CmaCh04G020310 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G020310
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	basic form of pathogenesis-related protein 1-like
Location	Cma_Chr04: 12946947 .. 12947450 (+)
RNA-Seq Expression	CmaCh04G020310
Synteny	CmaCh04G020310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGACTCAAACCCTTCCGATCATGACCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAATCAAAGCTCAAAACACCCCCGGTGACTACCTCGCGCTTCACAACCGAGCTCGAGCCGAGGTAAGCGTCGGGCCCATGCAATGGAGCAACACCGTGGCCGTGTACGCTCAAGCCTATGAGGAAAAAAGAAAGGGTGACTGCGCCATGATCCACTCAACCGGGCCGTACGGGGAAAACATAACCGCGGGCTACTACCCTGAATTCTTCAGAGCGGATGCGGTGAAGCTGTGGGCAAACGAGAAGCCGCTGTATGATCATGCGTATAATAAATGCGTGGGTGGTAAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAATGCCCTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCAAGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTTGTATGA

mRNA sequence

ATGTGGACTCAAACCCTTCCGATCATGACCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAATCAAAGCTCAAAACACCCCCGGTGACTACCTCGCGCTTCACAACCGAGCTCGAGCCGAGGTAAGCGTCGGGCCCATGCAATGGAGCAACACCGTGGCCGTGTACGCTCAAGCCTATGAGGAAAAAAGAAAGGGTGACTGCGCCATGATCCACTCAACCGGGCCGTACGGGGAAAACATAACCGCGGGCTACTACCCTGAATTCTTCAGAGCGGATGCGGTGAAGCTGTGGGCAAACGAGAAGCCGCTGTATGATCATGCGTATAATAAATGCGTGGGTGGTAAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAATGCCCTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCAAGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTTGTATGA

Coding sequence (CDS)

ATGTGGACTCAAACCCTTCCGATCATGACCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAATCAAAGCTCAAAACACCCCCGGTGACTACCTCGCGCTTCACAACCGAGCTCGAGCCGAGGTAAGCGTCGGGCCCATGCAATGGAGCAACACCGTGGCCGTGTACGCTCAAGCCTATGAGGAAAAAAGAAAGGGTGACTGCGCCATGATCCACTCAACCGGGCCGTACGGGGAAAACATAACCGCGGGCTACTACCCTGAATTCTTCAGAGCGGATGCGGTGAAGCTGTGGGCAAACGAGAAGCCGCTGTATGATCATGCGTATAATAAATGCGTGGGTGGTAAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAATGCCCTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCAAGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTTGTATGA

Protein sequence

MWTQTLPIMTAFMATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKGDCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGHYTQMVWRSSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV

Homology

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BLAST of CmaCh04G020310 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-47
Identity = 87/157 (55.41%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 6   LPIMTAFMATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKR 65
           L  + A   TF  L+   KAQN+P DYL  HN AR +V VGPM W N +A YAQ Y  +R
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 66  KGDCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGHYTQMV 125
            GDC MIHS GPYGEN+ A  +P+   A AVK+W +EK  YD+  N CVGG CGHYTQ+V
Sbjct: 64  IGDCGMIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVV 123

Query: 126 WRSSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPY 163
           WR+SVRLGCAR+       F+ CNYDPP N+IG++P+
Sbjct: 124 WRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of CmaCh04G020310 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.3e-41
Identity = 77/155 (49.68%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 12  FMATFIFLLALI----KAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKG 71
           F+  F+ L+  +    KAQ++P DYL +HN+AR  V VGPMQW   VA YA++Y E+ +G
Sbjct: 9   FLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRG 68

Query: 72  DCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGHYTQMVWR 131
           +C +IHS GPYGEN+  G   +     AV +W +EK  Y++A N C  G CGHYTQ+VWR
Sbjct: 69  NCRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWR 128

Query: 132 SSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPY 163
            SVRLGCA++ C      + CNYDP  NY+ EKPY
Sbjct: 129 KSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmaCh04G020310 vs. ExPASy Swiss-Prot
Match: Q04108 (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-39
Identity = 80/156 (51.28%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 11  AFMATFIFLLALI---KAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKG 70
           + + T + +LA+    +AQN+P DYLA+HN ARA+V VGPM W   +A  AQ Y   R G
Sbjct: 7   SLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAG 66

Query: 71  DCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGK-CGHYTQMVW 130
           DC +IHS    GEN+  G   +F    AV+LW +E+P Y++A N+CVGGK CGHYTQ+VW
Sbjct: 67  DCNLIHSGA--GENLAKG-GGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVW 126

Query: 131 RSSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPY 163
           R+SVRLGC R  C     F+ CNYDP  N++GE+PY
Sbjct: 127 RNSVRLGCGRARCNNGWWFISCNYDPVGNWVGERPY 159

[Close]

BLAST of CmaCh04G020310 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.8e-39
Identity = 74/156 (47.44%), Postives = 97/156 (62.18%), Query Frame = 0


Query: 8   IMTAFMATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKG 67
           ++ + +  F+ +    +AQN+  DYL  HN ARA+V V P+ W + VA YAQ Y  +   
Sbjct: 13  LLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAA 72

Query: 68  DCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGK-CGHYTQMVW 127
           DC ++HS G YGEN+  G       A AV++W +EK  YDH  N C  G+ CGHYTQ+VW
Sbjct: 73  DCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 132

Query: 128 RSSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPY 163
           R+SVR+GCAR+ C      V CNYDPP NY GE PY
Sbjct: 133 RNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of CmaCh04G020310 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.1e-39
Identity = 79/151 (52.32%), Postives = 96/151 (63.58%), Query Frame = 0


Query: 8   IMTAFMATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKG 67
           I  A   TFI +    +AQ    ++L  HN AR  V VGPM W + +A YAQ Y  +R  
Sbjct: 5   IFVACFITFI-IFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRAD 64

Query: 68  DCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGK-CGHYTQMVW 127
           DC MIHS GPYGEN+ A  +P+   A AVK+W +EK  YD+  N C  GK CGHYTQ+VW
Sbjct: 65  DCGMIHSDGPYGENLAAA-FPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVW 124

Query: 128 RSSVRLGCARMPCKANSQFVVCNYDPPSNYI 158
           R SVRLGCAR+ C +   F+ CNYDPP NYI
Sbjct: 125 RKSVRLGCARVRCNSGWVFITCNYDPPGNYI 153

[Close]

BLAST of CmaCh04G020310 vs. ExPASy TrEMBL
Match: A0A6J1I807 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470477 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.2e-89
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 13  MATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKGDCAMI 72
           MATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKGDCAMI
Sbjct: 1   MATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKGDCAMI 60

Query: 73  HSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGHYTQMVWRSSVRL 132
           HSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGHYTQMVWRSSVRL
Sbjct: 61  HSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGHYTQMVWRSSVRL 120

Query: 133 GCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV 168
           GCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV
Sbjct: 121 GCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV 155

[Close]

BLAST of CmaCh04G020310 vs. ExPASy TrEMBL
Match: A0A6J1I475 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470480 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.1e-87
Identity = 152/167 (91.02%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MWTQTLPIMTAFMATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQA 60
           MWTQTL IM AFM TFIFLLAL KAQN PGDYLALHNRARAEV VGPMQWSNTVA YAQA
Sbjct: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60

Query: 61  YEEKRKGDCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGH 120
           Y EKRKGDCAMIHSTGPYGENI AGYYPEF  ADAVKLWANEKPLYDHA NKCVGG+CGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCAR+PCKANSQFVVCNYDPP NYIGEKPYDSWVV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]

BLAST of CmaCh04G020310 vs. ExPASy TrEMBL
Match: A0A6J1ICC8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111474223 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.1e-87
Identity = 152/167 (91.02%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MWTQTLPIMTAFMATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQA 60
           MWTQTL IM AFM TFIFLLAL KAQN PGDYLALHNRARAEV VGPMQWSNTVA YAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YEEKRKGDCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGH 120
           Y EKRKGDCAMIHSTGPYGENI AGYYPEF  ADAVKLWANEKPLYDHA NKCVGG+CGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCAR+PCKANSQFVVCNYDPP NYIGEKPYDSWVV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 194

[Close]

BLAST of CmaCh04G020310 vs. ExPASy TrEMBL
Match: A0A6J1IH08 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111473365 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.1e-87
Identity = 152/167 (91.02%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MWTQTLPIMTAFMATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQA 60
           MWTQTL IM AFM TFIFLLAL KAQN PGDYLALHNRARAEV VGPMQWSNTVA YAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNVPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YEEKRKGDCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGH 120
           Y EKRKGDCAMIHSTGPYGENI AGYYPEF  ADAVKLWANEKPLYDHA NKCVGG+CGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCAR+PCKANSQFVVCNYDPP NYIGEKPYDSWVV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 194

[Close]

BLAST of CmaCh04G020310 vs. ExPASy TrEMBL
Match: A0A6J1IC05 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111473363 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 9.1e-87
Identity = 151/167 (90.42%), Postives = 153/167 (91.62%), Query Frame = 0


Query: 1   MWTQTLPIMTAFMATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQA 60
           MWTQTL IM AFM TFIFLLAL KAQN PGDYLALHNRARAEV VGPMQWSNTVA YAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YEEKRKGDCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGH 120
           Y EKRKGDCAMIHSTGPYGENI  GYYPEF  ADAVKLWANEKPLYDHA NKCVGG+CGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAVGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCAR+PCKANSQFVVCNYDPP NYIGEKPYDSWVV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 194

