CmaCh04G016940 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G016940
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Alpha-1,4 glucan phosphorylase
Location	Cma_Chr04: 8518465 .. 8521189 (+)
RNA-Seq Expression	CmaCh04G016940
Synteny	CmaCh04G016940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAATTGTAGAAATCTTTGAATTACCAGACTCGGTAATGGAGCTGCTAGTAAAATCAGCGGCGGAGTCTGTGGCTGACCTCGACGAGGAATCGTTACCTGCTGAAGAAGGAGACGAGTCTGCACACTGCTCGTTCCTGGCGGTGATCCATCCCAGCATATCAGGTAGTTAATTTTACAAGTTTGGATTACCTTGCTGGCTCTTAAGATCAATCTCATAAGACCGAACATTAAACTAATGAAAATGAATGAATAAATTGTTCCAAATATCGAGATCTAAAGCTTTTAGGAGCCATTACAATTGGTTTGGAAAGGTTAACCTTCGATGTTAATTTTCTAGGTTGGGTATTGATTTCTGCAATGTTTTTCATGTTACATAATTTGATTGGAAAAGCACGGCTGGAATAGAGGCCAGTGGAACCGGTAACATGAAGTTTGCTACGAATGGATGCTTACTGATTGGAAGATTGGATGGGCGCATGAAATTGCTGGCCTAAGAAAAGGAAGAACTAAAGGCAAGGTAAGCTTGGAAACTCTTGCTAGAATCCCAGAAGAATCAGTAGTAGTTTTCAAACTTAAAAGCTTTTCATAGTTATGAAAAGCAACATTTCTTACACCGTAAAGGAGCCCCACGGTTTGAGGAAGTGAAGGCATTCGAAACCAAGCATTCAGTTGGGGATTAGAATGAAGCATTCTTTATAGGGGTGTAAAAACCTCTCTCTAAGCAAACACGTTCTAAAAATTTGATGTAAAGTTCGGAAGGAAAAGCTCAAAGAACACAATATCTGCTAACAGTGGGCTTGAGCTGTTACAAATGGTATAAAAGCTAGACACCAGGTGATGTGCTAGTGAGGAGGCTGAGCCCTGAAGGGGTGGATATGAGACGGTGTGCTAGCAAGGATGGTGGGTCTCAAAGGGGGTGGACATGAGGCGGTGTGCTAGCGAGGATGCTGGGTCTCGAAGAGGGGTGGATTGGAGGGTCCCACATTGAATGGAGAAGGAGACGAGTGCTAATGAGGACGCTAGACTCCAAAAGGGGGTGAATTATGAGATCTCACCTCGATTGGGAAGGAGAACAAAGCTAAGAGTGTGGAAACCTCTCTCTAGCAGACGTGTTTTAAACCCTTGAGGGAAAGTCCGGAAGGAAAAGCCCAAAAAAGACAATATCAGCTAGTGGTGACTTGGACTGTTACGAACTTGTGGGATTTTCAGAAGGAAATGAAGGTTATGGTGAGGCTGACTGCTTCCTCGTTTACCAGGACTTCCGTAGTTACATAGAGTGCCAAGACAGGGTTGGATGAGGCCTATCATGATCAAAAGGTAATCACCAAAGTCTGTACTCTCTAATGAGCCAAGCTGCTAAACTCCTAATCGTTTGCTTGTTCTGTACAGAGATGGACCAAGATGTCGATCTTAAGCACAGCTGGTTCATACAAGTTCAGCAGTGACAGAACCATTCATGAGTATACAAGAGATATATGAAAGATTTCTCCACTATTGCTGCTATCTTAAAAGGTTTGATTTCTTTTCCCTTCCCTATAAAATTTGCTCTCCATTTCATTGCTATTGTAATTGCCAAATGAGATAAGAAAACAGAAACAGGAGATGAACTTGGAACATCTTAGCCTATTCAAAATTAAACTGACCCTATTGCATAACAAGTTCGTTACAATGCTCAGAGTTTTGTTAGATCATTTCTAGATAGAGATGTCTATTTAATCTGAACGGGGCAAGGACTTTCCATTTAAACCGGGAATGGAAAAGAGAATGGAGAGAGATTTCAACTGAATTCAACTGAGAATCACTACAAACCGACCCTAAATTCATGACAGAAACGAAAAGAGAAAAATAGGAACCCTCCTCCATCTCCAAGCTTAAAGCCCAAACATTTGGACATGACAATAAATTTGAAATAGAGGATTCAGCTCACTTTTTTGGTCCAAAAAAATAAAAAAATCAGTAAAAAAGTTAAGGAACCTAAAACAATGATAAAGACAAAAAAGCAAATGCCAAAAACATGCCCTACAGACTTCATTTGCAAGTTTGATAACCTCACATTATCAGGACAAGATAGAACCAATTATCACAGACTTGCCCGTATTATTGGATTGGTGGCTACATGCTCCTGGATCCTTCATCAGACTCATCACCATCTCCCACTTTCCTCTTCTTCCATAGGAGCAGGAACATTAAGATCAATTAGACCACTCATCCCATTGGACTCTGGCCTTGTCACTACAGATGCCTCTTCTAAACTCCCGACCACATGGGACCTCTTATGCCCCCCCAAAGCCTGCCCTGATTTGAAAGCCTTGAAGCAAATTGGGCACTTGTGTTTCTTTTTGGCTCCTAATTTCTTCTCTTCATTTCCAGAACTGTCCTGGTGAGTCTTGTTTTTTCCATTGCTTAACTCAGTTAACTCCCTAGCTGGTATGGACATGGAATTTGTAGCGCTGTTTTCACCCGACTGATGCGTCCACTCGCAGCCATTGCTCATTTTTGTATACATCTCTCTGAAATTAGGACTATATGATTCATTGTTCAACCTCTTTCTTAGCTCATACTTGTAAGAAGATGCATGCACTTGTTCATCATTCTCTTTGGTTTTTCCTATCCTGACTCCATATTTTCCATCTGGGTTCTTATATTCTTCATCCATAACACCCCGATTAAGACACACTTTCAGTTTAACTTTCTTGTAGACTTCTTTTCTGAAATTTTCAG

mRNA sequence

ATGATAATTGTAGAAATCTTTGAATTACCAGACTCGGTAATGGAGCTGCTAGTAAAATCAGCGGCGGAGTCTGTGGCTGACCTCGACGAGGAATCGTTACCTGCTGAAGAAGGAGACGAGTCTGCACACTGCTCGTTCCTGGCGGTGATCCATCCCAGCATATCAGGGTTGGATGAGGCCTATCATGATCAAAAGAGATGGACCAAGATGTCGATCTTAAGCACAGCTGGTTCATACAAGTTCAGCAGTGACAGAACCATTCATGAGTATACAAGAGATATATGAAAGATTTCTCCACTATTGCTGCTATCTTAAAAGACTTCTTTTCTGAAATTTTCAG

Coding sequence (CDS)

ATGATAATTGTAGAAATCTTTGAATTACCAGACTCGGTAATGGAGCTGCTAGTAAAATCAGCGGCGGAGTCTGTGGCTGACCTCGACGAGGAATCGTTACCTGCTGAAGAAGGAGACGAGTCTGCACACTGCTCGTTCCTGGCGGTGATCCATCCCAGCATATCAGGGTTGGATGAGGCCTATCATGATCAAAAGAGATGGACCAAGATGTCGATCTTAAGCACAGCTGGTTCATACAAGTTCAGCAGTGACAGAACCATTCATGAGTATACAAGAGATATATGA

Protein sequence

MIIVEIFELPDSVMELLVKSAAESVADLDEESLPAEEGDESAHCSFLAVIHPSISGLDEAYHDQKRWTKMSILSTAGSYKFSSDRTIHEYTRDI

Homology

[Close]

BLAST of CmaCh04G016940 vs. ExPASy Swiss-Prot
Match: P04045 (Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4113 PE=1 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 4.0e-12
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0


Query: 57  LDEAYHDQKRWTKMSILSTAGSYKFSSDRTIHEYTRDI 95
           +DEAY DQKRWT MSIL+TAGSYKFSSDRTIHEY +DI
Sbjct: 920 VDEAYRDQKRWTTMSILNTAGSYKFSSDRTIHEYAKDI 957

[Close]

BLAST of CmaCh04G016940 vs. ExPASy Swiss-Prot
Match: P53535 (Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4113 GN=STP-1 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.2e-12
Identity = 31/38 (81.58%), Postives = 36/38 (94.74%), Query Frame = 0


Query: 57  LDEAYHDQKRWTKMSILSTAGSYKFSSDRTIHEYTRDI 95
           +DEAY DQK+WTKMSIL+TAGS+KFSSDRTIH+Y RDI
Sbjct: 928 VDEAYRDQKKWTKMSILNTAGSFKFSSDRTIHQYARDI 965

