CmaCh04G019640 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G019640
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionPhotosystem II protein D1
LocationCma_Chr04: 11023927 .. 11032723 (+)
RNA-Seq ExpressionCmaCh04G019640
SyntenyCmaCh04G019640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATGGAAGTTATGTATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTACTGTTGAAGTTACATCTATCAATGGATAAGACTGATTTCTGTCTTAGTGTATACAAGTTCTTTCAAGTAAAGGAGCAATAACCAATTTCTTGTTTTCTCAAGAGGATTCAAAGATTGATTTTTCTTGTTCTCGGGCTATGGGCATTTGACTGCCCAAGGTAATTGAGAGAAATTAGATAGAGTCGTTTTGATCAGCGACGAATAGGCTTTGAGGCCTTTCGTTAGCTAACTAATAAAGATTCTTTCTGATCGATCTTGTAGATATATTCCGTCTACGTGTAAAACTGAGAGGCAAGACCGATTCTTATAAACAGTTTCAGGTCTATTCTCCTTTAGGCTTTGAAAGGTCTTAATTTGCATATTCAGAAAGAAACTAGCTCTGGAATGTAGGGCTCTTCAGTTGGATCATTAGAAGCGAGTTGCCACTTTCTTCCTACTAGCTCTAGTCTCTTTTTCCTCTGCTTCAAGTTCTAATTCGAGTTCTAAGGGGAAGCGAATGGTCGGGGTTGCTAGGCTTGCCAAAGCTACGAACTAGGTCGGCCGATAGGCAAAGTTGGTCTTTGGGTTAGGGTGTTGAAAGCAAAAGACAAGGTTTTAGATACTGGCCTTCCTATGGTTGAGTGGGATTCCTACAAAGGGAAGATGTTGTCTTATTCGTTCAAGTGCCTGGTGAAAGCACTTTCCTGGTTGAAGGACGGGTTGTAGTGGGGGATGGAGCTTCTGCCAATTTTTAGACGGATCGCTGGCTTGATGTGCCGGTAGTGGATATGCTTGATAATTTGCCTCAATATTTGGATCTTACAACAAAAATACAAGAGTTGATTCTTGAACCAGGTGTGTGGAATTCGGCAAAGCTTAAGGAGTATGTGCCCACTGACGTTGTTGCAAACGTTGTTGGGTACCCTTTATTTAGCAGGGTTTGTGAGTACAAAAGACAGCGTCTTCTGGAGACATACATCCTTGGGGATCTTTACTTCAAGGTCAGCTTATAGAGCCTTGCAAGATGGTGAAGCTGGACAAAGCTCATATGACTTCTCTTGGGTATGGAAATTGAAGATTCCAAATGGAGCTATTTTATTTGGCTTGCATTGAGGGATAGATTACCAACTAATAGTCTTAGACACTGTTGGGGAATGGATGGAAATGGTGCATGCAAGCAGTGTCCGAGAGAGATGGAAACTGTAATACATGTGCTAAGAGACTGCCGTGTATCAAGGGATATCTGGAACTCATTGAGGTCAGATTTACAGGACACTTCTTTCTTTTCTCTTCCTCTTAGGGAGTGGCTGAAAGAAAATGCATATGAGTCTAAAGATGGCTACTGGAAAACTTTGTTTGTTGTAACGTGCTGGCGTATTTGGACAAGAAGGTGTCGTGTGGTCTTCAATGAGGACGTGGATGAAGAGAAAGACGTGGGACTTCTCAGAAATATCAGACTGACTACTATGGAGGTGGTAAGTGCTTTATCAGGTACACAGCCTGCTATGGCGGACGATAGGCTGATAAGTTGGCAGCCACCGAATGGAAGCGCAGTCAGGCTTAACTTAACACGGACGGAGCTTCACATGGAAATCCTGGAATCTCAGGAGCTGGTGGCCTTATTCGAGCTGTAGATGGGAAATGGTTGATGGGTTTTCAAGCTTGCATGGGGTTTTGTTCAAATAATGTGGCTGAGATGCAAGCTTTACGATTGAGATTGTTATTGGCATGGGGCTTGGGCTTTAGAGATGTCCAATGTAGTGTTGACTCCAAGGTGGTAGTAGATTTGATTGCTGATGCTGATACACGGTTTAATCCTCATGGGAATCTCATTGAAGATGTTCGTGCTATTATGAGAAGGTAATGGTCCTGTACCCTGCATCACACTCTCCGAGAAGGAAATTTCTGCGCTGATTTTCTTGCGCTGTTACATTGGGTCAGAATGAAAGGTTCTCCATTCCCCACCGGCGGAAATACTCTCTTGATGGCTGATGCTCAAGTGCCTTCCCAAGAGGCTTTCAATTGTAATCGTTTTTGCTTTCCTTTGATCGGAACTATTATCTATCACCACTGAGTAAGGAATCAAAGTTACGGGTATAAGTGGAAGGCGAAGTCAGGTTATAGCTACGCAGCGAAGAAAGGAGGTGATCAGTACCCGTAGCGTAGCGACGAAGAAGATGATCATTTATTTAGTAGGCGAACAGTCGAAGAACCACTCTAACGAAGAATGGAGCTACTTCGTAAGGAATAGGAATCAGGCTTTGGTTTCACAAATTAATGCCAGTTTCTTTATCGGTCAGAGATGAATCTAAATCAATTTCATATTCGTAAGAGTTCGTAAGAGAAAGAGCGAAGTAGGAAAGATCAGAAGATTCAGAGTAGACTCCTTCTTCCGACCTATATATAATAGAATTCGTTTAGCAATCCTTCGGCGAGCTTTCCTGCAGGTTTAAAGCTTCTGTTCGCCTACTATCAATTACACATTCGTATCTGCTGAGAAATAGAATAGGCTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACAAAAATACAAGAGTTGATTCTTGAACCAGGTGTGTGGAATTCGGCAAAGCTTAAGGAGTATGTGCCCACTGACGTTGTTGCAAACGTTGTTGGGTACCCTTTATTTAGCAGGGTTTGTGAGTACAAAAGACAGCGTCTTCTGGAGACATACATCCTTGGGGATCTTTACTTCAAGGTCAGCTTATAGAGCCTTGCAAGATGGTGAAGCTGGACAAAGCTCATATGACTTCTCTTGGGTATGGAAATTGAAGATTCCAAATGGAGCTATTTTATTTGGCTTGCATTGAGGGATAGATTACCAACTAATAGTCTTAGACACTGTTGGGGAATGGATGGAAATGGTGCATGCAAGCAGTGTCCGAGAGAGATGGAAACTGTAATACATGTGCTAAGAGACTGCCGTGTATCAAGGGATATCTGGAACTCATTGAGGTCAGATTTACAGGACACTTCTTTCTTTTCTCTTCCTCTTAGGGAGTGGCTGAAAGAAAATGCATATGAGTCTAAAGATGGCTACTGGAAAACTTTGTTTGTTGTAACGTGCTGGCGTATTTGGACAAGAAGGTGTCGTGTGGTCTTCAATGAGGACGTGGATGAAAAGAAAGACATGGGACTTCTCAGAAATATCAGACTGACTACTATGGAGGTGGTAAGTGCTTTATCAGGTACACAGCCTGCTATGGCGGACGATAGGCTGATACTTGCAGCCACCGAATGGAAGCGCAGTCAGGCTTAACTTAACACGGACGGAGCTTCACATGGAAATCCTGGAATCTCAGGAGCTGGTGGCCTTATTCGAGCTGTAGATGGGAAATGGTTGATGGGTTTTCAAGCTTGCATGGGGTTTTGTTCAAATAATGTGGCTGAGATGCAAGCTTTACGATTGAGATTGTTATTGGCATGGGGCTTGGGCTTTAGAGATGTCCAATGTAGTGTTGACTCCAAGGTGGTAGTAGATTTGATTGCTGATGCTGATACACGGTTTAATCCTCATGGGAATCTCATTGAAGATGTTCGTGCTATTATGAGAAGGTAATGGTCCTGTACCCTGCATCACACTCTCCGAGAAGGAAATTTCTGCGCTGATTTTCTTGCGCTGTTACATTGGGTCAGAATGAAAGGTTCTCCATTCCCCACCGGCGGAAATACTCTCTTGATGGCTGATGCTCAAGTGCCTTCCCAAGAGGCTTTCAATTGTAATCGTTTTTGCTTTCCTTTGATCGGAACTATTATCTATCACCACTGAGTAAGGAATCAAAGTTACGGGTATAAGTGGAAGGCGAAGTCAGGTTATAGCTACGCAGCGAAGAAAGGAGGTGATCAGTACCCGTAGCGTAGCGACGAAGAAGATGATCATTTATTTAGTAGGCGAACAGTCGAAGAACCACTCTAACGAAGAATGGAGCTACTTCGTAAGGAATAGGAATCAGGCTTTGGTTTCACAAATTAATGCCAGTTTCTTTATCGGTCAGAGATGAATCTAAATCAATTTCATATTCGTAAGAGTTCGTAAGAGAAAGAGCGAAGTAGGAAAGATCAGAAGATTCAGAGTAGACTCCTTCTTCCGACCTATATATAATAGAATTCGTTTAGCAATCCTTCGGCGAGCTTTCCTGCAGGTTTAAAGCTTCTGTTCGCCTACTATCAATTACACATTCGTATCTGCTGAGAAATAGAATAGGCTTTTTTAGCTCATTTCTCAGTCACCTGATTTGGCACCAGCCAAAGGAGTACTGTTCATATTTCGGCTAGTGACGGGGGTGTGATCAAGTCAAAGACTTAGCGCTAAAGCACCTTCGCTCCTATCCTTTAAGTCGACTCTAGTGGACTCTGAGCTTATAAGTCGGTTCGAATAAAAGCCTGTCAGAGAATTGTCAAAAGTCAGATTTTCCCAGAAGTTGCCGATCGAGGATAATGCAATGAGGTGTTTTCTAATGTAATGATCATTCCAAGATTTCCAATATTTAAATAGAAGTACAATCTACTAAAAGAGTCAGAACACTAGTGAACCAGTCTTGAGAATTGGGACTTGGATCCTTCGTAAAGAAGAACAAGCGAAACGATACCTAGATTCGGCTGGGAAACAACAATGTTGCTTAGGTTACATTGGAAATAAGTACTAAATGAAACCATTTTCTTCTATTTTCCACTAAGTCAGCTTGCCCCATGAGACAATGGACGCTTTCCATTCCTTCCTCTTTTTCTTGCTTAGTTGGCTACTCTCATCCCTGAATTCAAGTGTGTTGGCCTAGGTTCTTGGCTGCACAACCTCACATGCTCTATGGACTTCCCTAGAAGAGGGTGTTTGCTTCTATCTAAGTCAAGAGCAAGAATATTGAAACTTCGCCTTCTATTAGAGACCAAAAAGAAAGAAAGGCTCTATCTCAATGACGGATTATCTCCAAAAAGAAAAAGCATCGCGAATAATCTATCTGCAATCTTCGTGAACTCTCAGAATAATGGTCGTAGATGTGGTCGTGGACGTGGTAACTCTGTTCTTGGCCACCTCCCTCCTCCTTTCTTTCTATGCTCCTCAAGGCTCTGATCAAGACCTTTGCCTGCTCCGGTGTAGTGTAAGCTATGTTTTCAATTCTTTCATACTGCTCGCGAATGTCAACAGCATAAGAAGCAAGCCTTTTATACAGATCAGTTCTCTCTCCCAAGGTCAATCTCTTTTTGAAGTTTGAAGGTGGAGTTTCCATTCCGAAGTTTACATATACGGATCAACTGCTCTCGGCTCGGAGAAGTTCATGCTTGATCATGCTTGATCTGAACGCCCTTACGAGGTAGTTGGGTTGGAGGATGAAAGCCGTTTTTTTCTTGCAGGACTACAAAAGAGAGGTAATTCTCTAAAAAAGAACAGAAAGGAATGACTATCTATAAAGAGAGAGGCTTGCACAGACATCCCGAGGGTAAAGAAAGAGATTAGACAGACCGTCCCTTTGAACTCAAACAAAGATCAGACGTCGATTAGCCAAGAATCTCAATCGAAAGTAAGATCTTCTTCCAACAGTTCTCTCTTTCTCTTTTAGTCACAGAAAGCACATCTAAAGAGAAGAAAAAGAAAGTAAGATGAATCTAGTATAGTCAGACTCTTTTTCGTTTTCTATTGTCGGTATCCTAAGATCTCTTGACTAAGTCATTTCACACTAAGCACTGAGAACAAGGGACTGATCCCGTACCGTGCTACTGCCTTGATCTAGGATTAGGATTTCATTTTCTTTCTACGTTTTTTCACATCTGCTTCCGCAGAATCTTTTTCAAGATCTGTTTTTTGGTTTGATAAAACTGAGCCACGATTCTTTTCGTCCACAACTTCCTTTTTTCCTTTATTTCCATTTTCGAATTCAAGAGGTTTTTTCTTCGCTGATATTAAAGGAGATCCTTTTTTCTTTCCAATTCGTTTTTCATTTTCTCGACTGTAAAGGACAGGTGAATGAGCGAAGCAAGCAGTGAGACCAATAGAATAGGTGAAGGAGCGAAGACGCTCGAACATCCTTTAATTTTCTTTGACCTTGTGTTGAAATAAATAGGGAGAGGACAGAAGGAGAATGAATCTTGAGTCTTGACTTGCAAATTACCTAAAAAATGAAACTTGACAGTTATATGGAGAATGAAATGAAAGATGAATGAGACTGAACAGGAAGGAAAGAATAGAAATGAAACTTGACAGTGATAGGGAATGAAAGATTCATTCTTGATCTTCTCCTTCCCCTATGGATTCTTGAACTGTAAAAGATCAATACTCATTCACCTTCTTTCACTCTTTTCCCTGTAAAGACCATGAATTCTAAAATGCTATCCTCTGTCTATTTTTTGGGATAAAACCCCTGATTTCTCAAGATTTTATGCCATTTTTGGACATTTTCCCGGTATTTAGGGCCATTTTCCCTGATTTCACTCTTTTTCGTGTAAAGATCATTAATTTTGAAAATCTATCCTTTGTCTATTTTTTGGGATATTTTTTAGTATAGGTAATTAACTATTAAGTCAAGACTCAACAAGAAGAAATGAATTAGCTGCTTTCCTCCCCTTCACCTTTAATGAGCGAAAGAGAAAGAAAAGAAAGAAAAGAGACCAATAGAATAGAATAGGTTAAATCACGGACAGGATTGAATATGCTTTAGTGAAATCAGTCTTTCATATGCTTAACTAGAAACGAACTCCAGGGACAGGAAAGAAAAGAGACCGAGGTTACAGTGTTTGAACGGAGAAGAGAAAGAAAGAGAAGCGACTGAATCGATATGACCTTGCCTTATTTTATGACCTTGCCTTATTTCAGGAGGTAAAGCTAGAAGAAGAAGATATTCCTTCGGCTAAACCTTCCCCAATATTACCTGACCGGAGTGATTGAAGGAGGTAAACTCGGCGAGCAGCTTCGCACCTTTCGGATGAATTATCCTGTAAAGACCATTAATCAAAAAACTCTATCTTCTGTCTATTTTTTGGGATATTTTAGGCCGAGGTAATGCAGAAGTCAAGACTCAACTCTCGATGAATTATCCTTCAACTTGTCCTTGATTGAACTCGGTAAAGCAGCTTCTCTCCTGAACTTATTTATTCACTGTAAAGTGGCTTCGCCCCTGAACCTGATGTCCCTTCCCTATTTATTCCTTCAAACACGAGGTAAAGAAGTCGCTAATTCATTGACTATCCCTTCACTATCAAAGAAAGAAAAGATAATTGATTGAAGAAGAAAATTCAAGCAAAAGATTGAAAAGAAGAAGAACCCAAAAAAGAGCTACTTCACCTTCAGCTATTTCTTCTTGAACTATAAACAAGGATCAATACTCCTATTTATTCATTCTCCTGAACCTCGTAAACAAGGAAAGACTCAAGATTAATGAGACTGAACTCGCATATTCAATCCTTCACTCCTGAACCTATCGGTTTCACAAGCACTAAGTTTAAGTCAGTTCTTCCCCTTCACCTTTACAACTCGGTTTCACAATTCCATTGCCTGCCCCGATATTACCTGACCTGATTGAAGGGTAAAGGTATTTTACCATCTCTTTGCTTTCCTTTGATTCTGCTTGAAAGACTCTTCAAATGAAAGAAAGATTTGCTCCTGAACCTGATTTCACTCCTTCCTTCACCTTTACAGGGAACAAAAGAATAAGACTTCAAAGACTCGGTAAAACTATTAACCTAAACCTCTATTACCTTCAGTTATGGTTCGTTATTCTCAGTTATTGTGAGTTATTATCAGTTCTAGTTTGTTATTCTTTCACAAGGTAAATAGGTGAAGTAGCTTTTTCTTTTCTTTCACTCGGTCTCGCTATTTTCTTGTCCTTTACAGTCTCAAATATTCAATCCTCTCCTCTTCTCTTCTCGTCTCACAGCTTCTCTCCTCGCTTTTGTTCAATTATAAATAAATAACCATTTTGATGGAGATTTGTAGCATCATTCAAGTAAATACAGATTGAGATCGTAG

