CmaCh04G009040 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G009040
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-type domain-containing protein
Location	Cma_Chr04: 4703906 .. 4704508 (+)
RNA-Seq Expression	CmaCh04G009040
Synteny	CmaCh04G009040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCCTCAAGCCCTTACTACTGTTCCACAATCCAACCCTCCTCCTTCAACCCTCCCGTTCCTCACCGCCTTCTCGATCGTCATCGTCATCATCATCTCCATTGTCATCTTCTCCATCCTCGCCTCCTTTTCCATCATCATATTCATCTTCGTCTTGTGTCAATACCTAATCGGGTCAACGAACTTAGATGGGCACCATCTTGACGATCTTGACGTCGAAGCAGGCGAGAGAAACCAAAACCAAAACAATAACCAAAACCAAAACCAAAACCAAAACCAAACCATGCGGGGTAGAAGTTTGGTATCTCGATACGAAAGCAACATTTGGAGGGAGGCATTGGAGAGAACAATGGCGGAGAGGAAGGGGCGTAGAGCACAAATTGTAATGAAAATGGCAACGAGGGTGAGGTATGGCAGCTCGGAGGTGGCGGCGAAATACACCGACTGTGCAATATGTTTGGAGGAGTTTGAGAATGGAGAGGATTGCCAGATTTTTGTCGTGTGTAAACACATTTTTCATTACTCTTGTATTCAACGTTGGCTTAGGAGGAACATGACTTGTCCTATTTGTCGTTCTCCTATTGCCAATCAAAACTGCTGA

mRNA sequence

ATGATCCCTCAAGCCCTTACTACTGTTCCACAATCCAACCCTCCTCCTTCAACCCTCCCGTTCCTCACCGCCTTCTCGATCGTCATCGTCATCATCATCTCCATTGTCATCTTCTCCATCCTCGCCTCCTTTTCCATCATCATATTCATCTTCGTCTTGTGTCAATACCTAATCGGGTCAACGAACTTAGATGGGCACCATCTTGACGATCTTGACGTCGAAGCAGGCGAGAGAAACCAAAACCAAAACAATAACCAAAACCAAAACCAAAACCAAAACCAAACCATGCGGGGTAGAAGTTTGGTATCTCGATACGAAAGCAACATTTGGAGGGAGGCATTGGAGAGAACAATGGCGGAGAGGAAGGGGCGTAGAGCACAAATTGTAATGAAAATGGCAACGAGGGTGAGGTATGGCAGCTCGGAGGTGGCGGCGAAATACACCGACTGTGCAATATGTTTGGAGGAGTTTGAGAATGGAGAGGATTGCCAGATTTTTGTCGTGTGTAAACACATTTTTCATTACTCTTGTATTCAACGTTGGCTTAGGAGGAACATGACTTGTCCTATTTGTCGTTCTCCTATTGCCAATCAAAACTGCTGA

Coding sequence (CDS)

ATGATCCCTCAAGCCCTTACTACTGTTCCACAATCCAACCCTCCTCCTTCAACCCTCCCGTTCCTCACCGCCTTCTCGATCGTCATCGTCATCATCATCTCCATTGTCATCTTCTCCATCCTCGCCTCCTTTTCCATCATCATATTCATCTTCGTCTTGTGTCAATACCTAATCGGGTCAACGAACTTAGATGGGCACCATCTTGACGATCTTGACGTCGAAGCAGGCGAGAGAAACCAAAACCAAAACAATAACCAAAACCAAAACCAAAACCAAAACCAAACCATGCGGGGTAGAAGTTTGGTATCTCGATACGAAAGCAACATTTGGAGGGAGGCATTGGAGAGAACAATGGCGGAGAGGAAGGGGCGTAGAGCACAAATTGTAATGAAAATGGCAACGAGGGTGAGGTATGGCAGCTCGGAGGTGGCGGCGAAATACACCGACTGTGCAATATGTTTGGAGGAGTTTGAGAATGGAGAGGATTGCCAGATTTTTGTCGTGTGTAAACACATTTTTCATTACTCTTGTATTCAACGTTGGCTTAGGAGGAACATGACTTGTCCTATTTGTCGTTCTCCTATTGCCAATCAAAACTGCTGA

Protein sequence

MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQNQTMRGRSLVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQNC

Homology

[Close]

BLAST of CmaCh04G009040 vs. ExPASy Swiss-Prot
Match: Q9LZV8 (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 117 TMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYS 176
           T+A+R G + + + K      YGS EV    T+CAICL EF +GE  ++   C H FH S
Sbjct: 73  TVADRAGLKKRELKKFPV-AEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMS 132

Query: 177 CIQRWLRRNMTCPICR 193
           CI  WL  + +CP CR
Sbjct: 133 CIDTWLVSHSSCPNCR 147

[Close]

BLAST of CmaCh04G009040 vs. ExPASy Swiss-Prot
Match: Q9FGJ6 (RING-H2 finger protein ATL79 OS=Arabidopsis thaliana OX=3702 GN=ATL79 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-10
Identity = 29/66 (43.94%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 134 TRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRS 193
           T V     E+A    +CAICL EFE GE  Q+   C+H FH  CI +WL    +CP CR+
Sbjct: 91  TLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRT 150

Query: 194 PIANQN 200
            I +Q+
Sbjct: 151 SIFSQH 156

[Close]

BLAST of CmaCh04G009040 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09
Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 149 DCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQ 199
           +CAICL EFE+ E  ++   C H+FH  CI  WL  ++TCP+CR+ +A Q
Sbjct: 127 ECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQ 176

[Close]

BLAST of CmaCh04G009040 vs. ExPASy Swiss-Prot
Match: Q8LGA5 (E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 24/50 (48.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 149 DCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQ 199
           +CAICL EFE+ E  ++   C H+FH  CI  WL+ ++TCP+CR+ +A Q
Sbjct: 123 ECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQ 172

[Close]

BLAST of CmaCh04G009040 vs. ExPASy Swiss-Prot
Match: Q8W571 (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3)

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-09
Identity = 29/78 (37.18%), Postives = 44/78 (56.41%), Query Frame = 0


Query: 119 AERKGRRAQIVMKMATRVRYGS---SEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHY 178
           + R+G     V++      Y S   S++ +K  +CAICL E E+ E  ++  +C H+FH 
Sbjct: 90  SSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHI 149

Query: 179 SCIQRWLRRNMTCPICRS 194
            CI  WL  + TCP+CRS
Sbjct: 150 DCIDTWLYSHATCPVCRS 167

[Close]

BLAST of CmaCh04G009040 vs. ExPASy TrEMBL
Match: A0A5A7UZF7 (Putative RING-H2 finger protein ATL19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005240 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.9e-51
Identity = 123/203 (60.59%), Postives = 148/203 (72.91%), Query Frame = 0


Query: 1   MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGS 60
           MIPQAL TVPQSNPPPS LPFLTAFSIVIVI ISI+IFS++ASF+IIIFI+++C+YLIGS
Sbjct: 1   MIPQAL-TVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGS 60

Query: 61  TNLDGHHLDDLDVEAGERNQNQN---NNQNQNQNQNQTMRGRSLVSRYESNIWREALERT 120
           T+LD H     D+EAGE N+NQ     ++    +   +  GR ++ R ESN WRE +ERT
Sbjct: 61  TSLDEH---VSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERT 120

Query: 121 MAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSC 180
           +         ++ K+A  V YGSSEV AK  DCAICLE+FENGE CQ F VC HIFHYSC
Sbjct: 121 I---------MIEKVAAPVSYGSSEVVAKCIDCAICLEDFENGELCQNFPVCNHIFHYSC 180

Query: 181 IQRWLRRNMTCPICRSPIANQNC 201
           IQ WL++NMTCPICR  I N  C
Sbjct: 181 IQHWLKKNMTCPICRCSIVNDKC 190

[Close]

BLAST of CmaCh04G009040 vs. ExPASy TrEMBL
Match: A0A0A0L6M6 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104950 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 4.1e-49
Identity = 119/200 (59.50%), Postives = 146/200 (73.00%), Query Frame = 0


Query: 1   MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGS 60
           MIPQAL TVPQSNPPPS LPFLTAFSIVIVI I+I+IFS++ASF+II+ I+V+C+YLIGS
Sbjct: 1   MIPQAL-TVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGS 60

Query: 61  TNLDGHHLDDLDVEAGERNQNQ---NNNQNQNQNQNQTMRGRSLVSRYESNIWREALERT 120
           T+LDGH     ++EAGE N+NQ     ++    +   +  GR ++ R ESN WRE +ERT
Sbjct: 61  TSLDGH---SSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDIMERSESNAWREDMERT 120

Query: 121 MAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSC 180
           +         ++ K+A  V YGSSE A K  DCAICLE+FENGE CQ F VC HIFHYSC
Sbjct: 121 I---------MIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSC 180

Query: 181 IQRWLRRNMTCPICRSPIAN 198
           IQ WL++NMTCPICR  I N
Sbjct: 181 IQHWLKKNMTCPICRCSIVN 187

[Close]

BLAST of CmaCh04G009040 vs. ExPASy TrEMBL
Match: A0A5D3BTV2 (Putative RING-H2 finger protein ATL19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00260 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 4.8e-34
Identity = 100/171 (58.48%), Postives = 123/171 (71.93%), Query Frame = 0


Query: 1   MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGS 60
           MIPQAL TVPQSNPPPS LPFLTAFSIVIVI ISI+IFS++ASF+IIIFI+++C+YLIGS
Sbjct: 1   MIPQAL-TVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGS 60

Query: 61  TNLDGHHLDDLDVEAGERNQNQN---NNQNQNQNQNQTMRGRSLVSRYESNIWREALERT 120
           T+LD H     D+EAGE N+NQ     ++    +   +  GR ++ R ESN WRE +ERT
Sbjct: 61  TSLDEH---VSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERT 120

Query: 121 MAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVV 169
           +         ++ K+A  V YGSSEV AK  DCAICLE+FENGE CQ F V
Sbjct: 121 I---------MIEKVAAPVSYGSSEVVAKCIDCAICLEDFENGELCQNFPV 158

[Close]

BLAST of CmaCh04G009040 vs. ExPASy TrEMBL
Match: E5GBS2 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 8.2e-34
Identity = 99/169 (58.58%), Postives = 122/169 (72.19%), Query Frame = 0


Query: 1   MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGS 60
           MIPQAL TVPQSNPPPS LPFLTAFSIVIVI ISI+IFS++ASF+IIIFI+++C+YLIGS
Sbjct: 1   MIPQAL-TVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGS 60

Query: 61  TNLDGHHLDDLDVEAGERNQNQN---NNQNQNQNQNQTMRGRSLVSRYESNIWREALERT 120
           T+LD H     D+EAGE N+NQ     ++    +   +  GR ++ R ESN WRE +ERT
Sbjct: 61  TSLDEH---VSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERT 120

Query: 121 MAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIF 167
           +         ++ K+A  V YGSSEV AK  DCAICLE+FENGE CQ F
Sbjct: 121 I---------MIEKVAAPVSYGSSEVVAKCIDCAICLEDFENGELCQNF 156

[Close]

BLAST of CmaCh04G009040 vs. ExPASy TrEMBL
Match: A0A7N2R922 (RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.4e-17
Identity = 74/207 (35.75%), Postives = 109/207 (52.66%), Query Frame = 0


Query: 1   MIPQALTTVPQSNPPPSTLPF------LTAFSIVIVIIISIVIFSILASFSIIIFIFVL- 60
           M+PQA   +  S PP     F      L    + I+III  +IF +++ F  I+ + ++ 
Sbjct: 4   MVPQASVQLLPSLPPDPLSSFDSFVAALLTIILFIIIIIFFIIFILMSLFYFILIVTIIT 63

Query: 61  CQYLIGSTNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQNQTMRGRSLVSRYESNIWREA 120
           C++L        H     D+E GER  +Q  +   +  Q           R    IW  +
Sbjct: 64  CEFLSWFNERRDH-----DLEEGERTIHQPEDNLHSSRQAGV--------RSNLRIW-AS 123

Query: 121 LERTMAE---RKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCK 180
           L+R + +   RK +  Q + K+ + V YGS EVA+ Y  C ICLEEFENG+ CQ+F  C 
Sbjct: 124 LDRIIEDIEARKRQNQQALEKLPSPVNYGSKEVASAYIVCVICLEEFENGQSCQVFSQCN 183

Query: 181 HIFHYSCIQRWLRRNMTCPICRSPIAN 198
           HIFH +CI RWL+R +TCPICR  +++
Sbjct: 184 HIFHSNCIGRWLKRRLTCPICRVSVSD 196

[Close]

BLAST of CmaCh04G009040 vs. NCBI nr
Match: KAG6600727.1 (putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 339.0 bits (868), Expect = 2.9e-89
Identity = 184/199 (92.46%), Postives = 184/199 (92.46%), Query Frame = 0


Query: 1   MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGS 60
           MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGS
Sbjct: 1   MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGS 60

Query: 61  TNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQNQTMRGRSLVSRYESNIWREALERTMAE 120
           TNLDGHH   LDVEAGER          NQNQNQTMRGRSLVSRYESNIWREALERTMAE
Sbjct: 61  TNLDGHH---LDVEAGER----------NQNQNQTMRGRSLVSRYESNIWREALERTMAE 120

Query: 121 RKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQR 180
           RKGRRAQIVMKMATRVRYG SEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQR
Sbjct: 121 RKGRRAQIVMKMATRVRYGCSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQR 180

Query: 181 WLRRNMTCPICRSPIANQN 200
           WLRRNMTCPICRSPIAN N
Sbjct: 181 WLRRNMTCPICRSPIANHN 186

[Close]

BLAST of CmaCh04G009040 vs. NCBI nr
Match: KAG7031368.1 (RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 269.2 bits (687), Expect = 2.8e-68
Identity = 154/168 (91.67%), Postives = 154/168 (91.67%), Query Frame = 0


Query: 1   MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGS 60
           MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGS
Sbjct: 1   MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGS 60

Query: 61  TNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQNQTMRGRSLVSRYESNIWREALERTMAE 120
           TNLDGHH   LDVEAGER          NQNQNQTMRGRSLVSRYESNIWREALERTMAE
Sbjct: 61  TNLDGHH---LDVEAGER----------NQNQNQTMRGRSLVSRYESNIWREALERTMAE 120

Query: 121 RKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVV 169
           RKGRRAQIVMKMATRVRYG SEVAAKYTDCAICLEEFENGEDCQIFVV
Sbjct: 121 RKGRRAQIVMKMATRVRYGCSEVAAKYTDCAICLEEFENGEDCQIFVV 155

[Close]

BLAST of CmaCh04G009040 vs. NCBI nr
Match: KAA0060638.1 (putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa])

HSP 1 Score: 212.2 bits (539), Expect = 4.0e-51
Identity = 123/203 (60.59%), Postives = 148/203 (72.91%), Query Frame = 0


Query: 1   MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGS 60
           MIPQAL TVPQSNPPPS LPFLTAFSIVIVI ISI+IFS++ASF+IIIFI+++C+YLIGS
Sbjct: 1   MIPQAL-TVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGS 60

Query: 61  TNLDGHHLDDLDVEAGERNQNQN---NNQNQNQNQNQTMRGRSLVSRYESNIWREALERT 120
           T+LD H     D+EAGE N+NQ     ++    +   +  GR ++ R ESN WRE +ERT
Sbjct: 61  TSLDEH---VSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERT 120

Query: 121 MAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSC 180
           +         ++ K+A  V YGSSEV AK  DCAICLE+FENGE CQ F VC HIFHYSC
Sbjct: 121 I---------MIEKVAAPVSYGSSEVVAKCIDCAICLEDFENGELCQNFPVCNHIFHYSC 180

Query: 181 IQRWLRRNMTCPICRSPIANQNC 201
           IQ WL++NMTCPICR  I N  C
Sbjct: 181 IQHWLKKNMTCPICRCSIVNDKC 190

[Close]

BLAST of CmaCh04G009040 vs. NCBI nr
Match: KAG6577373.1 (putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 174.9 bits (442), Expect = 7.1e-40
Identity = 106/194 (54.64%), Postives = 128/194 (65.98%), Query Frame = 0


Query: 10  PQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLD 69
           P  NPPPS LPFLT+FSI+I+I +SI+IFS+LASF+II+ ++ +C+YL+  T LD H   
Sbjct: 4   PPLNPPPSILPFLTSFSIIILIFVSIIIFSVLASFAIIVLVYFICKYLVHPTYLDEH--- 63

Query: 70  DLDVEAGERNQNQNNNQNQNQNQNQTMRGRSLVSR-------YESNIWREALERTMAERK 129
           D  + A ER          NQNQ+Q+ R R LVS         E+  WRE L     ERK
Sbjct: 64  DPVLVADER----------NQNQSQSTRTRILVSHPTRHGGDVENASWREGL-----ERK 123

Query: 130 GRRAQIVMKMAT-RVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRW 189
           G R Q + K  T  V YGSSE  AK+ DCAICLE+FE GE CQIF VC HIFHY CIQRW
Sbjct: 124 GLREQALKKTTTVLVSYGSSEATAKFVDCAICLEDFEKGELCQIFPVCNHIFHYCCIQRW 179

Query: 190 LRRNMTCPICRSPI 196
           L++NMTCPICR  I
Sbjct: 184 LKKNMTCPICRCSI 179

[Close]

BLAST of CmaCh04G009040 vs. NCBI nr
Match: KAG7027690.1 (putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-39
Identity = 105/198 (53.03%), Postives = 129/198 (65.15%), Query Frame = 0


Query: 10  PQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLD 69
           P  NPPPS LPFLT+FSI+I+I +SI+IFS+LASF+II+ ++ +C+YL+  T LD H   
Sbjct: 4   PPLNPPPSILPFLTSFSIIILIFVSIIIFSVLASFAIIVLVYFICRYLVHPTYLDEH--- 63

Query: 70  DLDVEAGERNQNQNNNQNQNQNQNQTMRGRSLVSR-------YESNIWREALERTMAERK 129
           D  + A ER          NQNQ+Q+ R R LVS         E+  WRE L     ERK
Sbjct: 64  DPILVADER----------NQNQSQSTRTRILVSHPTRHGGDVENASWREGL-----ERK 123

Query: 130 GRRAQIVMKMAT-RVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRW 189
           G R Q + K  T  V YGSSE  AK+ DCAICLE+FE GE CQIF VC HIFHY CIQRW
Sbjct: 124 GLREQALEKTTTVLVSYGSSEATAKFVDCAICLEDFEKGELCQIFPVCNHIFHYCCIQRW 183

Query: 190 LRRNMTCPICRSPIANQN 200
           L++NMTCPIC   I  ++
Sbjct: 184 LKKNMTCPICHDSIITES 183

[Close]

BLAST of CmaCh04G009040 vs. TAIR 10
Match: AT4G33565.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.8e-12
Identity = 27/63 (42.86%), Postives = 37/63 (58.73%), Query Frame = 0


Query: 137 RYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIA 196
           +Y   +   + TDC++CL EFE  E  ++   CKH FH  CI  WLR +  CP+CR+PI 
Sbjct: 204 QYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIV 263

Query: 197 NQN 200
             N
Sbjct: 264 EAN 266

[Close]

BLAST of CmaCh04G009040 vs. TAIR 10
Match: AT5G01880.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 8.7e-12
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 117 TMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYS 176
           T+A+R G + + + K      YGS EV    T+CAICL EF +GE  ++   C H FH S
Sbjct: 73  TVADRAGLKKRELKKFPV-AEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMS 132

Query: 177 CIQRWLRRNMTCPICR 193
           CI  WL  + +CP CR
Sbjct: 133 CIDTWLVSHSSCPNCR 147

[Close]

BLAST of CmaCh04G009040 vs. TAIR 10
Match: AT5G47610.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-11
Identity = 29/66 (43.94%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 134 TRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRS 193
           T V     E+A    +CAICL EFE GE  Q+   C+H FH  CI +WL    +CP CR+
Sbjct: 91  TLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRT 150

Query: 194 PIANQN 200
            I +Q+
Sbjct: 151 SIFSQH 156

[Close]

BLAST of CmaCh04G009040 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 9.7e-11
Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 149 DCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQ 199
           +CAICL EFE+ E  ++   C H+FH  CI  WL  ++TCP+CR+ +A Q
Sbjct: 127 ECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQ 176

[Close]

BLAST of CmaCh04G009040 vs. TAIR 10
Match: AT4G40070.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 29/78 (37.18%), Postives = 44/78 (56.41%), Query Frame = 0


Query: 119 AERKGRRAQIVMKMATRVRYGS---SEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHY 178
           + R+G     V++      Y S   S++ +K  +CAICL E E+ E  ++  +C H+FH 
Sbjct: 90  SSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHI 149

Query: 179 SCIQRWLRRNMTCPICRS 194
            CI  WL  + TCP+CRS
Sbjct: 150 DCIDTWLYSHATCPVCRS 167

The following BLAST results are available for this feature:

BLAST of CmaCh04G009040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZV8	1.2e-10	43.42	RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1	[more]
Q9FGJ6	1.6e-10	43.94	RING-H2 finger protein ATL79 OS=Arabidopsis thaliana OX=3702 GN=ATL79 PE=2 SV=1	[more]
Q8RXX9	1.4e-09	48.00	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]
Q8LGA5	2.3e-09	48.00	E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 ...	[more]
Q8W571	3.0e-09	37.18	RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3	[more]

BLAST of CmaCh04G009040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZF7	1.9e-51	60.59	Putative RING-H2 finger protein ATL19 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0L6M6	4.1e-49	59.50	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104950 P...	[more]
A0A5D3BTV2	4.8e-34	58.48	Putative RING-H2 finger protein ATL19 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
E5GBS2	8.2e-34	58.58	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A7N2R922	5.4e-17	35.75	RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of CmaCh04G009040 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600727.1	2.9e-89	92.46	putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7031368.1	2.8e-68	91.67	RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAA0060638.1	4.0e-51	60.59	putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]	[more]
KAG6577373.1	7.1e-40	54.64	putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7027690.1	1.2e-39	53.03	putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. ar...	[more]

BLAST of CmaCh04G009040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33565.1	1.8e-12	42.86	RING/U-box superfamily protein	[more]
AT5G01880.1	8.7e-12	43.42	RING/U-box superfamily protein	[more]
AT5G47610.1	1.1e-11	43.94	RING/U-box superfamily protein	[more]
AT3G05200.1	9.7e-11	48.00	RING/U-box superfamily protein	[more]
AT4G40070.1	2.2e-10	37.18	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 150..191 e-value: 3.4E-6 score: 36.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 149..192 e-value: 3.4E-14 score: 52.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 150..192 score: 13.374458
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 125..199 e-value: 2.8E-20 score: 73.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..99
None	No IPR available	PANTHER	PTHR45798:SF72	ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED	coord: 15..195
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 15..195
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 149..192 e-value: 1.35674E-15 score: 65.7861
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 149..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G009040.1	CmaCh04G009040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane