CmaCh04G013070 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G013070
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionF-box protein At2g35280-like
LocationCma_Chr04: 6653706 .. 6654670 (-)
RNA-Seq ExpressionCmaCh04G013070
SyntenyCmaCh04G013070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGGTTTCCTGAATCCAAAATCACAGGCTCTTGACTCTCAAATTTCACGGTACGTTAGCTTAATTTTTGCATGTATGCTTTTTTATTAATAAAAATTATTTGATTGTTTTTCGTCAAGAGTTTTGAATAATAAATTTATTACCGTGGTTGTGACCTGCTTCTGTCAATTTGGTGGCTGCTAGAGCTCTTCTTTAAGTTTGTTTCCCTCTAATTTATGATGTGTAGGACAACTAAGATGATGCGTTTCAGTGATTTTCCACCGACCATAGAATCACTCCCAAACGATTTATTGATTGAAGTTCTAGCAAAAGTTGCTGCTTTTTCATTCACGGACTTAATCCAAGCCAAATTAGCCACCAAGGATTTTCTCAAAGCATCAAGTCATGGCTACATATTCGAGCACGCGTCCTTTGGAAACTTCCATAAGCTTCTATGGAAAAACAGCATAGAGTTTTGGTCGTTCATGGAAAAATGTAACAACAACGGAAACCCAGAGACTCTATACCAGACGGGAATGTTGGAATTCTTCACCCATTCTAGAGAAGCTTTTGGAATAGCATATTTAAAGCTTTCTGCCCAAAAAGGCTACCCGAAAGCTTGTTACGTATACGGCATCATTTTGTACGCAACGAGTTTGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGTTTAAATTGGCTGAATGTCGTCGAAGAGTTAGGGAATTTGTTCGTTATCTTTGGATTAAGAACAAGATTTCTTTGCCGAAAAAGGATTTCGTTGATCAGAGGGGCAGTGAGAGTGTGGTTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGGTGAGAACGATGAGGATGATTATTATGGAGAACACACGTGTGAAGCGTGTAAATGGAATGAAGAAGTTTCGAGATTTTGTAATATGCTTAGAACCGGGAGTTATGATATGTTGTAG

mRNA sequence

ATGGCCGGTTTCCTGAATCCAAAATCACAGGCTCTTGACTCTCAAATTTCACGGACAACTAAGATGATGCGTTTCAGTGATTTTCCACCGACCATAGAATCACTCCCAAACGATTTATTGATTGAAGTTCTAGCAAAAGTTGCTGCTTTTTCATTCACGGACTTAATCCAAGCCAAATTAGCCACCAAGGATTTTCTCAAAGCATCAAGTCATGGCTACATATTCGAGCACGCGTCCTTTGGAAACTTCCATAAGCTTCTATGGAAAAACAGCATAGAGTTTTGGTCGTTCATGGAAAAATGTAACAACAACGGAAACCCAGAGACTCTATACCAGACGGGAATGTTGGAATTCTTCACCCATTCTAGAGAAGCTTTTGGAATAGCATATTTAAAGCTTTCTGCCCAAAAAGGCTACCCGAAAGCTTGTTACGTATACGGCATCATTTTGTACGCAACGAGTTTGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGTTTAAATTGGCTGAATGTCGTCGAAGAGTTAGGGAATTTGTTCGTTATCTTTGGATTAAGAACAAGATTTCTTTGCCGAAAAAGGATTTCGTTGATCAGAGGGGCAGTGAGAGTGTGGTTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGGTGAGAACGATGAGGATGATTATTATGGAGAACACACGTGTGAAGCGTGTAAATGGAATGAAGAAGTTTCGAGATTTTGTAATATGCTTAGAACCGGGAGTTATGATATGTTGTAG

Coding sequence (CDS)