mRNA sequence

ATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATGGAAGTTATGTATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTACTGTTGAACATCATTCAAGTAAATACAGATTGAGATCGTAG

Coding sequence (CDS)

ATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATGGAAGTTATGTATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTACTGTTGAACATCATTCAAGTAAATACAGATTGAGATCGTAG

Protein sequence

MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVEHHSSKYRLRS
Homology
[Close]
BLAST of CmaCh04G019640 vs. ExPASy Swiss-Prot
Match: P56318 (Photosystem II protein D1 OS=Chlorella vulgaris OX=3077 GN=psbA PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.0e-82
Identity = 156/165 (94.55%), Postives = 157/165 (95.15%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA VE
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAVVE 347

[Close]
BLAST of CmaCh04G019640 vs. ExPASy Swiss-Prot
Match: P05337 (Photosystem II protein D1 OS=Hordeum vulgare OX=4513 GN=psbA PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.0e-82
Identity = 156/165 (94.55%), Postives = 157/165 (95.15%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA VE
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE 347

[Close]
BLAST of CmaCh04G019640 vs. ExPASy Swiss-Prot
Match: P10510 (Photosystem II protein D1 OS=Secale cereale OX=4550 GN=psbA PE=1 SV=3)

HSP 1 Score: 307.4 bits (786), Expect = 1.0e-82
Identity = 156/165 (94.55%), Postives = 157/165 (95.15%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA VE
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE 347

[Close]
BLAST of CmaCh04G019640 vs. ExPASy Swiss-Prot
Match: P12463 (Photosystem II protein D1 OS=Triticum aestivum OX=4565 GN=psbA PE=3 SV=2)

HSP 1 Score: 307.4 bits (786), Expect = 1.0e-82
Identity = 156/165 (94.55%), Postives = 157/165 (95.15%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA VE
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE 347

[Close]
BLAST of CmaCh04G019640 vs. ExPASy Swiss-Prot
Match: Q1KVU8 (Photosystem II protein D1 OS=Tetradesmus obliquus OX=3088 GN=psbA PE=1 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.3e-82
Identity = 155/165 (93.94%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRV+NTWADIINRANLGMEVM+ERNAHNFPLDLA+VE
Sbjct: 303 NQSVVDSQGRVLNTWADIINRANLGMEVMHERNAHNFPLDLASVE 347

[Close]
BLAST of CmaCh04G019640 vs. ExPASy TrEMBL
Match: A0A286R0D8 (Photosystem II protein D1 OS=Echinacanthus lofouensis OX=2029165 GN=psbA PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLAT+E
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATIE 347

[Close]
BLAST of CmaCh04G019640 vs. ExPASy TrEMBL
Match: A0A385NGD6 (Photosystem II protein D1 OS=Echinacanthus longzhouensis OX=2079031 GN=psbA PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLAT+E
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATIE 347

[Close]
BLAST of CmaCh04G019640 vs. ExPASy TrEMBL
Match: A0A385NG75 (Photosystem II protein D1 OS=Echinacanthus longipes OX=1279188 GN=psbA PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLAT+E
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATIE 347

[Close]
BLAST of CmaCh04G019640 vs. ExPASy TrEMBL
Match: B7T3C5 (Photosystem II protein D1 OS=Geranium macrorrhizum OX=28963 GN=psbA PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.2e-80
Identity = 157/168 (93.45%), Postives = 159/168 (94.64%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVEHHS 162
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLATVE  S
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATVEVQS 350

[Close]
BLAST of CmaCh04G019640 vs. ExPASy TrEMBL
Match: D5MAN5 (Photosystem II protein D1 OS=Lathyrus sativus OX=3860 GN=psbA PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.2e-80
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLATVE
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATVE 347

[Close]
BLAST of CmaCh04G019640 vs. NCBI nr
Match: YP_009428058.1 (photosystem II protein D1 [Echinacanthus lofouensis] >YP_009532423.1 photosystem II protein D1 [Echinacanthus longipes] >ASV47945.1 photosystem II protein D1 [Echinacanthus lofouensis] >AYA72797.1 photosystem II protein D1 [Echinacanthus longipes])

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLAT+E
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATIE 347

[Close]
BLAST of CmaCh04G019640 vs. NCBI nr
Match: YP_009527389.1 (photosystem II protein D1 [Echinacanthus longzhouensis] >AYA72884.1 photosystem II protein D1 [Echinacanthus longzhouensis])

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLAT+E
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATIE 347

[Close]
BLAST of CmaCh04G019640 vs. NCBI nr
Match: YP_010146133.1 (photosystem II protein D1 [Euonymus maackii] >QQO81024.1 photosystem II protein D1 [Euonymus maackii] >QVX31331.1 photosystem II protein D1 [Euonymus maackii])

HSP 1 Score: 308.1 bits (788), Expect = 4.5e-80
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLATVE
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATVE 347

[Close]
BLAST of CmaCh04G019640 vs. NCBI nr
Match: QFQ40473.1 (photosystem II protein D1 [Phyllagathis velutina] >QFQ43244.1 photosystem II protein D1 [Bredia esquirolii])

HSP 1 Score: 308.1 bits (788), Expect = 4.5e-80
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLATVE
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATVE 347

[Close]
BLAST of CmaCh04G019640 vs. NCBI nr
Match: QMS49634.1 (photosystem II protein D1 [Lindera erythrocarpa])

HSP 1 Score: 308.1 bits (788), Expect = 4.5e-80
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 189 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 248

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 249 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 308

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLATVE
Sbjct: 309 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATVE 353

[Close]
BLAST of CmaCh04G019640 vs. TAIR 10
Match: ATCG00020.1 (photosystem II reaction center protein A )

HSP 1 Score: 306.2 bits (783), Expect = 1.6e-83
Identity = 156/169 (92.31%), Postives = 159/169 (94.08%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVEHHSS 163
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA VE  S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPST 351

[Close]
BLAST of CmaCh04G019640 vs. TAIR 10
Match: ATCG00270.1 (photosystem II reaction center protein D )

HSP 1 Score: 73.2 bits (178), Expect = 2.3e-13
Identity = 44/130 (33.85%), Postives = 70/130 (53.85%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           ++ FQ  HN  ++PFHM+GVAGV G +L  A+HG+ V ++L  E  +  +    +   Q 
Sbjct: 183 ILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQA 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGISTMAFNLNGFNFNQSVVDS 120
           EETY++V A+ ++ ++     +F+N R LHFF+   PV G+   A  + G   N    D 
Sbjct: 243 EETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 302

Query: 121 QGRVINTWAD 131
             + I    D
Sbjct: 303 VSQEIRAAED 309

The following BLAST results are available for this feature:
BLAST of CmaCh04G019640 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P563181.0e-8294.55Photosystem II protein D1 OS=Chlorella vulgaris OX=3077 GN=psbA PE=3 SV=1[more]
P053371.0e-8294.55Photosystem II protein D1 OS=Hordeum vulgare OX=4513 GN=psbA PE=3 SV=1[more]
P105101.0e-8294.55Photosystem II protein D1 OS=Secale cereale OX=4550 GN=psbA PE=1 SV=3[more]
P124631.0e-8294.55Photosystem II protein D1 OS=Triticum aestivum OX=4565 GN=psbA PE=3 SV=2[more]
Q1KVU81.3e-8293.94Photosystem II protein D1 OS=Tetradesmus obliquus OX=3088 GN=psbA PE=1 SV=1[more]
BLAST of CmaCh04G019640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A286R0D81.3e-8094.55Photosystem II protein D1 OS=Echinacanthus lofouensis OX=2029165 GN=psbA PE=3 SV... [more]
A0A385NGD61.3e-8094.55Photosystem II protein D1 OS=Echinacanthus longzhouensis OX=2079031 GN=psbA PE=3... [more]
A0A385NG751.3e-8094.55Photosystem II protein D1 OS=Echinacanthus longipes OX=1279188 GN=psbA PE=3 SV=1[more]
B7T3C52.2e-8093.45Photosystem II protein D1 OS=Geranium macrorrhizum OX=28963 GN=psbA PE=3 SV=1[more]
D5MAN52.2e-8094.55Photosystem II protein D1 OS=Lathyrus sativus OX=3860 GN=psbA PE=3 SV=1[more]
BLAST of CmaCh04G019640 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009428058.12.7e-8094.55photosystem II protein D1 [Echinacanthus lofouensis] >YP_009532423.1 photosystem... [more]
YP_009527389.12.7e-8094.55photosystem II protein D1 [Echinacanthus longzhouensis] >AYA72884.1 photosystem ... [more]
YP_010146133.14.5e-8094.55photosystem II protein D1 [Euonymus maackii] >QQO81024.1 photosystem II protein ... [more]
QFQ40473.14.5e-8094.55photosystem II protein D1 [Phyllagathis velutina] >QFQ43244.1 photosystem II pro... [more]
QMS49634.14.5e-8094.55photosystem II protein D1 [Lindera erythrocarpa][more]
BLAST of CmaCh04G019640 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00020.11.6e-8392.31photosystem II reaction center protein A [more]
ATCG00270.12.3e-1333.85photosystem II reaction center protein D [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036854Photosystem II protein D1/D2 superfamilyGENE3D1.20.85.10coord: 1..120
e-value: 2.9E-17
score: 64.8
IPR036854Photosystem II protein D1/D2 superfamilySUPERFAMILY81483Bacterial photosystem II reaction centre, L and M subunitscoord: 1..154
IPR000484Photosynthetic reaction centre, L/MPFAMPF00124Photo_RCcoord: 1..138
e-value: 1.5E-33
score: 116.1
IPR000484Photosynthetic reaction centre, L/MPANTHERPTHR33149PHOTOSYSTEM II PROTEIN D1coord: 1..140
IPR000484Photosynthetic reaction centre, L/MPROSITEPS00244REACTION_CENTERcoord: 9..35
NoneNo IPR availablePANTHERPTHR33149:SF30PHOTOSYNTHETIC REACTION CENTRE, L/M-RELATEDcoord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G019640.1CmaCh04G019640.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009772 photosynthetic electron transport in photosystem II
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0009635 response to herbicide
biological_process GO:0019684 photosynthesis, light reaction
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009523 photosystem II
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
molecular_function GO:0010242 oxygen evolving activity