CmaCh04G009340 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGGTTGCCGTGATTCTACGACGGACGACGGAGTAGAATATGGACTGCCGCCGTATTAGTCAATGGTAGTGATTATAAGAGATTTGCTCTTTAAGCTCGCCTCCTTCTTGGCATCGGATCGGAGCTGCTGTTCTCTTTCCGATCACTCTCCTTCTGCCTAGAGACTCGACAGGAGCGGTTTAGTGTCCGATGAAATTCCTTCCCGAGTTCGTTTCTTGCTGCGTGCCGGTGAGCGTGTCGCGCATGGAGAATCCGGAAGCGACGGAGGCTCCGGGAGCCGAGGAGATAAGATCTCTGGCTCCGGTCACCACCAGAATACACCTGCGTAGAAGACGAGGTGCGCCGTATACTTCGGCGGCTAAAATGGCCGGCGATTGGACGCCGTCGCTAGGAGCGATCTCGGAGGATAATGTAGTTCTAGTAGTGATGGAGAGAAAGAAGAGCGAGGATCGGACGGCGGAATCAGAGCGATCTGTGAAGAGGAAGAGCGGATCTCGAAATGGAAAGGCAAGAGGAGTTCACGGACGTAACAACAGCAACGATTTTAGGTACGTACGTATGTCAGTTCGTGAATCTTCGGTATCATTATCGAAATCGTAACGATCTGTGAAATGAAAACGACGTCTGGAAAGAATCTTTTTGTTAATTTTCTCTCTCTCAGGCGAAGTCCGGCGGCCATACCGGTGGTGATTCCGGCGTTTTCTCCAACTCCGTTCTTATTCTGATGCAATTCTGCTTCGATTATCCGATCACTCAGGCTCGTGTAATATATGTGCATATTTGCATAACTCAATTGCATCGTAATAATGATTTGTATAATCAATAAAAAAATTGATTAGAAAAAGGTGAGGTTGAGGAGGAAACTTATCCCTGGAATTGTAGCTTGTTGGTTCAACTGCTCTCTGCAATTTTAAATCTTCCCATTTCTAC CGGGTTGCCGTGATTCTACGACGGACGACGGAGTAGAATATGGACTGCCGCCGTATTAGTCAATGGTAGTGATTATAAGAGATTTGCTCTTTAAGCTCGCCTCCTTCTTGGCATCGGATCGGAGCTGCTGTTCTCTTTCCGATCACTCTCCTTCTGCCTAGAGACTCGACAGGAGCGGTTTAGTGTCCGATGAAATTCCTTCCCGAGTTCGTTTCTTGCTGCGTGCCGGTGAGCGTGTCGCGCATGGAGAATCCGGAAGCGACGGAGGCTCCGGGAGCCGAGGAGATAAGATCTCTGGCTCCGGTCACCACCAGAATACACCTGCGTAGAAGACGAGGTGCGCCGTATACTTCGGCGGCTAAAATGGCCGGCGATTGGACGCCGTCGCTAGGAGCGATCTCGGAGGATAATGTAGTTCTAGTAGTGATGGAGAGAAAGAAGAGCGAGGATCGGACGGCGGAATCAGAGCGATCTGTGAAGAGGAAGAGCGGATCTCGAAATGGAAAGGCAAGAGGAGTTCACGGACGTAACAACAGCAACGATTTTAGGCGAAGTCCGGCGGCCATACCGGTGGTGATTCCGGCGTTTTCTCCAACTCCGTTCTTATTCTGATGCAATTCTGCTTCGATTATCCGATCACTCAGGCTCGTGTAATATATGTGCATATTTGCATAACTCAATTGCATCGTAATAATGATTTGTATAATCAATAAAAAAATTGATTAGAAAAAGGTGAGGTTGAGGAGGAAACTTATCCCTGGAATTGTAGCTTGTTGGTTCAACTGCTCTCTGCAATTTTAAATCTTCCCATTTCTAC ATGAAATTCCTTCCCGAGTTCGTTTCTTGCTGCGTGCCGGTGAGCGTGTCGCGCATGGAGAATCCGGAAGCGACGGAGGCTCCGGGAGCCGAGGAGATAAGATCTCTGGCTCCGGTCACCACCAGAATACACCTGCGTAGAAGACGAGGTGCGCCGTATACTTCGGCGGCTAAAATGGCCGGCGATTGGACGCCGTCGCTAGGAGCGATCTCGGAGGATAATGTAGTTCTAGTAGTGATGGAGAGAAAGAAGAGCGAGGATCGGACGGCGGAATCAGAGCGATCTGTGAAGAGGAAGAGCGGATCTCGAAATGGAAAGGCAAGAGGAGTTCACGGACGTAACAACAGCAACGATTTTAGGCGAAGTCCGGCGGCCATACCGGTGGTGATTCCGGCGTTTTCTCCAACTCCGTTCTTATTCTGA MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPVTTRIHLRRRRGAPYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF Homology
BLAST of CmaCh04G009340 vs. ExPASy TrEMBL
Match: A0A6J1JUN0 (uncharacterized protein LOC111489053 OS=Cucurbita maxima OX=3661 GN=LOC111489053 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 1.5e-69 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of CmaCh04G009340 vs. ExPASy TrEMBL
Match: A0A6J1FP47 (uncharacterized protein LOC111447225 OS=Cucurbita moschata OX=3662 GN=LOC111447225 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 4.0e-67 Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0
BLAST of CmaCh04G009340 vs. ExPASy TrEMBL
Match: A0A6J1EVT0 (uncharacterized protein LOC111438455 OS=Cucurbita moschata OX=3662 GN=LOC111438455 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 4.2e-53 Identity = 111/140 (79.29%), Postives = 128/140 (91.43%), Query Frame = 0
BLAST of CmaCh04G009340 vs. ExPASy TrEMBL
Match: A0A6J1JD62 (uncharacterized protein LOC111483313 OS=Cucurbita maxima OX=3661 GN=LOC111483313 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 1.0e-51 Identity = 109/140 (77.86%), Postives = 126/140 (90.00%), Query Frame = 0
BLAST of CmaCh04G009340 vs. ExPASy TrEMBL
Match: A0A0A0L6G1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G094500 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.8e-46 Identity = 104/143 (72.73%), Postives = 123/143 (86.01%), Query Frame = 0
BLAST of CmaCh04G009340 vs. NCBI nr
Match: XP_022992846.1 (uncharacterized protein LOC111489053 [Cucurbita maxima]) HSP 1 Score: 271.9 bits (694), Expect = 3.0e-69 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of CmaCh04G009340 vs. NCBI nr
Match: XP_022942037.1 (uncharacterized protein LOC111447225 [Cucurbita moschata]) HSP 1 Score: 263.8 bits (673), Expect = 8.2e-67 Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0
BLAST of CmaCh04G009340 vs. NCBI nr
Match: XP_023526044.1 (uncharacterized protein LOC111789638 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 262.3 bits (669), Expect = 2.4e-66 Identity = 136/140 (97.14%), Postives = 137/140 (97.86%), Query Frame = 0
BLAST of CmaCh04G009340 vs. NCBI nr
Match: KAG6600756.1 (hypothetical protein SDJN03_05989, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 258.1 bits (658), Expect = 4.5e-65 Identity = 134/140 (95.71%), Postives = 136/140 (97.14%), Query Frame = 0
BLAST of CmaCh04G009340 vs. NCBI nr
Match: XP_022932132.1 (uncharacterized protein LOC111438455 [Cucurbita moschata] >XP_023520436.1 uncharacterized protein LOC111783825 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 217.2 bits (552), Expect = 8.8e-53 Identity = 111/140 (79.29%), Postives = 128/140 (91.43%), Query Frame = 0
BLAST of CmaCh04G009340 vs. TAIR 10
Match: AT5G54585.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 5.9e-07 Identity = 47/145 (32.41%), Postives = 66/145 (45.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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