CmaCh04G020010 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G020010
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionlysine-rich arabinogalactan protein 19-like
LocationCma_Chr04: 12181555 .. 12182384 (-)
RNA-Seq ExpressionCmaCh04G020010
SyntenyCmaCh04G020010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAAATCATGCCCTCTTTTGGTCATCTGCCTTGCCTTTTTATTCCCTCTAGCCATCAGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCAACGCCACCGCCATCCACCCCGCCACCTACCATAACAATTACACCACCCCCTAATGTTGCTGCACCATCAATAACCCCGACTATCCCACCACCCCAACCGCCTCAAACCCCACCTGTCTCCACCCCGTCTCTGCCTCCGGTATTGCCACCTCCACCTGTTACTCCTCCACCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTTTACCGGCGCCACAGATCTCTCCAACCCCTTTGCAGATAGCGCCGTTGCCGACTCCGCCAACACCGGTGCCTTCACGGCCAATGCTAGCTCCGGTTGCAGTGCCAGAGTTAGCCCCTGCACCAGCTCCGGGAAAGCATAAGCATAGAAGGCGTCACAAACATAAAAAGCATCAAGCCCCAGCCCCAGCCCCAGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAGGATAGTACAGCACCAGCGCCATCACCAAATCTGGTGAGTAAATCACTGTCATTATGTCTTGTTTTTATTTAAATATCTATATAGCATTAATGAAAATGAAGAAAAGGTAAAATTGAGATTTGTGTTCTAATACCATATTTGTTTATCCACAGAACGGAGGAGACCCAATGAAAGAAAAGGTGGGAACATGGGCCAGAATTGTATTGGGATTTATAATTGTGGTTGCTACCACAGCCTTCCATTTCTAG

mRNA sequence

ATGGCTTCCAAATCATGCCCTCTTTTGGTCATCTGCCTTGCCTTTTTATTCCCTCTAGCCATCAGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCAACGCCACCGCCATCCACCCCGCCACCTACCATAACAATTACACCACCCCCTAATGTTGCTGCACCATCAATAACCCCGACTATCCCACCACCCCAACCGCCTCAAACCCCACCTGTCTCCACCCCGTCTCTGCCTCCGGTATTGCCACCTCCACCTGTTACTCCTCCACCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTTTACCGGCGCCACAGATCTCTCCAACCCCTTTGCAGATAGCGCCGTTGCCGACTCCGCCAACACCGGTGCCTTCACGGCCAATGCTAGCTCCGGTTGCAGTGCCAGAGTTAGCCCCTGCACCAGCTCCGGGAAAGCATAAGCATAGAAGGCGTCACAAACATAAAAAGCATCAAGCCCCAGCCCCAGCCCCAGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAGGATAGTACAGCACCAGCGCCATCACCAAATCTGAACGGAGGAGACCCAATGAAAGAAAAGGTGGGAACATGGGCCAGAATTGTATTGGGATTTATAATTGTGGTTGCTACCACAGCCTTCCATTTCTAG

Coding sequence (CDS)

ATGGCTTCCAAATCATGCCCTCTTTTGGTCATCTGCCTTGCCTTTTTATTCCCTCTAGCCATCAGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCAACGCCACCGCCATCCACCCCGCCACCTACCATAACAATTACACCACCCCCTAATGTTGCTGCACCATCAATAACCCCGACTATCCCACCACCCCAACCGCCTCAAACCCCACCTGTCTCCACCCCGTCTCTGCCTCCGGTATTGCCACCTCCACCTGTTACTCCTCCACCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTTTACCGGCGCCACAGATCTCTCCAACCCCTTTGCAGATAGCGCCGTTGCCGACTCCGCCAACACCGGTGCCTTCACGGCCAATGCTAGCTCCGGTTGCAGTGCCAGAGTTAGCCCCTGCACCAGCTCCGGGAAAGCATAAGCATAGAAGGCGTCACAAACATAAAAAGCATCAAGCCCCAGCCCCAGCCCCAGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAGGATAGTACAGCACCAGCGCCATCACCAAATCTGAACGGAGGAGACCCAATGAAAGAAAAGGTGGGAACATGGGCCAGAATTGTATTGGGATTTATAATTGTGGTTGCTACCACAGCCTTCCATTTCTAG

Protein sequence

MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF
Homology
BLAST of CmaCh04G020010 vs. ExPASy Swiss-Prot
Match: Q9S740 (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 PE=2 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 4.4e-15
Identity = 103/239 (43.10%), Postives = 126/239 (52.72%), Query Frame = 0

Query: 8   LLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITPTIPPPQP 67
           LL   L   F +      A P +  T  PPP+T  P  T  PPP    P ++   PP  P
Sbjct: 11  LLASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASP 70

Query: 68  PQTPPVSTPSLPPVLPPPPV----TPPPLPP--PPATPPPLPPPPATPPPLPPPLPAPQI 127
              PP  TP+ PP     PV    TPPP PP  PPA+ P + PPP +PPP P   P    
Sbjct: 71  VTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPA 130

Query: 128 SPTPLQIAPLPTPPTPVPSRPMLAPVAVP---ELAPAPAPGKHKHRRRHKHKK-HQAPAP 187
           SP P   +P P P +P P+     PV  P    L PAPAP   KH+R+HKHK+ H APAP
Sbjct: 131 SPPPAPASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRKHKHKRHHHAPAP 190

Query: 188 APAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVG---TWARIVLGFIIVVATTA 234
           AP  PSPP+PP + D QD TAPAPSPN NGG+ + +  G    W    L  + ++A TA
Sbjct: 191 APIPPSPPSPPVLTDPQD-TAPAPSPNTNGGNALNQLKGRAVMWLNTGLVILFLLAMTA 248

BLAST of CmaCh04G020010 vs. ExPASy TrEMBL
Match: A0A6J1IGY8 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC111472835 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.7e-107
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
           MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP
Sbjct: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60

Query: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
           TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120

Query: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
           ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA
Sbjct: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180

Query: 181 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF 237
           VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF
Sbjct: 181 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF 236

BLAST of CmaCh04G020010 vs. ExPASy TrEMBL
Match: A0A6J1EVZ4 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC111436552 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 2.0e-95
Identity = 217/237 (91.56%), Postives = 221/237 (93.25%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
           MASKSC LLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSI P
Sbjct: 1   MASKSCHLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60

Query: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
           TIPPPQPPQTPPVSTPSLPPV PPPPV          TPPPLPPPPATPPPLPPPLPAPQ
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPVFPPPPV----------TPPPLPPPPATPPPLPPPLPAPQ 120

Query: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
           ISPTPLQ+APLPTPPTPVPS PMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA
Sbjct: 121 ISPTPLQVAPLPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180

Query: 181 VPSPPAPPTVVDSQ-DSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF 237
           VPSPPAPPTVVDSQ DSTAPAPSPNLNGGDPMKEKVG WAR+VLGFIIVVA+TAF+F
Sbjct: 181 VPSPPAPPTVVDSQDDSTAPAPSPNLNGGDPMKEKVGRWARVVLGFIIVVASTAFNF 227

BLAST of CmaCh04G020010 vs. ExPASy TrEMBL
Match: A0A0A0LHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.9e-62
Identity = 168/241 (69.71%), Postives = 187/241 (77.59%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITI-----TPPPNVAA 60
           MASKS    VICLAFLF  + +QAPAQPPSLPT +PPP+TPPPT+       TPPP V A
Sbjct: 15  MASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA 74

Query: 61  PSITPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLP-P 120
           PS +PTIP   PPQ+ PVSTPSLPP LPPPP TPPPL      PPPLPPP  +P PLP P
Sbjct: 75  PSTSPTIP---PPQSSPVSTPSLPPALPPPPATPPPL------PPPLPPPQVSPTPLPTP 134

Query: 121 PLPAPQISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQA 180
           P+ AP ++P      PLPTPPTP PS P  APVA PE +PAPAPGKHKHRRRHKHKKHQA
Sbjct: 135 PVLAPTLAP-----LPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQA 194

Query: 181 PAPAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAF 236
           PAPAP VPSPPAPPTVVDSQDSTAPAPSP+LNGGDP+K KVG W+++ LGFI +VATT F
Sbjct: 195 PAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIFLVATTGF 241

BLAST of CmaCh04G020010 vs. ExPASy TrEMBL
Match: A0A1S3C506 (lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 4.6e-60
Identity = 168/241 (69.71%), Postives = 184/241 (76.35%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITI-----TPPPNVAA 60
           MASK     VICLAFLF  AI+QAPAQPPSLPT +PPPSTPPPT+       TPPP V A
Sbjct: 1   MASKLWSFSVICLAFLFSSAIAQAPAQPPSLPTVSPPPSTPPPTVPTPPPLSTPPPTVVA 60

Query: 61  PSITPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLP-P 120
           PS +P IP   PPQ+ PVSTPSLPP  PPPP TPPPL      PPPLPPP  +P PLP P
Sbjct: 61  PSTSPAIP---PPQSSPVSTPSLPPAFPPPPATPPPL------PPPLPPPQVSPIPLPTP 120

Query: 121 PLPAPQISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQA 180
           P+ AP ++P      PLPT PTP PS P  APVA PEL+PAPAPGKHKHRRRHKHKKHQA
Sbjct: 121 PVLAPTLAP-----LPLPTSPTPTPSPPTPAPVASPELSPAPAPGKHKHRRRHKHKKHQA 180

Query: 181 PAPAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAF 236
           PAPAP VPSPPAPPTVVDSQDSTAPAPSP+L+ GDPMK KVGTW ++ LGFI +VATT F
Sbjct: 181 PAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLSRGDPMKGKVGTWTKVGLGFIFLVATTGF 227

BLAST of CmaCh04G020010 vs. ExPASy TrEMBL
Match: A0A6J1DYJ7 (lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC111025417 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.5e-58
Identity = 164/242 (67.77%), Postives = 183/242 (75.62%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPST------PPPTITITPPPNVA 60
           MASKS P+LVI LAFLF  AI QAPAQPPSLPT + PPST       PP ++ TPPPNV 
Sbjct: 1   MASKSWPVLVIWLAFLFYPAIGQAPAQPPSLPTTSSPPSTLAPTVATPPPLSSTPPPNVV 60

Query: 61  APSITPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPP 120
           APS +PT+PPPQPPQ  PVSTPSLPP LPPPP TPPPLPPPP   P         P   P
Sbjct: 61  APSTSPTVPPPQPPQITPVSTPSLPPTLPPPPATPPPLPPPPQVSP--------TPAQAP 120

Query: 121 PLPAPQISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQA 180
            +PAP ++P P   APLP PPTP    P+ APV VP  +PAPAPGKH+H+R HKHKKH A
Sbjct: 121 SVPAPTLAPLPNPPAPLPPPPTPA---PVAAPVLVP--SPAPAPGKHRHKRHHKHKKHPA 180

Query: 181 PAPAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAF 237
           PAPAP +PSPPAPPTVVDSQDSTAPAPSPNLNGGDPM+ KV TW R+VLGFII+VATT+ 
Sbjct: 181 PAPAPTMPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMEGKVRTWTRVVLGFIILVATTSL 229

BLAST of CmaCh04G020010 vs. NCBI nr
Match: XP_022974214.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita maxima])

HSP 1 Score: 398.7 bits (1023), Expect = 3.6e-107
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
           MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP
Sbjct: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60

Query: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
           TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120

Query: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
           ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA
Sbjct: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180

Query: 181 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF 237
           VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF
Sbjct: 181 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF 236

BLAST of CmaCh04G020010 vs. NCBI nr
Match: XP_023514677.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 365.2 bits (936), Expect = 4.4e-97
Identity = 220/237 (92.83%), Postives = 223/237 (94.09%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
           MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP
Sbjct: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60

Query: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
           TIPPPQPPQTPPVSTPSLPP LPPPPV          TPPPLPPPPATPPPLPPPLPAPQ
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPALPPPPV----------TPPPLPPPPATPPPLPPPLPAPQ 120

Query: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
           ISPTPLQ+APLPTPPTPVPS PMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA
Sbjct: 121 ISPTPLQVAPLPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180

Query: 181 VPSPPAPPTVVDSQ-DSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF 237
           VPSPPAPPTVVDSQ DSTAPAPSPNLNGGDPMK+KVGTWARIVLGFIIVVATT F+F
Sbjct: 181 VPSPPAPPTVVDSQDDSTAPAPSPNLNGGDPMKQKVGTWARIVLGFIIVVATTPFNF 227

BLAST of CmaCh04G020010 vs. NCBI nr
Match: XP_022930065.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita moschata])

HSP 1 Score: 358.6 bits (919), Expect = 4.1e-95
Identity = 217/237 (91.56%), Postives = 221/237 (93.25%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
           MASKSC LLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSI P
Sbjct: 1   MASKSCHLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60

Query: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
           TIPPPQPPQTPPVSTPSLPPV PPPPV          TPPPLPPPPATPPPLPPPLPAPQ
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPVFPPPPV----------TPPPLPPPPATPPPLPPPLPAPQ 120

Query: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
           ISPTPLQ+APLPTPPTPVPS PMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA
Sbjct: 121 ISPTPLQVAPLPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180

Query: 181 VPSPPAPPTVVDSQ-DSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF 237
           VPSPPAPPTVVDSQ DSTAPAPSPNLNGGDPMKEKVG WAR+VLGFIIVVA+TAF+F
Sbjct: 181 VPSPPAPPTVVDSQDDSTAPAPSPNLNGGDPMKEKVGRWARVVLGFIIVVASTAFNF 227

BLAST of CmaCh04G020010 vs. NCBI nr
Match: KAG6601764.1 (hypothetical protein SDJN03_06997, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.1 bits (788), Expect = 6.4e-80
Identity = 191/206 (92.72%), Postives = 194/206 (94.17%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
           MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSI P
Sbjct: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60

Query: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
           TIPPPQPPQTPPVSTPSLPPVLPPPPV          TPPPLPPPPATPPPLPPPLPAPQ
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPV----------TPPPLPPPPATPPPLPPPLPAPQ 120

Query: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
           ISPTPLQ+APLPTPPTPVPS+PMLAPVAVPELAPAPAPGKHKHRRRHKHKKH+APAPAPA
Sbjct: 121 ISPTPLQVAPLPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPA 180

Query: 181 VPSPPAPPTVVDSQ-DSTAPAPSPNL 206
           VPSPPAPPTVVDSQ DSTAPAPSPNL
Sbjct: 181 VPSPPAPPTVVDSQDDSTAPAPSPNL 196

BLAST of CmaCh04G020010 vs. NCBI nr
Match: XP_038875574.1 (lysine-rich arabinogalactan protein 19-like [Benincasa hispida])

HSP 1 Score: 258.1 bits (658), Expect = 7.5e-65
Identity = 174/242 (71.90%), Postives = 188/242 (77.69%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITI-----TPPPNVAA 60
           MASKS P  VICL FLFP AI QAP QPP+LPT +PPPSTPPPT+T      TPPP V A
Sbjct: 1   MASKSWPFSVICLGFLFPFAIGQAPVQPPTLPTVSPPPSTPPPTVTTPPPLSTPPPTVVA 60

Query: 61  PSITPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATP-PPLPP 120
           PS +PTIPPPQ    PP+STPSLPP LPPPP TPPPL      PPPLPPP  +P P   P
Sbjct: 61  PSTSPTIPPPQ----PPISTPSLPPALPPPPATPPPL------PPPLPPPQVSPTPSQAP 120

Query: 121 PLPAPQISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQA 180
           P+PAP        +APL TPPTP+PS P  AP+AVPELAPAPAPGKHKHRR HKHKKHQA
Sbjct: 121 PVPAP-------TLAPLLTPPTPMPSPPTPAPIAVPELAPAPAPGKHKHRRHHKHKKHQA 180

Query: 181 PAPAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAF 237
           PAPAP VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMK KV T +R+VLGFI +VATT F
Sbjct: 181 PAPAPTVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVETCSRVVLGFIFLVATTGF 225

BLAST of CmaCh04G020010 vs. TAIR 10
Match: AT1G68725.1 (arabinogalactan protein 19 )

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-16
Identity = 103/239 (43.10%), Postives = 126/239 (52.72%), Query Frame = 0

Query: 8   LLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITPTIPPPQP 67
           LL   L   F +      A P +  T  PPP+T  P  T  PPP    P ++   PP  P
Sbjct: 11  LLASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASP 70

Query: 68  PQTPPVSTPSLPPVLPPPPV----TPPPLPP--PPATPPPLPPPPATPPPLPPPLPAPQI 127
              PP  TP+ PP     PV    TPPP PP  PPA+ P + PPP +PPP P   P    
Sbjct: 71  VTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPA 130

Query: 128 SPTPLQIAPLPTPPTPVPSRPMLAPVAVP---ELAPAPAPGKHKHRRRHKHKK-HQAPAP 187
           SP P   +P P P +P P+     PV  P    L PAPAP   KH+R+HKHK+ H APAP
Sbjct: 131 SPPPAPASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRKHKHKRHHHAPAP 190

Query: 188 APAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVG---TWARIVLGFIIVVATTA 234
           AP  PSPP+PP + D QD TAPAPSPN NGG+ + +  G    W    L  + ++A TA
Sbjct: 191 APIPPSPPSPPVLTDPQD-TAPAPSPNTNGGNALNQLKGRAVMWLNTGLVILFLLAMTA 248

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9S7404.4e-1543.10Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 ... [more]
Match NameE-valueIdentityDescription
A0A6J1IGY81.7e-107100.00lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1EVZ42.0e-9591.56lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A0A0LHJ42.9e-6269.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1[more]
A0A1S3C5064.6e-6069.71lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 P... [more]
A0A6J1DYJ72.5e-5867.77lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
Match NameE-valueIdentityDescription
XP_022974214.13.6e-107100.00lysine-rich arabinogalactan protein 19-like [Cucurbita maxima][more]
XP_023514677.14.4e-9792.83lysine-rich arabinogalactan protein 19-like [Cucurbita pepo subsp. pepo][more]
XP_022930065.14.1e-9591.56lysine-rich arabinogalactan protein 19-like [Cucurbita moschata][more]
KAG6601764.16.4e-8092.72hypothetical protein SDJN03_06997, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038875574.17.5e-6571.90lysine-rich arabinogalactan protein 19-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT1G68725.13.1e-1643.10arabinogalactan protein 19 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 16..37
score: 24.55
coord: 38..54
score: 34.12
coord: 55..72
score: 37.78
coord: 75..100
score: 44.62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..153
NoneNo IPR availablePANTHERPTHR36549:SF3LYSINE-RICH ARABINOGALACTAN PROTEIN 19coord: 24..232
IPR038793Lysine-rich arabinogalactan protein 19PANTHERPTHR36549LYSINE-RICH ARABINOGALACTAN PROTEIN 19coord: 24..232

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G020010.1CmaCh04G020010.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005886 plasma membrane