[Close]

BLAST of CmaCh04G020310 vs. NCBI nr
Match: XP_022971798.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 339.0 bits (868), Expect = 2.4e-89
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 13  MATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKGDCAMI 72
           MATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKGDCAMI
Sbjct: 1   MATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKGDCAMI 60

Query: 73  HSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGHYTQMVWRSSVRL 132
           HSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGHYTQMVWRSSVRL
Sbjct: 61  HSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGHYTQMVWRSSVRL 120

Query: 133 GCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV 168
           GCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV
Sbjct: 121 GCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV 155

[Close]

BLAST of CmaCh04G020310 vs. NCBI nr
Match: XP_022971803.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022971804.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022971806.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974680.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974686.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974689.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974690.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975182.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975183.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 330.9 bits (847), Expect = 6.5e-87
Identity = 152/167 (91.02%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MWTQTLPIMTAFMATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQA 60
           MWTQTL IM AFM TFIFLLAL KAQN PGDYLALHNRARAEV VGPMQWSNTVA YAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YEEKRKGDCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGH 120
           Y EKRKGDCAMIHSTGPYGENI AGYYPEF  ADAVKLWANEKPLYDHA NKCVGG+CGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCAR+PCKANSQFVVCNYDPP NYIGEKPYDSWVV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 194

[Close]

BLAST of CmaCh04G020310 vs. NCBI nr
Match: XP_022971801.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022971802.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974677.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974684.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974688.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975326.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975679.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 330.9 bits (847), Expect = 6.5e-87
Identity = 152/167 (91.02%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MWTQTLPIMTAFMATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQA 60
           MWTQTL IM AFM TFIFLLAL KAQN PGDYLALHNRARAEV VGPMQWSNTVA YAQA
Sbjct: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60

Query: 61  YEEKRKGDCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGH 120
           Y EKRKGDCAMIHSTGPYGENI AGYYPEF  ADAVKLWANEKPLYDHA NKCVGG+CGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCAR+PCKANSQFVVCNYDPP NYIGEKPYDSWVV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]

BLAST of CmaCh04G020310 vs. NCBI nr
Match: XP_022974678.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 330.9 bits (847), Expect = 6.5e-87
Identity = 152/167 (91.02%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MWTQTLPIMTAFMATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQA 60
           MWTQTL IM AFM TFIFLLAL KAQN PGDYLALHNRARAEV VGPMQWSNTVA YAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNVPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YEEKRKGDCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGH 120
           Y EKRKGDCAMIHSTGPYGENI AGYYPEF  ADAVKLWANEKPLYDHA NKCVGG+CGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCAR+PCKANSQFVVCNYDPP NYIGEKPYDSWVV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 194

[Close]

BLAST of CmaCh04G020310 vs. NCBI nr
Match: XP_023521428.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.5 bits (846), Expect = 8.5e-87
Identity = 151/167 (90.42%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MWTQTLPIMTAFMATFIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQA 60
           MW QTLPIM AFMATFIFLLAL  AQN PGDYLALHNRARA+V VGPMQWSNTVAVYAQA
Sbjct: 1   MWAQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAVYAQA 60

Query: 61  YEEKRKGDCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGH 120
           Y EKRKGDCAMIHSTGPYGENI AGYYPEF  ADAVKLWANEKPLYDHA NKCVGG+CGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPYDSWVV 168
           YT MVWRSSVRLGCAR+PCKANSQFVVCNYDPP NYIGEKPYDSWVV
Sbjct: 121 YTHMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]

BLAST of CmaCh04G020310 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 176.4 bits (446), Expect = 1.9e-44
Identity = 79/146 (54.11%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 18  FLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKGDCAMIHSTGP 77
           FL+    AQNTP DYL  HN ARA+V V  + W  T+A YA  Y   RK DC ++HS GP
Sbjct: 16  FLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGP 75

Query: 78  YGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGK-CGHYTQMVWRSSVRLGCAR 137
           YGEN+  G    F    AVKLW +EKP Y +AYN C GGK C HYTQ+VWR SV++GCAR
Sbjct: 76  YGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGCAR 135

Query: 138 MPCKANSQFVVCNYDPPSNYIGEKPY 163
           + C     FV CNY+ P N++GE PY
Sbjct: 136 VQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of CmaCh04G020310 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 171.8 bits (434), Expect = 4.7e-43
Identity = 79/148 (53.38%), Postives = 102/148 (68.92%), Query Frame = 0


Query: 16  FIFLLALIKAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKGDCAMIHST 75
           F+ L+  +KAQ++P D+LA+HNRARAEV VGP++W   VA YA+ Y  +RKGDCAM HS+
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 76  GPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGK-CGHYTQMVWRSSVRLGC 135
           G YGENI A          AV +W +E+  YD+  N C   K CGHYTQ+VWR+S RLGC
Sbjct: 77  GSYGENI-AWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGC 136

Query: 136 ARMPCKANSQFVVCNYDPPSNYIGEKPY 163
           A++ C     F+ CNYDPP N++GE PY
Sbjct: 137 AKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of CmaCh04G020310 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 169.1 bits (427), Expect = 3.0e-42
Identity = 77/155 (49.68%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 12  FMATFIFLLALI----KAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKG 71
           F+  F+ L+  +    KAQ++P DYL +HN+AR  V VGPMQW   VA YA++Y E+ +G
Sbjct: 9   FLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRG 68

Query: 72  DCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGHYTQMVWR 131
           +C +IHS GPYGEN+  G   +     AV +W +EK  Y++A N C  G CGHYTQ+VWR
Sbjct: 69  NCRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWR 128

Query: 132 SSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPY 163
            SVRLGCA++ C      + CNYDP  NY+ EKPY
Sbjct: 129 KSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmaCh04G020310 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-40
Identity = 76/161 (47.20%), Postives = 102/161 (63.35%), Query Frame = 0


Query: 9   MTAFMATFIFLLALI-------KAQNTPGDYLALHNRARAEVSVGPMQWSNTVAVYAQAY 68
           +T++    I L AL+       KAQ++  DY+  HN+AR+++ VGPMQW   +A YA+ Y
Sbjct: 3   VTSYSRILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNY 62

Query: 69  EEKRKGDCAMIHSTGPYGENITAGYYPEFFRADAVKLWANEKPLYDHAYNKCVGGKCGHY 128
             + KGDC ++HS GPYGEN+ A    +     AV LW NEK  Y++  N C  G CGHY
Sbjct: 63  ANQLKGDCRLVHSRGPYGENL-AKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHY 122

Query: 129 TQMVWRSSVRLGCARMPCKANSQFVVCNYDPPSNYIGEKPY 163
           TQ+VWR+SVRLGCA++ C      + CNYDPP NY  +KPY
Sbjct: 123 TQVVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of CmaCh04G020310 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 158.3 bits (399), Expect = 5.4e-39
Identity = 73/136 (53.68%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 29  PGDYLALHNRARAEVSVGPMQWSNTVAVYAQAYEEKRKGDCAMIHSTGPYGENITAGYYP 88
           P + L +HN+ARA V VGPM W+ T+A YAQ+Y  +R  DCAM HS GP+GEN+ AG + 
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAG-WG 101

Query: 89  EFFRADAVKLWANEKPLYDHAYNKCVG-GKCGHYTQMVWRSSVRLGCARMPCKANSQ-FV 148
                 A + W  EK  YD+  N C G G CGHYTQ+VWR SVRLGCA + CK +   +V
Sbjct: 102 TMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYIWV 161

Query: 149 VCNYDPPSNYIGEKPY 163
           +C+YDPP NYIG++PY
Sbjct: 162 ICSYDPPGNYIGQRPY 176

The following BLAST results are available for this feature:

BLAST of CmaCh04G020310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	1.1e-47	55.41	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P33154	4.3e-41	49.68	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
Q04108	1.1e-39	51.28	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P08299	1.8e-39	47.44	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
Q08697	3.1e-39	52.32	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]

BLAST of CmaCh04G020310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I807	1.2e-89	100.00	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1I475	3.1e-87	91.02	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1ICC8	3.1e-87	91.02	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1IH08	3.1e-87	91.02	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1IC05	9.1e-87	90.42	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CmaCh04G020310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971798.1	2.4e-89	100.00	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]
XP_022971803.1	6.5e-87	91.02	basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_0229718...	[more]
XP_022971801.1	6.5e-87	91.02	basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_0229718...	[more]
XP_022974678.1	6.5e-87	91.02	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]
XP_023521428.1	8.5e-87	90.42	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh04G020310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50060.1	1.9e-44	54.11	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G33720.1	4.7e-43	53.38	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	3.0e-42	49.68	pathogenesis-related gene 1	[more]
AT2G14580.1	2.8e-40	47.20	basic pathogenesis-related protein 1	[more]
AT2G19990.1	5.4e-39	53.68	pathogenesis-related protein-1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 118..134 score: 63.28 coord: 145..158 score: 50.98 coord: 48..66 score: 30.3 coord: 95..108 score: 38.5
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 19..162
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 48..66 score: 22.37 coord: 93..108 score: 30.47 coord: 117..136 score: 54.38
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 27..158 e-value: 7.9E-50 score: 181.5
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 33..150 e-value: 1.4E-19 score: 71.2
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 24..167 e-value: 6.3E-39 score: 135.5
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 17..163
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 19..162
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 29..162 e-value: 2.95169E-74 score: 216.731
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 119..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020310.1	CmaCh04G020310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane