CmaCh05G001390 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G001390
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	F-box/kelch-repeat protein
Location	Cma_Chr05: 609753 .. 622561 (+)
RNA-Seq Expression	CmaCh05G001390
Synteny	CmaCh05G001390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTCTATGGTGTGACAGAGAAGAGAGGAGGCAGAAGTAAGCAATTTCTGCCTTTGTTTAATTGTACAAACGAAAGGGGAATAATTGACCATGTATTCACTATGTATAAACAATAGTTTCCCCTCCCATTTGAATCCAAAGGGGAATATATATAGTACTTAAATATATTACTTGCGACAGAAAGGGCTCTACAACTGCAACCGAGCTCAAATTTTGAGCCAATGTCACGCCGAGAATATAGGAGCTCTTGACTTTGCCATGAACCTCAGAGTTGCCTCAAATATAGCATAGCAAGCAGTATCAGACAAAGAGCTCCCTTATTTTTGGTTTGAAGCAAGCTAAAATGAGAGAGATGAGGACGTTATAGCCATAATCGATATTGTCAGTTTTGATTATGTGTAGTTGTCAGTCTCATAATGAGATAGAAGTTTACACACTTTTAATAACCTAATAAATACTCTCAATTCAATTAATTAAATATATTACTTTTTTTTTTTTGCAATATTATTGCTAGCCTACCACCTTAAACCAAATCGTTTAGTGGGTTTAAAATGACTTTGCGATGGATAAAAATATACTGTCTAACAAAATTTAGAAACTATTTAAAATATTAAAATACCTTGTTCAAATCTAGTAATTAATGATTTAAAAAAATATATATATTAAAATATCTCAAGAAGCTAATTGTTATAGATATTTATGGTATTTCTGTCCAACGTTTTTTACAAAGTTGATAAGATTGTAAAGATGCCGTTATCTTTGAGCTCCAGTTCGCTACGACGTGGGCCCGGATTACAAGTATAAAGGCAGCGCCATTGTGCCGCTTCGTCATCTTCATACCTCCGTTTCCGTAACTGCGTTTTTCAGGATTTCGGATATGAAAATGAGAGAAAAATCCAGAAGCGTTAAATATTTCTCCAAGTTCAGTGGATTCACCGTCGCCGCTGCCAAGCCGAAATACATTATTTCTGTTAGAATTGGTCAATCCATTAGAATAGCTTGAAGTTAGTCATGCCATAAGAATAGGCTTACTTCGTTAGTTTCCTATGAAATCGGATCTATTAGTTAATCTTTTGCCAATATAAATAGAATATGTCCTCAATAGTGTGAGGCACAGTTTTGCATAAACTTGATATGGTATCAGAGCAGAAATAAGATCCACGAGATCCATAGCCTCTGCTGTTAAACATGTCAATCCCAATCAACACAATGTCTTCTCCGTCGATCAGTCAGGTGATTAGTGTTAAGCTTACACAAGAAAATTATCTACTGTGGTCTACCCAAATCCTTCCCTACTTGCGTAGCCAAAACCTTGTTGGTTTTGTGGATGGATCCATGCCTGCACCAAGCCAGACGATCGCCGTTGAACCAAGTGAAGAAACAGGGAATCGCAAAATTATCATCAACCCTGAGTTCACAGTCTGGTACCCCCAGGACCAGCTGGTACTCAGCCTCATCAACTCATCAGTCACTGAGGAGGTTCTCAGCACGATGGTTGGAATCACCACTGCACGAGAAGCCTGGATTACGCTGGAGCGACAATTTGCTTCCACATCTCGAGCAAGAGCAATGCAGATCCGTATGGAACTCTCTACTATCCAGAAAAAGGACATGACAATTGCTGACTACTTTCGTAAAGTAAAACATCTTGGTGATACACTTGCTGCCATTGGCAAGCGAATAGAGGATGAAGAACTCATCGCCTACATGCTGCAAGGACTTGGTCCAGATTATGATCCTCTAGTCACAAGCATTACAACCAGAACAGATGTATACACTGTCAGCGACGTGTATGCTCACATGCTGAGCTATGAGATGCGGCACTTGCGTAAGGGTACATTTGAGCAACTTTCATCTGCTAACAATGTCAATAGGATATCCATTCGTGGAGGTGCCAATGGAGGTCGAGGTAGTCGCGGTCGTAGTCGTCAGTTAAATAGTGGTCATGGACAATCAAGGCGTACTGTGAACAATCCTGGACGTCAACCATCAAAGACACAAAGCAGCTCAGGCATTGTCTGTCAGATTTGTGGTAAGCCCAATCACGATGCTTTGCAATGCTGGCACAGATTTGATCAGGCATATCAAGCCGAAAATAATCTCAAACAAGCAGCTTTGGCAACTAGTGGATACACTAGTGACACAAACTGGTATGTTGACACTGGAGCCACAGATCATATCACCAATGACCTAGAGAGGCTTACCACCAGAGAACGCTACACTGGCACCGACCAAATTCAGGTTGCAAATGGCGCAGGTTTGTCTATCTCTCATATTGGGAATTCATTAATTTCTGGTTCATCTCTTGTTCTGAAACATATCCTATATGCTCCTAAAATCAATAAGCACCTAATTTCAGTACAAAGACTAGCATCTGATAATAATGCTGTTGTAGAATTTCACCCAAACTATTTTTTGGTTAAGGACCGAGTCACGAAGAAACTCCTGCTCCACGGTAGATGTAAGAATGGCCTATACGTTCTACCGCATAATTTCAGTCAAGCCTTGCTGACAGCCAAACTTTCGAAAGAACAATGGCACAGAAGGCTAGGGCACCCTGCATCTCCAATTACCATTAGAATTCTACAAGATAATAATTTAGCTATAGATACTAATATTCCCTCTTCCTCAATTTGTAATGCTTGTCAATTAGGGAAAGCACATCAATTGCCATTTGGTTCTTCTCAGCATGTATCTACAGCACCCCTTCAATTAATTCACACTGATGTATGGGGTCCATCCATTGCGTCAGTAAATAATTCCAAATATTATGTTTCCTTTGTTGATGATTTTAGTCGTTATGTTTGGATTTACTTTCTGAGATGCAAATCTGATGTTGAGTCTGTGTTCCTTCAATTTCAAAAACATGTTGAAACTATGCTAAATACCAAAATTCGCTCCGTCCAATCAGATTGGGGGGGTGAATACCATCGGTTACACAATTATTTCAAATCCACAGGCATTGAACATCATATCTCCTGTCCTCACACACACCAGCAGAATGGGTTAGTCGAAAGAAAACACAGACACATTGTAGAAACTGGCCTTGCTTTACTCGCTCAAGCCAACATGCCTCTATCCTACTGGGATGAAGCTTTCAACACAGCTTGCTTTCTTATAAATAGAATGCCCAGCCGAACCATACAACAAGACACACCACTTCATAAATTGTTTGGTAAAAGTCCAGACTACTCCATGCTTAGGGTGTTTGGCTGTGCTTGCTGGCCTAATTTAAGGCCTTACAACAACAAGAAACTGAGTTTCAGAACTACTAGATGTATATTCTTGGGTTATAGTTCTTCTCATAAGGGATATAAATGCTTAAATAGAAGTACAGGACGTATTTACATCTCTAGAGACGTGGTTTTCGATGAAAATATTTTTCCTTTTGAAGAATCTAAGCCACCAAACAAAACCACAAATCCACATCATCCTGTTCTACTTCCAGCCTTAGCCAAACTTGCTAGTTTTTACACTGAAAATGCTCTTACAGATATTGAACCAGTTGTTAGTAATTCCCATATGAATGATGGTCAAACTGATAATATTGCTAGTGACAACTTGTCTGGTGTCAGCTTATCTTCTGCAGATAATACAAGAAGTTCAGAGGAAATTGCAGAATATGAAGCTGAGAGCAGTTCGATCAATGCTCAAAACCAAACTCATGAACATGTGTCTGATCAACCAACTGAAGCAGCTAGTCAACATCCAATGCGAACAAGGTTGAGAAATAACATTGTACAAGCTAAACAATTCACTGATGGAACTATCAGATATTCAGAAACCTCAAGAAAATTCGCAAGCGCTGTAACTATCACAACTCCGATCATAGAGACTGCTACTGAACCTCGAAACCTGCAGGAAGCCATGCAACATCCAAGATGGAGAGGAGCAATGAATGATGAGCTCTCAGCGCTAAAACGAAATGCCACTTGGGATCTAGTTCCACCCAAACCTGGAATAAATCTCATTGATAGTAAATGGGTGTATAAAGTGAAAAGAAAAGCAGATGGGTCAGTTGAAAGATTAAAAGCAAGATTAGTTGCCAAAGGATTCAAGCAAAGATTTGGTGTTGATTACACTGATACTTTTAGCCCTGTGATCAAACCGTCAACAATCAGGGTCATTCTTTCGCTAGCAGTAACCAAGGGCTGGAATAGGAGACAAGTTGATATCCAAAATGCATTTTTGCATGGAATTCTGAAAGAGGAAGTGTACATGCGACAACCACCAGGATTTCAAGACTCAGCCAAACCAAAGAATTACATATGCAAGCTCAAGAAAGCCCTTTATGGCCTGAAACAAGCCCCAAAAGCTTGGCATTCAAGGTTGACTGGAAAACTTATTGAGTTAGGCTTCAAGGCTTCAGTAGCTGATTCATCTCTTTTTATTCTCAAAAACAGAGAGATAACTATCTATATGCTCATCTATGTTGATGATATAATTATTGTGAGCTCCTCTGATCAAGCAACCGAAAGGTTGATTCAGAAATTGAAAATAGATTTTGCAGTAAAAGATTTGGGTGATCTTGAGTATTTTCTGGGTATTGAAGTCAAGAAAACACGAGATGGTATCATACTGTCACAGAGACGATATGCTTTAGATTTGTTGAAAAGAGTAAACATGGAAAAATGCAAACCTATGTCTACACCAATGGGTTCTGCTGAAAAATTATTCAGAGAACAAGGAATACCCTTATCAGCTGAAGAACAATTCAAATACAGAAGTACAGTGGGAGCACTACAATATTTGACAATGACTAGGCCTGATTTGGCATTTGCTGTCAATAAAGTGTGTCAATATCTTCATACACCTACTGATGCTCATTGGGGTGCTGTGAAGAGAATTCTTCGTTATGTTAAAGGCACACTAGCATTAGGAGTGAAAATTCAGAAATCAACCATGATGTTGTCGGGGTTTTCTGATGCTGATTGGGCTGGTTGTCCCGATGATCGACGTTCAACTAGCGGCTTTGCTGTATTTCTTGGAGCAAATCTAATCTCATGGAGTTCCAGAAAACAGGCTACAGTGTCAAGATCAAGCACCGAAGCAGAATACAAGGCCATTGCGAATCTTACTGCAGAAATGATTTGGATCAAGTCATTACTGAAGGAACTGGGCGTGTATCAATCAAAGGCTCCTCGCCTCTGGTGTGACAACCTCGGAGCTACATATTTAACTTCAAATCCAGTATTTCATGCTAGAACGAAACATATTGAAGTTGATTTTCATTTTGTTCGAGAACAAGTAGCACGTAAAGCAATGGAAGTTCGGTTCATTTCATCAAGTGATCAAGTAGCTGATATCCTGACAAAACCACTGTCTAAAACTCCTTTTACTACACATTGTAACAATCTCAACATGTACAAGACTTGTTGGGATTGAAGGGGACTGTTAGAATTGGTCAATCCATTAGAATAGCTTGAAGTTAGTCATGCCATAAGAATAGGCTTACTTCGTTAGTTTCCTATGAAATCGGATCTATTAGTTAATCTTTTGCCAATATAAATAGAATATGTCCTCAATAGTGTGAGGTACAGTTTTGCATAAACTTGATATGTTAGAATTGGTCAATCCATTAGAATAGCTTGAAGTTAGTCATGCCATAAGAATAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATATAAATAGAATATGTCCTCAATAGTGTGAGGTACAGTTTTGCATAAACTTGATATGTTAGAATTGGTCAATCCATTAGAATAGCTTGAAGTTAGTCATGCCATAAGAATAGGCTTACTTCGTTAGTTTCCTATGAAATCGGATCTATTAGTTAATCTTTTGCCAATATAAATAGAATATGTCCTCAATAGTGTGAGGTACAGTTTTGCATAAACTTGATATGTTAGAATTGGTCAATCCATTAGAATAGCTTGAAGTTAGTCATGCCATAAGAATAGGCTTACTTCGTTAGTTTCCTATGAAATCGGATCTATTAGTTAATCTTTTGCCAATATAAATAGAATATGTCCTCAATAGTGTGAGGCACAGTTTTGCATAAACTTGATATGGTATCAGAGCAGAAATAAGATCCACGAGATCCATAGCCTCTGCTGTTAAACATGTCAATCCCAACAAACACAATGTCTTCTCCGTCGATCAGTCAGGTGATTAGTGTTAAGCTTACACAAGAAAATTATCTACTGTGGTCTACCCAAATCCTTCCCTACTTGCGTAGCCAAAACCTTGTTGGTTTTGTGGATGGATCCATGCCTGCACCAAGCCAGACGATCGCCGTTGAACCAAGTGAAGAAACAGGGAATCGCAAAATTATCATCAACCCTGAGTTCACAGTCTGGTACCCCCAGGACCAGCTGGTACTCAGCCTCATCAACTCATCAGTCACTGAGGAGGTTCTCAGCACGATGGTTGGAATCACCACTGCACGAGAAGCCTGGATTACGCTGGAGCGACAATTTGCTTCCACATCTCGAGCAAGAGCAATGCAGATCCGTATGGAACTCTCTACTATCCAGAAAAAGGACATGACAATTGCTGACTACTTTCGTAAAGTAAAACATCTTGGTGATACACTTGCTGCCATTGGCAAGCGAATAGAGGATGAAGAACTCATCGCCTACATGCTGCAAGGACTTGGTCCAGATTATGATCCTCTAGTCACAAGCATTACAACCAGAACAGATGTATACACTGTCAGCGACGTGTATGCTCACATGCTGAGCTATGAGATGCGGCACTTGCGTAAGGGTACATTTGAGCAACTTTCATCTGCTAACAATGTCAATAGGATATCCATTCGTGGAGGTGCCAATGGAGGTCGAGGTAGTCGCGGTCGTAGTCGTCAGTTAAATAGTGGTCATGGACAATCAAGGCGTACTGTGAACAATCCTGGACGTCAACCATCAAAGACACAAAGCAGCTCAGGCATTGTCTGTCAGATTTGTGGTAAGCCCAATCACGATGCTTTGCAATGCTGGCACAGATTTGATCAGGCATATCAAGCCGAAAATAATCTCAAACAAGCAGCTTTGGCAACTAGTGGATACACTAGTGACACAAACTGGTATGTTGACACTGGAGCCACAGATCATATCACCAATGACCTAGAGAGGCTTACCACCAGAGAACGCTACACTGGCACCGACCAAATTCAGGTTGCAAATGGCGCAGGTTTGTCTATCTCTCATATTGGGAATTCATTAATTTCTGGTTCATCTCTTGTTCTGAAACATATCCTATATGCTCCTAAAATCAATAAGCACCTAATTTCAGTACAAAGACTAGCATCTGATAATAATGCTGTTGTAGAATTTCACCCAAACTATTTTTTGGTTAAGGACCGAGTCACGAAGAAACTCCTGCTCCACGGTAGATGTAAGAATGGCCTATACGTTCTACCGCATAATTTCAGTCAAGCCTTGCTGACAGCCAAACTTTCGAAAGAACAATGGCACAGAAGGCTAGGGCACCCTGCATCTCCAATTACCATTAGAATTCTACAAGATAATAATTTAGCTATAGATACTAATATTCCCTCTTCCTCAATTTGTAATGCTTGTCAATTAGGGAAAGCACATCAATTGCCATTTGGTTCTTCTCAGCATGTATCTACAGCACCCCTTCAATTAATTCACACTGATGTATGGGGTCCATCCATTGCGTCAGTAAATAATTCCAAATATTATGTTTCCTTTGTTGATGATTTTAGTCGTTATGTTTGGATTTACTTTCTGAGATGCAAATCTGATGTTGAGTCTGTGTTCCTTCAATTTCAAAAACATGTTGAAACTATGCTAAATACCAAAATTCGCTCCGTCCAATCAGATTGGGGGGGTGAATACCATCGGTTACACAATTATTTCAAATCCACAGGCATTGAACATCATATCTCCTGTCCTCACACACACCAGCAGAATGGGTTAGTCGAAAGAAAACACAGACACATTGTAGAAACTGGCCTTGCTTTACTCGCTCAAGCCAACATGCCTCTATCCTACTGGGATGAAGCTTTCAACACAGCTTGCTTTCTTATAAATAGAATGCCCAGCCGAACCATACAACAAGACACACCACTTCATAAATTGTTTGGTAAAAGTCCAGACTACTCCATGCTTAGGGTGTTTGGCTGTGCTTGCTGGCCTAATTTAAGGCCTTACAACAACAAGAAACTGAGTTTCAGAACTACTAGATGTATATTCTTGGGTTATAGTTCTTCTCATAAGGGATATAAATGCTTAAATAGAAGTACAGGACGTATTTACATCTCTAGAGACGTGGTTTTCGATGAAAATATTTTTCCTTTTGAAGAATCTAAGCCACCAAACAAAACCACAAATCCACATCATCCTGTTCTACTTCCAGCCTTAGCCAAACTTGCTAGTTTTTACACTGAAAATGCTCTTACAGATATTGAACCAGTTGTTAGTAATTCCCATATGAATGATGGTCAAACTGATAATATTGCTAGTGACAACTTGTCTGGTGTCAGCTTATCTTCTGCAGATAATACAAGAAGTTCAGAGGAAATTGCAGAATATGAAGCTGAGAGCAGTTCGATCAATGCTCAAAACCAAACTCATGAACATGTGTCTGATCAACCAACTGAAGCAGCTAGTCAACATCCAATGCGAACAAGGTTGAGAAATAACATTGTACAAGCTAAACAATTCACTGATGGAACTATCAGATATTCAGAAACCTCAAGAAAATTCGCAAGCGCTGTAACTATCACAACTCCGATCATAGAGACTGCTACTGAACCTCGAAACCTGCAGGAAGCCATGCAACATCCAAGATGGAGAGGAGCAATGAATGATGAGCTCTCAGCGCTAAAACGAAATGCCACTTGGGATCTAGTTCCACCCAAACCTGGAATAAATCTCATTGATAGTAAATGGGTGTATAAAGTGAAAAGAAAAGCAGATGGGTCAGTTGAAAGATTAAAAGCAAGATTAGTTGCCAAAGGATTCAAGCAAAGATTTGGTGTTGATTACACTGATACTTTTAGCCCTGTGATCAAACCGTCAACAATCAGGGTCATTCTTTCGCTAGCAGTAACCAAGGGCTGGAATATGAGACAAGTTGATATCCAAAATGCATTTTTGCATGGAATTCTGAAAGAGGAAGTGTACATGCGACAACCACCAGGATTTCAAGACTCAGCCAAACCAAAGAATTACATATGCAAGCTCAAGAAAGCCCTTTATGGCCTGAAACAAGCCCCAAAAGCTTGGCATTCAAGGTTGACTGGAAAACTTATTGAGTTAGGCTTCAAGGCTTCAGTAGCTGATTCATCTCTTTTTATTCTCAAAAACAGAGAGATAACTATCTATATGCTCATCTATGTTGATGATATAATTATTGTGAGCTCCTCTGATCAAGCAACCGAAAGGTTGATTCAGAAATTGAAAATAGATTTTGCAGTAAAAGATTTGGGTGATCTTGAGTATTTTCTGGGTATTGAAGTCAAGAAAACACGAGATGGTATCATACTGTCACAGAGACGATATGCTTTAGATTTGTTGAAAAGAGTAAACATGGAAAAATGCAAACCTATGTCTACACCAATGGGTTCTGCTGAAAAATTATTCAGAGAACAAGGAATACCCTTATCAGCTGAAGAACAATTCAAATACAGAAGTACAGTGGGAGCACTACAATATTTGACAATGACTAGGCCTGATTTGGCATTTGCTGTCAATAAAGTGTGTCAATATCTTCATACACCTACTGATGCTCATTGGGGTGCTGTGAAGAGAATTCTTCGTTATGTTAAAGGCACACTAGCATTAGGAGTGAAAATTCAGAAATCAACCATGATGTTGTCGGGGTTTTCTGATGCTGATTGGGCTGGTTGTCCCGATGATCGACGTTCAACTAGCGGCTTTGCTGTATTTCTTGGAGCAAATCTAATCTCATGGAGTTCCAGAAAACAGGCTACAGTGTCAAGATCAAGCACCGAAGCAGAATACAAGGCCATTGCGAATCTTACTGCAGAAATGATTTGGATCAAGTCATTACTGAAGGAACTGGGCGTGTATCAATCAAAGGCTCCTCGCCTCTGGTGTGACAACCTCGGAGCTACATATTTAACTTCAAATCCAGTATTTCATGCTAGAACGAAACATATTGAAGTTGATTTTCATTTTGTTCGAGAACAAGTAGCACGTAAAGCAATGGAAGTTCGGTTCATTTCATCAAGTGATCAAGTAGCTGATATCCTGACAAAACCACTGTCTAAAACTCCTTTTACTACACATTGTAACAATCTCAACATGTACAAGACTTGTTGGGATTGAAGGGGACTGTTAGAATTGGTCAATCCATTAGAATAGCTTGAAGTTAGTCATGCCATAAGAATAGGCTTACTTCGTTAGTTTCCTATGAAATCGGATCTATTAGTTAATCTTTTGCCAATATAAATAGAATATGTCCTCAATAGTGTGAGGCACAGTTTTGCATAAACTTGATAGAGCCGACTACCTCCTGAACTCCTCGATCACGTACTCTCTTTTCTCCCTCTCAGAACCTATTTCAACCTGAGATCGACTTGCAAGCGTTTCGATTCCCTCTTGTATTCTCCTTGTTTCGTCTCTAAGCATTCCGATTCGTCTCTCTCTTCCTTCCTCTTGCTGGCGCATCCTCATTGTTTCAGTCAGTTTCCTCTCTACGACTCTGCTCTCGGCACTTGGCGGAGCTTACCGCTCACTCTTTCCGTTCCGCTTCTATCCGCTACTCCTTCTACTGCTCTTCTTTCCATAGCTGACGGCCTCGTTTGTTTCTCTCTTCGCAATTCCTGCTCCTTCGTTGTCTGCAATTTCTTGACTAAATCGTCGAGACTGATCGAGTTTCCGTATCATCCATTCAGATTCGAGCTGCTCACGTTGGTGTCCGTACCCCTAGGGTACAAGATTTTCACGCTCTTGACTGATTCGGCTTTGGTTTTCGATTCCAGGGATCACTCGTGGCGAAAATTCAACAATTTCGAGGCGATTCTCGGGGATAATCATCGCCAAGAAGCTGCGTGCTATAACGGCCATTTGTATTTTGTTACGCCAAAACCATTTTCTATTGTTTCCTTCGATTTGGATAGTGGCGAGTGGGAGGTAACCGATACTATAATGCCTGAGGAGATGACGTTTGTTAGATTAGTGAGCGATGGAGATAGGAAACTGTACATGATCGGTGGAACAGGGAGGAATGGGATCTCGAGGAGGCTGAGATTATGGGAGTTCTCGGAAGAGGGGAATTGGGTGGAAGTTGAAAGTGTGCCACAGATGTTTTGCAAGAAGTTCATGTCGATTTGCTACCACAATTACGAGCATGTGTATTGCTTTTGGCATCAAGGAACCATCTGTGTTTGTTGCTACACTTGGCCGGAGATTTTGTATTACAAATTTTGCAGGAGATCATGGCATTGGCTTCCCAAATGCCCTTCTCTACCGGAGAGATGGAGCTGTGGTTTCAGGTGGTTCTCTTTTGTGCCACAGTTGTACGCATCTGCCTGA

mRNA sequence

ATGCGTCTATGGTGTGACAGAGAAGAGAGGAGGCAGAAAACCTATTTCAACCTGAGATCGACTTGCAAGCGTTTCGATTCCCTCTTGTATTCTCCTTGTTTCGTCTCTAAGCATTCCGATTCGTCTCTCTCTTCCTTCCTCTTGCTGGCGCATCCTCATTGTTTCAGTCAGTTTCCTCTCTACGACTCTGCTCTCGGCACTTGGCGGAGCTTACCGCTCACTCTTTCCGTTCCGCTTCTATCCGCTACTCCTTCTACTGCTCTTCTTTCCATAGCTGACGGCCTCGTTTGTTTCTCTCTTCGCAATTCCTGCTCCTTCGTTGTCTGCAATTTCTTGACTAAATCGTCGAGACTGATCGAGTTTCCGTATCATCCATTCAGATTCGAGCTGCTCACGTTGGTGTCCGTACCCCTAGGGTACAAGATTTTCACGCTCTTGACTGATTCGGCTTTGGTTTTCGATTCCAGGGATCACTCGTGGCGAAAATTCAACAATTTCGAGGCGATTCTCGGGGATAATCATCGCCAAGAAGCTGCGTGCTATAACGGCCATTTGTATTTTGTTACGCCAAAACCATTTTCTATTGTTTCCTTCGATTTGGATAGTGGCGAGTGGGAGGTAACCGATACTATAATGCCTGAGGAGATGACGTTTGTTAGATTAGTGAGCGATGGAGATAGGAAACTGTACATGATCGGTGGAACAGGGAGGAATGGGATCTCGAGGAGGCTGAGATTATGGGAGTTCTCGGAAGAGGGGAATTGGGTGGAAGTTGAAAGTGTGCCACAGATGTTTTGCAAGAAGTTCATGTCGATTTGCTACCACAATTACGAGCATGTGTATTGCTTTTGGCATCAAGGAACCATCTGTGTTTGTTGCTACACTTGGCCGGAGATTTTGTATTACAAATTTTGCAGGAGATCATGGCATTGGCTTCCCAAATGCCCTTCTCTACCGGAGAGATGGAGCTGTGGTTTCAGGTGGTTCTCTTTTGTGCCACAGTTGTACGCATCTGCCTGA

