CmaCh04G005190 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G005190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Maternal effect embryo arrest 9
Location	Cma_Chr04: 2636103 .. 2636546 (+)
RNA-Seq Expression	CmaCh04G005190
Synteny	CmaCh04G005190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAATTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCACCAGGCTGAGGATTATCTCGATTCCGTCATGGAAGATGCTTTGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGTTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA

mRNA sequence

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAATTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCACCAGGCTGAGGATTATCTCGATTCCGTCATGGAAGATGCTTTGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGTTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA

Coding sequence (CDS)

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAATTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCACCAGGCTGAGGATTATCTCGATTCCGTCATGGAAGATGCTTTGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGTTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA

Protein sequence

MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMHQAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

Homology

[Close]

BLAST of CmaCh04G005190 vs. ExPASy TrEMBL
Match: A0A6J1IXX5 (uncharacterized protein LOC111481629 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481629 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.1e-70
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH
Sbjct: 40  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 99

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY
Sbjct: 100 QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 159

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 160 MEAAMNSATASMRSAWKAISSNKVHPS 186

[Close]

BLAST of CmaCh04G005190 vs. ExPASy TrEMBL
Match: A0A6J1FR93 (uncharacterized protein LOC111447720 OS=Cucurbita moschata OX=3662 GN=LOC111447720 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.7e-68
Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAM 
Sbjct: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVMEDA+DEFRRFEEEFDRMAE ELQDL+DKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of CmaCh04G005190 vs. ExPASy TrEMBL
Match: A0A0A0LAB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.3e-64
Identity = 135/147 (91.84%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA+ELQHQNE +DAEIAM 
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVMEDA+DEFRRFEEEFDRMAE ELQ L+DKSEKARKMGSLMEKAA+VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of CmaCh04G005190 vs. ExPASy TrEMBL
Match: A0A6J1JCA1 (uncharacterized protein LOC111483158 OS=Cucurbita maxima OX=3661 GN=LOC111483158 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.1e-63
Identity = 134/147 (91.16%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA ELQ QNE ++AEIAM 
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVMEDA+DEFRRFEEEFDRMAE ELQ+LVDKSEKARKMGSLMEKAAA+ASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of CmaCh04G005190 vs. ExPASy TrEMBL
Match: A0A6J1E4Z9 (uncharacterized protein LOC111430656 OS=Cucurbita moschata OX=3662 GN=LOC111430656 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 134/147 (91.16%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEALISQFTFLSD+AL+DKNFDPSTIEDLMKLFEIEAY SWAA ELQ QNE ++AEIAM 
Sbjct: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVMEDA+DEFRRFEEEFDRMAE ELQ+LVDKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of CmaCh04G005190 vs. NCBI nr
Match: XP_022982937.1 (uncharacterized protein LOC111481629 isoform X1 [Cucurbita maxima] >XP_022982945.1 uncharacterized protein LOC111481629 isoform X2 [Cucurbita maxima])

HSP 1 Score: 274.2 bits (700), Expect = 6.3e-70
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH
Sbjct: 40  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 99

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY
Sbjct: 100 QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 159

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 160 MEAAMNSATASMRSAWKAISSNKVHPS 186

[Close]

BLAST of CmaCh04G005190 vs. NCBI nr
Match: XP_022942791.1 (uncharacterized protein LOC111447720 [Cucurbita moschata] >XP_022942792.1 uncharacterized protein LOC111447720 [Cucurbita moschata])

HSP 1 Score: 268.5 bits (685), Expect = 3.5e-68
Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAM 
Sbjct: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVMEDA+DEFRRFEEEFDRMAE ELQDL+DKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of CmaCh04G005190 vs. NCBI nr
Match: KAG6600354.1 (hypothetical protein SDJN03_05587, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.8 bits (678), Expect = 2.3e-67
Identity = 142/147 (96.60%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAM 
Sbjct: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAED+LDSVMEDA+DEFR+FEEEFDRMAE ELQDLVDKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of CmaCh04G005190 vs. NCBI nr
Match: KAG7031013.1 (hypothetical protein SDJN02_05052, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264.6 bits (675), Expect = 5.0e-67
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAM 
Sbjct: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAED+LDSVMEDA+DEFR+FEEEFDRMAE ELQDLVDKSEKARK+GSLMEKAAAVASKRY
Sbjct: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of CmaCh04G005190 vs. NCBI nr
Match: XP_023533822.1 (uncharacterized protein LOC111795549 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.2 bits (674), Expect = 6.6e-67
Identity = 141/147 (95.92%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAA+ELQHQNE RDAEIAM 
Sbjct: 90  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQ 149

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVMEDA+DEFRRFEEEFDRMAE ELQDLVDKSEKARKMG LMEKAAAVASKRY
Sbjct: 150 QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRY 209

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 210 MEAAMNSATASMRSAWKAISSNKVHPS 236

[Close]

BLAST of CmaCh04G005190 vs. TAIR 10
Match: AT1G60870.1 (maternal effect embryo arrest 9 )

HSP 1 Score: 157.5 bits (397), Expect = 8.1e-39
Identity = 86/147 (58.50%), Postives = 111/147 (75.51%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEALI  FT LSD+AL DK FDPS IEDLM+LFE+++Y +WAALE + Q E  +AE ++ 
Sbjct: 1   MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLR 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           +AE  LD  ME  ++E+RR  EE +RM   EL++L +K+E AR+ G+LMEKAA VA+KR+
Sbjct: 61  EAELELDRDMEWGMEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATVAAKRH 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           + AAM SA ASMRSAWK  + NKVHPS
Sbjct: 121 IAAAMGSAAASMRSAWKTAAGNKVHPS 147

The following BLAST results are available for this feature:

BLAST of CmaCh04G005190 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh04G005190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IXX5	3.1e-70	100.00	uncharacterized protein LOC111481629 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FR93	1.7e-68	97.28	uncharacterized protein LOC111447720 OS=Cucurbita moschata OX=3662 GN=LOC1114477...	[more]
A0A0A0LAB6	3.3e-64	91.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1	[more]
A0A6J1JCA1	8.1e-63	91.16	uncharacterized protein LOC111483158 OS=Cucurbita maxima OX=3661 GN=LOC111483158...	[more]
A0A6J1E4Z9	1.4e-62	91.16	uncharacterized protein LOC111430656 OS=Cucurbita moschata OX=3662 GN=LOC1114306...	[more]

BLAST of CmaCh04G005190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982937.1	6.3e-70	100.00	uncharacterized protein LOC111481629 isoform X1 [Cucurbita maxima] >XP_022982945...	[more]
XP_022942791.1	3.5e-68	97.28	uncharacterized protein LOC111447720 [Cucurbita moschata] >XP_022942792.1 unchar...	[more]
KAG6600354.1	2.3e-67	96.60	hypothetical protein SDJN03_05587, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7031013.1	5.0e-67	95.92	hypothetical protein SDJN02_05052, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023533822.1	6.6e-67	95.92	uncharacterized protein LOC111795549 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh04G005190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60870.1	8.1e-39	58.50	maternal effect embryo arrest 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 70..90
None	No IPR available	PANTHER	PTHR37707	MATERNAL EFFECT EMBRYO ARREST 9	coord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G005190.1	CmaCh04G005190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009555	pollen development
cellular_component	GO:0009506	plasmodesma