Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGGTTTCCTGAATCCAAAATCACAGGCTCTTGACTCTCAAATTTCACGGTACGTTAGCTTAATTTTTGCATGTATGCTTTTTTATTAATAAAAATTATTTGATTGTTTTTCGTCAAGAGTTTTGAATAATAAATTTATTACCGTGGTTGTGACCTGCTTCTGTCAATTTGGTGGCTGCTAGAGCTCTTCTTTAAGTTTGTTTCCCTCTAATTTATGATGTGTAGGACAACTAAGATGATGCGTTTCAGTGATTTTCCACCGACCATAGAATCACTCCCAAACGATTTATTGATTGAAGTTCTAGCAAAAGTTGCTGCTTTTTCATTCACGGACTTAATCCAAGCCAAATTAGCCACCAAGGATTTTCTCAAAGCATCAAGTCATGGCTACATATTCGAGCACGCGTCCTTTGGAAACTTCCATAAGCTTCTATGGAAAAACAGCATAGAGTTTTGGTCGTTCATGGAAAAATGTAACAACAACGGAAACCCAGAGACTCTATACCAGACGGGAATGTTGGAATTCTTCACCCATTCTAGAGAAGCTTTTGGAATAGCATATTTAAAGCTTTCTGCCCAAAAAGGCTACCCGAAAGCTTGTTACGTATACGGCATCATTTTGTACGCAACGAGTTTGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGTTTAAATTGGCTGAATGTCGTCGAAGAGTTAGGGAATTTGTTCGTTATCTTTGGATTAAGAACAAGATTTCTTTGCCGAAAAAGGATTTCGTTGATCAGAGGGGCAGTGAGAGTGTGGTTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGGTGAGAACGATGAGGATGATTATTATGGAGAACACACGTGTGAAGCGTGTAAATGGAATGAAGAAGTTTCGAGATTTTGTAATATGCTTAGAACCGGGAGTTATGATATGTTGTAG
mRNA sequence
ATGGCCGGTTTCCTGAATCCAAAATCACAGGCTCTTGACTCTCAAATTTCACGGACAACTAAGATGATGCGTTTCAGTGATTTTCCACCGACCATAGAATCACTCCCAAACGATTTATTGATTGAAGTTCTAGCAAAAGTTGCTGCTTTTTCATTCACGGACTTAATCCAAGCCAAATTAGCCACCAAGGATTTTCTCAAAGCATCAAGTCATGGCTACATATTCGAGCACGCGTCCTTTGGAAACTTCCATAAGCTTCTATGGAAAAACAGCATAGAGTTTTGGTCGTTCATGGAAAAATGTAACAACAACGGAAACCCAGAGACTCTATACCAGACGGGAATGTTGGAATTCTTCACCCATTCTAGAGAAGCTTTTGGAATAGCATATTTAAAGCTTTCTGCCCAAAAAGGCTACCCGAAAGCTTGTTACGTATACGGCATCATTTTGTACGCAACGAGTTTGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGTTTAAATTGGCTGAATGTCGTCGAAGAGTTAGGGAATTTGTTCGTTATCTTTGGATTAAGAACAAGATTTCTTTGCCGAAAAAGGATTTCGTTGATCAGAGGGGCAGTGAGAGTGTGGTTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGGTGAGAACGATGAGGATGATTATTATGGAGAACACACGTGTGAAGCGTGTAAATGGAATGAAGAAGTTTCGAGATTTTGTAATATGCTTAGAACCGGGAGTTATGATATGTTGTAG
Coding sequence (CDS)
ATGGCCGGTTTCCTGAATCCAAAATCACAGGCTCTTGACTCTCAAATTTCACGGACAACTAAGATGATGCGTTTCAGTGATTTTCCACCGACCATAGAATCACTCCCAAACGATTTATTGATTGAAGTTCTAGCAAAAGTTGCTGCTTTTTCATTCACGGACTTAATCCAAGCCAAATTAGCCACCAAGGATTTTCTCAAAGCATCAAGTCATGGCTACATATTCGAGCACGCGTCCTTTGGAAACTTCCATAAGCTTCTATGGAAAAACAGCATAGAGTTTTGGTCGTTCATGGAAAAATGTAACAACAACGGAAACCCAGAGACTCTATACCAGACGGGAATGTTGGAATTCTTCACCCATTCTAGAGAAGCTTTTGGAATAGCATATTTAAAGCTTTCTGCCCAAAAAGGCTACCCGAAAGCTTGTTACGTATACGGCATCATTTTGTACGCAACGAGTTTGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGTTTAAATTGGCTGAATGTCGTCGAAGAGTTAGGGAATTTGTTCGTTATCTTTGGATTAAGAACAAGATTTCTTTGCCGAAAAAGGATTTCGTTGATCAGAGGGGCAGTGAGAGTGTGGTTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGGTGAGAACGATGAGGATGATTATTATGGAGAACACACGTGTGAAGCGTGTAAATGGAATGAAGAAGTTTCGAGATTTTGTAATATGCTTAGAACCGGGAGTTATGATATGTTGTAG
Protein sequence
MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRRVREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEACKWNEEVSRFCNMLRTGSYDML
Homology
BLAST of CmaCh04G013070 vs. ExPASy Swiss-Prot
Match:
Q9FXC7 (Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE=4 SV=1)
HSP 1 Score: 77.8 bits (190), Expect = 2.0e-13
Identity = 42/120 (35.00%), Postives = 67/120 (55.83%), Query Frame = 0
Query: 32 IESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFGNFHKLLW-KN 91
++SLP DLL+E+ + A S + + +L +K F + Y+F S L W +N
Sbjct: 24 LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83
Query: 92 SIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPKACYVYGIIL 151
S + F+E+C + NPE L+Q G + +F + G+ YL +A+KG +A YVYG+IL
Sbjct: 84 SAK---FIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVIL 140
BLAST of CmaCh04G013070 vs. ExPASy TrEMBL
Match:
A0A6J1H022 (putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458700 PE=4 SV=1)
HSP 1 Score: 443.4 bits (1139), Expect = 6.8e-121
Identity = 211/241 (87.55%), Postives = 221/241 (91.70%), Query Frame = 0
Query: 22 MMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFG 81
M RFSDFPPTIESLPNDLLIEVLAKVAAFSFTDL+QAKLATK+FL+ASSHGYIF+HAS
Sbjct: 1 MARFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLVQAKLATKEFLEASSHGYIFQHASLR 60
Query: 82 NFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPK 141
NF KLLW N+ EFWSFMEKCNNNGNPETLYQ GMLEFFT+ REA G+AYLKLSAQKGY +
Sbjct: 61 NFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFFTYCREASGMAYLKLSAQKGYSE 120
Query: 142 ACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRRVREFVRYLWIKNKISLPKKDF 201
ACYVYGIILY S EDEGVKFLKICEAKLGFKLAECRRRV+E VRYLW+KNKISL KKD
Sbjct: 121 ACYVYGIILYTASSEDEGVKFLKICEAKLGFKLAECRRRVKELVRYLWVKNKISLSKKDS 180
Query: 202 VDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEACKWNEEVSRFCNMLRTGSYDM 261
DQRG ESVVKNCCKKNVRRIGW NDEDDYYGEHTCEACKWNEEVSRFCNMLRTGSYDM
Sbjct: 181 SDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYGEHTCEACKWNEEVSRFCNMLRTGSYDM 240
Query: 262 L 263
L
Sbjct: 241 L 241
BLAST of CmaCh04G013070 vs. ExPASy TrEMBL
Match:
A0A6J1JRX4 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=4 SV=1)
HSP 1 Score: 433.7 bits (1114), Expect = 5.4e-118
Identity = 207/262 (79.01%), Postives = 229/262 (87.40%), Query Frame = 0
Query: 1 MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
MAG L KSQAL SQISR TK R S PP IESLPNDLLIE+LAKVAA S+TDL+QAKL
Sbjct: 1 MAGSLKRKSQALGSQISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKL 60
Query: 61 ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
ATK FL+ASSH YIF+HAS NFHKLLW NS EFWSFMEKCNNNGNPETLY+ GMLEFFT
Sbjct: 61 ATKKFLEASSHNYIFQHASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFT 120
Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
H REA G+ YLK+SAQKGY +ACYVYGIILYATS+EDEGVKFLKICE KLGFKLAECRRR
Sbjct: 121 HCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRR 180
Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
V+EFVR+LW+KNKIS+ +K D+RG E+V+KNCCKKNVRRIGW NDED+YYGE+TCEA
Sbjct: 181 VKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEA 240
Query: 241 CKWNEEVSRFCNMLRTGSYDML 263
CKWN EV RFCNMLRTGSYD++
Sbjct: 241 CKWNGEVLRFCNMLRTGSYDIM 262
BLAST of CmaCh04G013070 vs. ExPASy TrEMBL
Match:
A0A6J1JRV1 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=4 SV=1)
HSP 1 Score: 430.6 bits (1106), Expect = 4.6e-117
Identity = 205/262 (78.24%), Postives = 228/262 (87.02%), Query Frame = 0
Query: 1 MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
MAG L KSQ+L S ISR TK R S PP IESLPNDLLIE+LAKVAA S+TDL+QAKL
Sbjct: 1 MAGSLKRKSQSLGSHISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKL 60
Query: 61 ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
ATK FL+ASSH YIF+HAS NFHKLLW NS EFWSFMEKCNNNGNPETLY+ GMLEFFT
Sbjct: 61 ATKKFLEASSHNYIFQHASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFT 120
Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
H REA G+ YLK+SAQKGY +ACYVYGIILYATS+EDEGVKFLKICE KLGFKLAECRRR
Sbjct: 121 HCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRR 180
Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
V+EFVR+LW+KNKIS+ +K D+RG E+V+KNCCKKNVRRIGW NDED+YYGE+TCEA
Sbjct: 181 VKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEA 240
Query: 241 CKWNEEVSRFCNMLRTGSYDML 263
CKWN EV RFCNMLRTGSYD++
Sbjct: 241 CKWNGEVLRFCNMLRTGSYDIM 262
BLAST of CmaCh04G013070 vs. ExPASy TrEMBL
Match:
A0A6J1GZQ6 (F-box protein At2g35280-like OS=Cucurbita moschata OX=3662 GN=LOC111458703 PE=4 SV=1)
HSP 1 Score: 429.5 bits (1103), Expect = 1.0e-116
Identity = 208/262 (79.39%), Postives = 227/262 (86.64%), Query Frame = 0
Query: 1 MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
MAG L KSQAL SQIS T KM RFS PP IESLPNDLLIEVLAKVAA SFTDL+ AKL
Sbjct: 1 MAGSLKRKSQALRSQISGTIKMARFSASPPPIESLPNDLLIEVLAKVAASSFTDLVHAKL 60
Query: 61 ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
ATK FL+ASSH YIF+HAS NFHKLLW NS EFWSFMEKCNNNGNPETLY+ GMLEFFT
Sbjct: 61 ATKKFLEASSHNYIFQHASLENFHKLLWNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFT 120
Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
H REA G+AYLKLSAQKGYP ACYVYGIILYATS+EDEGVKFLKICEAKLGFKLA+CR R
Sbjct: 121 HCREASGMAYLKLSAQKGYPDACYVYGIILYATSMEDEGVKFLKICEAKLGFKLAKCRGR 180
Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
V+EF+ YLW+KNKI + + D ++RG ESV+KNCC+KNVRRIG NDEDDYYGEHTCEA
Sbjct: 181 VKEFIYYLWVKNKIYVLENDSSNRRGCESVIKNCCRKNVRRIGCDWNDEDDYYGEHTCEA 240
Query: 241 CKWNEEVSRFCNMLRTGSYDML 263
CKWN EV RFCNMLRTGSY+++
Sbjct: 241 CKWNGEVLRFCNMLRTGSYNIM 262
BLAST of CmaCh04G013070 vs. ExPASy TrEMBL
Match:
A0A6J1GYN4 (putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458702 PE=4 SV=1)
HSP 1 Score: 406.8 bits (1044), Expect = 7.1e-110
Identity = 193/241 (80.08%), Postives = 210/241 (87.14%), Query Frame = 0
Query: 22 MMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFG 81
M RFS PP IESLPNDLLIEVLAKVAA S+TDL+ AKLATK FL+ASSH YIF+HAS
Sbjct: 1 MARFSASPPPIESLPNDLLIEVLAKVAACSYTDLVHAKLATKKFLEASSHNYIFQHASLE 60
Query: 82 NFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPK 141
NFHKLLW NS EFWSFMEKCNNNGNPETLY+ GMLEFFTH REA G+AYLKLSAQKGYP
Sbjct: 61 NFHKLLWNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMAYLKLSAQKGYPD 120
Query: 142 ACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRRVREFVRYLWIKNKISLPKKDF 201
ACYVYGIILYA S+EDEGVKFLKICEAKLGFKLA+CR RV+EF+ LW+KNKI + + D
Sbjct: 121 ACYVYGIILYAMSMEDEGVKFLKICEAKLGFKLAKCRGRVKEFIYCLWVKNKIYVLENDS 180
Query: 202 VDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEACKWNEEVSRFCNMLRTGSYDM 261
D+RG ESV+KNCCKKNVRR GW NDEDDYYGEHTCEACKWN EV RFCNMLRTGSYD+
Sbjct: 181 SDRRGCESVIKNCCKKNVRRNGWDWNDEDDYYGEHTCEACKWNGEVLRFCNMLRTGSYDI 240
Query: 262 L 263
+
Sbjct: 241 M 241
BLAST of CmaCh04G013070 vs. NCBI nr
Match:
XP_023549398.1 (putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 486.1 bits (1250), Expect = 1.9e-133
Identity = 232/262 (88.55%), Postives = 243/262 (92.75%), Query Frame = 0
Query: 1 MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
MAGFL KSQALDSQISRTTKM RF+DFPPTIESLPNDLLIEVLAKVAAFSFTDL+QAKL
Sbjct: 1 MAGFLKRKSQALDSQISRTTKMARFNDFPPTIESLPNDLLIEVLAKVAAFSFTDLVQAKL 60
Query: 61 ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
ATK+FLKASSHGYIF+HAS NF KL+W N+ EFWSFMEKCNNNGNPETLYQ GMLEFFT
Sbjct: 61 ATKEFLKASSHGYIFQHASLRNFQKLIWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFFT 120
Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
H REA G+AYLKLSAQKGYP+ CYVYGIILYA SLEDEGVKFLKICEAKLGFKLAECRRR
Sbjct: 121 HCREASGLAYLKLSAQKGYPETCYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRR 180
Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
V+EFVRYLW+KNKISLP+KD DQRG ESVVKNCCKKNVRRIGW NDEDDYY EHTCEA
Sbjct: 181 VKEFVRYLWVKNKISLPEKDSSDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYREHTCEA 240
Query: 241 CKWNEEVSRFCNMLRTGSYDML 263
CKWNEEVSRFCNMLRTGSYDML
Sbjct: 241 CKWNEEVSRFCNMLRTGSYDML 262
BLAST of CmaCh04G013070 vs. NCBI nr
Match:
XP_023549584.1 (putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 485.3 bits (1248), Expect = 3.2e-133
Identity = 232/262 (88.55%), Postives = 243/262 (92.75%), Query Frame = 0
Query: 1 MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
MAGFL KSQALDSQISRTTKM RF+DFPPTIESLPNDLLIEVLAKVAAFSFTDL+QAKL
Sbjct: 1 MAGFLKRKSQALDSQISRTTKMARFNDFPPTIESLPNDLLIEVLAKVAAFSFTDLVQAKL 60
Query: 61 ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
ATK+FL+ASSHGYIF+HAS NF KLLW N+ EFWSFMEKCNNNGNPETLY GMLEFFT
Sbjct: 61 ATKEFLEASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYHKGMLEFFT 120
Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
H REA G+AYLKLSAQKGYP+ACYVYGIILYA SLEDEGVKFLKICEAKLGFKLAECRRR
Sbjct: 121 HCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRR 180
Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
V+EFVRYLW+KNKISLP+KD DQRG ESVVKNCCKKNVRRIGW NDEDDYYGEH CEA
Sbjct: 181 VKEFVRYLWVKNKISLPEKDSSDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYGEHMCEA 240
Query: 241 CKWNEEVSRFCNMLRTGSYDML 263
CKWNEEVSRFCNMLRTGSYDML
Sbjct: 241 CKWNEEVSRFCNMLRTGSYDML 262
BLAST of CmaCh04G013070 vs. NCBI nr
Match:
XP_023549459.1 (putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo] >XP_023549481.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 483.0 bits (1242), Expect = 1.6e-132
Identity = 231/262 (88.17%), Postives = 242/262 (92.37%), Query Frame = 0
Query: 1 MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
MAG L KSQALDSQISRTTKM RF+DFPPTIESLPNDLLIEVLAKVAAFSFTDL+QAKL
Sbjct: 1 MAGSLKRKSQALDSQISRTTKMARFNDFPPTIESLPNDLLIEVLAKVAAFSFTDLVQAKL 60
Query: 61 ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
ATK+FLKASSHGYIF+HAS NF KL+W N+ EFWSFMEKCNNNGNPETLYQ GMLEFFT
Sbjct: 61 ATKEFLKASSHGYIFQHASLRNFQKLIWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFFT 120
Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
H REA G+AYLKLSAQKGYP+ CYVYGIILYA SLEDEGVKFLKICEAKLGFKLAECRRR
Sbjct: 121 HCREASGLAYLKLSAQKGYPETCYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRR 180
Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
V+EFVRYLW+KNKISLP+KD DQRG ESVVKNCCKKNVRRIGW NDEDDYY EHTCEA
Sbjct: 181 VKEFVRYLWVKNKISLPEKDSSDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYREHTCEA 240
Query: 241 CKWNEEVSRFCNMLRTGSYDML 263
CKWNEEVSRFCNMLRTGSYDML
Sbjct: 241 CKWNEEVSRFCNMLRTGSYDML 262
BLAST of CmaCh04G013070 vs. NCBI nr
Match:
KAG6601104.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 474.6 bits (1220), Expect = 5.7e-130
Identity = 227/262 (86.64%), Postives = 239/262 (91.22%), Query Frame = 0
Query: 1 MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
M G L KSQALDSQISR TKM RFSDFPPTIESLPNDLLIEVLAKVA FSFTDL+QAKL
Sbjct: 1 MVGSLKRKSQALDSQISRITKMARFSDFPPTIESLPNDLLIEVLAKVATFSFTDLVQAKL 60
Query: 61 ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
ATK FL+ASSHGYIF+HAS NF KLLW N+ EFWSFMEKCNNNGN +TLYQ GMLEFFT
Sbjct: 61 ATKKFLEASSHGYIFQHASLRNFQKLLWNNNREFWSFMEKCNNNGNSKTLYQKGMLEFFT 120
Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
H REA G+AYLKLSAQKGYP+ACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR
Sbjct: 121 HCREASGMAYLKLSAQKGYPEACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
V+EFVRYLW+KNKISLP+ D DQRG E+VVKNCCKKNVRRIGW NDEDDYYGEHTCEA
Sbjct: 181 VKEFVRYLWVKNKISLPENDSGDQRGCENVVKNCCKKNVRRIGWDRNDEDDYYGEHTCEA 240
Query: 241 CKWNEEVSRFCNMLRTGSYDML 263
CKWNEEVSRFCNMLRTGSYDM+
Sbjct: 241 CKWNEEVSRFCNMLRTGSYDMV 262
BLAST of CmaCh04G013070 vs. NCBI nr
Match:
KAG6601108.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 458.0 bits (1177), Expect = 5.5e-125
Identity = 221/260 (85.00%), Postives = 235/260 (90.38%), Query Frame = 0
Query: 1 MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKL 60
MAG L KSQALDSQISR TKM RFSDFPPTIESLPNDLLIEVLAKVAAFSFT+L+QAKL
Sbjct: 1 MAGSLKRKSQALDSQISRITKMARFSDFPPTIESLPNDLLIEVLAKVAAFSFTNLVQAKL 60
Query: 61 ATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFT 120
ATK+FL+ASSHGYIF+HAS NF KLLW N+ EFWSFMEKCNNNGNPETLYQ GMLEFFT
Sbjct: 61 ATKEFLEASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFFT 120
Query: 121 HSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRR 180
H REA G+ YLKLSAQKGY +ACYVYGIILYAT+LEDEGVKFLKICEAKLGFKLA+CRR
Sbjct: 121 HCREASGMTYLKLSAQKGYLEACYVYGIILYATNLEDEGVKFLKICEAKLGFKLAKCRRS 180
Query: 181 VREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEA 240
V+EFVR LW+KNKISLP D DQRG ESVVKNCCKKNVRRIGW NDEDDYYGEHTCEA
Sbjct: 181 VKEFVRCLWVKNKISLPVNDSGDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYGEHTCEA 240
Query: 241 CKWNEEVSRFCNMLRTGSYD 261
CKWN EVSRFCNMLRTGS++
Sbjct: 241 CKWNGEVSRFCNMLRTGSFN 260
BLAST of CmaCh04G013070 vs. TAIR 10
Match:
AT1G67623.1 (F-box family protein )
HSP 1 Score: 77.8 bits (190), Expect = 1.4e-14
Identity = 42/120 (35.00%), Postives = 67/120 (55.83%), Query Frame = 0
Query: 32 IESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFGNFHKLLW-KN 91
++SLP DLL+E+ + A S + + +L +K F + Y+F S L W +N
Sbjct: 24 LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83
Query: 92 SIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPKACYVYGIIL 151
S + F+E+C + NPE L+Q G + +F + G+ YL +A+KG +A YVYG+IL
Sbjct: 84 SAK---FIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVIL 140
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FXC7 | 2.0e-13 | 35.00 | Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1H022 | 6.8e-121 | 87.55 | putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458700 P... | [more] |
A0A6J1JRX4 | 5.4e-118 | 79.01 | putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=... | [more] |
A0A6J1JRV1 | 4.6e-117 | 78.24 | putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=... | [more] |
A0A6J1GZQ6 | 1.0e-116 | 79.39 | F-box protein At2g35280-like OS=Cucurbita moschata OX=3662 GN=LOC111458703 PE=4 ... | [more] |
A0A6J1GYN4 | 7.1e-110 | 80.08 | putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458702 P... | [more] |
Match Name | E-value | Identity | Description | |
XP_023549398.1 | 1.9e-133 | 88.55 | putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo] | [more] |
XP_023549584.1 | 3.2e-133 | 88.55 | putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo] | [more] |
XP_023549459.1 | 1.6e-132 | 88.17 | putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo] >XP_023549481.1 pu... | [more] |
KAG6601104.1 | 5.7e-130 | 86.64 | putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
KAG6601108.1 | 5.5e-125 | 85.00 | putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
AT1G67623.1 | 1.4e-14 | 35.00 | F-box family protein | [more] |