Coding sequence (CDS)

ATGCGTCTATGGTGTGACAGAGAAGAGAGGAGGCAGAAAACCTATTTCAACCTGAGATCGACTTGCAAGCGTTTCGATTCCCTCTTGTATTCTCCTTGTTTCGTCTCTAAGCATTCCGATTCGTCTCTCTCTTCCTTCCTCTTGCTGGCGCATCCTCATTGTTTCAGTCAGTTTCCTCTCTACGACTCTGCTCTCGGCACTTGGCGGAGCTTACCGCTCACTCTTTCCGTTCCGCTTCTATCCGCTACTCCTTCTACTGCTCTTCTTTCCATAGCTGACGGCCTCGTTTGTTTCTCTCTTCGCAATTCCTGCTCCTTCGTTGTCTGCAATTTCTTGACTAAATCGTCGAGACTGATCGAGTTTCCGTATCATCCATTCAGATTCGAGCTGCTCACGTTGGTGTCCGTACCCCTAGGGTACAAGATTTTCACGCTCTTGACTGATTCGGCTTTGGTTTTCGATTCCAGGGATCACTCGTGGCGAAAATTCAACAATTTCGAGGCGATTCTCGGGGATAATCATCGCCAAGAAGCTGCGTGCTATAACGGCCATTTGTATTTTGTTACGCCAAAACCATTTTCTATTGTTTCCTTCGATTTGGATAGTGGCGAGTGGGAGGTAACCGATACTATAATGCCTGAGGAGATGACGTTTGTTAGATTAGTGAGCGATGGAGATAGGAAACTGTACATGATCGGTGGAACAGGGAGGAATGGGATCTCGAGGAGGCTGAGATTATGGGAGTTCTCGGAAGAGGGGAATTGGGTGGAAGTTGAAAGTGTGCCACAGATGTTTTGCAAGAAGTTCATGTCGATTTGCTACCACAATTACGAGCATGTGTATTGCTTTTGGCATCAAGGAACCATCTGTGTTTGTTGCTACACTTGGCCGGAGATTTTGTATTACAAATTTTGCAGGAGATCATGGCATTGGCTTCCCAAATGCCCTTCTCTACCGGAGAGATGGAGCTGTGGTTTCAGGTGGTTCTCTTTTGTGCCACAGTTGTACGCATCTGCCTGA

Protein sequence

MRLWCDREERRQKTYFNLRSTCKRFDSLLYSPCFVSKHSDSSLSSFLLLAHPHCFSQFPLYDSALGTWRSLPLTLSVPLLSATPSTALLSIADGLVCFSLRNSCSFVVCNFLTKSSRLIEFPYHPFRFELLTLVSVPLGYKIFTLLTDSALVFDSRDHSWRKFNNFEAILGDNHRQEAACYNGHLYFVTPKPFSIVSFDLDSGEWEVTDTIMPEEMTFVRLVSDGDRKLYMIGGTGRNGISRRLRLWEFSEEGNWVEVESVPQMFCKKFMSICYHNYEHVYCFWHQGTICVCCYTWPEILYYKFCRRSWHWLPKCPSLPERWSCGFRWFSFVPQLYASA

Homology

[Close]

BLAST of CmaCh05G001390 vs. ExPASy Swiss-Prot
Match: Q9FHS6 (F-box/kelch-repeat protein At5g43190 OS=Arabidopsis thaliana OX=3702 GN=At5g43190 PE=2 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.2e-97
Identity = 182/341 (53.37%), Postives = 235/341 (68.91%), Query Frame = 0


Query: 13  KTYFNLRSTCKRFDSLLYSPCFVSKHSDSSLSSFLLLAHPHCFSQFPLYDSALGTWRSLP 72
           KT   LRS  +   SL+ SP F+S HS  SL SFLLL+HP  F+ FPL++  L +W +LP
Sbjct: 66  KTLLTLRSISRHLRSLILSPSFISDHS-FSLPSFLLLSHPQSFNSFPLFNPNLISWCTLP 125

Query: 73  LTLSVPLLSATPSTALLSIADGLVCFSLRNS--CSFVVCNFLTKSSRLIEFPYHPFRFEL 132
           L  S   LS T +++LLS ++GL+CFSL  S   S  + N LT+SSR I+ P +PF FEL
Sbjct: 126 LPRS---LSLTCASSLLSSSNGLLCFSLSPSSVSSLSIFNPLTRSSRSIKLPCYPFPFEL 185