[Close]

BLAST of CmaCh04G016940 vs. ExPASy Swiss-Prot
Match: Q9LIB2 (Alpha-glucan phosphorylase 1 OS=Arabidopsis thaliana OX=3702 GN=PHS1 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 8.9e-12
Identity = 30/38 (78.95%), Postives = 36/38 (94.74%), Query Frame = 0


Query: 57  LDEAYHDQKRWTKMSILSTAGSYKFSSDRTIHEYTRDI 95
           +DEAY DQKRWT+MSI++TAGS+KFSSDRTIHEY +DI
Sbjct: 916 VDEAYRDQKRWTRMSIMNTAGSFKFSSDRTIHEYAKDI 953

[Close]

BLAST of CmaCh04G016940 vs. ExPASy Swiss-Prot
Match: P27598 (Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Ipomoea batatas OX=4120 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.5e-11
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 0


Query: 57  LDEAYHDQKRWTKMSILSTAGSYKFSSDRTIHEYTRDI 95
           +DEAY DQK WT+MSIL+TAGSYKFSSDRTIHEY +DI
Sbjct: 909 VDEAYRDQKIWTRMSILNTAGSYKFSSDRTIHEYAKDI 946

[Close]

BLAST of CmaCh04G016940 vs. ExPASy Swiss-Prot
Match: P53536 (Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Vicia faba OX=3906 GN=PHO1 PE=2 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 1.7e-10
Identity = 29/38 (76.32%), Postives = 35/38 (92.11%), Query Frame = 0


Query: 57  LDEAYHDQKRWTKMSILSTAGSYKFSSDRTIHEYTRDI 95
           +D+AY DQK+WT+MSIL+TAGS KFSSDRTIHEY R+I
Sbjct: 957 VDKAYRDQKKWTRMSILNTAGSSKFSSDRTIHEYAREI 994

[Close]

BLAST of CmaCh04G016940 vs. ExPASy TrEMBL
Match: A0A371E7L9 (Alpha-1,4 glucan phosphorylase (Fragment) OS=Mucuna pruriens OX=157652 GN=STP-1 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.6e-11
Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = 0


Query: 57  LDEAYHDQKRWTKMSILSTAGSYKFSSDRTIHEYTRDI 95
           +D+AYHDQKRWTKMSIL+TAGSYKFSSDRTIHEY RDI
Sbjct: 339 VDKAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYARDI 376

[Close]

BLAST of CmaCh04G016940 vs. ExPASy TrEMBL
Match: M5XMG5 (Alpha-1,4 glucan phosphorylase OS=Prunus persica OX=3760 GN=PRUPE_1G283400 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-10
Identity = 41/67 (61.19%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 32  SLPAEEGDESAHCSFLAVIHPSI----SGLDEAYHDQKRWTKMSILSTAGSYKFSSDRTI 91
           SL   EG   A    +   +PS       +DEAY DQKRWTKMSIL+TAGSYKFSSDRTI
Sbjct: 875 SLEGNEGYGRADYFLVGKDYPSYLECQDKVDEAYRDQKRWTKMSILNTAGSYKFSSDRTI 934

Query: 92  HEYTRDI 95
           HEY RDI
Sbjct: 935 HEYARDI 941

[Close]

BLAST of CmaCh04G016940 vs. ExPASy TrEMBL
Match: A0A251R4G0 (Alpha-1,4 glucan phosphorylase OS=Prunus persica OX=3760 GN=PRUPE_1G283400 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-10
Identity = 41/67 (61.19%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 32  SLPAEEGDESAHCSFLAVIHPSI----SGLDEAYHDQKRWTKMSILSTAGSYKFSSDRTI 91
           SL   EG   A    +   +PS       +DEAY DQKRWTKMSIL+TAGSYKFSSDRTI
Sbjct: 761 SLEGNEGYGRADYFLVGKDYPSYLECQDKVDEAYRDQKRWTKMSILNTAGSYKFSSDRTI 820

Query: 92  HEYTRDI 95
           HEY RDI
Sbjct: 821 HEYARDI 827

[Close]

BLAST of CmaCh04G016940 vs. ExPASy TrEMBL
Match: A0A059D718 (Alpha-1,4 glucan phosphorylase OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03166 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.3e-10
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 0


Query: 57  LDEAYHDQKRWTKMSILSTAGSYKFSSDRTIHEYTRDI 95
           +DEAY DQKRWTKMSIL+TAGSYKFSSDRTIHEY RDI
Sbjct: 910 VDEAYRDQKRWTKMSILNTAGSYKFSSDRTIHEYARDI 947

[Close]

BLAST of CmaCh04G016940 vs. ExPASy TrEMBL
Match: A0A445F004 (Alpha-1,4 glucan phosphorylase OS=Glycine soja OX=3848 GN=D0Y65_052925 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.3e-10
Identity = 33/38 (86.84%), Postives = 37/38 (97.37%), Query Frame = 0


Query: 57  LDEAYHDQKRWTKMSILSTAGSYKFSSDRTIHEYTRDI 95
           +D+AYHDQKRWTKMSIL+TAGS+KFSSDRTIHEY RDI
Sbjct: 932 VDKAYHDQKRWTKMSILNTAGSFKFSSDRTIHEYARDI 969

[Close]

BLAST of CmaCh04G016940 vs. NCBI nr
Match: KAG1347833.1 (putative Alpha-1,4 glucan phosphorylase [Cocos nucifera])

HSP 1 Score: 78.6 bits (192), Expect = 3.3e-11
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0


Query: 57  LDEAYHDQKRWTKMSILSTAGSYKFSSDRTIHEYTRDI 95
           +DEAYHDQKRWTKMSIL+TAGSYKFSSDRTIHEY RDI
Sbjct: 567 VDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYARDI 604

[Close]

BLAST of CmaCh04G016940 vs. NCBI nr
Match: RDX62036.1 (Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic, partial [Mucuna pruriens])

HSP 1 Score: 77.0 bits (188), Expect = 9.5e-11
Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = 0


Query: 57  LDEAYHDQKRWTKMSILSTAGSYKFSSDRTIHEYTRDI 95
           +D+AYHDQKRWTKMSIL+TAGSYKFSSDRTIHEY RDI
Sbjct: 339 VDKAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYARDI 376

[Close]

BLAST of CmaCh04G016940 vs. NCBI nr
Match: KAF7851559.1 (hypothetical protein BT93_L3649 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 76.3 bits (186), Expect = 1.6e-10
Identity = 41/67 (61.19%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 32  SLPAEEGDESAHCSFLAVIHPSISG----LDEAYHDQKRWTKMSILSTAGSYKFSSDRTI 91
           SL   EG   A    ++   PS  G    +DEAY DQKRWT+MSIL+TAGSYKFSSDRTI
Sbjct: 204 SLEGNEGFGRADYFLVSKDFPSYIGCQEEVDEAYRDQKRWTRMSILNTAGSYKFSSDRTI 263

Query: 92  HEYTRDI 95
           HEY RDI
Sbjct: 264 HEYARDI 270

[Close]

BLAST of CmaCh04G016940 vs. NCBI nr
Match: XP_007225492.1 (alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic [Prunus persica] >ONI30948.1 hypothetical protein PRUPE_1G283400 [Prunus persica])

HSP 1 Score: 75.9 bits (185), Expect = 2.1e-10
Identity = 41/67 (61.19%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 32  SLPAEEGDESAHCSFLAVIHPSI----SGLDEAYHDQKRWTKMSILSTAGSYKFSSDRTI 91
           SL   EG   A    +   +PS       +DEAY DQKRWTKMSIL+TAGSYKFSSDRTI
Sbjct: 875 SLEGNEGYGRADYFLVGKDYPSYLECQDKVDEAYRDQKRWTKMSILNTAGSYKFSSDRTI 934

Query: 92  HEYTRDI 95
           HEY RDI
Sbjct: 935 HEYARDI 941

[Close]

BLAST of CmaCh04G016940 vs. NCBI nr
Match: ONI30949.1 (hypothetical protein PRUPE_1G283400 [Prunus persica])

HSP 1 Score: 75.9 bits (185), Expect = 2.1e-10
Identity = 41/67 (61.19%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 32  SLPAEEGDESAHCSFLAVIHPSI----SGLDEAYHDQKRWTKMSILSTAGSYKFSSDRTI 91
           SL   EG   A    +   +PS       +DEAY DQKRWTKMSIL+TAGSYKFSSDRTI
Sbjct: 761 SLEGNEGYGRADYFLVGKDYPSYLECQDKVDEAYRDQKRWTKMSILNTAGSYKFSSDRTI 820

Query: 92  HEYTRDI 95
           HEY RDI
Sbjct: 821 HEYARDI 827

[Close]

BLAST of CmaCh04G016940 vs. TAIR 10
Match: AT3G29320.1 (Glycosyl transferase, family 35 )

HSP 1 Score: 70.9 bits (172), Expect = 6.3e-13
Identity = 30/38 (78.95%), Postives = 36/38 (94.74%), Query Frame = 0


Query: 57  LDEAYHDQKRWTKMSILSTAGSYKFSSDRTIHEYTRDI 95
           +DEAY DQKRWT+MSI++TAGS+KFSSDRTIHEY +DI
Sbjct: 916 VDEAYRDQKRWTRMSIMNTAGSFKFSSDRTIHEYAKDI 953

[Close]

BLAST of CmaCh04G016940 vs. TAIR 10
Match: AT3G46970.1 (alpha-glucan phosphorylase 2 )

HSP 1 Score: 58.2 bits (139), Expect = 4.3e-09
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 0


Query: 57  LDEAYHDQKRWTKMSILSTAGSYKFSSDRTIHEYTRDI 95
           +DEAY D+K W KMSILSTAGS KFSSDRTI +Y ++I
Sbjct: 795 VDEAYKDRKGWLKMSILSTAGSGKFSSDRTIAQYAKEI 832

The following BLAST results are available for this feature:

BLAST of CmaCh04G016940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04045	4.0e-12	84.21	Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic OS=Solanu...	[more]
P53535	5.2e-12	81.58	Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanu...	[more]
Q9LIB2	8.9e-12	78.95	Alpha-glucan phosphorylase 1 OS=Arabidopsis thaliana OX=3702 GN=PHS1 PE=1 SV=1	[more]
P27598	1.5e-11	81.58	Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Ipomoea ...	[more]
P53536	1.7e-10	76.32	Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Vicia fa...	[more]

BLAST of CmaCh04G016940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A371E7L9	4.6e-11	89.47	Alpha-1,4 glucan phosphorylase (Fragment) OS=Mucuna pruriens OX=157652 GN=STP-1 ...	[more]
M5XMG5	1.0e-10	61.19	Alpha-1,4 glucan phosphorylase OS=Prunus persica OX=3760 GN=PRUPE_1G283400 PE=3 ...	[more]
A0A251R4G0	1.0e-10	61.19	Alpha-1,4 glucan phosphorylase OS=Prunus persica OX=3760 GN=PRUPE_1G283400 PE=3 ...	[more]
A0A059D718	1.3e-10	89.47	Alpha-1,4 glucan phosphorylase OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03166 ...	[more]
A0A445F004	1.3e-10	86.84	Alpha-1,4 glucan phosphorylase OS=Glycine soja OX=3848 GN=D0Y65_052925 PE=3 SV=1	[more]

BLAST of CmaCh04G016940 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG1347833.1	3.3e-11	92.11	putative Alpha-1,4 glucan phosphorylase [Cocos nucifera]	[more]
RDX62036.1	9.5e-11	89.47	Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic, partial ...	[more]
KAF7851559.1	1.6e-10	61.19	hypothetical protein BT93_L3649 [Corymbia citriodora subsp. variegata]	[more]
XP_007225492.1	2.1e-10	61.19	alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic [Prunus p...	[more]
ONI30949.1	2.1e-10	61.19	hypothetical protein PRUPE_1G283400 [Prunus persica]	[more]

BLAST of CmaCh04G016940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29320.1	6.3e-13	78.95	Glycosyl transferase, family 35	[more]
AT3G46970.1	4.3e-09	71.05	alpha-glucan phosphorylase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000811	Glycosyl transferase, family 35	PFAM	PF00343	Phosphorylase	coord: 56..94 e-value: 4.9E-11 score: 41.7
IPR000811	Glycosyl transferase, family 35	PANTHER	PTHR11468	GLYCOGEN PHOSPHORYLASE	coord: 57..94
None	No IPR available	PANTHER	PTHR11468:SF27	ALPHA-1,4 GLUCAN PHOSPHORYLASE L-2 ISOZYME, CHLOROPLASTIC/AMYLOPLASTIC	coord: 57..94
None	No IPR available	SUPERFAMILY	53756	UDP-Glycosyltransferase/glycogen phosphorylase	coord: 56..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G016940.1	CmaCh04G016940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0005980	glycogen catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008184	glycogen phosphorylase activity
molecular_function	GO:0102250	linear malto-oligosaccharide phosphorylase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0102499	SHG alpha-glucan phosphorylase activity