CmaCh04G027820 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G027820
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Vesicle transport v-SNARE family protein
Location	Cma_Chr04: 18668415 .. 18671641 (-)
RNA-Seq Expression	CmaCh04G027820
Synteny	CmaCh04G027820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGTTGGAAACAAAAGTATATAATGAATTGGCTAAGTTCCTTGAGACGCCGTTGGCCATCGAAGCCTTCATTTGCAACAACAAAATTTGGTGCTTCCGACGGGCGTCGGTACCTATTCCTCTTGTTCTTTAATTGTTCCAATTGCGTAGTCACGAATTTTCACGTTCATCTTCGCCGTTGGGCTTCACCATCTCTGATCGAATTGGGTAACCTATCGATTGATGTCTAATTCTCAGGGTCTTCCCAGAAATTGGGACCTTACATGTTGATCGGAGAGCGTTTGTTTTTTTTTTAATTGAATCGAATTGAAGCGTTGATGTTATGTTTTCCTACGAAGTTTTTCGAATAATCTTGTTTGATTGGCTGGGATCTGTCGTGCGAGTAAAATGCTGATTTCGCTGATTTGGGCAATTTGATTTTGAAGGTTTGGGCACGATGAGTGAGGTGTTTGAAGGGTATGAGCGCCAGTACTGCGAGATCTCAGCGAACCTCTCAAGAAAGTGCACTTCGGCTGGTGCTCTAAATGGAGGTATTTCCACCTGTTGATTTGTGAATTTTGGTTTCCATATGTGGTTATATTTTCAGATTCCACCTGAAAATTAAATTGAAATTCGCGCCAGTGGCTATTTCTCGATGTCTGTTATATATTTGTTTATGGATTGCTGATTTGTGATGCTAAATAACAATCGATTCGGGGGTCAAAACTTGTCAAATCTTGGTTAAAATAACTTTTGTCTGATTTTGAATTATTTCAACAACATGTTTTTTGTCCTGTTATAAAAATATTTAAATGACATCATGATAAAATATTTTAACCTTTTCAAAATCACTCTCTACGTGCCATTAGTTAATAATCGAATTACTATTCATAAGCGAATAACTGTTCATAGAGAAACATTTATGCATATTGTTAAAATCTGGATCAGTTCTAAGTTCTGTTAGATCCCTCACTCTTCATGTTTAGCTTGTTCATTCTTGAATTGGGAAATAATTCAGAAAGAAGATTAGAAAGAGTCCACTCCATATGGTATATTTTCATTTCATGTTAATGATTATTGTAATAATACTCGTTTTATGGTTGCCTTTCGATTTCCGTATCTCTCAACTTTTAACTGTGTGGAGCCAAAATCCTCCCCGTAGATTATTTGATATTACAATGTAGGATACTTTTACTTTGAAGAGATGTAGTAGTTCATTCCAACACGTACATCCAAATACTCGCAAGTACTCGCAAATACCTGCCAATAGGATGGTACTGTATTAGTAAGAGAAAGGAGAGAGATGTCCCATCCCTTCTTTATGCTAATCCATATACATAGTCAGTCTCAAAGGTGTATAATTTGTCAAAATTTGCAGCCTTTTTGGTCATTCATTGATTGTTATCTTACCTTCTCTCATGGCTGCCAAACGTCAACTGAGAGAGGAGAAGCAATGGCTCACGAATCAATTGGTTTCAAGCGGACTCATGGAGTTACTGCTTGGATTATTGTAAAATAAGAGGATTTTTAATCCTTTCTCAGCTTAGGAAATGACTTTTTAAGTTTAAGTGTTCACTATCTAGCTTCAAATTTTCTCTAACCTTTTCTTAGTGATGATCATTAAAATTCAATTTGTTTAGTTTCTTTCAAATTGAAGCTTCTTATTATTTCGTTTAATATTAGAGAAAAAAATAGACTGACGTTATTTGCTACATGAATGTATCATACCTGCAGAGCAAAAGAAGCAAACGGTTTCTGAAGTGAAGGCTGGGATTGATGAAGCAGAAGCTCTGGTACTTAGTTGACATGTCCTTGTTGAGAAAAATGCCTTCAAACATCATCTTTCAATGTTAATATTATATTCTTTGTGCTTTCTAGATTCGAAAAATGGATCTTGAGGCCAGAAGTTTGCCTCCTAATGTCAAGGCTGTCCTTTTGGCTAAATTAAGAGAGTACAAATCTGACCTCAACAATTTGAAAAGTGAAGTTAAACGCATTGAATCCGGAAACTTAAATGCAGCCACTAGAGATGAGTTGCTGGAATCAGGAATGGCTGATACACTGACGGTATGTCTGTATCCACTGCTATACTAATTGTTTTTATTACATATATGTTGAAATGACTTATTTTCTTCATCACTGCCCCTGCCATAGAATCTTCCAATTTTTTTGACGGGTTATAATAAATATATAAATGGGTGCACTCATCAGCTGTCCAAGACAATATGTATTAGGTTGTTTTTTGCTGTGCCTCATTGGAAAACCAAAGATGTTGGTGCTATGTTTCCTGTAGTTGTCAACGTTAAAGTTTTTAACCTATAACACATGCTTTCTCTTCCTTAATTCTTGATTTTAAGTCCTGAAGCATTCATATATTATCTTTTGCAATTGTGTATTAGCTATGACTCATGCCTCCTACCATTTCATATAGGCATCGACTGATCAAAGAGCAAGATTAATGACCACAACAGAGAGGCTAGGTAAGTCTAGTGATAGAATTAAGGAAAGTCGAAAAACCATGCTAGAAACAGAAGAACTTGGAGTTTCAATTCTTCAAGATTTGCACTCGCAGCGACAGTCTCTCTTGCATGCTCATAATACGGTATGCGATTTTACTCTTCATGTTATTTGTGATGTAGATTCTTTATATTGTGTTCTTGTGATTATGATAAACCAGCCATTGTATTTCATGGCCGCCATTATCTTTGTCAAGCAAATCCTTCCCTAATTTTTCCTTCTTAAATTTAGGCTACTTGATTTTTTTTCTTTCATGTTTGTTTTTAAAAATGTATTGCTTTTGGGGGTCTCTCTGCTTGTAGTTTTTATTCTATATTTTCCACCTTTTTCAGCTTCATGGAGTAGATGACAACATTGACAAGAGTAAGAGAGTTTTAACCAACATGTCAAGAAGGATGAACAAGAACAAATGGATTGTTACATCCATTATTGTTGTCCTTGTCTTGGCCATTGTCCTGATTTTGTACTTCAAACTTTCTAAATAGCAAGGTTATCTCCTTCATTTGGGTGTTGCTTGTTGAAACATGACTTCGTGTTTTCTTTTCTTTTTTTCTTTGTGGTCTGTTGTGAGTTTGCACAATGACTCATGTCAAGATTAACTATTTCTTGCCTGCGTCTCAGTCTTCTGTGTTCAAAAAACAATATTAATGATGTATAAGGTTTACCCAACATTTAATGTACTGTTCCTAATACCTTACAGGACATGGTATTCGTTTACTTTGAGAATACACA

mRNA sequence

AGGTTGGAAACAAAAGTATATAATGAATTGGCTAAGTTCCTTGAGACGCCGTTGGCCATCGAAGCCTTCATTTGCAACAACAAAATTTGGTGCTTCCGACGGGCGTCGGTACCTATTCCTCTTGTTCTTTAATTGTTCCAATTGCGTAGTCACGAATTTTCACGTTCATCTTCGCCGTTGGGCTTCACCATCTCTGATCGAATTGGGTTTGGGCACGATGAGTGAGGTGTTTGAAGGGTATGAGCGCCAGTACTGCGAGATCTCAGCGAACCTCTCAAGAAAGTGCACTTCGGCTGGTGCTCTAAATGGAGAGCAAAAGAAGCAAACGGTTTCTGAAGTGAAGGCTGGGATTGATGAAGCAGAAGCTCTGATTCGAAAAATGGATCTTGAGGCCAGAAGTTTGCCTCCTAATGTCAAGGCTGTCCTTTTGGCTAAATTAAGAGAGTACAAATCTGACCTCAACAATTTGAAAAGTGAAGTTAAACGCATTGAATCCGGAAACTTAAATGCAGCCACTAGAGATGAGTTGCTGGAATCAGGAATGGCTGATACACTGACGGCATCGACTGATCAAAGAGCAAGATTAATGACCACAACAGAGAGGCTAGGTAAGTCTAGTGATAGAATTAAGGAAAGTCGAAAAACCATGCTAGAAACAGAAGAACTTGGAGTTTCAATTCTTCAAGATTTGCACTCGCAGCGACAGTCTCTCTTGCATGCTCATAATACGCTTCATGGAGTAGATGACAACATTGACAAGAGTAAGAGAGTTTTAACCAACATGTCAAGAAGGATGAACAAGAACAAATGGATTGTTACATCCATTATTGTTGTCCTTGTCTTGGCCATTGTCCTGATTTTGTACTTCAAACTTTCTAAATAGCAAGGTTATCTCCTTCATTTGGGTGTTGCTTGTTGAAACATGACTTCGTGTTTTCTTTTCTTTTTTTCTTTGTGGTCTGTTGTGAGTTTGCACAATGACTCATGTCAAGATTAACTATTTCTTGCCTGCGTCTCAGTCTTCTGTGTTCAAAAAACAATATTAATGATGTATAAGGTTTACCCAACATTTAATGTACTGTTCCTAATACCTTACAGGACATGGTATTCGTTTACTTTGAGAATACACA

Coding sequence (CDS)

ATGAATTGGCTAAGTTCCTTGAGACGCCGTTGGCCATCGAAGCCTTCATTTGCAACAACAAAATTTGGTGCTTCCGACGGGCGTCGGTACCTATTCCTCTTGTTCTTTAATTGTTCCAATTGCGTAGTCACGAATTTTCACGTTCATCTTCGCCGTTGGGCTTCACCATCTCTGATCGAATTGGGTTTGGGCACGATGAGTGAGGTGTTTGAAGGGTATGAGCGCCAGTACTGCGAGATCTCAGCGAACCTCTCAAGAAAGTGCACTTCGGCTGGTGCTCTAAATGGAGAGCAAAAGAAGCAAACGGTTTCTGAAGTGAAGGCTGGGATTGATGAAGCAGAAGCTCTGATTCGAAAAATGGATCTTGAGGCCAGAAGTTTGCCTCCTAATGTCAAGGCTGTCCTTTTGGCTAAATTAAGAGAGTACAAATCTGACCTCAACAATTTGAAAAGTGAAGTTAAACGCATTGAATCCGGAAACTTAAATGCAGCCACTAGAGATGAGTTGCTGGAATCAGGAATGGCTGATACACTGACGGCATCGACTGATCAAAGAGCAAGATTAATGACCACAACAGAGAGGCTAGGTAAGTCTAGTGATAGAATTAAGGAAAGTCGAAAAACCATGCTAGAAACAGAAGAACTTGGAGTTTCAATTCTTCAAGATTTGCACTCGCAGCGACAGTCTCTCTTGCATGCTCATAATACGCTTCATGGAGTAGATGACAACATTGACAAGAGTAAGAGAGTTTTAACCAACATGTCAAGAAGGATGAACAAGAACAAATGGATTGTTACATCCATTATTGTTGTCCTTGTCTTGGCCATTGTCCTGATTTTGTACTTCAAACTTTCTAAATAG

Protein sequence

MNWLSSLRRRWPSKPSFATTKFGASDGRRYLFLLFFNCSNCVVTNFHVHLRRWASPSLIELGLGTMSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEARSLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQRARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIDKSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK

Homology

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BLAST of CmaCh04G027820 vs. ExPASy Swiss-Prot
Match: Q9LVP9 (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 5.2e-87
Identity = 166/221 (75.11%), Postives = 199/221 (90.05%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 125
           MS+ FE YERQYCEISANLS+KCTSA AL+GEQKKQ +SE+K+G++EAEAL++KMDLEAR
Sbjct: 1   MSQGFERYERQYCEISANLSKKCTSAIALDGEQKKQNLSEIKSGVEEAEALVKKMDLEAR 60

Query: 126 SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 185
           +LPPNVK+ LL KLREYKSDLNN K+EVKRI SGNLNA  RDELLE+GMADTLTAS DQR
Sbjct: 61  NLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLTASADQR 120

Query: 186 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 245
           +RLM +T+ LG+++DRIK+SR+T+LETEELGVSILQDLH QRQSLL AH TLHGVDDN+ 
Sbjct: 121 SRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHGVDDNVG 180

Query: 246 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           KSK++LT M+RRMN+NKW + +II VLVLAI+ ILYFKL++
Sbjct: 181 KSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKLTR 221

[Close]

BLAST of CmaCh04G027820 vs. ExPASy Swiss-Prot
Match: Q9SEL6 (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2)

HSP 1 Score: 316.6 bits (810), Expect = 2.8e-85
Identity = 161/221 (72.85%), Postives = 199/221 (90.05%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 125
           MS+VF+GYERQYCE+SA+LS+KC+SA +L+GEQKKQ +SE+K+G++ AE LIRKMDLEAR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 126 SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 185
           +LPPN+K+ LL KLRE+KSDLNN K+EVKRI SG LNAA RDELLE+GMADT TAS DQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 186 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 245
           ARLM +TERLG+++DR+K+SR+TM+ETEE+GVSILQDLH QRQSLL AH TLHGVDDNI 
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETLHGVDDNIG 180

Query: 246 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           KSK++LT+M+RRMNKNKW + +II+ L+ AI +ILYFKL+K
Sbjct: 181 KSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKLTK 221

[Close]

BLAST of CmaCh04G027820 vs. ExPASy Swiss-Prot
Match: Q9SEL5 (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3)

HSP 1 Score: 284.6 bits (727), Expect = 1.2e-75
Identity = 152/221 (68.78%), Postives = 183/221 (82.81%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGAL-NGEQKKQTVSEVKAGIDEAEALIRKMDLEA 125
           MS+VFEGYERQYCE+S NLSRKC SA  L NGE+KK  ++E+K+GIDEA+ LIRKMDLEA
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 126 RSLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQ 185
           RSL P+ KAV L+KLREYKSDLN LK E KR+ S +   ++R+EL+ESGMAD    S DQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 186 RARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNI 245
           R RL  + ERL +SSDRI+ESR+ MLETEE+G+SI+QDL  QRQ+LLHAHN LHGVDD I
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAI 180

Query: 246 DKSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLS 286
           DKSK+VLT MSRRM +NKWI+TS+IV LVLAI+LI+ +KLS
Sbjct: 181 DKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKLS 221

[Close]

BLAST of CmaCh04G027820 vs. ExPASy Swiss-Prot
Match: Q96AJ9 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens OX=9606 GN=VTI1A PE=1 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-25
Identity = 70/221 (31.67%), Postives = 129/221 (58.37%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 125
           MS  FEGYE+ +  ++A ++ K      L  ++KKQ V+ V+  ++EA+ L+ +MDLE R
Sbjct: 1   MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR 60

Query: 126 SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 185
            +PP  + +   ++R YK ++  L+++ KR        A  DE+    + D   +S +QR
Sbjct: 61  EIPPQSRGMYSNRMRSYKQEMGKLETDFKR-----SRIAYSDEVRNELLGDDGNSSENQR 120

Query: 186 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 245
           A L+  TERL +SS R++   +  +ETE++G  +L++L   R+ +  A   L   D N+ 
Sbjct: 121 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDANLG 180

Query: 246 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           KS R+LT M RR+ +N+ ++  + +++V+ I++ + F + +
Sbjct: 181 KSSRILTGMLRRIIQNRILLVILGIIVVITILMAITFSVRR 216

[Close]

BLAST of CmaCh04G027820 vs. ExPASy Swiss-Prot
Match: O89116 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus OX=10090 GN=Vti1a PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-25
Identity = 71/217 (32.72%), Postives = 127/217 (58.53%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 125
           MS  FEGYE+ +  ++A ++ K      L  ++KKQ V+ V+  ++EA  L+ +MDLE R
Sbjct: 1   MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR 60

Query: 126 SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 185
            +PP  + +   ++R YK ++  L+++ KR        A  DE+    + D   +S +QR
Sbjct: 61  EIPPQSRGMYSNRMRSYKQEMGKLETDFKR-----SRIAYSDEVRNELLGDAGNSSENQR 120

Query: 186 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 245
           A L+  TERL +SS R++   +  +ETE++G  +L++L   R+ +  A + L   D N+ 
Sbjct: 121 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARDRLRDADANLG 180

Query: 246 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYF 283
           KS R+LT M RR+ +N+ ++  + +++V+AI+  + F
Sbjct: 181 KSSRILTGMLRRIIQNRILLVILGIIVVIAILTAIAF 212

[Close]

BLAST of CmaCh04G027820 vs. ExPASy TrEMBL
Match: A0A6J1JRA0 (vesicle transport v-SNARE 13-like OS=Cucurbita maxima OX=3661 GN=LOC111487628 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.7e-109
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 125
           MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 60

Query: 126 SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 185
           SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR
Sbjct: 61  SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 120

Query: 186 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 245
           ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID
Sbjct: 121 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 180

Query: 246 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK
Sbjct: 181 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 221

[Close]

BLAST of CmaCh04G027820 vs. ExPASy TrEMBL
Match: A0A6J1HEW1 (vesicle transport v-SNARE 13-like OS=Cucurbita moschata OX=3662 GN=LOC111462405 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.5e-108
Identity = 219/221 (99.10%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 125
           MSEVFEGYERQYCE+SANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 60

Query: 126 SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 185
           SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR
Sbjct: 61  SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 120

Query: 186 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 245
           ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTL+GVDDNID
Sbjct: 121 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLYGVDDNID 180

Query: 246 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK
Sbjct: 181 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 221

[Close]

BLAST of CmaCh04G027820 vs. ExPASy TrEMBL
Match: A0A6J1FHT9 (vesicle transport v-SNARE 13-like OS=Cucurbita moschata OX=3662 GN=LOC111445475 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 7.5e-105
Identity = 210/221 (95.02%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 125
           MSEVFEGYERQYCE+SANLSRKCTSA ALNGEQKKQ VSEVK+GIDEAEALIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQRVSEVKSGIDEAEALIRKMDLEAR 60

Query: 126 SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 185
           SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTAS DQR
Sbjct: 61  SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120

Query: 186 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 245
            RLMTTTERLGKSSDRIKESR+TMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNI 
Sbjct: 121 TRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180

Query: 246 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           KSKR+LTNMSRRMNKNKWIVTSIIVVLVLAI++ILYFKLSK
Sbjct: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIIMILYFKLSK 221

[Close]

BLAST of CmaCh04G027820 vs. ExPASy TrEMBL
Match: A0A6J1K0S2 (vesicle transport v-SNARE 13 OS=Cucurbita maxima OX=3661 GN=LOC111489592 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.8e-104
Identity = 209/221 (94.57%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 125
           MS VFEGYERQYCE+SANLSRKCTSA ALNGEQKKQ VSEVK+GIDEAEALIRKMDLEAR
Sbjct: 1   MSGVFEGYERQYCELSANLSRKCTSASALNGEQKKQRVSEVKSGIDEAEALIRKMDLEAR 60

Query: 126 SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 185
           SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTAS DQR
Sbjct: 61  SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120

Query: 186 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 245
            RLMTTTERLGKSSDRIKESR+TMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNI 
Sbjct: 121 TRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180

Query: 246 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           KSKR+LTNMSRRMNKNKWIVTSIIVVLVLAI++ILYFKLSK
Sbjct: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIIMILYFKLSK 221

[Close]

BLAST of CmaCh04G027820 vs. ExPASy TrEMBL
Match: A0A6J1BWH0 (vesicle transport v-SNARE 13-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006334 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 1.1e-103
Identity = 210/221 (95.02%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 125
           MSEVFEGYERQYCE+SANLSRKCTSA ALNGEQKKQ VSEVKAGID+AEALIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAGIDDAEALIRKMDLEAR 60

Query: 126 SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 185
           SL PNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR
Sbjct: 61  SLQPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 120

Query: 186 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 245
           ARLMTTTERLGKSSDRIKESR+TMLETEELGVSILQDLHSQRQSLL AH+TLHGVDDNI 
Sbjct: 121 ARLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLQAHSTLHGVDDNIG 180

Query: 246 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           KSKR+LTNMSRRMNKNKWIVTSIIVVLVLAI+LILYFKLSK
Sbjct: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK 221

[Close]

BLAST of CmaCh04G027820 vs. NCBI nr
Match: KAG6602513.1 (Vesicle transport v-SNARE 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 435.3 bits (1118), Expect = 4.2e-118
Identity = 235/238 (98.74%), Postives = 237/238 (99.58%), Query Frame = 0


Query: 49  HLRRWASPSLIELGLGTMSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKA 108
           +LR WASPSLIELGLGTMSEVFEGYERQYCE+SANLSRKCTSAGALNGEQKKQTVSEVKA
Sbjct: 20  NLRPWASPSLIELGLGTMSEVFEGYERQYCELSANLSRKCTSAGALNGEQKKQTVSEVKA 79

Query: 109 GIDEAEALIRKMDLEARSLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDE 168
           GIDEAEALIRKMDLEARSLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDE
Sbjct: 80  GIDEAEALIRKMDLEARSLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDE 139

Query: 169 LLESGMADTLTASTDQRARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQ 228
           LLESGMADTLTASTDQRARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQ
Sbjct: 140 LLESGMADTLTASTDQRARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQ 199

Query: 229 SLLHAHNTLHGVDDNIDKSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           SLLHAHNTLHGVDDNIDKSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK
Sbjct: 200 SLLHAHNTLHGVDDNIDKSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 257

[Close]

BLAST of CmaCh04G027820 vs. NCBI nr
Match: KAG6578564.1 (Vesicle transport v-SNARE 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 415.6 bits (1067), Expect = 3.4e-112
Identity = 222/234 (94.87%), Postives = 229/234 (97.86%), Query Frame = 0


Query: 53  WASPSLIELGLGTMSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDE 112
           WASPSLI+LGLGTMSEVFEGYERQYCE+SANLSRKCTSA ALNGEQKKQ VSEVK+GIDE
Sbjct: 46  WASPSLIKLGLGTMSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQRVSEVKSGIDE 105

Query: 113 AEALIRKMDLEARSLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLES 172
           AEALIRKMDLEARSLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLES
Sbjct: 106 AEALIRKMDLEARSLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLES 165

Query: 173 GMADTLTASTDQRARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLH 232
           GMADTLTAS DQR RLMTTTERLGKSSDRIKESR+TMLETEELGVSILQDLHSQRQSLLH
Sbjct: 166 GMADTLTASADQRTRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLH 225

Query: 233 AHNTLHGVDDNIDKSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           AHNTLHGVDDNI KSKR+LTNMSRRMNKNKWIVTSIIVVLVLAI++ILYFKLSK
Sbjct: 226 AHNTLHGVDDNIGKSKRILTNMSRRMNKNKWIVTSIIVVLVLAIIMILYFKLSK 279

[Close]

BLAST of CmaCh04G027820 vs. NCBI nr
Match: KAG7033186.1 (Vesicle transport v-SNARE 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 411.4 bits (1056), Expect = 6.5e-111
Identity = 223/229 (97.38%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 58  LIELGLGTMSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALI 117
           ++   LGTMSEVFEGYERQYCE+SANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALI
Sbjct: 1   MLSCRLGTMSEVFEGYERQYCELSANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALI 60

Query: 118 RKMDLEARSLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADT 177
           RKMDLEARSLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADT
Sbjct: 61  RKMDLEARSLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADT 120

Query: 178 LTASTDQRARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTL 237
           LTASTDQRARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTL
Sbjct: 121 LTASTDQRARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTL 180

Query: 238 HGVDDNIDKSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           HGVDDNIDKSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK
Sbjct: 181 HGVDDNIDKSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 229

[Close]

BLAST of CmaCh04G027820 vs. NCBI nr
Match: XP_022990864.1 (vesicle transport v-SNARE 13-like [Cucurbita maxima] >XP_022990865.1 vesicle transport v-SNARE 13-like [Cucurbita maxima])

HSP 1 Score: 405.6 bits (1041), Expect = 3.5e-109
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 125
           MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 60

Query: 126 SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 185
           SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR
Sbjct: 61  SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 120

Query: 186 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 245
           ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID
Sbjct: 121 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 180

Query: 246 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK
Sbjct: 181 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 221

[Close]

BLAST of CmaCh04G027820 vs. NCBI nr
Match: XP_023517006.1 (vesicle transport v-SNARE 13-like [Cucurbita pepo subsp. pepo] >XP_023517007.1 vesicle transport v-SNARE 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.8 bits (1039), Expect = 6.1e-109
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 125
           MSEVFEGYERQYCE+SANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 60

Query: 126 SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 185
           SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR
Sbjct: 61  SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 120

Query: 186 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 245
           ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID
Sbjct: 121 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 180

Query: 246 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK
Sbjct: 181 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 221

[Close]

BLAST of CmaCh04G027820 vs. TAIR 10
Match: AT5G39510.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 316.6 bits (810), Expect = 2.0e-86
Identity = 161/221 (72.85%), Postives = 199/221 (90.05%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 125
           MS+VF+GYERQYCE+SA+LS+KC+SA +L+GEQKKQ +SE+K+G++ AE LIRKMDLEAR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 126 SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 185
           +LPPN+K+ LL KLRE+KSDLNN K+EVKRI SG LNAA RDELLE+GMADT TAS DQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 186 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 245
           ARLM +TERLG+++DR+K+SR+TM+ETEE+GVSILQDLH QRQSLL AH TLHGVDDNI 
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETLHGVDDNIG 180

Query: 246 KSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           KSK++LT+M+RRMNKNKW + +II+ L+ AI +ILYFKL+K
Sbjct: 181 KSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKLTK 221

[Close]

BLAST of CmaCh04G027820 vs. TAIR 10
Match: AT1G26670.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 284.6 bits (727), Expect = 8.5e-77
Identity = 152/221 (68.78%), Postives = 183/221 (82.81%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGAL-NGEQKKQTVSEVKAGIDEAEALIRKMDLEA 125
           MS+VFEGYERQYCE+S NLSRKC SA  L NGE+KK  ++E+K+GIDEA+ LIRKMDLEA
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 126 RSLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQ 185
           RSL P+ KAV L+KLREYKSDLN LK E KR+ S +   ++R+EL+ESGMAD    S DQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 186 RARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNI 245
           R RL  + ERL +SSDRI+ESR+ MLETEE+G+SI+QDL  QRQ+LLHAHN LHGVDD I
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAI 180

Query: 246 DKSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLS 286
           DKSK+VLT MSRRM +NKWI+TS+IV LVLAI+LI+ +KLS
Sbjct: 181 DKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKLS 221

[Close]

BLAST of CmaCh04G027820 vs. TAIR 10
Match: AT3G29100.1 (vesicle transport V-snare 13 )

HSP 1 Score: 245.4 bits (625), Expect = 5.7e-65
Identity = 127/170 (74.71%), Postives = 152/170 (89.41%), Query Frame = 0


Query: 117 IRKMDLEARSLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMAD 176
           ++KMDLEAR+LPPNVK+ LL KLREYKSDLNN K+EVKRI SGNLNA  RDELLE+GMAD
Sbjct: 26  VKKMDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMAD 85

Query: 177 TLTASTDQRARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNT 236
           TLTAS DQR+RLM +T+ LG+++DRIK+SR+T+LETEELGVSILQDLH QRQSLL AH T
Sbjct: 86  TLTASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHET 145

Query: 237 LHGVDDNIDKSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           LHGVDDN+ KSK++LT M+RRMN+NKW + +II VLVLAI+ ILYFKL++
Sbjct: 146 LHGVDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKLTR 195

[Close]

BLAST of CmaCh04G027820 vs. TAIR 10
Match: AT3G29100.2 (vesicle transport V-snare 13 )

HSP 1 Score: 241.5 bits (615), Expect = 8.3e-64
Identity = 126/167 (75.45%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 120 MDLEARSLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLT 179
           MDLEAR+LPPNVK+ LL KLREYKSDLNN K+EVKRI SGNLNA  RDELLE+GMADTLT
Sbjct: 1   MDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLT 60

Query: 180 ASTDQRARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHG 239
           AS DQR+RLM +T+ LG+++DRIK+SR+T+LETEELGVSILQDLH QRQSLL AH TLHG
Sbjct: 61  ASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHG 120

Query: 240 VDDNIDKSKRVLTNMSRRMNKNKWIVTSIIVVLVLAIVLILYFKLSK 287
           VDDN+ KSK++LT M+RRMN+NKW + +II VLVLAI+ ILYFKL++
Sbjct: 121 VDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKLTR 167

[Close]

BLAST of CmaCh04G027820 vs. TAIR 10
Match: AT5G39630.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 157.1 bits (396), Expect = 2.0e-38
Identity = 90/209 (43.06%), Postives = 142/209 (67.94%), Query Frame = 0


Query: 66  MSEVFEGYERQYCEISANLSRKCTSAGALNGEQKKQTVSEVKAGIDEAEALIRKMDLEAR 125
           MS VF  Y++QY E+S NLS+KC+ A +L G +KK+ +SE+   ++ AE LI KMD  A 
Sbjct: 1   MSNVFHEYDQQYSELSINLSKKCSLAFSLKGGEKKEKLSEITYDLENAEKLISKMDHAAS 60

