CmaCh04G006830 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G006830
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionLong chain acyl-CoA synthetase 4-like protein
LocationCma_Chr04: 3478506 .. 3481413 (-)
RNA-Seq ExpressionCmaCh04G006830
SyntenyCmaCh04G006830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACTAAACCACTTACTACTGAAGCAATTGCCATAACTGAGAAGAAGATGGACATGGCTTTAGGTTGGCCTTCAAATTCTTGCATCGGTTTCTCCGTTTATTTGAAAATTTATTGAGTTTTCTTTTTCTACTTCTTTTTGTTGAAATAGACGACATTATCAAGATGTCCAAAAATACTGGAAATAAAGGAAGGAAGCAAAGAAGGTTTCCGGTAAGAACCTGTTTTCTTTTGCATGCGTTTAACCCGAGCAATTTATTGTTGAAATTGGAAGTTTCCTTTTTATTATTATCTAATAATGATTCGTCTTTTATATGCCAGAACAAAATGCAGAAATTTCCAAATAACGCCACTCAGGATAGACCTAGGAAGTTGCAGCGATTCATGGACGCTAGAACCTCTCTTAGACAGGTTTGTACAGTTATTCAACTTGATTATCATTTATTTTACTTATTTTGTATGACTGGTCCTGAATTTTCATTTTATTTAGGGGGCTTTTGCCAAAAGGAGGTCAAATTTTCAAGGGAATCAGTTTGCATTGGCAACCGAGGTTGCAAGAAAGGCTGCAGTTGCTCCTATTCGGCCTAGAGCCTTTAACCGTTGGGTGCCCAATTGGAAGAAGACAAGGTATTGTCTGTGCTTATTGCTAGTCTACGCAAGCTTCTCATTGTGAATTATGATTATACTTTTTACTCCAATTCTAATTTAGAAACGAACAGTTGAATTTGGTGGATGGTTGGTGTGATGTGATATTTCATGTTATGGCAGGTAAATTGCGTTTATGAAAAATTGGTGACTTCTACAATGTCCATCAAGTTTTACTATATGAAGTTAGCGCAGTAATTTGTTGGTTGGAACAACTGTGTGATAGTTTTGCTTCAACCAGTTAAAATGGAGTGGGGAGTATTTCCACTTATTTCATTTCTTCCATGCTGCCTGGGAATTGATTCTGCTTTATCTTCTTAAGTTTGGTTTTGGAATTCATCGATAGTCTTTTGGTTTTCTGATGAGTAAGTTGTTGATGGGATTGTTACAGCAAGTGGGACAAAAGTGGGAAAATTTGAATGAAATTGACTGCTGCACCATCTGGAAAAAAGTCTAAAAATAGCTTTTGTGTGTTTTGAGTTTTTGCTCCTTATTAAATGTGGTGATTGTCTTGGATCACTCAATTCTTCATAGACACAACGGTAGAGGAGCCTCAGCCTGTTACCCTTTGGTTGAGGATGTTGAATCTGCTTTGTAACATGTGATGTTTTAACACACCAGAGGACTATTCCACAATAGGCTTGTTCACCATGCTCAATGTCTGCTGTGGTCAATTTCCATTCCTGGTGGATGACAATTGCCATATCTCTTTATGCTTTCATTATTTCCTGCACAGAGCCAAGGGGCTGTGGTGATCTTGAATTTACGCTTCTTTGTAACCATTCTAGTGCACTGTCTACTAGTTTCCTTGATTCCTCATGCGGTTCCCTTTTCATCCACCATCACATCCTGGAAATATTAGCCAGCCCTTCAACTACCTTGTTTTGACAAATTTAAGTTCACTTCTTGACCAGCCATAGAACTGCAAATGACTGGAAAATTTTTTACTTCTGAACCAAATGCTTCTATCAAACTTTTCTAGTCAGCTTGGCCAGGGGAAGTTGCTGTTTCATCATCTTTAATTGATCCTTGAGGGTGGAATCGAAATTTTGCTTACTGCAAGGTCGATTCCAGTAGTAATTTTGTGGTAAAAGTGCTGAGAAAAATTATGAATGGTTAGTGAAAATATGTTGAACAGTGGCATTTATGGCCTTCTTCTGTGAGGTATTATGTGTAGATTTTGGGGTCTAGTCAGTGGAATACCCTAGTTCTGCAGAAGTTCTTCATGCTGCTTATATCATATCCTGGTTGAAGCCTCCATTTTCTTGTTCAAGTTCAGATATTCTGTTCAGATATTTTGGTGATTGATTTGAGGTTTTGGGTGTGTCTATGTTACCGGAAAGTGCTTTTTTGGATCCAATCAAGCGTAACTATGAGCTGATTCACATTTTTTTGATGAGTGCTTCTCCTGATCTGGTTTGTGTTTTATTTCCATTGTTGGGTTCGGTTTGAATTTGCTTACGAGGTAAGGATTCTCTATCTGCCATCATACTCACGCGATGACATGTTGAAGATTATTGGTGTTTGTGAAATTCAGATATGGATACTTGTTTGACTAGCAGGTCTGAATATAAATGATATTTTTTCTGTTCCTTCAACCATTTGAATAATTCTTTGTATAGGGTTGAAGCTCCACCCGTTCAGAGAAAGCCATTTAATAATGGAACCTTCATTCCCAAGATAGCTGCACCAGTCCAGACGCAAACAAATGCTACACCGAGACAGAAGCCACAAACCCTCGACTCACTGTTTGCCAACATGAAGGAACAGAGATTGAGGGTGTTGTCGCAGCGACAGAATGGCGGTGCACAACAACGGAATGGTGCTCGCCAGCAAAGACCTCCGTGGGGAAGAGGCCGTATTGGTAACTGAAGAATGAATGAAGACACAACAAACCTCGTACACACGATGGATTTTATTAGGGGGAAATGCAGATGTCCGATAGATATAGGTTGATAGTGGATTAGAGAATCCAGTTGTTTCTTTGTCATTATGTTTAATCCATCCAAACGCTTGTTCTTTTACCAGTTTTCTAGCTTCATTATGTACCCAAGACGATATAGATTTGTACCTGCAGTCAGTTCATGTAAAGTTCTTTTCTTTTTCCTTCCCTTTTTTTTTTCTTGCTTCATGGCCTAATTTCCCAACCTGTTCCGTGTTCTATTTCATTGGCTAATGCAGTGTAACGTTACTTAGTTTCATTGTCTTTGTCTATTATACTTGGTGTTTCATTGTCTTTATCTATTATACTTGGTGTCTAG

mRNA sequence

ATGGCGACTAAACCACTTACTACTGAAGCAATTGCCATAACTGAGAAGAAGATGGACATGGCTTTAGACGACATTATCAAGATGTCCAAAAATACTGGAAATAAAGGAAGGAAGCAAAGAAGGTTTCCGAACAAAATGCAGAAATTTCCAAATAACGCCACTCAGGATAGACCTAGGAAGTTGCAGCGATTCATGGACGCTAGAACCTCTCTTAGACAGGGGGCTTTTGCCAAAAGGAGGTCAAATTTTCAAGGGAATCAGTTTGCATTGGCAACCGAGGTTGCAAGAAAGGCTGCAGTTGCTCCTATTCGGCCTAGAGCCTTTAACCGTTGGGTGCCCAATTGGAAGAAGACAAGGTATTGTCTGTGCTTATTGCTAGTAAATTGCGTTTATGAAAAATTGGTGACTTCTACAATGTCCATCAAGTTTTACTATATGAAGTTAGCGCAGTAATTTGTTGGTTGGAACAACTGTGTGATAGTTTTGCTTCAACCAGTTAAAATGGAGTGGGGAGTATTTCCACTTATTTCATTTCTTCCATGCTGCCTGGGAATTGATTCTGCTTTATCTTCTTAAGTTTGGTTTTGGAATTCATCGATAGTCTTTTGGTTTTCTGATGAGTAAGTTGTTGATGGGATTGTTACAGCAAGTGGGACAAAAGTGGGAAAATTTGAATGAAATTGACTGCTGCACCATCTGGAAAAAAGTCTAAAAATAGCTTTTGTGTGTTTTGAGTTTTTGCTCCTTATTAAATGTGGTGATTGTCTTGGATCACTCAATTCTTCATAGACACAACGGTAGAGGAGCCTCAGCCTGTTACCCTTTGGTTGAGGATGTTGAATCTGCTTTGTAACATGTGATGTTTTAACACACCAGAGGACTATTCCACAATAGGCTTGTTCACCATGCTCAATGTCTGCTGTGGTCAATTTCCATTCCTGGTGGATGACAATTGCCATATCTCTTTATGCTTTCATTATTTCCTGCACAGAGCCAAGGGGCTGTGGTGATCTTGAATTTACGCTTCTTTGTAACCATTCTAGTGCACTGTCTACTAGTTTCCTTGATTCCTCATGCGGTTCCCTTTTCATCCACCATCACATCCTGGAAATATTAGCCAGCCCTTCAACTACCTTGTTTTGACAAATTTAAGTTCACTTCTTGACCAGCCATAGAACTGCAAATGACTGGAAAATTTTTTACTTCTGAACCAAATGCTTCTATCAAACTTTTCTAGTCAGCTTGGCCAGGGGAAGTTGCTGTTTCATCATCTTTAATTGATCCTTGAGGGTGGAATCGAAATTTTGCTTACTGCAAGGTCGATTCCAGTAGTAATTTTGTGGTAAAAGTGCTGAGAAAAATTATGAATGGTTAGTGAAAATATGTTGAACAGTGGCATTTATGGCCTTCTTCTGTGAGGTATTATGTGTAGATTTTGGGGTCTAGTCAGTGGAATACCCTAGTTCTGCAGAAGTTCTTCATGCTGCTTATATCATATCCTGGTTGAAGCCTCCATTTTCTTGTTCAAGTTCAGATATTCTGTTCAGATATTTTGGTGATTGATTTGAGGTTTTGGGTGTGTCTATGTTACCGGAAAGTGCTTTTTTGGATCCAATCAAGCGTAACTATGAGCTGATTCACATTTTTTTGATGAGTGCTTCTCCTGATCTGGTTTGTGTTTTATTTCCATTGTTGGGTTCGGTTTGAATTTGCTTACGAGGTAAGGATTCTCTATCTGCCATCATACTCACGCGATGACATGTTGAAGATTATTGGTGTTTGTGAAATTCAGATATGGATACTTGTTTGACTAGCAGGTCTGAATATAAATGATATTTTTTCTGTTCCTTCAACCATTTGAATAATTCTTTGTATAGGGTTGAAGCTCCACCCGTTCAGAGAAAGCCATTTAATAATGGAACCTTCATTCCCAAGATAGCTGCACCAGTCCAGACGCAAACAAATGCTACACCGAGACAGAAGCCACAAACCCTCGACTCACTGTTTGCCAACATGAAGGAACAGAGATTGAGGGTGTTGTCGCAGCGACAGAATGGCGGTGCACAACAACGGAATGGTGCTCGCCAGCAAAGACCTCCGTGGGGAAGAGGCCGTATTGGTAACTGAAGAATGAATGAAGACACAACAAACCTCGTACACACGATGGATTTTATTAGGGGGAAATGCAGATGTCCGATAGATATAGGTTGATAGTGGATTAGAGAATCCAGTTGTTTCTTTGTCATTATGTTTAATCCATCCAAACGCTTGTTCTTTTACCAGTTTTCTAGCTTCATTATGTACCCAAGACGATATAGATTTGTACCTGCAGTCAGTTCATGTAAAGTTCTTTTCTTTTTCCTTCCCTTTTTTTTTTCTTGCTTCATGGCCTAATTTCCCAACCTGTTCCGTGTTCTATTTCATTGGCTAATGCAGTGTAACGTTACTTAGTTTCATTGTCTTTGTCTATTATACTTGGTGTTTCATTGTCTTTATCTATTATACTTGGTGTCTAG

Coding sequence (CDS)

ATGGCGACTAAACCACTTACTACTGAAGCAATTGCCATAACTGAGAAGAAGATGGACATGGCTTTAGACGACATTATCAAGATGTCCAAAAATACTGGAAATAAAGGAAGGAAGCAAAGAAGGTTTCCGAACAAAATGCAGAAATTTCCAAATAACGCCACTCAGGATAGACCTAGGAAGTTGCAGCGATTCATGGACGCTAGAACCTCTCTTAGACAGGGGGCTTTTGCCAAAAGGAGGTCAAATTTTCAAGGGAATCAGTTTGCATTGGCAACCGAGGTTGCAAGAAAGGCTGCAGTTGCTCCTATTCGGCCTAGAGCCTTTAACCGTTGGGTGCCCAATTGGAAGAAGACAAGGTATTGTCTGTGCTTATTGCTAGTAAATTGCGTTTATGAAAAATTGGTGACTTCTACAATGTCCATCAAGTTTTACTATATGAAGTTAGCGCAGTAA

Protein sequence

MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRKLQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTRYCLCLLLVNCVYEKLVTSTMSIKFYYMKLAQ
Homology
[Close]
BLAST of CmaCh04G006830 vs. ExPASy TrEMBL
Match: A0A6J1J5N5 (uncharacterized protein LOC111481570 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481570 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.1e-58
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60
           MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK
Sbjct: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR 120
           LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR
Sbjct: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR 119

[Close]
BLAST of CmaCh04G006830 vs. ExPASy TrEMBL
Match: A0A6J1IXQ4 (uncharacterized protein LOC111481570 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481570 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.1e-58
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60
           MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK
Sbjct: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR 120
           LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR
Sbjct: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR 119

[Close]
BLAST of CmaCh04G006830 vs. ExPASy TrEMBL
Match: A0A6J1FPB6 (uncharacterized protein LOC111447019 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447019 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.4e-54
Identity = 115/119 (96.64%), Postives = 115/119 (96.64%), Query Frame = 0 

Query: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60
           MA KPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR 120
           LQRFMDARTSLRQGA AKRRSNFQGNQFALATEVAR AAVAPIRPRAFNR VPNWKKTR
Sbjct: 61  LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTR 119

[Close]
BLAST of CmaCh04G006830 vs. ExPASy TrEMBL
Match: A0A6J1FLY6 (uncharacterized protein LOC111447019 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447019 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.4e-54
Identity = 115/119 (96.64%), Postives = 115/119 (96.64%), Query Frame = 0 

Query: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60
           MA KPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR 120
           LQRFMDARTSLRQGA AKRRSNFQGNQFALATEVAR AAVAPIRPRAFNR VPNWKKTR
Sbjct: 61  LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTR 119

[Close]
BLAST of CmaCh04G006830 vs. ExPASy TrEMBL
Match: A0A5A7TPS5 (Pentatricopeptide repeat (PPR) superfamily protein isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001910 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.3e-51
Identity = 109/119 (91.60%), Postives = 111/119 (93.28%), Query Frame = 0 

Query: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60
           MA KPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRR PNKMQKFPNNATQDRPRK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRLPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR 120
           LQRFMD+R+SLRQGA A RRSNFQGNQFALATEVARKAAVAPIRPRAF R  PNW KTR
Sbjct: 61  LQRFMDSRSSLRQGALANRRSNFQGNQFALATEVARKAAVAPIRPRAFTRRAPNWNKTR 119

[Close]
BLAST of CmaCh04G006830 vs. NCBI nr
Match: XP_022982836.1 (uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima] >XP_022982844.1 uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima] >XP_022982853.1 uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima])

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60
           MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK
Sbjct: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR 120
           LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR
Sbjct: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR 119

[Close]
BLAST of CmaCh04G006830 vs. NCBI nr
Match: XP_022982862.1 (uncharacterized protein LOC111481570 isoform X2 [Cucurbita maxima])

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60
           MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK
Sbjct: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR 120
           LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR
Sbjct: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR 119

[Close]
BLAST of CmaCh04G006830 vs. NCBI nr
Match: XP_022941746.1 (uncharacterized protein LOC111447019 isoform X2 [Cucurbita moschata])

HSP 1 Score: 221.5 bits (563), Expect = 5.0e-54
Identity = 115/119 (96.64%), Postives = 115/119 (96.64%), Query Frame = 0 

Query: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60
           MA KPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR 120
           LQRFMDARTSLRQGA AKRRSNFQGNQFALATEVAR AAVAPIRPRAFNR VPNWKKTR
Sbjct: 61  LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTR 119

[Close]
BLAST of CmaCh04G006830 vs. NCBI nr
Match: XP_022941743.1 (uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata] >XP_022941744.1 uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata] >XP_022941747.1 uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata])

HSP 1 Score: 221.5 bits (563), Expect = 5.0e-54
Identity = 115/119 (96.64%), Postives = 115/119 (96.64%), Query Frame = 0 

Query: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60
           MA KPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR 120
           LQRFMDARTSLRQGA AKRRSNFQGNQFALATEVAR AAVAPIRPRAFNR VPNWKKTR
Sbjct: 61  LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTR 119

[Close]
BLAST of CmaCh04G006830 vs. NCBI nr
Match: KAG7031152.1 (hypothetical protein SDJN02_05192, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221.5 bits (563), Expect = 5.0e-54
Identity = 115/119 (96.64%), Postives = 115/119 (96.64%), Query Frame = 0 

Query: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60
           MA KPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTR 120
           LQRFMDARTSLRQGA AKRRSNFQGNQFALATEVAR AAVAPIRPRAFNR VPNWKKTR
Sbjct: 61  LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTR 119

[Close]
BLAST of CmaCh04G006830 vs. TAIR 10
Match: AT4G10970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 69/112 (61.61%), Postives = 86/112 (76.79%), Query Frame = 0 

Query: 1   MAT-KPLTTEAIAITEKKMDMALDDIIKMSK-NTG-NKGRKQRRFPNKMQKFPNNATQDR 60
           MAT KP+TTE +A+TEKKMDM+LD+IIKM K NT  NKG+KQR   NK +KF + A ++ 
Sbjct: 1   MATEKPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVL-NKKEKF-SGAAKNS 60

Query: 61  PRKLQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFN 110
             K QR+MD+R+ +RQGAFAK+RSNFQGNQF + T VARKAA A  R R +N
Sbjct: 61  AVKAQRYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYN 110

[Close]
BLAST of CmaCh04G006830 vs. TAIR 10
Match: AT4G10970.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 69/112 (61.61%), Postives = 86/112 (76.79%), Query Frame = 0 

Query: 1   MAT-KPLTTEAIAITEKKMDMALDDIIKMSK-NTG-NKGRKQRRFPNKMQKFPNNATQDR 60
           MAT KP+TTE +A+TEKKMDM+LD+IIKM K NT  NKG+KQR   NK +KF + A ++ 
Sbjct: 1   MATEKPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVL-NKKEKF-SGAAKNS 60

Query: 61  PRKLQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFN 110
             K QR+MD+R+ +RQGAFAK+RSNFQGNQF + T VARKAA A  R R +N
Sbjct: 61  AVKAQRYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYN 110

[Close]
BLAST of CmaCh04G006830 vs. TAIR 10
Match: AT4G10970.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 69/112 (61.61%), Postives = 86/112 (76.79%), Query Frame = 0 

Query: 1   MAT-KPLTTEAIAITEKKMDMALDDIIKMSK-NTG-NKGRKQRRFPNKMQKFPNNATQDR 60
           MAT KP+TTE +A+TEKKMDM+LD+IIKM K NT  NKG+KQR   NK +KF + A ++ 
Sbjct: 1   MATEKPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVL-NKKEKF-SGAAKNS 60

Query: 61  PRKLQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFN 110
             K QR+MD+R+ +RQGAFAK+RSNFQGNQF + T VARKAA A  R R +N
Sbjct: 61  AVKAQRYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYN 110

[Close]
BLAST of CmaCh04G006830 vs. TAIR 10
Match: AT4G10970.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 69/112 (61.61%), Postives = 86/112 (76.79%), Query Frame = 0 

Query: 1   MAT-KPLTTEAIAITEKKMDMALDDIIKMSK-NTG-NKGRKQRRFPNKMQKFPNNATQDR 60
           MAT KP+TTE +A+TEKKMDM+LD+IIKM K NT  NKG+KQR   NK +KF + A ++ 
Sbjct: 1   MATEKPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVL-NKKEKF-SGAAKNS 60

Query: 61  PRKLQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFN 110
             K QR+MD+R+ +RQGAFAK+RSNFQGNQF + T VARKAA A  R R +N
Sbjct: 61  AVKAQRYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYN 110

[Close]
BLAST of CmaCh04G006830 vs. TAIR 10
Match: AT4G10970.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 52 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.0 bits (219), Expect = 3.6e-18
Identity = 56/94 (59.57%), Postives = 70/94 (74.47%), Query Frame = 0 

Query: 18  MDMALDDIIKMSK-NTG-NKGRKQRRFPNKMQKFPNNATQDRPRKLQRFMDARTSLRQGA 77
           MDM+LD+IIKM K NT  NKG+KQR   NK +KF + A ++   K QR+MD+R+ +RQGA
Sbjct: 1   MDMSLDEIIKMEKSNTNVNKGKKQRVL-NKKEKF-SGAAKNSAVKAQRYMDSRSDVRQGA 60

Query: 78  FAKRRSNFQGNQFALATEVARKAAVAPIRPRAFN 110
           FAK+RSNFQGNQF + T VARKAA A  R R +N
Sbjct: 61  FAKKRSNFQGNQFPVTTTVARKAASATPRGRPYN 92

The following BLAST results are available for this feature:
BLAST of CmaCh04G006830 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh04G006830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J5N56.1e-58100.00uncharacterized protein LOC111481570 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1IXQ46.1e-58100.00uncharacterized protein LOC111481570 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FPB62.4e-5496.64uncharacterized protein LOC111447019 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1FLY62.4e-5496.64uncharacterized protein LOC111447019 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A5A7TPS53.3e-5191.60Pentatricopeptide repeat (PPR) superfamily protein isoform 2 OS=Cucumis melo var... [more]
BLAST of CmaCh04G006830 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022982836.11.3e-57100.00uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima] >XP_022982844... [more]
XP_022982862.11.3e-57100.00uncharacterized protein LOC111481570 isoform X2 [Cucurbita maxima][more]
XP_022941746.15.0e-5496.64uncharacterized protein LOC111447019 isoform X2 [Cucurbita moschata][more]
XP_022941743.15.0e-5496.64uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata] >XP_0229417... [more]
KAG7031152.15.0e-5496.64hypothetical protein SDJN02_05192, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmaCh04G006830 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G10970.11.2e-2461.61unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10970.21.2e-2461.61unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10970.31.2e-2461.61unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10970.41.2e-2461.61unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G10970.53.6e-1859.57unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF07078FYTTcoord: 16..87
e-value: 1.8E-4
score: 21.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..57
NoneNo IPR availablePANTHERPTHR36048RIBOSOME MATURATION FACTORcoord: 1..119
NoneNo IPR availablePANTHERPTHR36048:SF1RIBOSOME MATURATION FACTORcoord: 1..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G006830.1CmaCh04G006830.1mRNA