Query: 133 LTLVSVPLGYKIFTLLTDSA-------LVFDSRDHSWRKFNNFEAILGDNHRQEAACYNG 192
           L+LV+ P GYKIFTL + S+        ++DS D SWRKF   + +L     Q+   YNG
Sbjct: 186 LSLVTSPKGYKIFTLCSSSSAASSRSVCLYDSGDRSWRKFGGVDQVLPRGFNQDGVFYNG 245

Query: 193 HLYFVTPKPFSIVSFDLDSGEWEVT--DTIMP--EEMTFVRLVSDGDRK-LYMIGGTGRN 252
            LYF   +PF IVS DL+ G+W     D + P  +E+TF RLVSD ++K LYM+GG G N
Sbjct: 246 SLYFARSEPFLIVSVDLNDGKWTTATGDGVFPADDEITFARLVSDPEKKILYMVGGIGSN 305

Query: 253 GISRRLRLWEFSEE-GNWVEVESVPQMFCKKFMSICYHNYEHVYCFWHQGTICVCCYTWP 312
           GI R +++WEF EE  +W+EVE++P + C+KF S+CYHNYEHVYC WH+  ICVCCY WP
Sbjct: 306 GICRSIKIWEFKEETESWIEVETLPDIVCRKFTSVCYHNYEHVYCLWHKEMICVCCYNWP 365

Query: 313 EILYYKFCRRSWHWLPKCPSLPERWSCGFRWFSFVPQLYAS 339
           EIL++   RR+WHW+PKCPSLPE+WSCGFRWFSFVP L AS
Sbjct: 366 EILFFHVGRRTWHWVPKCPSLPEKWSCGFRWFSFVPSLSAS 402

[Close]

BLAST of CmaCh05G001390 vs. ExPASy Swiss-Prot
Match: Q9LFV5 (F-box/kelch-repeat protein At5g15710 OS=Arabidopsis thaliana OX=3702 GN=At5g15710 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.2e-19
Identity = 78/313 (24.92%), Postives = 140/313 (44.73%), Query Frame = 0


Query: 16  FNLRSTCKRFDSLLYSPCFVSKHSDSSLSSFLLLAHPHCFSQFP---LYDSALGTWRSLP 75
           F +RS CK+++ +L    F+  HS+ S     LL       Q P   ++   L TW  +P
Sbjct: 125 FRIRSVCKKWNLILQDNSFLKFHSNVSSHGPCLLTFWKNSPQIPQCSVFSLPLKTWYKIP 184

Query: 76  LTLSVPLLSATPSTALLSIADGLVCFSLRNSCSF--VVCNFLTKSSRLIEFPYHPFRFEL 135
            T   P      +  L+  + GLVCFS  +  +F  +VCN L +S R +   ++  + +L
Sbjct: 185 FTFLPPW-----AFWLVGSSGGLVCFSGLDGLTFRTLVCNPLMQSWRTLPSMHYNQQRQL 244

Query: 136 LTLVS-VPLGYKIFT---LLTDSAL---VFDSRDHSWRKFNNFEAILGDNHRQEAACYNG 195
           + +V      +K+     +  D +L   V+DS+   W       A+  +    + A  + 
Sbjct: 245 IMVVDRSDKSFKVIATSDIYGDKSLPTEVYDSKTDKWSLHQIMPAV--NLCSSKMAYCDS 304

Query: 196 HLYFVTPKPFSIVSFDLDSGEWEVTDTIMPEEMTFVRLVSDGDRKLYMIGGTGRNGISRR 255
            LY  T  P  ++ + LDSG+WE      P  +    LV+   ++L+++G  G     + 
Sbjct: 305 RLYLETLSPLGLMMYRLDSGQWEHIPAKFPRSLLDGYLVAGTQKRLFLVGRIGLYSTLQS 364

Query: 256 LRLWEFSE-EGNWVEVESVPQMFCKKFMSICYHNYEHVYCFWHQGTICVCCYTWPEILYY 315
           +R+WE    + +WVE+  +P  + +  + +    +E   CF     IC   +   + L Y
Sbjct: 365 MRIWELDHTKVSWVEISRMPPKYFRALLRLSAERFE---CFGQDNLICFTSWNQGKGLLY 424

[Close]

BLAST of CmaCh05G001390 vs. TAIR 10
Match: AT5G43190.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 357.1 bits (915), Expect = 1.6e-98
Identity = 182/341 (53.37%), Postives = 235/341 (68.91%), Query Frame = 0


Query: 13  KTYFNLRSTCKRFDSLLYSPCFVSKHSDSSLSSFLLLAHPHCFSQFPLYDSALGTWRSLP 72
           KT   LRS  +   SL+ SP F+S HS  SL SFLLL+HP  F+ FPL++  L +W +LP
Sbjct: 66  KTLLTLRSISRHLRSLILSPSFISDHS-FSLPSFLLLSHPQSFNSFPLFNPNLISWCTLP 125

Query: 73  LTLSVPLLSATPSTALLSIADGLVCFSLRNS--CSFVVCNFLTKSSRLIEFPYHPFRFEL 132
           L  S   LS T +++LLS ++GL+CFSL  S   S  + N LT+SSR I+ P +PF FEL
Sbjct: 126 LPRS---LSLTCASSLLSSSNGLLCFSLSPSSVSSLSIFNPLTRSSRSIKLPCYPFPFEL 185

Query: 133 LTLVSVPLGYKIFTLLTDSA-------LVFDSRDHSWRKFNNFEAILGDNHRQEAACYNG 192
           L+LV+ P GYKIFTL + S+        ++DS D SWRKF   + +L     Q+   YNG
Sbjct: 186 LSLVTSPKGYKIFTLCSSSSAASSRSVCLYDSGDRSWRKFGGVDQVLPRGFNQDGVFYNG 245

Query: 193 HLYFVTPKPFSIVSFDLDSGEWEVT--DTIMP--EEMTFVRLVSDGDRK-LYMIGGTGRN 252
            LYF   +PF IVS DL+ G+W     D + P  +E+TF RLVSD ++K LYM+GG G N
Sbjct: 246 SLYFARSEPFLIVSVDLNDGKWTTATGDGVFPADDEITFARLVSDPEKKILYMVGGIGSN 305

Query: 253 GISRRLRLWEFSEE-GNWVEVESVPQMFCKKFMSICYHNYEHVYCFWHQGTICVCCYTWP 312
           GI R +++WEF EE  +W+EVE++P + C+KF S+CYHNYEHVYC WH+  ICVCCY WP
Sbjct: 306 GICRSIKIWEFKEETESWIEVETLPDIVCRKFTSVCYHNYEHVYCLWHKEMICVCCYNWP 365

Query: 313 EILYYKFCRRSWHWLPKCPSLPERWSCGFRWFSFVPQLYAS 339
           EIL++   RR+WHW+PKCPSLPE+WSCGFRWFSFVP L AS
Sbjct: 366 EILFFHVGRRTWHWVPKCPSLPEKWSCGFRWFSFVPSLSAS 402

[Close]

BLAST of CmaCh05G001390 vs. TAIR 10
Match: AT5G15710.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 2.3e-20
Identity = 78/313 (24.92%), Postives = 140/313 (44.73%), Query Frame = 0


Query: 16  FNLRSTCKRFDSLLYSPCFVSKHSDSSLSSFLLLAHPHCFSQFP---LYDSALGTWRSLP 75
           F +RS CK+++ +L    F+  HS+ S     LL       Q P   ++   L TW  +P
Sbjct: 125 FRIRSVCKKWNLILQDNSFLKFHSNVSSHGPCLLTFWKNSPQIPQCSVFSLPLKTWYKIP 184

Query: 76  LTLSVPLLSATPSTALLSIADGLVCFSLRNSCSF--VVCNFLTKSSRLIEFPYHPFRFEL 135
            T   P      +  L+  + GLVCFS  +  +F  +VCN L +S R +   ++  + +L
Sbjct: 185 FTFLPPW-----AFWLVGSSGGLVCFSGLDGLTFRTLVCNPLMQSWRTLPSMHYNQQRQL 244

Query: 136 LTLVS-VPLGYKIFT---LLTDSAL---VFDSRDHSWRKFNNFEAILGDNHRQEAACYNG 195
           + +V      +K+     +  D +L   V+DS+   W       A+  +    + A  + 
Sbjct: 245 IMVVDRSDKSFKVIATSDIYGDKSLPTEVYDSKTDKWSLHQIMPAV--NLCSSKMAYCDS 304

Query: 196 HLYFVTPKPFSIVSFDLDSGEWEVTDTIMPEEMTFVRLVSDGDRKLYMIGGTGRNGISRR 255
            LY  T  P  ++ + LDSG+WE      P  +    LV+   ++L+++G  G     + 
Sbjct: 305 RLYLETLSPLGLMMYRLDSGQWEHIPAKFPRSLLDGYLVAGTQKRLFLVGRIGLYSTLQS 364

Query: 256 LRLWEFSE-EGNWVEVESVPQMFCKKFMSICYHNYEHVYCFWHQGTICVCCYTWPEILYY 315
           +R+WE    + +WVE+  +P  + +  + +    +E   CF     IC   +   + L Y
Sbjct: 365 MRIWELDHTKVSWVEISRMPPKYFRALLRLSAERFE---CFGQDNLICFTSWNQGKGLLY 424

The following BLAST results are available for this feature:

BLAST of CmaCh05G001390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHS6	2.2e-97	53.37	F-box/kelch-repeat protein At5g43190 OS=Arabidopsis thaliana OX=3702 GN=At5g4319...	[more]
Q9LFV5	3.2e-19	24.92	F-box/kelch-repeat protein At5g15710 OS=Arabidopsis thaliana OX=3702 GN=At5g1571...	[more]

BLAST of CmaCh05G001390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43190.1	1.6e-98	53.37	Galactose oxidase/kelch repeat superfamily protein	[more]
AT5G15710.1	2.3e-20	24.92	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 50..332 e-value: 4.2E-9 score: 37.8
None	No IPR available	PANTHER	PTHR46301:SF11	F-BOX/KELCH-REPEAT PLANT PROTEIN	coord: 13..337
None	No IPR available	PANTHER	PTHR46301	F-BOX/KELCH-REPEAT PROTEIN	coord: 13..337
IPR011043	Galactose oxidase/kelch, beta-propeller	SUPERFAMILY	50965	Galactose oxidase, central domain	coord: 58..317

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G001390.1	CmaCh05G001390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding