CmaCh04G009200 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G009200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Wound-responsive family protein
Location	Cma_Chr04: 4754274 .. 4754546 (-)
RNA-Seq Expression	CmaCh04G009200
Synteny	CmaCh04G009200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAAGAGCGCAGCTTGCAGAGCGTGGTTCGTGGCCGCGAGCATCGGCGCCGTCGAGGCCTTGAAGGATCAAGGCGTCTGCCGGTGGAACAACGTCATCAAATCTCTCCAACAACACGGAAAGACCAAGCTCAGATCTTACTACCCAGCCAAGAAGATCTCTGCTTCCTCTTCTTCAGCCATTGGCAACCAGATGAAGAGGTCTCGCGAGGAAAAAATGAGGAAAGTCATGGACTTGAGCTGTTTGGGTCCCAGTACCATCAGATTCTAG

mRNA sequence

ATGTCTAAGAGCGCAGCTTGCAGAGCGTGGTTCGTGGCCGCGAGCATCGGCGCCGTCGAGGCCTTGAAGGATCAAGGCGTCTGCCGGTGGAACAACGTCATCAAATCTCTCCAACAACACGGAAAGACCAAGCTCAGATCTTACTACCCAGCCAAGAAGATCTCTGCTTCCTCTTCTTCAGCCATTGGCAACCAGATGAAGAGGTCTCGCGAGGAAAAAATGAGGAAAGTCATGGACTTGAGCTGTTTGGGTCCCAGTACCATCAGATTCTAG

Coding sequence (CDS)

ATGTCTAAGAGCGCAGCTTGCAGAGCGTGGTTCGTGGCCGCGAGCATCGGCGCCGTCGAGGCCTTGAAGGATCAAGGCGTCTGCCGGTGGAACAACGTCATCAAATCTCTCCAACAACACGGAAAGACCAAGCTCAGATCTTACTACCCAGCCAAGAAGATCTCTGCTTCCTCTTCTTCAGCCATTGGCAACCAGATGAAGAGGTCTCGCGAGGAAAAAATGAGGAAAGTCATGGACTTGAGCTGTTTGGGTCCCAGTACCATCAGATTCTAG

Protein sequence

MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSSAIGNQMKRSREEKMRKVMDLSCLGPSTIRF

Homology

[Close]

BLAST of CmaCh04G009200 vs. ExPASy TrEMBL
Match: A0A6J1JZW3 (uncharacterized protein LOC111489778 OS=Cucurbita maxima OX=3661 GN=LOC111489778 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.2e-42
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60
          MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60

Query: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 91
          AIGNQMKRSREEKMRKVMDLSCLGPSTIRF
Sbjct: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CmaCh04G009200 vs. ExPASy TrEMBL
Match: A0A6J1FVH7 (uncharacterized protein LOC111447671 OS=Cucurbita moschata OX=3662 GN=LOC111447671 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 87/90 (96.67%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60
          MSKSAACRAWFVAASIGAVEA KDQGVCRWNNVIKSLQQHGKTKLRSYY AKKISASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEASKDQGVCRWNNVIKSLQQHGKTKLRSYYQAKKISASSSS 60

Query: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 91
          AIGNQMKR REEKMRKVMDLSCLGPSTIRF
Sbjct: 61 AIGNQMKRCREEKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CmaCh04G009200 vs. ExPASy TrEMBL
Match: A0A0A0L594 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099650 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.2e-37
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60
          MS+SA CRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTK+RSYY AKK+SASSSS
Sbjct: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60

Query: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 91
          AI NQ+K+SRE+KMRKVMDLSCLGPSTIRF
Sbjct: 61 AIANQIKKSREDKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CmaCh04G009200 vs. ExPASy TrEMBL
Match: A0A5A7TZR6 (Putative wound-induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00840 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.0e-36
Identity = 79/90 (87.78%), Postives = 85/90 (94.44%), Query Frame = 0


Query: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60
          MS+SA CRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTK+RSYY AKK+SASSSS
Sbjct: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60

Query: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 91
          AI  Q+ +SRE+KMRKVMDLSCLGPSTIRF
Sbjct: 61 AIAYQINKSREDKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CmaCh04G009200 vs. ExPASy TrEMBL
Match: A0A6J1JD67 (uncharacterized protein LOC111483317 OS=Cucurbita maxima OX=3661 GN=LOC111483317 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.5e-35
Identity = 77/90 (85.56%), Postives = 84/90 (93.33%), Query Frame = 0


Query: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60
          MS+SAACRAWFVAASIGAVEA+KDQGVCRWNN+IKSL QHG +KLRSYY AKK+SASSSS
Sbjct: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGSSKLRSYYQAKKLSASSSS 60

Query: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 91
          AI NQ+ +SREEKMRKVMDL CLGPSTIRF
Sbjct: 61 AISNQINKSREEKMRKVMDLGCLGPSTIRF 90

[Close]

BLAST of CmaCh04G009200 vs. NCBI nr
Match: XP_022993930.1 (uncharacterized protein LOC111489778 [Cucurbita maxima])

HSP 1 Score: 179.1 bits (453), Expect = 1.7e-41
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60
          MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60

Query: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 91
          AIGNQMKRSREEKMRKVMDLSCLGPSTIRF
Sbjct: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CmaCh04G009200 vs. NCBI nr
Match: KAG7031383.1 (hypothetical protein SDJN02_05423, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 173.7 bits (439), Expect = 7.1e-40
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60
          MSKSAACRAWFVAASIGAVEA KDQGVCRWNNVIKSLQQHGKTKLRSYY AKKISASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEASKDQGVCRWNNVIKSLQQHGKTKLRSYYQAKKISASSSS 60

Query: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 91
          AIGNQMKRSREEKMRKVMDLSCLGPSTIRF
Sbjct: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CmaCh04G009200 vs. NCBI nr
Match: XP_023538267.1 (uncharacterized protein LOC111799095 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.9 bits (437), Expect = 1.2e-39
Identity = 87/90 (96.67%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60
          MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTK RSYY AKKISASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKFRSYYQAKKISASSSS 60

Query: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 91
          AIGNQMKRSREEK+RKVMDLSCLGPSTIRF
Sbjct: 61 AIGNQMKRSREEKVRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CmaCh04G009200 vs. NCBI nr
Match: XP_022942717.1 (uncharacterized protein LOC111447671 [Cucurbita moschata] >XP_022942718.1 uncharacterized protein LOC111447671 [Cucurbita moschata])

HSP 1 Score: 171.8 bits (434), Expect = 2.7e-39
Identity = 87/90 (96.67%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60
          MSKSAACRAWFVAASIGAVEA KDQGVCRWNNVIKSLQQHGKTKLRSYY AKKISASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEASKDQGVCRWNNVIKSLQQHGKTKLRSYYQAKKISASSSS 60

Query: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 91
          AIGNQMKR REEKMRKVMDLSCLGPSTIRF
Sbjct: 61 AIGNQMKRCREEKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CmaCh04G009200 vs. NCBI nr
Match: XP_038877273.1 (uncharacterized protein LOC120069557 [Benincasa hispida])

HSP 1 Score: 166.8 bits (421), Expect = 8.7e-38
Identity = 83/90 (92.22%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 1   MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60
           MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTK RSYY AKK+SASSSS
Sbjct: 74  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKFRSYYQAKKLSASSSS 133

Query: 61  AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 91
           AI NQ+ +SREEKMRKVMDLSCLGPSTIRF
Sbjct: 134 AIANQINKSREEKMRKVMDLSCLGPSTIRF 163

[Close]

BLAST of CmaCh04G009200 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 81.3 bits (199), Expect = 4.5e-16
Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 4  SAACRAWFVAASIGAVEALKDQ-GVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSSAI 63
          S+A + W VAASIGAVEALKDQ GVCRWN VI+S  Q+ +  LRS   AKK+S SSS   
Sbjct: 2  SSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLS-SSSIDY 61

Query: 64 GNQMKRSREEKMRKVMDLSCLGPS 87
           N+ K++ EE +R VM LSC GPS
Sbjct: 62 TNKTKQA-EESLRTVMYLSCWGPS 83

[Close]

BLAST of CmaCh04G009200 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 75.5 bits (184), Expect = 2.5e-14
Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 4  SAACRAWFVAASIGAVEALKDQ-GVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSSAI 63
          S+  +AW VA SIGAVEALKDQ G+CRWN +++S+ QH +  +RS    K+ S+SS SA 
Sbjct: 2  SSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAA 61

Query: 64 -----GNQMKRSREEKMRKVMDLSCLGPS 87
                ++  +  EE +R VM LSC GP+
Sbjct: 62 VTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of CmaCh04G009200 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein )

HSP 1 Score: 61.6 bits (148), Expect = 3.7e-10
Identity = 34/88 (38.64%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 9  AWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSY----YPAKKISASSSSAIGN 68
          +W VA +I AVE LKDQGV RWN + + L +    ++R+      P+   S+SS+++I +
Sbjct: 8  SWAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRS 67

Query: 69 QMKRSR--EEKMRKVMDLSCLGPSTIRF 91
          +   +   E    K M LSC GP+T+RF
Sbjct: 68 KPLSTTPFETSFEKAMGLSCFGPTTVRF 95

[Close]

BLAST of CmaCh04G009200 vs. TAIR 10
Match: AT2G14070.1 (wound-responsive protein-related )

HSP 1 Score: 46.6 bits (109), Expect = 1.2e-05
Identity = 37/100 (37.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 1   MSKSAACR--AWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLR-----SYYPAKK 60
           MS +A+ R  +W VA +I AVE        RWN  ++   +  + +LR     S  P+  
Sbjct: 104 MSAAASTRHTSWMVATAIAAVET-------RWNYPLRFFNKDVRARLRAIAVTSRPPSSA 163

Query: 61  ISASSSSA---IGNQMKRSREEKMRKVMDLSCLGPSTIRF 91
            S+SSSSA     N      E  M +VM LSC GP+T+RF
Sbjct: 164 SSSSSSSADLVKENHPMPKSEASMERVMCLSCFGPTTVRF 196

The following BLAST results are available for this feature:

BLAST of CmaCh04G009200 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh04G009200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZW3	8.2e-42	100.00	uncharacterized protein LOC111489778 OS=Cucurbita maxima OX=3661 GN=LOC111489778...	[more]
A0A6J1FVH7	1.3e-39	96.67	uncharacterized protein LOC111447671 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]
A0A0A0L594	1.2e-37	90.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099650 PE=4 SV=1	[more]
A0A5A7TZR6	4.0e-36	87.78	Putative wound-induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1JD67	1.5e-35	85.56	uncharacterized protein LOC111483317 OS=Cucurbita maxima OX=3661 GN=LOC111483317...	[more]

BLAST of CmaCh04G009200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993930.1	1.7e-41	100.00	uncharacterized protein LOC111489778 [Cucurbita maxima]	[more]
KAG7031383.1	7.1e-40	97.78	hypothetical protein SDJN02_05423, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023538267.1	1.2e-39	96.67	uncharacterized protein LOC111799095 [Cucurbita pepo subsp. pepo]	[more]
XP_022942717.1	2.7e-39	96.67	uncharacterized protein LOC111447671 [Cucurbita moschata] >XP_022942718.1 unchar...	[more]
XP_038877273.1	8.7e-38	92.22	uncharacterized protein LOC120069557 [Benincasa hispida]	[more]

BLAST of CmaCh04G009200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10265.1	4.5e-16	59.52	Wound-responsive family protein	[more]
AT4G10270.1	2.5e-14	47.19	Wound-responsive family protein	[more]
AT4G33560.1	3.7e-10	38.64	Wound-responsive family protein	[more]
AT2G14070.1	1.2e-05	37.00	wound-responsive protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 12..85 e-value: 9.4E-26 score: 90.6
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 4..90
None	No IPR available	PANTHER	PTHR33090:SF69	WOUND-RESPONSIVE FAMILY PROTEIN	coord: 4..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G009200.1	CmaCh04G009200.1	mRNA