CmaCh04G018180 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATATTCCAAGTCTTTCAAGTGGAAGGGAATTGGCCTCTACAAGTCGGGTCTTCCTTTTCTTCTTATACCACTTCTTCAAATTAAAGCAACCTCTCCATTGGCTTGGCTGTGTGGCGGGGCTGGCGGCGGGGCAGTCTTATTTGCTGCAACCATAACCAAATCCTGTGTGGATTAGGCCTTATTATCGAGTCCTATGTGGATTAGGCTTTTTAAGTTTCGTGCACGATTAATTATCTTAATTAAGTATGTGTGTTATTTATTCGAATTTCAAATTTGTGTTTAATTGGTGGAAATTAGATAAACATTAAAATTTTGACTCAGTCTTTGGATGCCTAGGATCACACCCATTAAGGAAATAAAAATAATCTTAAATTTTTCTATTTTTTCTTTTTCATTCCAATCAAATATTTTACTTTATAACATTATATTATGATATTATATTATGATTTGTGGGTAAATTTTGTTATTTGGTCTCTCAAGTTTTACATCAAGTTCTCGCTTTATATTCAAAACGGTTCATAACATTAATTTAATAGAATGTTGACTTAGTCGTTATATTGATATAGAAGAGACACCATGTTAATTGTATTCGATTACTTGTCTAGTAGTTGTTAATGTTGCAACTTGATTAATTTATGATGGTTTAATTAATATTTTTTTAGGTTAAAGTCAAGTTAGGGTTCATTTAGAAAAATTTAGGGATTAAAATACCAATTTTAAAATTTTAGGGACTAAAATTAAATATATTTTAATTATTAAACTATATTTATGTTCTTTCTTTAATATATTTTTATTTTACAAAGTGGGTTTAGAATTATTATTATTATTTTTAATTTGGAGAAAATTTGAACTTCTAATTTTTTTTTTTTTTTATCAGCCTGTGAAAAGTATTTTTAAATGGGTATAACTTAATAATAAGATTAAATTTGGATTAAAATTTCTTTTAGCTTTGAGATTTAATAAATAATTAAATATTTAATTTTGTATCTGTTGGTAAATTTGAAAATTAAAAAATAAAAAATAAAAAATAAACTTTGGGATAAAAAGAGCATATTCGAGGGAACGGCATATTCAATATTTGGGTTTGGAGAGAAATTGGAGATCCAATTGGAACGGGTAAGAGAGAGAAAGAGCGGAAAGCGTTGGTTGAATAAGAACGTAGAAAAAGAACCCACCAAATTGAAGCTGCCCGATTTCCAACTAACCATTTCTCTCTGTAATTACAACAAAATCCGAAGAACAATCCCATTCTTTCTGTAATAACAACAAGAATTTGAATTTACCCACCAGAATTGAGAACAATTTCGTCTGCGAAGCCGATTGAATCGAGGAATGGGTCATGTGACGGCTTCATCAGGTTCGTCGATCAACGGGCCTCCTTCTAGGGCGCCGTCCTCCTTTTCATCTACGGCTTTTACGAATTTCCCTCTCATTTCTGCTCTCATTTCTTTCGCGGTTGCCCAGTTCATCAAGTTCTTCACCTCCTGGTATTTTCTCATTTCCTTCGGATCCGATTCAATTCTTAGGTTTTCACTGCATATGAATATCGTACGAGCGTTCTTGTTTGTTATGATAACCGATGTTCCCATGAAATCTGGATTCTGTTTTTCTTCCTTAAGACTTGATCACGGCATTGAAGAACCAATCAATTTCTTGTTACATTTCAGGTATAAGGAACGACGATGGGATTTTAAGAGACTAGTTGGATCGGGGGGAATGCCTTCATCTCATTCTTCCACTGTTTCTGCTCTTGCTGTAGCCATTGGCCTCCAAGAAGGCTTTGGAGCATCAGTCTTTGCTGTTGCATTGATCTTAGCATGTATTGTATGGTCTCCTTATTCATTTTATGCCTACCATTCTGATTCAAGTTGTTGTAAATTTCCTGGAACGATTCTAAGAAAAAAAAAAAATGGTGGCAGGTAATGTACGATGCAACTGGTGTGAGATTACATGCTGGACGCCAAGCAGAGGTTATATGCTTCTTTGTTCTATACCTGTAACAGCTTGCCCAAGCCCACCCACCCTTAAAAGATATGGTCTCTTTTGGCTTTTATTTTCGGGCTTCTACTCAATATTTTTAAAACACCCTTATAAATAATGTTTCGTTCTCTCTCCAACCTACGTGGATCTCACAATCCACTCCCCCTTTGAGGCTTAGTGTCCTTGCTTACACTCGTTTCCCTCTCCAATCAATGTGGTATCTCACAAAACACTCCTTTTGAGGACCAGCGTCCTTGCTGGCACTCGTTCCCCTCTCCAATCGATGTGGGGTTCTCACAATACACCCATCTTCGAGGCCCAATATTCTTGCTGGCACTTTTTCCCCTCTCCAATCGACGTTGGATCTCATAATACTCCCAAGAAAAAGACTCTTCCTCCTTTTCTTTTTCCTTTTCTACTCAATTGCTTTTATTTGGACATTACTGTTATATCTTAAAGCTTATCTTTTTTATTGACTGTTTAATATACTCTTAACTAGTTTTCTTTTTTTAGGTTTTGAATCAAATAGTTTATGAACTTCCTGCTGAACATCCTTTGGCTGAGAGCAGACCATTGCGAGAACTTCTTGGCCACACCCCTCCCCAGGTTTCCATTAGGATGACACTGTTAATGAAATATCATTTTTATTTCACTGCAAATTCAGACTTCCATGACCTTCATATGCATGTTGAAGACTATGAAATTAACTTTGTGATAAAATGGGAGATTGTTAGTTTTTACCATCACTTTTGGTATATTGTGGAACTGGAAATGATGTGGACACATGGAGTGCCCTTTGAATAACTGAGTTTTTGAATGCTTTCTCAATGTGTTGGAACCTTCTGGTTTTTGGCTGGGACGGTTTCAAAGAGCAGCTAAAACAAGTAAAGGATATTCATTTGTAGCTTTTTGACGTTATCTACAAAAGAAGTCAGGATTCCAATGAATTGCCTTAAAGTATAGTACGAGAATAGCTTATTCAGGATTCACTTTCATTGAAGAAAGATTTGAGGCCATTCTTTCTAACGTGCGGCTAAATTCTATTTGATTCCAACAGGTTGTAGCTGGAGGATTGCTTGGTATTGTCACCTCTTCTATTGGCCATTTGATGATCATAATGACTAGGCCTTGATCATTGTGCTGAAGAAGATCGAGCGGATAAACCAGGTGTTGCTCTGATCTCATCATTAATGAAGGCTGTTTGATGGAAACTTGAGTATGAAATTATTCTTGTGAATATGGTCTGCACATAACCTTTGATCAATGAGATATTTCAGAATCATTGTTTGATTGATTGATTGATTGCTGTATTTAGTGCAATAGGAAGGACCAATACGCTGCAGCCACATCTGCAGTATATCAGAAAACAAACATTTAGCTCTTAGCACTCAAGTGTTAGATAGTGTGAATGTTTGATTAATCCACCACACCACCTAAATGGTGTGAAAGTTATCTTATTTATAATCAAATGAATTACAAG ATGGAATATTCCAAGTCTTTCAAGTGGAAGGGAATTGGCCTCTACAAGTCGGGTCTTCCTTTTCTTCTTATACCACTTCTTCAAATTAAAGCAACCTCTCCATTGGCTTGGCTGTGTGGCGGGGCTGGCGGCGGGGCAGTCTTATTTGCTGCAACCATAACCAAATCCTGTTCGTCGATCAACGGGCCTCCTTCTAGGGCGCCGTCCTCCTTTTCATCTACGGCTTTTACGAATTTCCCTCTCATTTCTGCTCTCATTTCTTTCGCGGTTGCCCAGTTCATCAAGTTCTTCACCTCCTGGTATAAGGAACGACGATGGGATTTTAAGAGACTAGTTGGATCGGGGGGAATGCCTTCATCTCATTCTTCCACTGTTTCTGCTCTTGCTGTAGCCATTGGCCTCCAAGAAGGCTTTGGAGCATCAGTCTTTGCTGTTGCATTGATCTTAGCATGTATTGTAATGTACGATGCAACTGGTGTGAGATTACATGCTGGACGCCAAGCAGAGGTTTTGAATCAAATAGTTTATGAACTTCCTGCTGAACATCCTTTGGCTGAGAGCAGACCATTGCGAGAACTTCTTGGCCACACCCCTCCCCAGGTTGTAGCTGGAGGATTGCTTGGTATTGTCACCTCTTCTATTGGCCATTTGATGATCATAATGACTAGGCCTTGATCATTGTGCTGAAGAAGATCGAGCGGATAAACCAGGTGTTGCTCTGATCTCATCATTAATGAAGGCTGTTTGATGGAAACTTGAGTATGAAATTATTCTTGTGAATATGGTCTGCACATAACCTTTGATCAATGAGATATTTCAGAATCATTGTTTGATTGATTGATTGATTGCTGTATTTAGTGCAATAGGAAGGACCAATACGCTGCAGCCACATCTGCAGTATATCAGAAAACAAACATTTAGCTCTTAGCACTCAAGTGTTAGATAGTGTGAATGTTTGATTAATCCACCACACCACCTAAATGGTGTGAAAGTTATCTTATTTATAATCAAATGAATTACAAG ATGGAATATTCCAAGTCTTTCAAGTGGAAGGGAATTGGCCTCTACAAGTCGGGTCTTCCTTTTCTTCTTATACCACTTCTTCAAATTAAAGCAACCTCTCCATTGGCTTGGCTGTGTGGCGGGGCTGGCGGCGGGGCAGTCTTATTTGCTGCAACCATAACCAAATCCTGTTCGTCGATCAACGGGCCTCCTTCTAGGGCGCCGTCCTCCTTTTCATCTACGGCTTTTACGAATTTCCCTCTCATTTCTGCTCTCATTTCTTTCGCGGTTGCCCAGTTCATCAAGTTCTTCACCTCCTGGTATAAGGAACGACGATGGGATTTTAAGAGACTAGTTGGATCGGGGGGAATGCCTTCATCTCATTCTTCCACTGTTTCTGCTCTTGCTGTAGCCATTGGCCTCCAAGAAGGCTTTGGAGCATCAGTCTTTGCTGTTGCATTGATCTTAGCATGTATTGTAATGTACGATGCAACTGGTGTGAGATTACATGCTGGACGCCAAGCAGAGGTTTTGAATCAAATAGTTTATGAACTTCCTGCTGAACATCCTTTGGCTGAGAGCAGACCATTGCGAGAACTTCTTGGCCACACCCCTCCCCAGGTTGTAGCTGGAGGATTGCTTGGTATTGTCACCTCTTCTATTGGCCATTTGATGATCATAATGACTAGGCCTTGA MEYSKSFKWKGIGLYKSGLPFLLIPLLQIKATSPLAWLCGGAGGGAVLFAATITKSCSSINGPPSRAPSSFSSTAFTNFPLISALISFAVAQFIKFFTSWYKERRWDFKRLVGSGGMPSSHSSTVSALAVAIGLQEGFGASVFAVALILACIVMYDATGVRLHAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQVVAGGLLGIVTSSIGHLMIIMTRP Homology
BLAST of CmaCh04G018180 vs. ExPASy Swiss-Prot
Match: O32107 (Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) OX=224308 GN=yuiD PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.9e-23 Identity = 62/148 (41.89%), Postives = 90/148 (60.81%), Query Frame = 0
BLAST of CmaCh04G018180 vs. ExPASy TrEMBL
Match: A0A6J1KF17 (uncharacterized protein LOC111493291 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493291 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 4.4e-84 Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0
BLAST of CmaCh04G018180 vs. ExPASy TrEMBL
Match: A0A6J1GYA4 (uncharacterized protein LOC111458301 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458301 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 2.6e-81 Identity = 163/169 (96.45%), Postives = 165/169 (97.63%), Query Frame = 0
BLAST of CmaCh04G018180 vs. ExPASy TrEMBL
Match: A0A0A0KS18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590110 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 2.3e-77 Identity = 154/168 (91.67%), Postives = 161/168 (95.83%), Query Frame = 0
BLAST of CmaCh04G018180 vs. ExPASy TrEMBL
Match: A0A1S3BEW6 (uncharacterized membrane protein YuiD isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488911 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 3.0e-77 Identity = 153/168 (91.07%), Postives = 161/168 (95.83%), Query Frame = 0
BLAST of CmaCh04G018180 vs. ExPASy TrEMBL
Match: A0A5A7SSY2 (Putative membrane protein YuiD isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002070 PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 1.5e-76 Identity = 152/167 (91.02%), Postives = 160/167 (95.81%), Query Frame = 0
BLAST of CmaCh04G018180 vs. NCBI nr
Match: XP_022998709.1 (uncharacterized protein LOC111493291 isoform X1 [Cucurbita maxima]) HSP 1 Score: 320.9 bits (821), Expect = 9.0e-84 Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0
BLAST of CmaCh04G018180 vs. NCBI nr
Match: XP_023554720.1 (uncharacterized protein LOC111811897 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 318.2 bits (814), Expect = 5.8e-83 Identity = 166/169 (98.22%), Postives = 167/169 (98.82%), Query Frame = 0
BLAST of CmaCh04G018180 vs. NCBI nr
Match: KAG6601582.1 (hypothetical protein SDJN03_06815, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 314.3 bits (804), Expect = 8.4e-82 Identity = 164/169 (97.04%), Postives = 166/169 (98.22%), Query Frame = 0
BLAST of CmaCh04G018180 vs. NCBI nr
Match: XP_022956625.1 (uncharacterized protein LOC111458301 isoform X2 [Cucurbita moschata]) HSP 1 Score: 311.6 bits (797), Expect = 5.5e-81 Identity = 163/169 (96.45%), Postives = 165/169 (97.63%), Query Frame = 0
BLAST of CmaCh04G018180 vs. NCBI nr
Match: XP_004135303.1 (uncharacterized protein LOC101208855 isoform X2 [Cucumis sativus] >KGN51694.1 hypothetical protein Csa_008259 [Cucumis sativus]) HSP 1 Score: 298.5 bits (763), Expect = 4.8e-77 Identity = 154/168 (91.67%), Postives = 161/168 (95.83%), Query Frame = 0
BLAST of CmaCh04G018180 vs. TAIR 10
Match: AT1G67600.1 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein ) HSP 1 Score: 245.7 bits (626), Expect = 3.4e-65 Identity = 120/155 (77.42%), Postives = 142/155 (91.61%), Query Frame = 0
BLAST of CmaCh04G018180 vs. TAIR 10
Match: AT1G24350.1 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein ) HSP 1 Score: 238.4 bits (607), Expect = 5.5e-63 Identity = 118/142 (83.10%), Postives = 131/142 (92.25%), Query Frame = 0
BLAST of CmaCh04G018180 vs. TAIR 10
Match: AT1G24350.3 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein ) HSP 1 Score: 227.3 bits (578), Expect = 1.3e-59 Identity = 118/160 (73.75%), Postives = 131/160 (81.88%), Query Frame = 0
BLAST of CmaCh04G018180 vs. TAIR 10
Match: AT1G24350.2 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein ) HSP 1 Score: 220.3 bits (560), Expect = 1.5e-57 Identity = 108/126 (85.71%), Postives = 119/126 (94.44%), Query Frame = 0
BLAST of CmaCh04G018180 vs. TAIR 10
Match: AT3G21610.1 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein ) HSP 1 Score: 199.9 bits (507), Expect = 2.2e-51 Identity = 95/135 (70.37%), Postives = 116/135 (85.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|