ATGGCCGGTTTCCTGAATCCAAAATCACAGGCTCTTGACTCTCAAATTTCACGGACAACTAAGATGATGCGTTTCAGTGATTTTCCACCGACCATAGAATCACTCCCAAACGATTTATTGATTGAAGTTCTAGCAAAAGTTGCTGCTTTTTCATTCACGGACTTAATCCAAGCCAAATTAGCCACCAAGGATTTTCTCAAAGCATCAAGTCATGGCTACATATTCGAGCACGCGTCCTTTGGAAACTTCCATAAGCTTCTATGGAAAAACAGCATAGAGTTTTGGTCGTTCATGGAAAAATGTAACAACAACGGAAACCCAGAGACTCTATACCAGACGGGAATGTTGGAATTCTTCACCCATTCTAGAGAAGCTTTTGGAATAGCATATTTAAAGCTTTCTGCCCAAAAAGGCTACCCGAAAGCTTGTTACGTATACGGCATCATTTTGTACGCAACGAGTTTGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGTTTAAATTGGCTGAATGTCGTCGAAGAGTTAGGGAATTTGTTCGTTATCTTTGGATTAAGAACAAGATTTCTTTGCCGAAAAAGGATTTCGTTGATCAGAGGGGCAGTGAGAGTGTGGTTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGGTGAGAACGATGAGGATGATTATTATGGAGAACACACGTGTGAAGCGTGTAAATGGAATGAAGAAGTTTCGAGATTTTGTAATATGCTTAGAACCGGGAGTTATGATATGTTGTAG

Protein sequence

MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRRVREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEACKWNEEVSRFCNMLRTGSYDML
Homology
BLAST of CmaCh04G013070 vs. ExPASy Swiss-Prot
Match: Q9FXC7 (Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.0e-13
Identity = 42/120 (35.00%), Postives = 67/120 (55.83%), Query Frame = 0

Query: 32  IESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFGNFHKLLW-KN 91
           ++SLP DLL+E+ +   A S + +   +L +K F +     Y+F   S      L W +N
Sbjct: 24  LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83

Query: 92  SIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPKACYVYGIIL 151
           S +   F+E+C  + NPE L+Q G + +F    +  G+ YL  +A+KG  +A YVYG+IL
Sbjct: 84  SAK---FIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVIL 140

BLAST of CmaCh04G013070 vs. ExPASy TrEMBL
Match: A0A6J1H022 (putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458700 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.8e-121
Identity = 211/241 (87.55%), Postives = 221/241 (91.70%), Query Frame = 0

Query: 22  MMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFG 81
           M RFSDFPPTIESLPNDLLIEVLAKVAAFSFTDL+QAKLATK+FL+ASSHGYIF+HAS  
Sbjct: 1   MARFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLVQAKLATKEFLEASSHGYIFQHASLR 60

Query: 82  NFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPK 141
           NF KLLW N+ EFWSFMEKCNNNGNPETLYQ GMLEFFT+ REA G+AYLKLSAQKGY +
Sbjct: 61  NFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFFTYCREASGMAYLKLSAQKGYSE 120

Query: 142 ACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRRVREFVRYLWIKNKISLPKKDF 201
           ACYVYGIILY  S EDEGVKFLKICEAKLGFKLAECRRRV+E VRYLW+KNKISL KKD 
Sbjct: 121 ACYVYGIILYTASSEDEGVKFLKICEAKLGFKLAECRRRVKELVRYLWVKNKISLSKKDS 180

Query: 202 VDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEACKWNEEVSRFCNMLRTGSYDM 261
            DQRG ESVVKNCCKKNVRRIGW  NDEDDYYGEHTCEACKWNEEVSRFCNMLRTGSYDM
Sbjct: 181 SDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYGEHTCEACKWNEEVSRFCNMLRTGSYDM 240

Query: 262 L 263
           L
Sbjct: 241 L 241

BLAST of CmaCh04G013070 vs. ExPASy TrEMBL
Match: A0A6J1JRX4 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.4e-118
Identity = 207/262 (79.01%), Postives = 229/262 (87.40%), Query Frame = 0

Query: 1   MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
           MAG L  KSQAL SQISR TK  R S  PP IESLPNDLLIE+LAKVAA S+TDL+QAKL
Sbjct: 1   MAGSLKRKSQALGSQISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKL 60

Query: 61  ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
           ATK FL+ASSH YIF+HAS  NFHKLLW NS EFWSFMEKCNNNGNPETLY+ GMLEFFT
Sbjct: 61  ATKKFLEASSHNYIFQHASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFT 120

Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
           H REA G+ YLK+SAQKGY +ACYVYGIILYATS+EDEGVKFLKICE KLGFKLAECRRR
Sbjct: 121 HCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRR 180

Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
           V+EFVR+LW+KNKIS+ +K   D+RG E+V+KNCCKKNVRRIGW  NDED+YYGE+TCEA
Sbjct: 181 VKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEA 240

Query: 241 CKWNEEVSRFCNMLRTGSYDML 263
           CKWN EV RFCNMLRTGSYD++
Sbjct: 241 CKWNGEVLRFCNMLRTGSYDIM 262

BLAST of CmaCh04G013070 vs. ExPASy TrEMBL
Match: A0A6J1JRV1 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.6e-117
Identity = 205/262 (78.24%), Postives = 228/262 (87.02%), Query Frame = 0

Query: 1   MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
           MAG L  KSQ+L S ISR TK  R S  PP IESLPNDLLIE+LAKVAA S+TDL+QAKL
Sbjct: 1   MAGSLKRKSQSLGSHISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKL 60

Query: 61  ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
           ATK FL+ASSH YIF+HAS  NFHKLLW NS EFWSFMEKCNNNGNPETLY+ GMLEFFT
Sbjct: 61  ATKKFLEASSHNYIFQHASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFT 120

Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
           H REA G+ YLK+SAQKGY +ACYVYGIILYATS+EDEGVKFLKICE KLGFKLAECRRR
Sbjct: 121 HCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRR 180

Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
           V+EFVR+LW+KNKIS+ +K   D+RG E+V+KNCCKKNVRRIGW  NDED+YYGE+TCEA
Sbjct: 181 VKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEA 240

Query: 241 CKWNEEVSRFCNMLRTGSYDML 263
           CKWN EV RFCNMLRTGSYD++
Sbjct: 241 CKWNGEVLRFCNMLRTGSYDIM 262

BLAST of CmaCh04G013070 vs. ExPASy TrEMBL
Match: A0A6J1GZQ6 (F-box protein At2g35280-like OS=Cucurbita moschata OX=3662 GN=LOC111458703 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 1.0e-116
Identity = 208/262 (79.39%), Postives = 227/262 (86.64%), Query Frame = 0

Query: 1   MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
           MAG L  KSQAL SQIS T KM RFS  PP IESLPNDLLIEVLAKVAA SFTDL+ AKL
Sbjct: 1   MAGSLKRKSQALRSQISGTIKMARFSASPPPIESLPNDLLIEVLAKVAASSFTDLVHAKL 60

Query: 61  ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
           ATK FL+ASSH YIF+HAS  NFHKLLW NS EFWSFMEKCNNNGNPETLY+ GMLEFFT
Sbjct: 61  ATKKFLEASSHNYIFQHASLENFHKLLWNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFT 120

Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
           H REA G+AYLKLSAQKGYP ACYVYGIILYATS+EDEGVKFLKICEAKLGFKLA+CR R
Sbjct: 121 HCREASGMAYLKLSAQKGYPDACYVYGIILYATSMEDEGVKFLKICEAKLGFKLAKCRGR 180

Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
           V+EF+ YLW+KNKI + + D  ++RG ESV+KNCC+KNVRRIG   NDEDDYYGEHTCEA
Sbjct: 181 VKEFIYYLWVKNKIYVLENDSSNRRGCESVIKNCCRKNVRRIGCDWNDEDDYYGEHTCEA 240

Query: 241 CKWNEEVSRFCNMLRTGSYDML 263
           CKWN EV RFCNMLRTGSY+++
Sbjct: 241 CKWNGEVLRFCNMLRTGSYNIM 262

BLAST of CmaCh04G013070 vs. ExPASy TrEMBL
Match: A0A6J1GYN4 (putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458702 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 7.1e-110
Identity = 193/241 (80.08%), Postives = 210/241 (87.14%), Query Frame = 0

Query: 22  MMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFG 81
           M RFS  PP IESLPNDLLIEVLAKVAA S+TDL+ AKLATK FL+ASSH YIF+HAS  
Sbjct: 1   MARFSASPPPIESLPNDLLIEVLAKVAACSYTDLVHAKLATKKFLEASSHNYIFQHASLE 60

Query: 82  NFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPK 141
           NFHKLLW NS EFWSFMEKCNNNGNPETLY+ GMLEFFTH REA G+AYLKLSAQKGYP 
Sbjct: 61  NFHKLLWNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMAYLKLSAQKGYPD 120

Query: 142 ACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRRVREFVRYLWIKNKISLPKKDF 201
           ACYVYGIILYA S+EDEGVKFLKICEAKLGFKLA+CR RV+EF+  LW+KNKI + + D 
Sbjct: 121 ACYVYGIILYAMSMEDEGVKFLKICEAKLGFKLAKCRGRVKEFIYCLWVKNKIYVLENDS 180

Query: 202 VDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEACKWNEEVSRFCNMLRTGSYDM 261
            D+RG ESV+KNCCKKNVRR GW  NDEDDYYGEHTCEACKWN EV RFCNMLRTGSYD+
Sbjct: 181 SDRRGCESVIKNCCKKNVRRNGWDWNDEDDYYGEHTCEACKWNGEVLRFCNMLRTGSYDI 240

Query: 262 L 263
           +
Sbjct: 241 M 241

BLAST of CmaCh04G013070 vs. NCBI nr
Match: XP_023549398.1 (putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 486.1 bits (1250), Expect = 1.9e-133
Identity = 232/262 (88.55%), Postives = 243/262 (92.75%), Query Frame = 0

Query: 1   MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
           MAGFL  KSQALDSQISRTTKM RF+DFPPTIESLPNDLLIEVLAKVAAFSFTDL+QAKL
Sbjct: 1   MAGFLKRKSQALDSQISRTTKMARFNDFPPTIESLPNDLLIEVLAKVAAFSFTDLVQAKL 60

Query: 61  ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
           ATK+FLKASSHGYIF+HAS  NF KL+W N+ EFWSFMEKCNNNGNPETLYQ GMLEFFT
Sbjct: 61  ATKEFLKASSHGYIFQHASLRNFQKLIWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFFT 120

Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
           H REA G+AYLKLSAQKGYP+ CYVYGIILYA SLEDEGVKFLKICEAKLGFKLAECRRR
Sbjct: 121 HCREASGLAYLKLSAQKGYPETCYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRR 180

Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
           V+EFVRYLW+KNKISLP+KD  DQRG ESVVKNCCKKNVRRIGW  NDEDDYY EHTCEA
Sbjct: 181 VKEFVRYLWVKNKISLPEKDSSDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYREHTCEA 240

Query: 241 CKWNEEVSRFCNMLRTGSYDML 263
           CKWNEEVSRFCNMLRTGSYDML
Sbjct: 241 CKWNEEVSRFCNMLRTGSYDML 262

BLAST of CmaCh04G013070 vs. NCBI nr
Match: XP_023549584.1 (putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 485.3 bits (1248), Expect = 3.2e-133
Identity = 232/262 (88.55%), Postives = 243/262 (92.75%), Query Frame = 0

Query: 1   MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
           MAGFL  KSQALDSQISRTTKM RF+DFPPTIESLPNDLLIEVLAKVAAFSFTDL+QAKL
Sbjct: 1   MAGFLKRKSQALDSQISRTTKMARFNDFPPTIESLPNDLLIEVLAKVAAFSFTDLVQAKL 60

Query: 61  ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
           ATK+FL+ASSHGYIF+HAS  NF KLLW N+ EFWSFMEKCNNNGNPETLY  GMLEFFT
Sbjct: 61  ATKEFLEASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYHKGMLEFFT 120

Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
           H REA G+AYLKLSAQKGYP+ACYVYGIILYA SLEDEGVKFLKICEAKLGFKLAECRRR
Sbjct: 121 HCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRR 180

Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
           V+EFVRYLW+KNKISLP+KD  DQRG ESVVKNCCKKNVRRIGW  NDEDDYYGEH CEA
Sbjct: 181 VKEFVRYLWVKNKISLPEKDSSDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYGEHMCEA 240

Query: 241 CKWNEEVSRFCNMLRTGSYDML 263
           CKWNEEVSRFCNMLRTGSYDML
Sbjct: 241 CKWNEEVSRFCNMLRTGSYDML 262

BLAST of CmaCh04G013070 vs. NCBI nr
Match: XP_023549459.1 (putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo] >XP_023549481.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 483.0 bits (1242), Expect = 1.6e-132
Identity = 231/262 (88.17%), Postives = 242/262 (92.37%), Query Frame = 0

Query: 1   MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
           MAG L  KSQALDSQISRTTKM RF+DFPPTIESLPNDLLIEVLAKVAAFSFTDL+QAKL
Sbjct: 1   MAGSLKRKSQALDSQISRTTKMARFNDFPPTIESLPNDLLIEVLAKVAAFSFTDLVQAKL 60

Query: 61  ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
           ATK+FLKASSHGYIF+HAS  NF KL+W N+ EFWSFMEKCNNNGNPETLYQ GMLEFFT
Sbjct: 61  ATKEFLKASSHGYIFQHASLRNFQKLIWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFFT 120

Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
           H REA G+AYLKLSAQKGYP+ CYVYGIILYA SLEDEGVKFLKICEAKLGFKLAECRRR
Sbjct: 121 HCREASGLAYLKLSAQKGYPETCYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRR 180

Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
           V+EFVRYLW+KNKISLP+KD  DQRG ESVVKNCCKKNVRRIGW  NDEDDYY EHTCEA
Sbjct: 181 VKEFVRYLWVKNKISLPEKDSSDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYREHTCEA 240

Query: 241 CKWNEEVSRFCNMLRTGSYDML 263
           CKWNEEVSRFCNMLRTGSYDML
Sbjct: 241 CKWNEEVSRFCNMLRTGSYDML 262

BLAST of CmaCh04G013070 vs. NCBI nr
Match: KAG6601104.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 474.6 bits (1220), Expect = 5.7e-130
Identity = 227/262 (86.64%), Postives = 239/262 (91.22%), Query Frame = 0

Query: 1   MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
           M G L  KSQALDSQISR TKM RFSDFPPTIESLPNDLLIEVLAKVA FSFTDL+QAKL
Sbjct: 1   MVGSLKRKSQALDSQISRITKMARFSDFPPTIESLPNDLLIEVLAKVATFSFTDLVQAKL 60

Query: 61  ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
           ATK FL+ASSHGYIF+HAS  NF KLLW N+ EFWSFMEKCNNNGN +TLYQ GMLEFFT
Sbjct: 61  ATKKFLEASSHGYIFQHASLRNFQKLLWNNNREFWSFMEKCNNNGNSKTLYQKGMLEFFT 120

Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
           H REA G+AYLKLSAQKGYP+ACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR
Sbjct: 121 HCREASGMAYLKLSAQKGYPEACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180

Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
           V+EFVRYLW+KNKISLP+ D  DQRG E+VVKNCCKKNVRRIGW  NDEDDYYGEHTCEA
Sbjct: 181 VKEFVRYLWVKNKISLPENDSGDQRGCENVVKNCCKKNVRRIGWDRNDEDDYYGEHTCEA 240

Query: 241 CKWNEEVSRFCNMLRTGSYDML 263
           CKWNEEVSRFCNMLRTGSYDM+
Sbjct: 241 CKWNEEVSRFCNMLRTGSYDMV 262

BLAST of CmaCh04G013070 vs. NCBI nr
Match: KAG6601108.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 458.0 bits (1177), Expect = 5.5e-125
Identity = 221/260 (85.00%), Postives = 235/260 (90.38%), Query Frame = 0

Query: 1   MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
           MAG L  KSQALDSQISR TKM RFSDFPPTIESLPNDLLIEVLAKVAAFSFT+L+QAKL
Sbjct: 1   MAGSLKRKSQALDSQISRITKMARFSDFPPTIESLPNDLLIEVLAKVAAFSFTNLVQAKL 60

Query: 61  ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
           ATK+FL+ASSHGYIF+HAS  NF KLLW N+ EFWSFMEKCNNNGNPETLYQ GMLEFFT
Sbjct: 61  ATKEFLEASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFFT 120

Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
           H REA G+ YLKLSAQKGY +ACYVYGIILYAT+LEDEGVKFLKICEAKLGFKLA+CRR 
Sbjct: 121 HCREASGMTYLKLSAQKGYLEACYVYGIILYATNLEDEGVKFLKICEAKLGFKLAKCRRS 180

Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
           V+EFVR LW+KNKISLP  D  DQRG ESVVKNCCKKNVRRIGW  NDEDDYYGEHTCEA
Sbjct: 181 VKEFVRCLWVKNKISLPVNDSGDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYGEHTCEA 240

Query: 241 CKWNEEVSRFCNMLRTGSYD 261
           CKWN EVSRFCNMLRTGS++
Sbjct: 241 CKWNGEVSRFCNMLRTGSFN 260

BLAST of CmaCh04G013070 vs. TAIR 10
Match: AT1G67623.1 (F-box family protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-14
Identity = 42/120 (35.00%), Postives = 67/120 (55.83%), Query Frame = 0

Query: 32  IESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFGNFHKLLW-KN 91
           ++SLP DLL+E+ +   A S + +   +L +K F +     Y+F   S      L W +N
Sbjct: 24  LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83

Query: 92  SIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPKACYVYGIIL 151
           S +   F+E+C  + NPE L+Q G + +F    +  G+ YL  +A+KG  +A YVYG+IL
Sbjct: 84  SAK---FIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVIL 140

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FXC72.0e-1335.00Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE... [more]
Match NameE-valueIdentityDescription
A0A6J1H0226.8e-12187.55putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458700 P... [more]
A0A6J1JRX45.4e-11879.01putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=... [more]
A0A6J1JRV14.6e-11778.24putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=... [more]
A0A6J1GZQ61.0e-11679.39F-box protein At2g35280-like OS=Cucurbita moschata OX=3662 GN=LOC111458703 PE=4 ... [more]
A0A6J1GYN47.1e-11080.08putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458702 P... [more]
Match NameE-valueIdentityDescription
XP_023549398.11.9e-13388.55putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo][more]
XP_023549584.13.2e-13388.55putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo][more]
XP_023549459.11.6e-13288.17putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo] >XP_023549481.1 pu... [more]
KAG6601104.15.7e-13086.64putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG6601108.15.5e-12585.00putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
AT1G67623.11.4e-1435.00F-box family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040338Putative F-box protein At1g67623-likePANTHERPTHR33784OS05G0482100 PROTEINcoord: 31..255
NoneNo IPR availablePANTHERPTHR33784:SF31F-BOX PROTEINcoord: 31..255
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 59..161

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G013070.1CmaCh04G013070.1mRNA