Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAAATCATGCCCTCTTTTGGTCATCTGCCTTGCCTTTTTATTCCCTCTAGCCATCAGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCAACGCCACCGCCATCCACCCCGCCACCTACCATAACAATTACACCACCCCCTAATGTTGCTGCACCATCAATAACCCCGACTATCCCACCACCCCAACCGCCTCAAACCCCACCTGTCTCCACCCCGTCTCTGCCTCCGGTATTGCCACCTCCACCTGTTACTCCTCCACCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTTTACCGGCGCCACAGATCTCTCCAACCCCTTTGCAGATAGCGCCGTTGCCGACTCCGCCAACACCGGTGCCTTCACGGCCAATGCTAGCTCCGGTTGCAGTGCCAGAGTTAGCCCCTGCACCAGCTCCGGGAAAGCATAAGCATAGAAGGCGTCACAAACATAAAAAGCATCAAGCCCCAGCCCCAGCCCCAGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAGGATAGTACAGCACCAGCGCCATCACCAAATCTGGTGAGTAAATCACTGTCATTATGTCTTGTTTTTATTTAAATATCTATATAGCATTAATGAAAATGAAGAAAAGGTAAAATTGAGATTTGTGTTCTAATACCATATTTGTTTATCCACAGAACGGAGGAGACCCAATGAAAGAAAAGGTGGGAACATGGGCCAGAATTGTATTGGGATTTATAATTGTGGTTGCTACCACAGCCTTCCATTTCTAG
mRNA sequence
ATGGCTTCCAAATCATGCCCTCTTTTGGTCATCTGCCTTGCCTTTTTATTCCCTCTAGCCATCAGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCAACGCCACCGCCATCCACCCCGCCACCTACCATAACAATTACACCACCCCCTAATGTTGCTGCACCATCAATAACCCCGACTATCCCACCACCCCAACCGCCTCAAACCCCACCTGTCTCCACCCCGTCTCTGCCTCCGGTATTGCCACCTCCACCTGTTACTCCTCCACCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTTTACCGGCGCCACAGATCTCTCCAACCCCTTTGCAGATAGCGCCGTTGCCGACTCCGCCAACACCGGTGCCTTCACGGCCAATGCTAGCTCCGGTTGCAGTGCCAGAGTTAGCCCCTGCACCAGCTCCGGGAAAGCATAAGCATAGAAGGCGTCACAAACATAAAAAGCATCAAGCCCCAGCCCCAGCCCCAGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAGGATAGTACAGCACCAGCGCCATCACCAAATCTGAACGGAGGAGACCCAATGAAAGAAAAGGTGGGAACATGGGCCAGAATTGTATTGGGATTTATAATTGTGGTTGCTACCACAGCCTTCCATTTCTAG
Coding sequence (CDS)
ATGGCTTCCAAATCATGCCCTCTTTTGGTCATCTGCCTTGCCTTTTTATTCCCTCTAGCCATCAGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCAACGCCACCGCCATCCACCCCGCCACCTACCATAACAATTACACCACCCCCTAATGTTGCTGCACCATCAATAACCCCGACTATCCCACCACCCCAACCGCCTCAAACCCCACCTGTCTCCACCCCGTCTCTGCCTCCGGTATTGCCACCTCCACCTGTTACTCCTCCACCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTTTACCGGCGCCACAGATCTCTCCAACCCCTTTGCAGATAGCGCCGTTGCCGACTCCGCCAACACCGGTGCCTTCACGGCCAATGCTAGCTCCGGTTGCAGTGCCAGAGTTAGCCCCTGCACCAGCTCCGGGAAAGCATAAGCATAGAAGGCGTCACAAACATAAAAAGCATCAAGCCCCAGCCCCAGCCCCAGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAGGATAGTACAGCACCAGCGCCATCACCAAATCTGAACGGAGGAGACCCAATGAAAGAAAAGGTGGGAACATGGGCCAGAATTGTATTGGGATTTATAATTGTGGTTGCTACCACAGCCTTCCATTTCTAG
Protein sequence
MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF
Homology
BLAST of CmaCh04G020010 vs. ExPASy Swiss-Prot
Match:
Q9S740 (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 PE=2 SV=2)
HSP 1 Score: 83.2 bits (204), Expect = 4.4e-15
Identity = 103/239 (43.10%), Postives = 126/239 (52.72%), Query Frame = 0
Query: 8 LLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITPTIPPPQP 67
LL L F + A P + T PPP+T P T PPP P ++ PP P
Sbjct: 11 LLASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASP 70
Query: 68 PQTPPVSTPSLPPVLPPPPV----TPPPLPP--PPATPPPLPPPPATPPPLPPPLPAPQI 127
PP TP+ PP PV TPPP PP PPA+ P + PPP +PPP P P
Sbjct: 71 VTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPA 130
Query: 128 SPTPLQIAPLPTPPTPVPSRPMLAPVAVP---ELAPAPAPGKHKHRRRHKHKK-HQAPAP 187
SP P +P P P +P P+ PV P L PAPAP KH+R+HKHK+ H APAP
Sbjct: 131 SPPPAPASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRKHKHKRHHHAPAP 190
Query: 188 APAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVG---TWARIVLGFIIVVATTA 234
AP PSPP+PP + D QD TAPAPSPN NGG+ + + G W L + ++A TA
Sbjct: 191 APIPPSPPSPPVLTDPQD-TAPAPSPNTNGGNALNQLKGRAVMWLNTGLVILFLLAMTA 248
BLAST of CmaCh04G020010 vs. ExPASy TrEMBL
Match:
A0A6J1IGY8 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC111472835 PE=4 SV=1)
HSP 1 Score: 398.7 bits (1023), Expect = 1.7e-107
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP
Sbjct: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
Query: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
Query: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA
Sbjct: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
Query: 181 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF 237
VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF
Sbjct: 181 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF 236
BLAST of CmaCh04G020010 vs. ExPASy TrEMBL
Match:
A0A6J1EVZ4 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC111436552 PE=4 SV=1)
HSP 1 Score: 358.6 bits (919), Expect = 2.0e-95
Identity = 217/237 (91.56%), Postives = 221/237 (93.25%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
MASKSC LLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSI P
Sbjct: 1 MASKSCHLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
Query: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
TIPPPQPPQTPPVSTPSLPPV PPPPV TPPPLPPPPATPPPLPPPLPAPQ
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPVFPPPPV----------TPPPLPPPPATPPPLPPPLPAPQ 120
Query: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
ISPTPLQ+APLPTPPTPVPS PMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA
Sbjct: 121 ISPTPLQVAPLPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
Query: 181 VPSPPAPPTVVDSQ-DSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF 237
VPSPPAPPTVVDSQ DSTAPAPSPNLNGGDPMKEKVG WAR+VLGFIIVVA+TAF+F
Sbjct: 181 VPSPPAPPTVVDSQDDSTAPAPSPNLNGGDPMKEKVGRWARVVLGFIIVVASTAFNF 227
BLAST of CmaCh04G020010 vs. ExPASy TrEMBL
Match:
A0A0A0LHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1)
HSP 1 Score: 248.4 bits (633), Expect = 2.9e-62
Identity = 168/241 (69.71%), Postives = 187/241 (77.59%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITI-----TPPPNVAA 60
MASKS VICLAFLF + +QAPAQPPSLPT +PPP+TPPPT+ TPPP V A
Sbjct: 15 MASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA 74
Query: 61 PSITPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLP-P 120
PS +PTIP PPQ+ PVSTPSLPP LPPPP TPPPL PPPLPPP +P PLP P
Sbjct: 75 PSTSPTIP---PPQSSPVSTPSLPPALPPPPATPPPL------PPPLPPPQVSPTPLPTP 134
Query: 121 PLPAPQISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQA 180
P+ AP ++P PLPTPPTP PS P APVA PE +PAPAPGKHKHRRRHKHKKHQA
Sbjct: 135 PVLAPTLAP-----LPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQA 194
Query: 181 PAPAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAF 236
PAPAP VPSPPAPPTVVDSQDSTAPAPSP+LNGGDP+K KVG W+++ LGFI +VATT F
Sbjct: 195 PAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIFLVATTGF 241
BLAST of CmaCh04G020010 vs. ExPASy TrEMBL
Match:
A0A1S3C506 (lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 PE=4 SV=1)
HSP 1 Score: 241.1 bits (614), Expect = 4.6e-60
Identity = 168/241 (69.71%), Postives = 184/241 (76.35%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITI-----TPPPNVAA 60
MASK VICLAFLF AI+QAPAQPPSLPT +PPPSTPPPT+ TPPP V A
Sbjct: 1 MASKLWSFSVICLAFLFSSAIAQAPAQPPSLPTVSPPPSTPPPTVPTPPPLSTPPPTVVA 60
Query: 61 PSITPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLP-P 120
PS +P IP PPQ+ PVSTPSLPP PPPP TPPPL PPPLPPP +P PLP P
Sbjct: 61 PSTSPAIP---PPQSSPVSTPSLPPAFPPPPATPPPL------PPPLPPPQVSPIPLPTP 120
Query: 121 PLPAPQISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQA 180
P+ AP ++P PLPT PTP PS P APVA PEL+PAPAPGKHKHRRRHKHKKHQA
Sbjct: 121 PVLAPTLAP-----LPLPTSPTPTPSPPTPAPVASPELSPAPAPGKHKHRRRHKHKKHQA 180
Query: 181 PAPAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAF 236
PAPAP VPSPPAPPTVVDSQDSTAPAPSP+L+ GDPMK KVGTW ++ LGFI +VATT F
Sbjct: 181 PAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLSRGDPMKGKVGTWTKVGLGFIFLVATTGF 227
BLAST of CmaCh04G020010 vs. ExPASy TrEMBL
Match:
A0A6J1DYJ7 (lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC111025417 PE=4 SV=1)
HSP 1 Score: 235.3 bits (599), Expect = 2.5e-58
Identity = 164/242 (67.77%), Postives = 183/242 (75.62%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPST------PPPTITITPPPNVA 60
MASKS P+LVI LAFLF AI QAPAQPPSLPT + PPST PP ++ TPPPNV
Sbjct: 1 MASKSWPVLVIWLAFLFYPAIGQAPAQPPSLPTTSSPPSTLAPTVATPPPLSSTPPPNVV 60
Query: 61 APSITPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPP 120
APS +PT+PPPQPPQ PVSTPSLPP LPPPP TPPPLPPPP P P P
Sbjct: 61 APSTSPTVPPPQPPQITPVSTPSLPPTLPPPPATPPPLPPPPQVSP--------TPAQAP 120
Query: 121 PLPAPQISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQA 180
+PAP ++P P APLP PPTP P+ APV VP +PAPAPGKH+H+R HKHKKH A
Sbjct: 121 SVPAPTLAPLPNPPAPLPPPPTPA---PVAAPVLVP--SPAPAPGKHRHKRHHKHKKHPA 180
Query: 181 PAPAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAF 237
PAPAP +PSPPAPPTVVDSQDSTAPAPSPNLNGGDPM+ KV TW R+VLGFII+VATT+
Sbjct: 181 PAPAPTMPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMEGKVRTWTRVVLGFIILVATTSL 229
BLAST of CmaCh04G020010 vs. NCBI nr
Match:
XP_022974214.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita maxima])
HSP 1 Score: 398.7 bits (1023), Expect = 3.6e-107
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP
Sbjct: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
Query: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
Query: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA
Sbjct: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
Query: 181 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF 237
VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF
Sbjct: 181 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF 236
BLAST of CmaCh04G020010 vs. NCBI nr
Match:
XP_023514677.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 365.2 bits (936), Expect = 4.4e-97
Identity = 220/237 (92.83%), Postives = 223/237 (94.09%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP
Sbjct: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
Query: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
TIPPPQPPQTPPVSTPSLPP LPPPPV TPPPLPPPPATPPPLPPPLPAPQ
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPALPPPPV----------TPPPLPPPPATPPPLPPPLPAPQ 120
Query: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
ISPTPLQ+APLPTPPTPVPS PMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA
Sbjct: 121 ISPTPLQVAPLPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
Query: 181 VPSPPAPPTVVDSQ-DSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF 237
VPSPPAPPTVVDSQ DSTAPAPSPNLNGGDPMK+KVGTWARIVLGFIIVVATT F+F
Sbjct: 181 VPSPPAPPTVVDSQDDSTAPAPSPNLNGGDPMKQKVGTWARIVLGFIIVVATTPFNF 227
BLAST of CmaCh04G020010 vs. NCBI nr
Match:
XP_022930065.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita moschata])
HSP 1 Score: 358.6 bits (919), Expect = 4.1e-95
Identity = 217/237 (91.56%), Postives = 221/237 (93.25%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
MASKSC LLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSI P
Sbjct: 1 MASKSCHLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
Query: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
TIPPPQPPQTPPVSTPSLPPV PPPPV TPPPLPPPPATPPPLPPPLPAPQ
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPVFPPPPV----------TPPPLPPPPATPPPLPPPLPAPQ 120
Query: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
ISPTPLQ+APLPTPPTPVPS PMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA
Sbjct: 121 ISPTPLQVAPLPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
Query: 181 VPSPPAPPTVVDSQ-DSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFHF 237
VPSPPAPPTVVDSQ DSTAPAPSPNLNGGDPMKEKVG WAR+VLGFIIVVA+TAF+F
Sbjct: 181 VPSPPAPPTVVDSQDDSTAPAPSPNLNGGDPMKEKVGRWARVVLGFIIVVASTAFNF 227
BLAST of CmaCh04G020010 vs. NCBI nr
Match:
KAG6601764.1 (hypothetical protein SDJN03_06997, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 308.1 bits (788), Expect = 6.4e-80
Identity = 191/206 (92.72%), Postives = 194/206 (94.17%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSI P
Sbjct: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
Query: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
TIPPPQPPQTPPVSTPSLPPVLPPPPV TPPPLPPPPATPPPLPPPLPAPQ
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPV----------TPPPLPPPPATPPPLPPPLPAPQ 120
Query: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
ISPTPLQ+APLPTPPTPVPS+PMLAPVAVPELAPAPAPGKHKHRRRHKHKKH+APAPAPA
Sbjct: 121 ISPTPLQVAPLPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPA 180
Query: 181 VPSPPAPPTVVDSQ-DSTAPAPSPNL 206
VPSPPAPPTVVDSQ DSTAPAPSPNL
Sbjct: 181 VPSPPAPPTVVDSQDDSTAPAPSPNL 196
BLAST of CmaCh04G020010 vs. NCBI nr
Match:
XP_038875574.1 (lysine-rich arabinogalactan protein 19-like [Benincasa hispida])
HSP 1 Score: 258.1 bits (658), Expect = 7.5e-65
Identity = 174/242 (71.90%), Postives = 188/242 (77.69%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITI-----TPPPNVAA 60
MASKS P VICL FLFP AI QAP QPP+LPT +PPPSTPPPT+T TPPP V A
Sbjct: 1 MASKSWPFSVICLGFLFPFAIGQAPVQPPTLPTVSPPPSTPPPTVTTPPPLSTPPPTVVA 60
Query: 61 PSITPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATP-PPLPP 120
PS +PTIPPPQ PP+STPSLPP LPPPP TPPPL PPPLPPP +P P P
Sbjct: 61 PSTSPTIPPPQ----PPISTPSLPPALPPPPATPPPL------PPPLPPPQVSPTPSQAP 120
Query: 121 PLPAPQISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQA 180
P+PAP +APL TPPTP+PS P AP+AVPELAPAPAPGKHKHRR HKHKKHQA
Sbjct: 121 PVPAP-------TLAPLLTPPTPMPSPPTPAPIAVPELAPAPAPGKHKHRRHHKHKKHQA 180
Query: 181 PAPAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAF 237
PAPAP VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMK KV T +R+VLGFI +VATT F
Sbjct: 181 PAPAPTVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVETCSRVVLGFIFLVATTGF 225
BLAST of CmaCh04G020010 vs. TAIR 10
Match:
AT1G68725.1 (arabinogalactan protein 19 )
HSP 1 Score: 83.2 bits (204), Expect = 3.1e-16
Identity = 103/239 (43.10%), Postives = 126/239 (52.72%), Query Frame = 0
Query: 8 LLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITPTIPPPQP 67
LL L F + A P + T PPP+T P T PPP P ++ PP P
Sbjct: 11 LLASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASP 70
Query: 68 PQTPPVSTPSLPPVLPPPPV----TPPPLPP--PPATPPPLPPPPATPPPLPPPLPAPQI 127
PP TP+ PP PV TPPP PP PPA+ P + PPP +PPP P P
Sbjct: 71 VTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPA 130
Query: 128 SPTPLQIAPLPTPPTPVPSRPMLAPVAVP---ELAPAPAPGKHKHRRRHKHKK-HQAPAP 187
SP P +P P P +P P+ PV P L PAPAP KH+R+HKHK+ H APAP
Sbjct: 131 SPPPAPASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRKHKHKRHHHAPAP 190
Query: 188 APAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVG---TWARIVLGFIIVVATTA 234
AP PSPP+PP + D QD TAPAPSPN NGG+ + + G W L + ++A TA
Sbjct: 191 APIPPSPPSPPVLTDPQD-TAPAPSPNTNGGNALNQLKGRAVMWLNTGLVILFLLAMTA 248
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9S740 | 4.4e-15 | 43.10 | Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1IGY8 | 1.7e-107 | 100.00 | lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A6J1EVZ4 | 2.0e-95 | 91.56 | lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
A0A0A0LHJ4 | 2.9e-62 | 69.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1 | [more] |
A0A1S3C506 | 4.6e-60 | 69.71 | lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 P... | [more] |
A0A6J1DYJ7 | 2.5e-58 | 67.77 | lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC1110... | [more] |
Match Name | E-value | Identity | Description | |
XP_022974214.1 | 3.6e-107 | 100.00 | lysine-rich arabinogalactan protein 19-like [Cucurbita maxima] | [more] |
XP_023514677.1 | 4.4e-97 | 92.83 | lysine-rich arabinogalactan protein 19-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022930065.1 | 4.1e-95 | 91.56 | lysine-rich arabinogalactan protein 19-like [Cucurbita moschata] | [more] |
KAG6601764.1 | 6.4e-80 | 92.72 | hypothetical protein SDJN03_06997, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_038875574.1 | 7.5e-65 | 71.90 | lysine-rich arabinogalactan protein 19-like [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
AT1G68725.1 | 3.1e-16 | 43.10 | arabinogalactan protein 19 | [more] |