CmaCh05G003190 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCGCTCCAAAGAAGTCTTCTTCGTTCTCCGCTAGGGTTTTCATCGCAATACTGTCTCTTCTGTTTTTCTCAAATCTGAACTTCTTTTCTCCTTTTTCTTTCAAATCTTCGCCGAACCCTCCCCATAATAGACACAGATGTCTCGTTGTTTTCCTTACCCACCTCCTGGTTACGTGAGGAAGGTGGCTAGGACCGAGGCGGCCTTGATCGAATCGATTAAGGTTTGTTTGAGCTATTTGGTTGGTTTTGATAATGTATGCTGAATTCAATTGTGTTCGGATTCCAATTGATTGCGAAATCTTCTTGGAATTTTAACTTTTTGGATAGGGGTGTATCTATAATCAGGAACGGCTTTTTTTCCCTTTAGTTTTTGCGACGATGGGGGAAGAATGGATTTGGGTTCTCTTGTTGCGATGTGCGAGATTTTATGTACCCTAATAATTGGATTCTGATTTTGGATTATTTGGAGTTCAGTGTGTGTAGATGGTGGTTTGGGCTTCTTATAGTTGCATGTCGTACAACTCGTTCTTAGATCTTGTATGGATGTTCAGTCTTTGGATCTCGTCATGGTTTTCTAAATGTCCTTGAACTCCGTTCCTTTTGCTTTCAAATGGATTGTTCTCTACAATTTTAAAAGGAAGATATTTAGGGTTTCCCGTAAGCTAATTAACATGAACCCTTTTTCGGGAATTTTTCGCACAACCTTCTTTTCCACGATATCCTTAGCCATTTTAATACACGATGTGAATGTACGTATTTGCTACTACAAATTTATGATTATCTGTGTCCAGATGAAATACTCCTTTACTATAGGAATATCTACCCTTTTGAAGGGTTGCATTTTATTAGTAAGGCATGGTTGACATGTTTGCTGCTTGCGTCGTCTACTCTGTTTTAAATGGTTATTCTGGTGCGTTATAGCTCCAATCTGAAAGACGACAGCACAAGACTGATAGCAAGAAAGAGAAAAGTAAGCACAAGAAAGAAAAGAGCAAGGACAGGAAACACAAAAGCAATGAACGTAAGGAAAGTAAGGAAAAATCTTCTCGTAGCCGTGACTTGAATGATCAGAAACATAAGGTATGTGTAAAAGAGGCCAAGGATCGTCTAGAGGGAACCAAGGTTGAAGCAGAACAATTAGAAAAGAGTGGTCTCACTGAAGAGCATGGACAACCAGTATGGCCTCATAGTCCTGGCTACTTGTCTGATGGAACTCAGATCAACCATAAGAGGAAACGGGATGATTCATTACAGCCTGATGAAGGTTGTAAACCTGGTGTGTTCTCTTTATAGATAATAGTCTCACTTATGAAATAAATTCTCTTGGCCACATGAACAAACTCTAATATGCTATTGATTTCAAACAGGAAAAGTAATTCGGATCAAACTGGCTTCTTCACTAAGCCAGCAAGAGAATTCATCAGCTGGCTGTGAACTGACGTGTTCTGTATCTGGTCGTGATATTTCTCGTGATCAAAAGAGTGATGAAAACAGCTCAGTTGTTCGGCGATCAACTTGCTTTGCCAATTCTGAAACGGCCCGTGCTGTCAAGGATTGCACATCTTCTAAACCTAAGATCAAAGACCCTCCTCCGCATGCTGTCAAGGATCGCACTTCTTCTAAACCTAAGATCAAAGACCCTTCTCCGCATGCTGTCAAGGAAATTAGCTCACTAGGTAATGTTATGTCATTACCACGCACCAGAAGCCCTGTCGAATCTGCTTATGAGGCCTTGTTTGAGAAGTGGGTACCACCTCCACTTCAGTTGGAGCAACAAATGGATGATGAAGAATGGCTCTTCCCAACCGAAAAGCAAGATGGACGAAGTACAAAGACCAATGAAGCTTTCAGTTCTATTCCCAGCTGTAGAAATTCCAGTCTGTGGCCGAGAGGACAATATCTTGCCGTTGCCGATGTTTATTCATTGCCTTACACGATCCCATATTGA CCGCTCCAAAGAAGTCTTCTTCGTTCTCCGCTAGGGTTTTCATCGCAATACTGTCTCTTCTGTTTTTCTCAAATCTGAACTTCTTTTCTCCTTTTTCTTTCAAATCTTCGCCGAACCCTCCCCATAATAGACACAGATGTCTCGTTGTTTTCCTTACCCACCTCCTGGTTACGTGAGGAAGGTGGCTAGGACCGAGGCGGCCTTGATCGAATCGATTAAGCTCCAATCTGAAAGACGACAGCACAAGACTGATAGCAAGAAAGAGAAAAGTAAGCACAAGAAAGAAAAGAGCAAGGACAGGAAACACAAAAGCAATGAACGTAAGGAAAGTAAGGAAAAATCTTCTCGTAGCCGTGACTTGAATGATCAGAAACATAAGGTATGTGTAAAAGAGGCCAAGGATCGTCTAGAGGGAACCAAGGTTGAAGCAGAACAATTAGAAAAGAGTGGTCTCACTGAAGAGCATGGACAACCAGTATGGCCTCATAGTCCTGGCTACTTGTCTGATGGAACTCAGATCAACCATAAGAGGAAACGGGATGATTCATTACAGCCTGATGAAGGTTGTAAACCTGGAAAAGTAATTCGGATCAAACTGGCTTCTTCACTAAGCCAGCAAGAGAATTCATCAGCTGGCTGTGAACTGACGTGTTCTGTATCTGGTCGTGATATTTCTCGTGATCAAAAGAGTGATGAAAACAGCTCAGTTGTTCGGCGATCAACTTGCTTTGCCAATTCTGAAACGGCCCGTGCTGTCAAGGATTGCACATCTTCTAAACCTAAGATCAAAGACCCTCCTCCGCATGCTGTCAAGGATCGCACTTCTTCTAAACCTAAGATCAAAGACCCTTCTCCGCATGCTGTCAAGGAAATTAGCTCACTAGGTAATGTTATGTCATTACCACGCACCAGAAGCCCTGTCGAATCTGCTTATGAGGCCTTGTTTGAGAAGTGGGTACCACCTCCACTTCAGTTGGAGCAACAAATGGATGATGAAGAATGGCTCTTCCCAACCGAAAAGCAAGATGGACGAAGTACAAAGACCAATGAAGCTTTCAGTTCTATTCCCAGCTGTAGAAATTCCAGTCTGTGGCCGAGAGGACAATATCTTGCCGTTGCCGATGTTTATTCATTGCCTTACACGATCCCATATTGA ATGTCTCGTTGTTTTCCTTACCCACCTCCTGGTTACGTGAGGAAGGTGGCTAGGACCGAGGCGGCCTTGATCGAATCGATTAAGCTCCAATCTGAAAGACGACAGCACAAGACTGATAGCAAGAAAGAGAAAAGTAAGCACAAGAAAGAAAAGAGCAAGGACAGGAAACACAAAAGCAATGAACGTAAGGAAAGTAAGGAAAAATCTTCTCGTAGCCGTGACTTGAATGATCAGAAACATAAGGTATGTGTAAAAGAGGCCAAGGATCGTCTAGAGGGAACCAAGGTTGAAGCAGAACAATTAGAAAAGAGTGGTCTCACTGAAGAGCATGGACAACCAGTATGGCCTCATAGTCCTGGCTACTTGTCTGATGGAACTCAGATCAACCATAAGAGGAAACGGGATGATTCATTACAGCCTGATGAAGGTTGTAAACCTGGAAAAGTAATTCGGATCAAACTGGCTTCTTCACTAAGCCAGCAAGAGAATTCATCAGCTGGCTGTGAACTGACGTGTTCTGTATCTGGTCGTGATATTTCTCGTGATCAAAAGAGTGATGAAAACAGCTCAGTTGTTCGGCGATCAACTTGCTTTGCCAATTCTGAAACGGCCCGTGCTGTCAAGGATTGCACATCTTCTAAACCTAAGATCAAAGACCCTCCTCCGCATGCTGTCAAGGATCGCACTTCTTCTAAACCTAAGATCAAAGACCCTTCTCCGCATGCTGTCAAGGAAATTAGCTCACTAGGTAATGTTATGTCATTACCACGCACCAGAAGCCCTGTCGAATCTGCTTATGAGGCCTTGTTTGAGAAGTGGGTACCACCTCCACTTCAGTTGGAGCAACAAATGGATGATGAAGAATGGCTCTTCCCAACCGAAAAGCAAGATGGACGAAGTACAAAGACCAATGAAGCTTTCAGTTCTATTCCCAGCTGTAGAAATTCCAGTCTGTGGCCGAGAGGACAATATCTTGCCGTTGCCGATGTTTATTCATTGCCTTACACGATCCCATATTGA MSRCFPYPPPGYVRKVARTEAALIESIKLQSERRQHKTDSKKEKSKHKKEKSKDRKHKSNERKESKEKSSRSRDLNDQKHKVCVKEAKDRLEGTKVEAEQLEKSGLTEEHGQPVWPHSPGYLSDGTQINHKRKRDDSLQPDEGCKPGKVIRIKLASSLSQQENSSAGCELTCSVSGRDISRDQKSDENSSVVRRSTCFANSETARAVKDCTSSKPKIKDPPPHAVKDRTSSKPKIKDPSPHAVKEISSLGNVMSLPRTRSPVESAYEALFEKWVPPPLQLEQQMDDEEWLFPTEKQDGRSTKTNEAFSSIPSCRNSSLWPRGQYLAVADVYSLPYTIPY Homology
BLAST of CmaCh05G003190 vs. TAIR 10
Match: AT1G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75860.1); Has 471 Blast hits to 438 proteins in 92 species: Archae - 0; Bacteria - 14; Metazoa - 217; Fungi - 43; Plants - 91; Viruses - 1; Other Eukaryotes - 105 (source: NCBI BLink). ) HSP 1 Score: 73.6 bits (179), Expect = 3.5e-13 Identity = 107/351 (30.48%), Postives = 159/351 (45.30%), Query Frame = 0
BLAST of CmaCh05G003190 vs. TAIR 10
Match: AT1G75860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20100.1); Has 258 Blast hits to 235 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 16; Plants - 90; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). ) HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12 Identity = 99/349 (28.37%), Postives = 147/349 (42.12%), Query Frame = 0
BLAST of CmaCh05G003190 vs. TAIR 10
Match: AT4G35940.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17787.1). ) HSP 1 Score: 53.1 bits (126), Expect = 4.9e-07 Identity = 106/409 (25.92%), Postives = 160/409 (39.12%), Query Frame = 0
BLAST of CmaCh05G003190 vs. TAIR 10
Match: AT1G20100.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 1.6e-05 Identity = 68/202 (33.66%), Postives = 98/202 (48.51%), Query Frame = 0
BLAST of CmaCh05G003190 vs. TAIR 10
Match: AT2G17787.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35940.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 3.5e-05 Identity = 101/366 (27.60%), Postives = 145/366 (39.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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