGAATTTATTGTCTCTGTAACCATGTGGGCAGTGTTCATTGATTGCTCCAACCTGTTAATCGATTCGGTTGTTTTATTGATATGATTCTTGAAGATTTTGGAATTTTCCGGTGATTGAAAACGTCGTCGTTTTGCATTCGACAGATAATCTGGTGAAGAATGGGGATTTCGAAGTCGGCCCATACGTGTTCCCCAACGCGTCGTCAGGCGTTTTGGTCCCACCGAACATCGAAGACGACCACTCTCCGATCCCCGGCTGGATGGTTGAATCTCTCAAGGCTGTCAAATACATCGATTCCGACCACTTCTCCGTCCCAAGCGGGAAGCGCGCCGTCGAGCTCGTTGCCGGAAAAGAAAGCGCGATAGCTCAGATCGTCCGTACGATCCCTGGAAAAACCTATATCCTGTCGTTCGTCGTCGGCGATGCGAGTAACTCGTGTGAAGGATCTATGGTGGTTGAAGCGTTCGCCGGAAAGAATACACTGAAAGTGCCGTACCAGTCGAAAGGAAACGGCGGATCTAAACCAGCGGCGCTGAAATTCCAGGCGGAGTCGACGAGGACGCGGATTATGTTCCTGAGCACATTTTACACCATGCGAAGCGATGATTTCTCGTCGCTGTGCGGGCCGGTGCTCGATAAGGTGAGATTGTTGAGCGTTCGAAACCCTAAGGCGTGATGAAGAGGAAGAAAATGGATGGAGATTTGAATTATATAATAATAGTAAGAAAATTGAAGGAGATCTTCTCTGTGAGTGGTTTTGCTTGTAATCTTGACGAAGAAGAAGAAGAAACAAAAGAGAAGGGAAGAGAAGAAAGAGGGGTTTTAGCGGAAAAATTAATAAATAAATATATAGTAATTAATACAAAATATAATTAATATATATAATGTATGCGGATCGGATAGGGCTTTCTATATAATAGTGTGATTTTAAGGCGGAGCGGTTTTTCTGTAATTGTGATGTGGGAAAAAAATCGACTTAAAATCGATTTTTTTATTACTTTTTAATGAATTACAATTACCATATTTCATGATTAATATTTTTAATTTTAAATTATATATTTCATTTATTTTGTCGTACTCTTCCCAGTTCTGATTTCCCTGGCTGCTGGCCTCTGGGGTCCACCTGTTACTGTTTCGGCTGATTTAAATCAATTTTTATTTATTTTATATCATTAAAAATTTATATGTTTTTAGAGAAAATGGATCTTGTCGTTTCTAAGATGGATAAATTTATGGTTTAAGGCAGAGAAAAACGAATTTTTAATGATGAAAATTACCGGATTAGTCTATTGGGAGTTGTCAAATTCAATTTGTCATTTACCATTTTTTTTTTATTAATAATACATAAAATAAGTTTTATTATTTTTATTTTACTATTTAAAATTAAATTCGTAACTAACTGATATATCTAGTTTTAGGAAATAATTTTGACATTATATATTTTTATTTATAATTAAAAGATTTGGCTCATTGGTGGTTAGTTATTATTATTATTTTAATTTCTATTTTGATCTATTTTTTTAAAAAATAAAATTAACATAAATTTAGAAAAAAGAGGCAAGAAAAAAATTAGGAAACTAAAGTTGGAACCAAAAAATATATATATTTTTTGAAAATATAAGGACGCAATTAAACTAATATTAAAATAAATATTTTTCCCTTCAAAATTTAGTATACCTTCCTATGTCAATCTCAAAGCCCACAATTGTTTGGGCCCAAGCCCAATGCGATAAGCCTTCTAACTCGTTATTATTTGATCGCCACGTGTAGGGCTGAAATTCAAGCGGAATTTTGAAGCGGGACTTAAATCCAAGGGTGCAGAAAATCGCGTCAAATAAAAGTCGAACTCCTTCCCTTCACCGAGTATAAAAGACCTCCCACGACCGTCCGTAACACTCTGCCTTCCATTACAGACCTTTTGTTCGTCTAAAATTCTACGCTGTTATCTTCATTTCTTAATCCGCAGTTCCAGATAGACATTGTCGATGGTTAGATTTCTTCTCTCTGCTCTCCTTTTCCGCCTATCATTCGATGTTTTCAATGCTTCTACTTAGTTTCGGTTTCATTGCTTTGCTCAGGCGCTGCCAAATCAGGCCACCGTGGATTATCCTAGCTTCAAGCTTGTAATTGTTGGCGATGGTGGAACAGGTATGGACATAGATTTATTAGTTTCATTTTCTCGGCACTTCAGCACGATTTTCCATGTTTGTGTAGTTTTTAGGAACCAGAATTATATGATGATGCTCCTCGGCTTTTACTGAACTATATCTTCTTTAGTAGAATAGAAATTGTGTCTTCTTTCTCCGTTTTACTTAGCGTATGAATGAGATTGGAGATAATGCATAAACAGGCTATTGGACTAGGCTTTCTATTGGAAGGCGTAACTTACTTCATGTGTATTTTGAGATTAGAGATTGTTAGATCTACGCATTGCTTTTGTAATGATGTCATTAACCTCTGACGGAGGATTGTGTTCTGATCCAGGGAAGACAACCTTTGTCAAACGTCATCTTACTGGAGAGTTCGAGAAGAAATATGAACGTAAGAATGAACTACGTTGTTAATTAGTCGATCGTCCTTTAATGAATGATATATTTGCAAGGATGAAGCAGTATTAATATCTGGTGTGACTTGATTTGTATAGCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACGAACTATGGAAAGATAAGGTTTTACTGCTGGGATACCGCTGGTCAGGAGAAGTTTGGTGGACTTCGAGATGGTTACTAGTAAGTGTTTGTGTGTTGTATCAACTTTTTCTCTGGTTCATGACAAAGATTTTGCTCTGAATACGCTGGAATATATTGTTGGAGCGGTATTTTTCCATGTGGTCTGATCATTGTGCTTGCACGCTCTGAAGTTAGTGTTTTCCGTACGAGAGATTTGGTTACTGAATATTTATATTTGCTGAAATCTAGTGCTTCTTTTTGGTCTTATTTTCTAGTAGTTTCTACAATGGAATTGTATTACAGTGTAGTCTATCCGTTTTCGTGAGCCTAATACCTAGCTCAATACCATGGGTGGGAATGTTGAACAGTTTTATCCTAAGATGCCTTTTGAATTTCATTAACCTTGTTTACTGCTACATTATGATCGCTGCTTAAAATCATCAAGTTTTTGGTGGATTATTTCTGCTAGTCTTCTGTTTCTCTCTATCTGACTTTTTGTTTAAGAAGCATCGTATGTTGTAATTTGGCTGGCATGTTTATGTTCAACATTTCTAATTTCGTTCGTTCTCACATGAACATAATGAAAAAAGATTAGAGAAAATGTAAGGATATTAATAGAAATGTGTAATTTGTTTTTCATAGTAAGTGTACAAAGTGTTTTGATATCTTAATTTTGAGTTGTTTTATTGGAAGCGGTCGTCTTCCAAAGTTTTGTTTGGAATTCCTTTATGAACTGTTGTGACAAAGACATTATTTTACTATGATACATACTATGCATCTAGCTTTAACTTCTTCTCTTTGTGTGCTCTCACGAGCTCTGCAGAAATAAGCACGTCTTATCTTATCACTCTGTGTTAATGTTGTATTTAAACGTTGATATTATAATAAGAAATGCAGATTCTATGTTTTATTCTTGCAACACGTAGGAACCAAGATGTACTGTAGTTCTCTTAGAATTTGATGTGGTGCTGTGCTACGCTTGTGTGACTTCAATTAATTGATTGCTTTTCCATGTCTTCCTTAGTGCGTCTGTTTTGTCCATTTTGATCAAGCTTACTTGTTGCTTTGTTGATAACTCCTTCAGTTTAATCTATTCTGACAAGTTTAGTTATGTGATTGTTTTGGCCTTTTTGTTACTATATTTCGATTTTATTTGTTCTAACAAGCATATTTTTCTAACCGTGTTTTATTTTTTTCCTTTTTTTTTGGATTTTTCAGTATTCATGGGCAGTGTGCCATCATCATGTTTGATGTCACTGCTCGTTTAACGTACAAAAATGTTCCAACATGGCACCGTGATCTTTGCAGGTATTATGTTCTTATCACTTGAAAACTCAGGCTTGTATGAAACCATTTTCCTTCAACTTTTAATATGTGTAAAATGAAGGGAAATAGTAAAGTACATGAAAGAGAAATTTTAAAATAAAAGAGAACAATTTTCCCAGTCTTTTTGTATTGTGTTGGTCCTAAAGTTGGCTTTGCTTTGCATTAGGGTTTGTGAGAACATACCGATCGTATTGTGTGGAAACAAGGTCGATGTGAAAAATAGACAGGTTAAAGCAAAGCAGGTGACCTTCCACAGGAAGAAAAATCTCCAGTATTACGAAATCTCTGCAAAGAGTAATTACAACTTCGAGAAGCCCTTCTTGTACCTTGCCAGAAAGCTTGCTGGGTATGTTCTGTTGTTAGTGTTAGTTTGATGTAATTTTGGTTAGTCTTTCTCTGACGTACATTTAGTCTCATCTGTTGACTCATTGACAAATGAATTCGTCTTTTACTGTAACTTGCAGGAACACGGAGCTCCAGTTCGTCGAATCACCTGCCCTGGCTCCTCCTGAAGTCCAAATTGACATGGCTGTACAAGCACAGTAAGTAACTCACTATTAACTCATTAATTTTTTTTTTTTATTAAGTATCACTTTTGGTTCCTAAGCTTTCATAGAAGTAACAATTTAATCCAAACATGTAACAATCTAGTTCTCATACTTATAAATTTATAACAATTTAGTCCATACCAAGATAAATCTCATAAAAAATAAGTGTCAATTTTTATTACGTAAAGACTTAGCTTTTGTAGTTCATAAACCTATTTGTAAGAAAATCCATTAAGTAATAATACTCATGATAGGGACTAAATTATTATTACAACTGGTAAAATGTAAGGACTAAATTGTTATAATTTTAAAATTTCAGAGACTAAATTGTTACTTCGTTGAAAGATAAGATAACGAACTAATTTTGTAACCTTTAGACGTGTGACTCTAGACATCTGCTCTTAGAATTTGCATGGAAGTATAGGTTTTAGGTTATTGATGAGATGGGTGTTACGACTGGCCTTATTTTATAGGGTTAATTTTTAATGGCTTTCTTTCTTGTGTGTTTTAGGCACGAAGCAGAGTTAGCTCAAGCTGCTGCACAACCTCTTCCTGATGAAGACGATGATGCTTTTGAGTAAGCGTTTGTCGTTTTGGCTCAGTGTTTATAGTCATTCTGGTTGTCTGGTCGGTTGGTGGTTGTGTAATTCGCCAAGTGATTGTCATGGTAGGTTTTGGTTTGATGTACTACTTACTACCGTTATCGATTACAGTTTTGATATATGAATGCCATTTTTGCCTTATATTTTCTCAGTATTATATTTAGAACAAGAAATATATCTCTCCGTTAAGTAAAATAGTTCAATACATAATTCACTAGAAAATTGAGAACTCCGGAAGAACAAATACAGAGCCCCT

mRNA sequence

GTATTTCATAAATGGCAACTTCCGTTATTCTTCGCCAACCCCAAGGGCTTCTTTGTATCCTCCCATGCATATAATCTCCCTCTCCCCCTCCTTCTCTCTCGGCATCTCTCCTCACTCCGTCTCTCTCTCCCTCCCTCTCTCTTCCTTCAGAGAACTTCCACAATGCAGAACGCCGCCGTCATCTTCTTGTCGGTGCTTCTCTCCGCCGCCTTCCATCCCGCTCTCAGCCTCGTCGACGGGTATTTGCCAAATGGGGATTTCGAGAGAGGTCCAAAGGCGTCGGACATGAACGGGACGGTGGTGAAAGGGCCATATGCAATACCGGAATGGGAGATTTCAGGTTTCGTGGAGTACATAAAGTCAGGGCAGAAACAAGGCGACATGTTGCTGGTAGTGCCGGAGGGGGCGTTCGCCGTCCGGCTAGGGAACGAGGCGTCGATCAAGCAGAAGGTCAAAGTAGTGAAAGGGCTTTACTATTCCATCACGTTCAGCGCCGCTCGAACCTGCGCTCAAGAGGAGCGCCTCAACATCTCTGTTGCGCCCGACTGGGGTGTCCTGCCGATGCAAACTCTGTACAACAGCAATGGCTGGGACTTGTACGCTTGGGCCTTCCAAGCCACCTCCGACGAGGTTGCCATTCTCATCCATAACCCCGGCGAGGAGGAAGACCCCGCCTGTGGCCCTCTCATCGACGCCATTGCCATTAAAACCCTCTACCCTCCCAAGGCCTCCAACGATAATCTGGTGAAGAATGGGGATTTCGAAGTCGGCCCATACGTGTTCCCCAACGCGTCGTCAGGCGTTTTGGTCCCACCGAACATCGAAGACGACCACTCTCCGATCCCCGGCTGGATGGTTGAATCTCTCAAGGCTGTCAAATACATCGATTCCGACCACTTCTCCGTCCCAAGCGGGAAGCGCGCCGTCGAGCTCGTTGCCGGAAAAGAAAGCGCGATAGCTCAGATCGTCCGTACGATCCCTGGAAAAACCTATATCCTGTCGTTCGTCGTCGGCGATGCGAGTAACTCGTGTGAAGGATCTATGGTGGTTGAAGCGTTCGCCGGAAAGAATACACTGAAAGTGCCGTACCAGTCGAAAGGAAACGGCGGATCTAAACCAGCGGCGCTGAAATTCCAGGCGGAGTCGACGAGGACGCGGATTATGTTCCTGAGCACATTTTACACCATGCGAAGCGATGATTTCTCGTCGCTGTGCGGGCCGGTGCTCGATAAGGCGCTGCCAAATCAGGCCACCGTGGATTATCCTAGCTTCAAGCTTGTAATTGTTGGCGATGGTGGAACAGGGAAGACAACCTTTGTCAAACGTCATCTTACTGGAGAGTTCGAGAAGAAATATGAACCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACGAACTATGGAAAGATAAGGTTTTACTGCTGGGATACCGCTGGTCAGGAGAAGTTTGGTGGACTTCGAGATGGTTACTATATTCATGGGCAGTGTGCCATCATCATGTTTGATGTCACTGCTCGTTTAACGTACAAAAATGTTCCAACATGGCACCGTGATCTTTGCAGGGTTTGTGAGAACATACCGATCGTATTGTGTGGAAACAAGGTCGATGTGAAAAATAGACAGGTTAAAGCAAAGCAGGTGACCTTCCACAGGAAGAAAAATCTCCAGTATTACGAAATCTCTGCAAAGAGTAATTACAACTTCGAGAAGCCCTTCTTGTACCTTGCCAGAAAGCTTGCTGGGCACGAAGCAGAGTTAGCTCAAGCTGCTGCACAACCTCTTCCTGATGAAGACGATGATGCTTTTGAGTAAGCGTTTGTCGTTTTGGCTCAGTGTTTATAGTCATTCTGGTTGTCTGGTCGGTTGGTGGTTGTGTAATTCGCCAAGTGATTGTCATGGTAGGTTTTGGTTTGATGTACTACTTACTACCGTTATCGATTACAGTTTTGATATATGAATGCCATTTTTGCCTTATATTTTCTCAGTATTATATTTAGAACAAGAAATATATCTCTCCGTTAAGTAAAATAGTTCAATACATAATTCACTAGAAAATTGAGAACTCCGGAAGAACAAATACAGAGCCCCT

Coding sequence (CDS)

ATGCAGAACGCCGCCGTCATCTTCTTGTCGGTGCTTCTCTCCGCCGCCTTCCATCCCGCTCTCAGCCTCGTCGACGGGTATTTGCCAAATGGGGATTTCGAGAGAGGTCCAAAGGCGTCGGACATGAACGGGACGGTGGTGAAAGGGCCATATGCAATACCGGAATGGGAGATTTCAGGTTTCGTGGAGTACATAAAGTCAGGGCAGAAACAAGGCGACATGTTGCTGGTAGTGCCGGAGGGGGCGTTCGCCGTCCGGCTAGGGAACGAGGCGTCGATCAAGCAGAAGGTCAAAGTAGTGAAAGGGCTTTACTATTCCATCACGTTCAGCGCCGCTCGAACCTGCGCTCAAGAGGAGCGCCTCAACATCTCTGTTGCGCCCGACTGGGGTGTCCTGCCGATGCAAACTCTGTACAACAGCAATGGCTGGGACTTGTACGCTTGGGCCTTCCAAGCCACCTCCGACGAGGTTGCCATTCTCATCCATAACCCCGGCGAGGAGGAAGACCCCGCCTGTGGCCCTCTCATCGACGCCATTGCCATTAAAACCCTCTACCCTCCCAAGGCCTCCAACGATAATCTGGTGAAGAATGGGGATTTCGAAGTCGGCCCATACGTGTTCCCCAACGCGTCGTCAGGCGTTTTGGTCCCACCGAACATCGAAGACGACCACTCTCCGATCCCCGGCTGGATGGTTGAATCTCTCAAGGCTGTCAAATACATCGATTCCGACCACTTCTCCGTCCCAAGCGGGAAGCGCGCCGTCGAGCTCGTTGCCGGAAAAGAAAGCGCGATAGCTCAGATCGTCCGTACGATCCCTGGAAAAACCTATATCCTGTCGTTCGTCGTCGGCGATGCGAGTAACTCGTGTGAAGGATCTATGGTGGTTGAAGCGTTCGCCGGAAAGAATACACTGAAAGTGCCGTACCAGTCGAAAGGAAACGGCGGATCTAAACCAGCGGCGCTGAAATTCCAGGCGGAGTCGACGAGGACGCGGATTATGTTCCTGAGCACATTTTACACCATGCGAAGCGATGATTTCTCGTCGCTGTGCGGGCCGGTGCTCGATAAGGCGCTGCCAAATCAGGCCACCGTGGATTATCCTAGCTTCAAGCTTGTAATTGTTGGCGATGGTGGAACAGGGAAGACAACCTTTGTCAAACGTCATCTTACTGGAGAGTTCGAGAAGAAATATGAACCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACGAACTATGGAAAGATAAGGTTTTACTGCTGGGATACCGCTGGTCAGGAGAAGTTTGGTGGACTTCGAGATGGTTACTATATTCATGGGCAGTGTGCCATCATCATGTTTGATGTCACTGCTCGTTTAACGTACAAAAATGTTCCAACATGGCACCGTGATCTTTGCAGGGTTTGTGAGAACATACCGATCGTATTGTGTGGAAACAAGGTCGATGTGAAAAATAGACAGGTTAAAGCAAAGCAGGTGACCTTCCACAGGAAGAAAAATCTCCAGTATTACGAAATCTCTGCAAAGAGTAATTACAACTTCGAGAAGCCCTTCTTGTACCTTGCCAGAAAGCTTGCTGGGCACGAAGCAGAGTTAGCTCAAGCTGCTGCACAACCTCTTCCTGATGAAGACGATGATGCTTTTGAGTAA

Protein sequence

MQNAAVIFLSVLLSAAFHPALSLVDGYLPNGDFERGPKASDMNGTVVKGPYAIPEWEISGFVEYIKSGQKQGDMLLVVPEGAFAVRLGNEASIKQKVKVVKGLYYSITFSAARTCAQEERLNISVAPDWGVLPMQTLYNSNGWDLYAWAFQATSDEVAILIHNPGEEEDPACGPLIDAIAIKTLYPPKASNDNLVKNGDFEVGPYVFPNASSGVLVPPNIEDDHSPIPGWMVESLKAVKYIDSDHFSVPSGKRAVELVAGKESAIAQIVRTIPGKTYILSFVVGDASNSCEGSMVVEAFAGKNTLKVPYQSKGNGGSKPAALKFQAESTRTRIMFLSTFYTMRSDDFSSLCGPVLDKALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGHEAELAQAAAQPLPDEDDDAFE

Homology

[Close]

BLAST of CmaCh05G004040 vs. ExPASy Swiss-Prot
Match: Q8H156 (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 SV=2)

HSP 1 Score: 384.4 bits (986), Expect = 2.1e-105
Identity = 188/220 (85.45%), Postives = 190/220 (86.36%), Query Frame = 0


Query: 358 ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 417
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 418 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 477
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 478 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG-------- 537
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG        
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVE 181

Query: 538 ------------------HEAELAQAAAQPLPDEDDDAFE 552
                             HEAELA AA+QPLPD+DDD FE
Sbjct: 182 SPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of CmaCh05G004040 vs. ExPASy Swiss-Prot
Match: P41917 (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 SV=3)

HSP 1 Score: 383.3 bits (983), Expect = 4.8e-105
Identity = 188/220 (85.45%), Postives = 191/220 (86.82%), Query Frame = 0


Query: 358 ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 417
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 418 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 477
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 478 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG-------- 537
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG        
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVE 181

Query: 538 ------------------HEAELAQAAAQPLPDEDDDAFE 552
                             +EA+LA AAAQPLPD+DDDAFE
Sbjct: 182 SPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of CmaCh05G004040 vs. ExPASy Swiss-Prot
Match: P41916 (GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana OX=3702 GN=RAN1 PE=1 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 6.2e-105
Identity = 188/220 (85.45%), Postives = 190/220 (86.36%), Query Frame = 0


Query: 358 ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 417
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 418 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 477
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 478 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG-------- 537
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG        
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVE 181

Query: 538 ------------------HEAELAQAAAQPLPDEDDDAFE 552
                             +EAEL QAAAQPLPD+DDD FE
Sbjct: 182 TPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of CmaCh05G004040 vs. ExPASy Swiss-Prot
Match: P38546 (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum OX=4081 GN=RAN1 PE=2 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.4e-104
Identity = 187/220 (85.00%), Postives = 189/220 (85.91%), Query Frame = 0


Query: 358 ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 417
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 418 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 477
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 478 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG-------- 537
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG        
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFVE 181

Query: 538 ------------------HEAELAQAAAQPLPDEDDDAFE 552
                             HE EL QAA QPLPD+DD+AFE
Sbjct: 182 SPALAPPEVHIDLAAQALHEEELQQAANQPLPDDDDEAFE 221

[Close]

BLAST of CmaCh05G004040 vs. ExPASy Swiss-Prot
Match: A2WSI7 (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica OX=39946 GN=RAN1 PE=2 SV=2)

HSP 1 Score: 381.3 bits (978), Expect = 1.8e-104
Identity = 186/220 (84.55%), Postives = 189/220 (85.91%), Query Frame = 0


Query: 358 ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 417
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 418 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 477
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPIV 121

Query: 478 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG-------- 537
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYE+SAKSNYNFEKPFLYLARKLAG        
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFVE 181

Query: 538 ------------------HEAELAQAAAQPLPDEDDDAFE 552
                             HEAELA AAAQPLPD+DDD  E
Sbjct: 182 TPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221

[Close]

BLAST of CmaCh05G004040 vs. TAIR 10
Match: AT5G11420.1 (Protein of unknown function, DUF642 )

HSP 1 Score: 552.7 bits (1423), Expect = 3.2e-157
Identity = 260/356 (73.03%), Postives = 304/356 (85.39%), Query Frame = 0


Query: 1   MQNAAVIFLSVLLSAAFHPALSLVDGYLPNGDFERGPKASDMNGTVVKGPYAIPEWEISG 60
           M+  ++ FL VLL A     +   DG LPNGDFE GPK SDM GT V    AIP WE+SG
Sbjct: 1   MKGGSLSFLFVLLIATITSVICFSDGMLPNGDFELGPKPSDMKGTQVINKKAIPSWELSG 60

Query: 61  FVEYIKSGQKQGDMLLVVPEGAFAVRLGNEASIKQKVKVVKGLYYSITFSAARTCAQEER 120
           FVEYIKSGQKQGDMLLVVP G FA+RLGNEASIKQ++ V KG+YYS+TFSAARTCAQ+ER
Sbjct: 61  FVEYIKSGQKQGDMLLVVPAGKFAIRLGNEASIKQRLNVTKGMYYSLTFSAARTCAQDER 120

Query: 121 LNISVAPDWGVLPMQTLYNSNGWDLYAWAFQATSDEVAILIHNPGEEEDPACGPLIDAIA 180
           LNISVAPD GV+P+QT+Y+S+GWDLYAWAFQA S+   I+IHNPGEEEDPACGPLID +A
Sbjct: 121 LNISVAPDSGVIPIQTVYSSSGWDLYAWAFQAESNVAEIVIHNPGEEEDPACGPLIDGVA 180

Query: 181 IKTLYPPKASNDNLVKNGDFEVGPYVFPNASSGVLVPPNIEDDHSPIPGWMVESLKAVKY 240
           IK LYPP+ +N N++KNG FE GPYV PNA++GVLVPP IEDDHSP+P WMVESLKA+KY
Sbjct: 181 IKALYPPRPTNKNILKNGGFEEGPYVLPNATTGVLVPPFIEDDHSPLPAWMVESLKAIKY 240

Query: 241 IDSDHFSVPSGKRAVELVAGKESAIAQIVRTIPGKTYILSFVVGDASNSCEGSMVVEAFA 300
           +D +HFSVP G+RAVELVAGKESAIAQ+ RT+ GKTY+LSF VGDA+N+C+GSMVVEAFA
Sbjct: 241 VDVEHFSVPQGRRAVELVAGKESAIAQVARTVVGKTYVLSFAVGDANNACQGSMVVEAFA 300

Query: 301 GKNTLKVPYQSKGNGGSKPAALKFQAESTRTRIMFLSTFYTMRSDDFSSLCGPVLD 357
           GK+TLKVPY+S+G GG K A+L+F A STRTR+MF STFY+MRSDDFSSLCGPV+D
Sbjct: 301 GKDTLKVPYESRGKGGFKRASLRFVAVSTRTRVMFYSTFYSMRSDDFSSLCGPVID 356

[Close]

BLAST of CmaCh05G004040 vs. TAIR 10
Match: AT5G25460.1 (Protein of unknown function, DUF642 )

HSP 1 Score: 539.7 bits (1389), Expect = 2.8e-153
Identity = 255/359 (71.03%), Postives = 303/359 (84.40%), Query Frame = 0


Query: 1   MQNAAVIFLSVLLSAAFHPALSLV---DGYLPNGDFERGPKASDMNGTVVKGPYAIPEWE 60
           M+   V+   +L  A    A S V   DG LPNGDFE GPK SDM GT +    AIP WE
Sbjct: 1   MEGVTVVSFFLLFIATAMAAKSTVSFRDGMLPNGDFELGPKPSDMKGTEILNKLAIPNWE 60

Query: 61  ISGFVEYIKSGQKQGDMLLVVPEGAFAVRLGNEASIKQKVKVVKGLYYSITFSAARTCAQ 120
           ++GFVEYIKSG KQGDMLLVVP G FAVRLGNEASIKQ++KVVKG+YYS+TFSAARTCAQ
Sbjct: 61  VTGFVEYIKSGHKQGDMLLVVPAGKFAVRLGNEASIKQRLKVVKGMYYSLTFSAARTCAQ 120

Query: 121 EERLNISVAPDWGVLPMQTLYNSNGWDLYAWAFQATSDEVAILIHNPGEEEDPACGPLID 180
           +ERLNISVAPD GV+P+QT+Y+S+GWDLYAWAFQA SD   ++IHNPG EEDPACGPLID
Sbjct: 121 DERLNISVAPDSGVIPIQTVYSSSGWDLYAWAFQAESDVAEVVIHNPGVEEDPACGPLID 180

Query: 181 AIAIKTLYPPKASNDNLVKNGDFEVGPYVFPNASSGVLVPPNIEDDHSPIPGWMVESLKA 240
            +A+++LYPP+ +N N++KNG FE GP V P +++GVL+PP IEDDHSP+PGWMVESLKA
Sbjct: 181 GVAMRSLYPPRPTNKNILKNGGFEEGPLVLPGSTTGVLIPPFIEDDHSPLPGWMVESLKA 240

Query: 241 VKYIDSDHFSVPSGKRAVELVAGKESAIAQIVRTIPGKTYILSFVVGDASNSCEGSMVVE 300
           VKY+D +HFSVP G+RA+ELVAGKESAIAQ+VRT+ GKTY+LSF VGDA+N+C+GSMVVE
Sbjct: 241 VKYVDVEHFSVPQGRRAIELVAGKESAIAQVVRTVIGKTYVLSFAVGDANNACKGSMVVE 300

Query: 301 AFAGKNTLKVPYQSKGNGGSKPAALKFQAESTRTRIMFLSTFYTMRSDDFSSLCGPVLD 357
           AFAGK+TLKVPY+SKG GG K A+++F A STR+RIMF STFY MRSDDFSSLCGPV+D
Sbjct: 301 AFAGKDTLKVPYESKGTGGFKRASIRFVAVSTRSRIMFYSTFYAMRSDDFSSLCGPVID 359

[Close]

BLAST of CmaCh05G004040 vs. TAIR 10
Match: AT4G32460.1 (Protein of unknown function, DUF642 )

HSP 1 Score: 536.2 bits (1380), Expect = 3.1e-152
Identity = 255/356 (71.63%), Postives = 301/356 (84.55%), Query Frame = 0


Query: 1   MQNAAVIFLSVLLSAAFHPALSLVDGYLPNGDFERGPKASDMNGTVVKGPYAIPEWEISG 60
           M+   VI L +LL + F+ A    DG LPNGDFE GP+ SDM GT V    AIP WE+SG
Sbjct: 1   MKEMGVIVL-LLLHSFFYVAFCFNDGLLPNGDFELGPRHSDMKGTQVINITAIPNWELSG 60

Query: 61  FVEYIKSGQKQGDMLLVVPEGAFAVRLGNEASIKQKVKVVKGLYYSITFSAARTCAQEER 120
           FVEYI SG KQGDM+LVVP+GAFAVRLGNEASIKQK+ V KG YYSITFSAARTCAQ+ER
Sbjct: 61  FVEYIPSGHKQGDMILVVPKGAFAVRLGNEASIKQKISVKKGSYYSITFSAARTCAQDER 120

Query: 121 LNISVAPDWGVLPMQTLYNSNGWDLYAWAFQATSDEVAILIHNPGEEEDPACGPLIDAIA 180
           LN+SVAP   V+P+QT+Y+S+GWDLY+WAF+A SD   I+IHNPG EEDPACGPLID +A
Sbjct: 121 LNVSVAPHHAVMPIQTVYSSSGWDLYSWAFKAQSDYADIVIHNPGVEEDPACGPLIDGVA 180

Query: 181 IKTLYPPKASNDNLVKNGDFEVGPYVFPNASSGVLVPPNIEDDHSPIPGWMVESLKAVKY 240
           ++ L+PP+ +N N++KNG FE GP+V PN SSGVL+PPN  DDHSP+PGWMVESLKAVKY
Sbjct: 181 MRALFPPRPTNKNILKNGGFEEGPWVLPNISSGVLIPPNSIDDHSPLPGWMVESLKAVKY 240

Query: 241 IDSDHFSVPSGKRAVELVAGKESAIAQIVRTIPGKTYILSFVVGDASNSCEGSMVVEAFA 300
           IDSDHFSVP G+RAVELVAGKESA+AQ+VRTIPGKTY+LSF VGDASN+C GSM+VEAFA
Sbjct: 241 IDSDHFSVPQGRRAVELVAGKESAVAQVVRTIPGKTYVLSFSVGDASNACAGSMIVEAFA 300

Query: 301 GKNTLKVPYQSKGNGGSKPAALKFQAESTRTRIMFLSTFYTMRSDDFSSLCGPVLD 357
           GK+T+KVPY+SKG GG K ++L+F A S+RTR+MF STFY MR+DDFSSLCGPV+D
Sbjct: 301 GKDTIKVPYESKGKGGFKRSSLRFVAVSSRTRVMFYSTFYAMRNDDFSSLCGPVID 355

[Close]

BLAST of CmaCh05G004040 vs. TAIR 10
Match: AT4G32460.2 (Protein of unknown function, DUF642 )

HSP 1 Score: 536.2 bits (1380), Expect = 3.1e-152
Identity = 255/356 (71.63%), Postives = 301/356 (84.55%), Query Frame = 0


Query: 1   MQNAAVIFLSVLLSAAFHPALSLVDGYLPNGDFERGPKASDMNGTVVKGPYAIPEWEISG 60
           M+   VI L +LL + F+ A    DG LPNGDFE GP+ SDM GT V    AIP WE+SG
Sbjct: 1   MKEMGVIVL-LLLHSFFYVAFCFNDGLLPNGDFELGPRHSDMKGTQVINITAIPNWELSG 60

Query: 61  FVEYIKSGQKQGDMLLVVPEGAFAVRLGNEASIKQKVKVVKGLYYSITFSAARTCAQEER 120
           FVEYI SG KQGDM+LVVP+GAFAVRLGNEASIKQK+ V KG YYSITFSAARTCAQ+ER
Sbjct: 61  FVEYIPSGHKQGDMILVVPKGAFAVRLGNEASIKQKISVKKGSYYSITFSAARTCAQDER 120

Query: 121 LNISVAPDWGVLPMQTLYNSNGWDLYAWAFQATSDEVAILIHNPGEEEDPACGPLIDAIA 180
           LN+SVAP   V+P+QT+Y+S+GWDLY+WAF+A SD   I+IHNPG EEDPACGPLID +A
Sbjct: 121 LNVSVAPHHAVMPIQTVYSSSGWDLYSWAFKAQSDYADIVIHNPGVEEDPACGPLIDGVA 180

Query: 181 IKTLYPPKASNDNLVKNGDFEVGPYVFPNASSGVLVPPNIEDDHSPIPGWMVESLKAVKY 240
           ++ L+PP+ +N N++KNG FE GP+V PN SSGVL+PPN  DDHSP+PGWMVESLKAVKY
Sbjct: 181 MRALFPPRPTNKNILKNGGFEEGPWVLPNISSGVLIPPNSIDDHSPLPGWMVESLKAVKY 240

Query: 241 IDSDHFSVPSGKRAVELVAGKESAIAQIVRTIPGKTYILSFVVGDASNSCEGSMVVEAFA 300
           IDSDHFSVP G+RAVELVAGKESA+AQ+VRTIPGKTY+LSF VGDASN+C GSM+VEAFA
Sbjct: 241 IDSDHFSVPQGRRAVELVAGKESAVAQVVRTIPGKTYVLSFSVGDASNACAGSMIVEAFA 300

Query: 301 GKNTLKVPYQSKGNGGSKPAALKFQAESTRTRIMFLSTFYTMRSDDFSSLCGPVLD 357
           GK+T+KVPY+SKG GG K ++L+F A S+RTR+MF STFY MR+DDFSSLCGPV+D
Sbjct: 301 GKDTIKVPYESKGKGGFKRSSLRFVAVSSRTRVMFYSTFYAMRNDDFSSLCGPVID 355

[Close]

BLAST of CmaCh05G004040 vs. TAIR 10
Match: AT1G80240.1 (Protein of unknown function, DUF642 )

HSP 1 Score: 462.2 bits (1188), Expect = 5.7e-130
Identity = 223/355 (62.82%), Postives = 271/355 (76.34%), Query Frame = 0


Query: 2   QNAAVIFLSVLLSAAFHPALSLVDGYLPNGDFERGPKASDMNGTVVKGPYAIPEWEISGF 61
           Q AA++   + +S+    +  + DG LPNG+FE GPK S M G+VVK   A+P W I GF
Sbjct: 4   QEAALLLALLFISSNVVLSAPVRDGLLPNGNFELGPKPSQMKGSVVKERTAVPNWNIIGF 63

Query: 62  VEYIKSGQKQGDMLLVVPEGAFAVRLGNEASIKQKVKVVKGLYYSITFSAARTCAQEERL 121
           VE+IKSGQKQ DM+LVVP+G+ AVRLGNEASI QK+ V+ G  YSITFSAARTCAQ+ERL
Sbjct: 64  VEFIKSGQKQDDMVLVVPQGSSAVRLGNEASISQKISVLPGRLYSITFSAARTCAQDERL 123

Query: 122 NISVAPDWGVLPMQTLYNSNGWDLYAWAFQATSDEVAILIHNPGEEEDPACGPLIDAIAI 181
           NISV  + GV+P+QT+Y S+GWD Y+WAF+A   E+ I  HNPG EE PACGPLIDA+AI
Sbjct: 124 NISVTHESGVIPIQTMYGSDGWDSYSWAFKAGGPEIEIRFHNPGVEEHPACGPLIDAVAI 183

Query: 182 KTLYPPKASNDNLVKNGDFEVGPYVFPNASSGVLVPPNIEDDHSPIPGWMVESLKAVKYI 241
           K L+PP+ S  NL+KNG+FE GPYVFP A  GVL+PP IEDD+SP+PGWM+ESLKAVKY+
Sbjct: 184 KALFPPRFSGYNLIKNGNFEEGPYVFPTAKWGVLIPPFIEDDNSPLPGWMIESLKAVKYV 243

Query: 242 DSDHFSVPSGKRAVELVAGKESAIAQIVRTIPGKTYILSFVVGDASNSCEGSMVVEAFAG 301
           D  HF+VP G RA+ELV GKESAI+QIVRT   K Y L+F VGDA + CEG M+VEAFAG
Sbjct: 244 DKAHFAVPEGHRAIELVGGKESAISQIVRTSLNKFYALTFNVGDARDGCEGPMIVEAFAG 303

Query: 302 KNTLKVPYQSKGNGGSKPAALKFQAESTRTRIMFLSTFYTMRSDDFSSLCGPVLD 357
           +  + V Y SKG GG +   L F+A S RTR+ FLSTFY M+SD   SLCGPV+D
Sbjct: 304 QGKVMVDYASKGKGGFRRGRLVFKAVSARTRVTFLSTFYHMKSDHSGSLCGPVID 358

The following BLAST results are available for this feature:

BLAST of CmaCh05G004040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H156	2.1e-105	85.45	GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 S...	[more]
P41917	4.8e-105	85.45	GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 S...	[more]
P41916	6.2e-105	85.45	GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana OX=3702 GN=RAN1 PE=1 S...	[more]
P38546	1.4e-104	85.00	GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum OX=4081 GN=RAN1 PE=2 SV...	[more]
A2WSI7	1.8e-104	84.55	GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica OX=39946 GN=RAN1...	[more]

BLAST of CmaCh05G004040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11420.1	3.2e-157	73.03	Protein of unknown function, DUF642	[more]
AT5G25460.1	2.8e-153	71.03	Protein of unknown function, DUF642	[more]
AT4G32460.1	3.1e-152	71.63	Protein of unknown function, DUF642	[more]
AT4G32460.2	3.1e-152	71.63	Protein of unknown function, DUF642	[more]
AT1G80240.1	5.7e-130	62.82	Protein of unknown function, DUF642	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 486..504 score: 81.38 coord: 430..448 score: 89.88 coord: 383..397 score: 95.13 coord: 450..471 score: 86.19
IPR002041	Ran GTPase	PROSITE	PS51418	RAN	coord: 363..527 score: 29.927345
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 372..526 e-value: 1.1E-8 score: -7.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 371..527 e-value: 3.8E-49 score: 166.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 361..551 score: 9.810464
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 370..530 e-value: 2.4E-27 score: 106.9
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 375..550 e-value: 2.3E-135 score: 465.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 367..530 e-value: 3.5E-18 score: 76.4
None	No IPR available	GENE3D	2.60.120.260		coord: 188..348 e-value: 2.4E-10 score: 43.0
None	No IPR available	PANTHER	PTHR31265	OS02G0527500 PROTEIN-RELATED	coord: 7..357
None	No IPR available	PANTHER	PTHR31265:SF48	PLANT/F18G18-200 PROTEIN	coord: 7..357
None	No IPR available	PROSITE	PS51419	RAB	coord: 364..551 score: 19.785553
None	No IPR available	CDD	cd00877	Ran	coord: 370..529 e-value: 1.13345E-126 score: 365.856
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 360..549 e-value: 5.3E-62 score: 210.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 370..531
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 370..520 e-value: 1.2E-23 score: 81.7
IPR006946	Domain of unknown function DUF642	PFAM	PF04862	DUF642	coord: 193..357 e-value: 5.7E-18 score: 65.2 coord: 26..182 e-value: 6.0E-70 score: 234.1
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 26..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G004040.1	CmaCh05G004040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0005750	mitochondrial respiratory chain complex III
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding