CmaCh04G016070 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G016070
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic
Location	Cma_Chr04: 8112623 .. 8116399 (-)
RNA-Seq Expression	CmaCh04G016070
Synteny	CmaCh04G016070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTCCCCCCAGGTTGGAGTCCAAATCCCGGCAAATTATCCTTACGGACTTTATTTTTGAAGTATCAATTTACTCGGTTCCGATGGAAGCGGGAATTTTCTTCCCCGTCACTCCAATTCTATGGAGTTCTAGTTTGAAGTGCACTCTCTGTCCCGTTCGTCGCTCTTTCCCGCGTATCATAAGGGCTTCTTCCTTGAATTCGCAAGCAAGTTACAGAGGGCCGAAGCCTTCAAGGGATTGGGTAGCCGAATGGGTATCCAAGAACAACGATGCCGTTCGGAGTTTGCCCATTTACGTCGGTGGAATTTCTCTATTGGTCGTCCTCTTTAACCGCGCCGTTTCAGGCATTGCTCCCGTCGCCGATGCCAGCAGGTTCGTTAAGTTCAATTAATCTATCGAATGCTGATTATTTTCACCAGTCAATTTGTATTGCTTACTCGGATGGAAATTCCATCTTCGATAACTTCGTCAACAATGGCGTTTTCCTATTTTAGCGGCATGATTCTGCAACTATACTTCACGTAATTAGTTGCTCTATTTATAGTAATAAACTATTATCAATTTCGGCAGTTCACAGTCAAGAGCTGATCTATTAACCCTTGGACTAGCCGTCACAAATGTCTTGACTGGGCTGGTGTGGCTGTCGATCAGGCCGAAATCTATAACACCGGTATGGGTTAACGATAAGATTTCCATGCTCAACCTTTCCTCTCTATCAGGAGATTCCTGTTCTATTCTTATTCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCACTTTCATTTTCCATATCAGGTAAATCCACAAGGAGTAGAATGTGAGAGGATATGCTCCAGTCTCCCTGATCTTGTAACATCCGAGTTGCTATGGTAAATACTTTATATAATTTTCTTCTTTGATAATTTGAAACTGTGAATATTATTAAGTATTGAAGGCGGTTAAGATCATTGAAAATCACTTTCGATAGGGATGCTTTGTTTGTTTTGGTTAATGGATATTGATGAGTGAAACTTGATATCGTGCTTGAGAATTATGACTTTTTATCTATTAGTTTTCCTATTATCCTATTGAATTTTATAATCCATGTCATTTTGGTTACCCTCATTGTCACATGTTCATGGGAATGTCTAGTGACAGGGAAAGCTAACTTCGTATGCCAATATGTATCTGATAAACTACTTTAGGTATTTGAGGCTAAGGATTCTTAGAGGAAATAGGAAAAATCCTCGACTAGTGGGTTAATTGCTACTTTTTGCTGCCTATTCTTAGGGTATGGAAGTCTCTGTCAGAAGTGACATGCTGCAGGTCTCTGGTTGTTGTCTACGATGGTATGTGTATATTTCAAGTTGGTTTTGCTGCTGAATCAGCTGAGGGTGATGGGGAGGCCGAACATGTTGAAGCTAGTAAACTGATGCAGGGATTGCTCTACAAGGGAATTCTCAAATCCCAAGCTCGTGAGTAATAAACGACTTGTGCACAGAGACCATCACACAATGTACTACTTGATTGGCGTGCAATTGTAAATATCTGTCACTATTCGTTTTTGAGAAACCATCTTTCCTATATTTGCAGAGAGCTACTTGGCCAATCTTTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGTACTTCGATATTAAGGGTTGTTGTTAGATTTGTTCGTTTTTCTCTTATCTCGGGAATAAATAACTGGTCGATAGTTTTCTACAGTGTTTCATTCTTTGGTATTTGTCACCATATAACTAGTAGACACATAAACTAATAAATTCTATGCATGTCTGATTATGGTTTAGAGTGCAAATGAAGCTGAAGAATAATTGGACTTTTAGTTATATATGTAATTAGCTATTACGTTCCCACATATTCTCTTTCAGAAACTTGGGAGTTCTTTTCCCTGCCTACTGGCTAAATAGAGACTCTTCTTCTTCACTGAAACCAGACACTGCTACTTGGCAAAGTAGGAAAGAATGTGATGAAACTTTCAATTTGATTTGAAACTTTTATGGTTCTACAATTAAATAGGATTTTATTCTTCACCTGTTTACTAATGGGCTTCCTTATTTGGAAGGCGGTGGTCAATTCAACGCCTGAAAACTTGGTAATTTGTTATAGAATCTAAGAGATTGTTGTTGGTCTGTCGTAGTGTTTCTAAAAAATAATTTTGTTATTGTGTACTTGAGTTCCCTTGCTCACCAGCCTGTATTGGTGAAGGAGTAGTAGTTAATTTTTCTTATATAAAAAAAGTGAAATAGATTAACTAAAGATAATAAATCATGAAAACAAATGATGGAAAAATAGCTTTATGAAAACAGTTAAATTTTGTTTTACTACCTTTCTCTCCTATCGTTAGGTAGTCTTTGCTATTGTAAGAAATTCAATGAGGTGATTTCCGCCTTCAATCTCATCAGCATCACTGCATGTTTGGGGGATATTTAAAAGAATCCATTTTGACTCAGTTTGTACTGCTACATATACATACAAATGAATGCAGAACAACGTGAAATTGTAACTGTGTTTGTGCACACTATATCTTACTCGTGTTAGATAGGCCGGTTTTCGAAGTAAATTGAAACCACTGCTTTCTAAGACAAACCTGCTATTCTAGGCTGTAATCTTGCAACCACTTGGGGAAAAGGGTATTGCTATAATTGGTGGCAACACTATCAGGGGTTTCACAACCTCTGATCAGGTACTCGTTCTTAAGCCTCTTTTCTCTTTCTTAATGAGACTCGTTAATATTCGTGGATTTTTTCTCTATGGGATCCTTGTCAAAAATTGGTCTTGGATATTGTTCTACCTGTTAATCAGTGTGAATAAATAGAACTACATATCTGTTTGACATAATCTCCAATTCCAGCTTCTCTACCTAGAACACTTCCCCTCGACCATTGTACATAATTTCTGCATATTGATTGTGATGGTCTTTCTTTATGTGGTATAATTACAATATCCAGCTTGAGAATTAAAATGTTCACAGGCATGGATTTCACTAGTTGGAGAGAAGCTGGATGCTACGCTGTTGAAATATTCAAATAATTTGCAACCAGCGGCAAAATTGAGCTCAAGAGGGGACTGA

mRNA sequence

CGTTCCCCCCAGGTTGGAGTCCAAATCCCGGCAAATTATCCTTACGGACTTTATTTTTGAAGTATCAATTTACTCGGTTCCGATGGAAGCGGGAATTTTCTTCCCCGTCACTCCAATTCTATGGAGTTCTAGTTTGAAGTGCACTCTCTGTCCCGTTCGTCGCTCTTTCCCGCGTATCATAAGGGCTTCTTCCTTGAATTCGCAAGCAAGTTACAGAGGGCCGAAGCCTTCAAGGGATTGGGTAGCCGAATGGGTATCCAAGAACAACGATGCCGTTCGGAGTTTGCCCATTTACGTCGGTGGAATTTCTCTATTGGTCGTCCTCTTTAACCGCGCCGTTTCAGGCATTGCTCCCGTCGCCGATGCCAGCAGTTCACAGTCAAGAGCTGATCTATTAACCCTTGGACTAGCCGTCACAAATGTCTTGACTGGGCTGGTGTGGCTGTCGATCAGGCCGAAATCTATAACACCGGTAAATCCACAAGGAGTAGAATGTGAGAGGATATGCTCCAGTCTCCCTGATCTTGTAACATCCGAGTTGCTATGGGTATGGAAGTCTCTGTCAGAAGTGACATGCTGCAGGTCTCTGGTTGTTGTCTACGATGGTATGTGTATATTTCAAGTTGGTTTTGCTGCTGAATCAGCTGAGGGTGATGGGGAGGCCGAACATGTTGAAGCTAGTAAACTGATGCAGGGATTGCTCTACAAGGGAATTCTCAAATCCCAAGCTCAGAGCTACTTGGCCAATCTTTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGCTGTAATCTTGCAACCACTTGGGGAAAAGGGTATTGCTATAATTGGTGGCAACACTATCAGGGGTTTCACAACCTCTGATCAGGCATGGATTTCACTAGTTGGAGAGAAGCTGGATGCTACGCTGTTGAAATATTCAAATAATTTGCAACCAGCGGCAAAATTGAGCTCAAGAGGGGACTGA

Coding sequence (CDS)

ATGGAAGCGGGAATTTTCTTCCCCGTCACTCCAATTCTATGGAGTTCTAGTTTGAAGTGCACTCTCTGTCCCGTTCGTCGCTCTTTCCCGCGTATCATAAGGGCTTCTTCCTTGAATTCGCAAGCAAGTTACAGAGGGCCGAAGCCTTCAAGGGATTGGGTAGCCGAATGGGTATCCAAGAACAACGATGCCGTTCGGAGTTTGCCCATTTACGTCGGTGGAATTTCTCTATTGGTCGTCCTCTTTAACCGCGCCGTTTCAGGCATTGCTCCCGTCGCCGATGCCAGCAGTTCACAGTCAAGAGCTGATCTATTAACCCTTGGACTAGCCGTCACAAATGTCTTGACTGGGCTGGTGTGGCTGTCGATCAGGCCGAAATCTATAACACCGGTAAATCCACAAGGAGTAGAATGTGAGAGGATATGCTCCAGTCTCCCTGATCTTGTAACATCCGAGTTGCTATGGGTATGGAAGTCTCTGTCAGAAGTGACATGCTGCAGGTCTCTGGTTGTTGTCTACGATGGTATGTGTATATTTCAAGTTGGTTTTGCTGCTGAATCAGCTGAGGGTGATGGGGAGGCCGAACATGTTGAAGCTAGTAAACTGATGCAGGGATTGCTCTACAAGGGAATTCTCAAATCCCAAGCTCAGAGCTACTTGGCCAATCTTTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGCTGTAATCTTGCAACCACTTGGGGAAAAGGGTATTGCTATAATTGGTGGCAACACTATCAGGGGTTTCACAACCTCTGATCAGGCATGGATTTCACTAGTTGGAGAGAAGCTGGATGCTACGCTGTTGAAATATTCAAATAATTTGCAACCAGCGGCAAAATTGAGCTCAAGAGGGGACTGA

Protein sequence

MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

Homology

[Close]

BLAST of CmaCh04G016070 vs. ExPASy Swiss-Prot
Match: Q6NQK9 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCB4 PE=1 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 3.2e-103
Identity = 194/288 (67.36%), Postives = 234/288 (81.25%), Query Frame = 0


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSRDWVAEW 60
           MEA I      I WS++ + +  P+   FPR IRASS ++     +Y GPKP ++ VA++
Sbjct: 1   MEARIILLRIQIPWSANRQFSHPPL--DFPRFIRASSSSTSQKPKTYEGPKPRKNLVADF 60

Query: 61  VSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTG 120
           +SKN+D VRSLPIYVGG SLL VLFNR VSGIAPVADASSSQSRADLL LGLAVTN+LTG
Sbjct: 61  ISKNDDLVRSLPIYVGGASLLAVLFNRTVSGIAPVADASSSQSRADLLALGLAVTNLLTG 120

Query: 121 LVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMC 180
           LVWLSIRPKSITPVNP+GVEC+ + S LP  + SELLW W+SL   TCC+SLV+VY+G+C
Sbjct: 121 LVWLSIRPKSITPVNPKGVECKVVESDLPASMVSELLWAWESLKVATCCKSLVIVYNGIC 180

Query: 181 IFQVGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPS 240
           + Q+G  AES E D +   V+  KLMQG +Y+G++KS+AQSYLANLSLYPG+SELPFLP+
Sbjct: 181 LIQIGMVAESPE-DKKTVIVKTDKLMQGSVYRGVMKSKAQSYLANLSLYPGRSELPFLPA 240

Query: 241 NTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY 286
           NTQAVILQPLG+KGIA+IGGNTIRGFT+SDQAWIS +GEKLDATL +Y
Sbjct: 241 NTQAVILQPLGDKGIAVIGGNTIRGFTSSDQAWISSIGEKLDATLGRY 285

[Close]

BLAST of CmaCh04G016070 vs. ExPASy TrEMBL
Match: A0A6J1J9M5 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482990 PE=4 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 4.7e-166
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60
           MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60

Query: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120
           NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW
Sbjct: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120

Query: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180
           LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ
Sbjct: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180

Query: 181 VGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300
           AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300

[Close]

BLAST of CmaCh04G016070 vs. ExPASy TrEMBL
Match: A0A6J1H029 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458387 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.1e-164
Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60
           MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPS DWVAEWVSK
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSK 60

Query: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120
           NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW
Sbjct: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120

Query: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180
           LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ
Sbjct: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180

Query: 181 VGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEGDGEAEHVEASKLMQG LYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGDGEAEHVEASKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300
           AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300

[Close]

BLAST of CmaCh04G016070 vs. ExPASy TrEMBL
Match: A0A6J1DCN6 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019127 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 3.8e-144
Identity = 262/310 (84.52%), Postives = 282/310 (90.97%), Query Frame = 0


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQAS----------YRGPKPS 60
           MEAGIFF V PILWS + KC LCPVRRSFPRIIRASS +S +S          YRGPKP+
Sbjct: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60

Query: 61  RDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120
           RDWVA+WV++N+DAVRSLPI+VGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA
Sbjct: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120

Query: 121 VTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLV 180
           VTNVL GLVWLSIRPKSITPVN QGV C+R+CSSLPDLVT ELLWVW+SLSEVTCCRSLV
Sbjct: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180

Query: 181 VVYDGMCIFQVGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKS 240
           VVYDGMC+FQVGFAAES EGDGEAEHV+AS+LMQG LY+GI KS+AQSYLANLSLYPGKS
Sbjct: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240

Query: 241 ELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQ 300
           ELPFLPSNTQAVILQPLG+KGIA+IGGNTIRGFTTSDQAWISLVGEKLDATL KYSNN Q
Sbjct: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300

[Close]

BLAST of CmaCh04G016070 vs. ExPASy TrEMBL
Match: A0A5A7ST12 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00590 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 1.0e-141
Identity = 264/300 (88.00%), Postives = 273/300 (91.00%), Query Frame = 0


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60
           MEAGIFF VTPI W+S+ K T   +RRSFPRIIRASS  SQ SYRGPKPS D VA+WVS 
Sbjct: 1   MEAGIFFTVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60

Query: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120
           N+D VRS PIYVGGISLL+VLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVL GLVW
Sbjct: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120

Query: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180
           LSIRPKSITPVNP GVE E ICSSLPD VTSELLWVWKSLSEVTCCRSLVVVYDG CI Q
Sbjct: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180

Query: 181 VGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAE AEGDGEAE VEA KLMQGLLYKG+LKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAELAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300
           AVILQPLGEKGIAI+GGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN QPAAKLSS G+
Sbjct: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300

[Close]

BLAST of CmaCh04G016070 vs. ExPASy TrEMBL
Match: A0A1S3BFC6 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489053 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 1.0e-141
Identity = 264/300 (88.00%), Postives = 273/300 (91.00%), Query Frame = 0


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60
           MEAGIFF VTPI W+S+ K T   +RRSFPRIIRASS  SQ SYRGPKPS D VA+WVS 
Sbjct: 1   MEAGIFFTVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60

Query: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120
           N+D VRS PIYVGGISLL+VLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVL GLVW
Sbjct: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120

Query: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180
           LSIRPKSITPVNP GVE E ICSSLPD VTSELLWVWKSLSEVTCCRSLVVVYDG CI Q
Sbjct: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180

Query: 181 VGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAE AEGDGEAE VEA KLMQGLLYKG+LKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAELAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300
           AVILQPLGEKGIAI+GGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN QPAAKLSS G+
Sbjct: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300

[Close]

BLAST of CmaCh04G016070 vs. NCBI nr
Match: XP_022984820.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 593.6 bits (1529), Expect = 9.6e-166
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60
           MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60

Query: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120
           NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW
Sbjct: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120

Query: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180
           LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ
Sbjct: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180

Query: 181 VGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300
           AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300

[Close]

BLAST of CmaCh04G016070 vs. NCBI nr
Match: XP_022956789.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita moschata] >KAG6601389.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 589.0 bits (1517), Expect = 2.4e-164
Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60
           MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPS DWVAEWVSK
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSK 60

Query: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120
           NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW
Sbjct: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120

Query: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180
           LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ
Sbjct: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180

Query: 181 VGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEGDGEAEHVEASKLMQG LYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGDGEAEHVEASKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300
           AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300

[Close]

BLAST of CmaCh04G016070 vs. NCBI nr
Match: XP_023513804.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 583.9 bits (1504), Expect = 7.6e-163
Identity = 294/300 (98.00%), Postives = 296/300 (98.67%), Query Frame = 0


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60
           MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPS DWVAEWVSK
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSK 60

Query: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120
           NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW
Sbjct: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120

Query: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180
           LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLV+VYDGMCIFQ
Sbjct: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVIVYDGMCIFQ 180

Query: 181 VGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEGDG+ EHVEA KLMQG LYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300
           AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300

[Close]

BLAST of CmaCh04G016070 vs. NCBI nr
Match: KAG7032167.1 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 582.8 bits (1501), Expect = 1.7e-162
Identity = 297/301 (98.67%), Postives = 297/301 (98.67%), Query Frame = 0


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60
           MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPS DWVAEWVSK
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSK 60

Query: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120
           NND VRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW
Sbjct: 61  NNDGVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120

Query: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180
           LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ
Sbjct: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180

Query: 181 VGF-AAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNT 240
           VGF AAESAEGDGEAEHVEASKLMQG LYKGILKSQAQSYLANLSLYPGKSELPFLPSNT
Sbjct: 181 VGFAAAESAEGDGEAEHVEASKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNT 240

Query: 241 QAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRG 300
           QAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRG
Sbjct: 241 QAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRG 300

[Close]

BLAST of CmaCh04G016070 vs. NCBI nr
Match: XP_038892078.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 542.0 bits (1395), Expect = 3.3e-150
Identity = 273/300 (91.00%), Postives = 281/300 (93.67%), Query Frame = 0


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60
           MEAGIFFPVTPILWSS+ K T CPVRRSFPRIIR SS  SQ SYRGPKPSRDWVA+WVSK
Sbjct: 1   MEAGIFFPVTPILWSSNFKRTHCPVRRSFPRIIRVSSSTSQGSYRGPKPSRDWVADWVSK 60

Query: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120
           N+DAVRSLPIYVGGISLL+VLFNR VSGIAPVADASSSQSRADLLTLGLAVTNVL GLVW
Sbjct: 61  NDDAVRSLPIYVGGISLLLVLFNRTVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120

Query: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180
           LSI+PKSITPVNPQGV CERICSSLPD+V SELLWVW SLSEVTCCRSLVVVYDG CIFQ
Sbjct: 121 LSIKPKSITPVNPQGVACERICSSLPDIVKSELLWVWTSLSEVTCCRSLVVVYDGKCIFQ 180

Query: 181 VGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEGDGEAEHVEA KLMQG LY G LKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGDGEAEHVEAGKLMQGSLYTGNLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300
           AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN QP AKLSS+G+
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPTAKLSSKGN 300

[Close]

BLAST of CmaCh04G016070 vs. TAIR 10
Match: AT1G59840.1 (cofactor assembly of complex C )

HSP 1 Score: 376.3 bits (965), Expect = 2.3e-104
Identity = 194/288 (67.36%), Postives = 234/288 (81.25%), Query Frame = 0


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSRDWVAEW 60
           MEA I      I WS++ + +  P+   FPR IRASS ++     +Y GPKP ++ VA++
Sbjct: 1   MEARIILLRIQIPWSANRQFSHPPL--DFPRFIRASSSSTSQKPKTYEGPKPRKNLVADF 60

Query: 61  VSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTG 120
           +SKN+D VRSLPIYVGG SLL VLFNR VSGIAPVADASSSQSRADLL LGLAVTN+LTG
Sbjct: 61  ISKNDDLVRSLPIYVGGASLLAVLFNRTVSGIAPVADASSSQSRADLLALGLAVTNLLTG 120

Query: 121 LVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMC 180
           LVWLSIRPKSITPVNP+GVEC+ + S LP  + SELLW W+SL   TCC+SLV+VY+G+C
Sbjct: 121 LVWLSIRPKSITPVNPKGVECKVVESDLPASMVSELLWAWESLKVATCCKSLVIVYNGIC 180

Query: 181 IFQVGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPS 240
           + Q+G  AES E D +   V+  KLMQG +Y+G++KS+AQSYLANLSLYPG+SELPFLP+
Sbjct: 181 LIQIGMVAESPE-DKKTVIVKTDKLMQGSVYRGVMKSKAQSYLANLSLYPGRSELPFLPA 240

Query: 241 NTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY 286
           NTQAVILQPLG+KGIA+IGGNTIRGFT+SDQAWIS +GEKLDATL +Y
Sbjct: 241 NTQAVILQPLGDKGIAVIGGNTIRGFTSSDQAWISSIGEKLDATLGRY 285

[Close]

BLAST of CmaCh04G016070 vs. TAIR 10
Match: AT1G59840.2 (cofactor assembly of complex C )

HSP 1 Score: 376.3 bits (965), Expect = 2.3e-104
Identity = 194/288 (67.36%), Postives = 234/288 (81.25%), Query Frame = 0


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSRDWVAEW 60
           MEA I      I WS++ + +  P+   FPR IRASS ++     +Y GPKP ++ VA++
Sbjct: 1   MEARIILLRIQIPWSANRQFSHPPL--DFPRFIRASSSSTSQKPKTYEGPKPRKNLVADF 60

Query: 61  VSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTG 120
           +SKN+D VRSLPIYVGG SLL VLFNR VSGIAPVADASSSQSRADLL LGLAVTN+LTG
Sbjct: 61  ISKNDDLVRSLPIYVGGASLLAVLFNRTVSGIAPVADASSSQSRADLLALGLAVTNLLTG 120

Query: 121 LVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMC 180
           LVWLSIRPKSITPVNP+GVEC+ + S LP  + SELLW W+SL   TCC+SLV+VY+G+C
Sbjct: 121 LVWLSIRPKSITPVNPKGVECKVVESDLPASMVSELLWAWESLKVATCCKSLVIVYNGIC 180

Query: 181 IFQVGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPS 240
           + Q+G  AES E D +   V+  KLMQG +Y+G++KS+AQSYLANLSLYPG+SELPFLP+
Sbjct: 181 LIQIGMVAESPE-DKKTVIVKTDKLMQGSVYRGVMKSKAQSYLANLSLYPGRSELPFLPA 240

Query: 241 NTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY 286
           NTQAVILQPLG+KGIA+IGGNTIRGFT+SDQAWIS +GEKLDATL +Y
Sbjct: 241 NTQAVILQPLGDKGIAVIGGNTIRGFTSSDQAWISSIGEKLDATLGRY 285

The following BLAST results are available for this feature:

BLAST of CmaCh04G016070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQK9	3.2e-103	67.36	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Arabidop...	[more]

BLAST of CmaCh04G016070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J9M5	4.7e-166	100.00	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbit...	[more]
A0A6J1H029	1.1e-164	99.33	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbit...	[more]
A0A6J1DCN6	3.8e-144	84.52	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 ...	[more]
A0A5A7ST12	1.0e-141	88.00	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4 OS=Cucumis melo var. makuw...	[more]
A0A1S3BFC6	1.0e-141	88.00	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucumis ...	[more]

BLAST of CmaCh04G016070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022984820.1	9.6e-166	100.00	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita ...	[more]
XP_022956789.1	2.4e-164	99.33	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita ...	[more]
XP_023513804.1	7.6e-163	98.00	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita ...	[more]
KAG7032167.1	1.7e-162	98.67	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita ...	[more]
XP_038892078.1	3.3e-150	91.00	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 ...	[more]

BLAST of CmaCh04G016070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G59840.1	2.3e-104	67.36	cofactor assembly of complex C	[more]
AT1G59840.2	2.3e-104	67.36	cofactor assembly of complex C	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021325	Cofactor assembly of complex C subunit B, CCB2/CCB4	PFAM	PF11152	CCB2_CCB4	coord: 68..278 e-value: 3.3E-58 score: 196.2
IPR044705	COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4	PANTHER	PTHR34943	FAMILY NOT NAMED	coord: 1..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G016070.1	CmaCh04G016070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010190	cytochrome b6f complex assembly
cellular_component	GO:0009507	chloroplast