Query: 126 SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 185
           +LPPN+K++LL KL+E KS L  L++E+KR  S NL   TR+E+LE+  AD      DQR
Sbjct: 61  NLPPNIKSILLEKLKESKSSLKRLRNEIKRNTSENLKVTTREEVLEAEKADL----ADQR 120

Query: 186 ARLMTTTERLGKSSDRIKESRKTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNID 245
           +RLM +TE L ++ + IK+S++ +LETE +G+SIL++L  Q++SL ++   LH +DD + 
Sbjct: 121 SRLMKSTEGLVRTREMIKDSQRKLLETENIGISILENLQRQKESLQNSQAMLHEIDDTVK 180

Query: 246 KSKRVLTNMSRRMNKNKWIVTSIIVVLVL 275
           +S+ ++ ++     K  + VT+ I++  L
Sbjct: 181 ESRSIVRSIK---IKEFFTVTAPIIIYFL 202

The following BLAST results are available for this feature:

BLAST of CmaCh04G027820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVP9	5.2e-87	75.11	Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1	[more]
Q9SEL6	2.8e-85	72.85	Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2	[more]
Q9SEL5	1.2e-75	68.78	Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3	[more]
Q96AJ9	1.1e-25	31.67	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens O...	[more]
O89116	1.1e-25	32.72	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus O...	[more]

BLAST of CmaCh04G027820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRA0	1.7e-109	100.00	vesicle transport v-SNARE 13-like OS=Cucurbita maxima OX=3661 GN=LOC111487628 PE...	[more]
A0A6J1HEW1	1.5e-108	99.10	vesicle transport v-SNARE 13-like OS=Cucurbita moschata OX=3662 GN=LOC111462405 ...	[more]
A0A6J1FHT9	7.5e-105	95.02	vesicle transport v-SNARE 13-like OS=Cucurbita moschata OX=3662 GN=LOC111445475 ...	[more]
A0A6J1K0S2	4.8e-104	94.57	vesicle transport v-SNARE 13 OS=Cucurbita maxima OX=3661 GN=LOC111489592 PE=3 SV...	[more]
A0A6J1BWH0	1.1e-103	95.02	vesicle transport v-SNARE 13-like isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of CmaCh04G027820 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602513.1	4.2e-118	98.74	Vesicle transport v-SNARE 13, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6578564.1	3.4e-112	94.87	Vesicle transport v-SNARE 13, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7033186.1	6.5e-111	97.38	Vesicle transport v-SNARE 13, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022990864.1	3.5e-109	100.00	vesicle transport v-SNARE 13-like [Cucurbita maxima] >XP_022990865.1 vesicle tra...	[more]
XP_023517006.1	6.1e-109	99.55	vesicle transport v-SNARE 13-like [Cucurbita pepo subsp. pepo] >XP_023517007.1 v...	[more]

BLAST of CmaCh04G027820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39510.1	2.0e-86	72.85	Vesicle transport v-SNARE family protein	[more]
AT1G26670.1	8.5e-77	68.78	Vesicle transport v-SNARE family protein	[more]
AT3G29100.1	5.7e-65	74.71	vesicle transport V-snare 13	[more]
AT3G29100.2	8.3e-64	75.45	vesicle transport V-snare 13	[more]
AT5G39630.1	2.0e-38	43.06	Vesicle transport v-SNARE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..159
None	No IPR available	PFAM	PF12352	V-SNARE_C	coord: 193..258 e-value: 1.7E-22 score: 79.5
None	No IPR available	GENE3D	1.20.5.110		coord: 182..262 e-value: 1.5E-25 score: 91.1
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 66..285
None	No IPR available	PANTHER	PTHR21230:SF67	VESICLE TRANSPORT V-SNARE 13-LIKE	coord: 66..285
None	No IPR available	CDD	cd15862	SNARE_Vti1	coord: 192..253 e-value: 1.55184E-23 score: 89.1252
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 195..254
IPR007705	Vesicle transport v-SNARE, N-terminal	PFAM	PF05008	V-SNARE	coord: 77..155 e-value: 9.0E-26 score: 90.1
IPR038407	Vesicle transport v-SNARE, N-terminal domain superfamily	GENE3D	1.20.58.400		coord: 64..162 e-value: 5.0E-34 score: 118.5
IPR010989	SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 71..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G027820.1	CmaCh04G027820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006906	vesicle fusion
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0012507	ER to Golgi transport vesicle membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031902	late endosome membrane
cellular_component	GO:0031201	SNARE complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding