CmaCh04G004210 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G004210
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionbasic form of pathogenesis-related protein 1-like
LocationCma_Chr04: 2164327 .. 2166607 (+)
RNA-Seq ExpressionCmaCh04G004210
SyntenyCmaCh04G004210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACTTTCATGTTCCTCCTCACTCTAACCAACGCTCAAAATGCCCCCAGTGACTACCTCGCACTTCACAATAGCATTCGAGCCCAGGTTGGTGTTGGCCCCATGCAATGGAGCAACACCTTGGCCGCGTACGCTCAAGCCTATGCAGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAACCGGACCGTACGGCGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACTGGGGTGGATGCAGTGAAGCTGTGGGCAAAAGAGAAGCCGCTGTATGATTATGCATTGAACAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCAGTGCGACTTGGATGTGCTAGAGTGCCATGTAAGGGTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCGGGCAACTATATTGGGGACAAGCCTTATGGTTCTTCTCTCTAACTAGATTTGATTTTAAAATTTTTATGAATTGTAATAAATGTTGGGAGAGAATCATGAATTTATGAATGAAAATGAAGTTTTGCACGAAATTATCTATCGAAAATTTCCATCTAAAACTACAAAAGTTAATGGAGAATCATTGAATTTTAGGAATCACGAATCTTCAATACACATTAAAAATCTTGGAGAATTACGAGTGTTAGGAGTCACAAATCTACACACTGGCATTTAACTCCGCTGCACTATGAGACCCATAGCGGAGACGAAGGCCCATTGCCGCAACCTACCGACATTTACCGTCTTTGAATATCGAGACCAACGGGGCTGGAGTGACTAAAGGACACCCGACGCTCAAAAGGCGACCATATTTTTTCTTACTCTGTCTATTGGCCACTGCATTCGTCTTTTTCTCCTCTTCTGTTGGCAAGAAAACAACAATAATAATAAATAATAAATAATAAATAATCACAATGGTAAAATCAAAGAAAAGTCTGTTTTTGTTAAATTACTAAAATGCCCTTTTATCGAAATACTGAAATGCCCTTCATTTAATAGAAAACGATCAATTTTCTAGAACCGGGTTCAAATTTTTTTAGCAATATATATATATATATAACATTTTTTAATAGTTAATTTTTATTAAAAAATATAAAACATCTTAATAAATCTAATAATATTTCATAAATAATAATATAATATAATATTCTACCCTAATTAGATATGGTTTTATGCATTTATTTTTTTTGGATCCGTTAAAAGATATGGAATTAATCCTCTAATTTTTTAAAATGGAAAATTTATTTTATTTGAGAAATTATATTGAGTTGGAATTTACAATATAGGTTAGGAATTTATTATTATAAAAATATTTTTTATAATAATTGTAGAGTGAATATAACTCAATAATAATTAAATATAATATTAATCGAGAGGTATGAGATTTTATTTATGGATATGTTTTAAGTTACCGTTATTTTTTAAAAAAGAAAAAAAATACAAAAATTCATAATTGACGTCGTAAATATTTTTAATCTAAAAAATTCTTGTTATATAATAAATCCAATCTAACTCAATTATAATTTTTTTGGGTTAAATCATCATTTACTCAAAACTTTAATTAAAATATTAACCTTATTTATTTATTTTCAAATATTTAATTAAGCAATTCAATTTTAATATATATTTTAAAAAGTTATGGAAGAATAAATAAAAAAAAATTATGAAATTAAATAAAATAATAAATATATACGGTGTAAATACATAAATGGCAAGTAAAAATGTATTTTTTAAGATTGACTATAATTATCGTGGATTAAGCTTCATTAATCCTAAAAAAATTCATAAACTAACTAAATTTAGAAAATTTTCATTTATTTGAACCTAATTCAAACAAAAATCTAGTCGTGAAGCCCTAATGACATAATTAGTTTATAATTCATGGTTTTCCCATCACATTCCATATTAAATTTTCCATCTCTATATAAATCCTTCCCTTATTCTCGATCTTCATCTCATCTCTCATCGGAATTATGTGGACTCAAACCCCTCTGATCATGGCCGCTTTTATTGCCACTTTCATGTCCTCCTTGTCCTAACTAACGCTCAGAACGCCCCCCATGACTACCTCGCACTTCACAACCACGTTCAAGCTCAGGTCGGTGTCGGCCCCATGCAATGGAGCAGCACTGTGGCCGTGTACGCTCAAGCCTGTGCGGAAAAAAGAATGGGTGATTGTGCCATGATTCACTCAATCGGGTCGTACGGAGAAAATATAGCCGCTGGTTCTACCCTGAGTTCACTGGGGTGGATGCAATGA

mRNA sequence

ATGGCCACTTTCATGTTCCTCCTCACTCTAACCAACGCTCAAAATGCCCCCAGTGACTACCTCGCACTTCACAATAGCATTCGAGCCCAGGTTGGTGTTGGCCCCATGCAATGGAGCAACACCTTGGCCGCGTACGCTCAAGCCTATGCAGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAACCGGACCGTACGGCGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACTGGGGTGGATGCAGTGAAGCTGTGGGCAAAAGAGAAGCCGCTGTATGATTATGCATTGAACAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGAACGCCCCCCATGACTACCTCGCACTTCACAACCACGTTCAAGCTCAGGTCGGTGTCGGCCCCATGCAATGGAGCAGCACTGTGGCCGTGTACGCTCAAGCCTGTGCGGAAAAAAGAATGGGTGATTGTGCCATGATTCACTCAATCGGGTCGTACGGAGAAAATATAGCCGCTGGTTCTACCCTGAGTTCACTGGGGTGGATGCAATGA

Coding sequence (CDS)

ATGGCCACTTTCATGTTCCTCCTCACTCTAACCAACGCTCAAAATGCCCCCAGTGACTACCTCGCACTTCACAATAGCATTCGAGCCCAGGTTGGTGTTGGCCCCATGCAATGGAGCAACACCTTGGCCGCGTACGCTCAAGCCTATGCAGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAACCGGACCGTACGGCGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACTGGGGTGGATGCAGTGAAGCTGTGGGCAAAAGAGAAGCCGCTGTATGATTATGCATTGAACAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGAACGCCCCCCATGACTACCTCGCACTTCACAACCACGTTCAAGCTCAGGTCGGTGTCGGCCCCATGCAATGGAGCAGCACTGTGGCCGTGTACGCTCAAGCCTGTGCGGAAAAAAGAATGGGTGATTGTGCCATGATTCACTCAATCGGGTCGTACGGAGAAAATATAGCCGCTGGTTCTACCCTGAGTTCACTGGGGTGGATGCAATGA

Protein sequence

MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQMNAPHDYLALHNHVQAQVGVGPMQWSSTVAVYAQACAEKRMGDCAMIHSIGSYGENIAAGSTLSSLGWMQ
Homology
[Close]
BLAST of CmaCh04G004210 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.2e-34
Identity = 67/110 (60.91%), Postives = 77/110 (70.00%), Query Frame = 0 

Query: 3   TFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMIHS 62
           TF  L+  + AQN+P DYL  HN+ R QVGVGPM W N LAAYAQ YA +R GDC MIHS
Sbjct: 13  TFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHS 72

Query: 63  TGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 113
            GPYGEN+AA  +P+     AVK+W  EK  YDY  N CVGG CGHYTQ+
Sbjct: 73  HGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQV 121

[Close]
BLAST of CmaCh04G004210 vs. ExPASy Swiss-Prot
Match: Q04108 (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-27
Identity = 61/101 (60.40%), Postives = 73/101 (72.28%), Query Frame = 0 

Query: 13  AQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMIHSTGPYGENIAA 72
           AQN+P DYLA+HN  RAQVGVGPM W   LA+ AQ YA  R GDC +IHS    GEN+A 
Sbjct: 24  AQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAK 83

Query: 73  GYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGE-CGHYTQM 113
           G   +FTG  AV+LW  E+P Y+YA N+CVGG+ CGHYTQ+
Sbjct: 84  G-GGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQV 121

[Close]
BLAST of CmaCh04G004210 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-27
Identity = 57/106 (53.77%), Postives = 75/106 (70.75%), Query Frame = 0 

Query: 7   LLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMIHSTGPY 66
           L+  + AQ++P DYL +HN  R  VGVGPMQW   +AAYA++YAE+ +G+C +IHS GPY
Sbjct: 20  LVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPY 79

Query: 67  GENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 113
           GEN+A G   + +GV AV +W  EK  Y+YA N C  G CGHYTQ+
Sbjct: 80  GENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQV 123

[Close]
BLAST of CmaCh04G004210 vs. ExPASy Swiss-Prot
Match: P04284 (Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum OX=4081 GN=PR1B1 PE=1 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 5.0e-27
Identity = 60/101 (59.41%), Postives = 72/101 (71.29%), Query Frame = 0 

Query: 13  AQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMIHSTGPYGENIAA 72
           AQN+P DYLA+HN  RAQVGVGPM W   LA+ AQ YA  R GDC +IHS    GEN+A 
Sbjct: 24  AQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAK 83

Query: 73  GYYPEFTGVDAVKLWAKEKPLYDYALNKCVGG-ECGHYTQM 113
           G   +FTG  AV+LW  E+P Y+YA N+CVGG +C HYTQ+
Sbjct: 84  G-GGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQV 121

[Close]
BLAST of CmaCh04G004210 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.5e-26
Identity = 55/103 (53.40%), Postives = 68/103 (66.02%), Query Frame = 0 

Query: 11  TNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMIHSTGPYGENI 70
           + AQ    ++L  HN+ R +VGVGPM W + LAAYAQ YA +R  DC MIHS GPYGEN+
Sbjct: 19  SQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENL 78

Query: 71  AAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGE-CGHYTQM 113
           AA  +P+     AVK+W  EK  YDY  N C  G+ CGHYTQ+
Sbjct: 79  AAA-FPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQV 120

[Close]
BLAST of CmaCh04G004210 vs. ExPASy TrEMBL
Match: A0A6J1JHT5 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111485854 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 7.9e-60
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMI 60
           MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMI
Sbjct: 11  MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMI 70

Query: 61  HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 113
           HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM
Sbjct: 71  HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 122

[Close]
BLAST of CmaCh04G004210 vs. ExPASy TrEMBL
Match: A0A6J1FTM8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447196 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55
Identity = 103/112 (91.96%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMI 60
           MATFMF L LTNAQNAP DYLALHN +RAQVGVGPMQWSNT+AAYAQAYAEKRKGDCAMI
Sbjct: 13  MATFMFFLALTNAQNAPRDYLALHNRVRAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMI 72

Query: 61  HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 113
           HSTGPYGENIA GYYPEFTG+DAVKLWAKEKPLYDYA NKCVGGECGHYTQM
Sbjct: 73  HSTGPYGENIATGYYPEFTGMDAVKLWAKEKPLYDYASNKCVGGECGHYTQM 124

[Close]
BLAST of CmaCh04G004210 vs. ExPASy TrEMBL
Match: A0A6J1EU05 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436564 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.8e-54
Identity = 101/112 (90.18%), Postives = 104/112 (92.86%), Query Frame = 0 

Query: 1   MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMI 60
           MATF+FLLTLTNAQNAP DY ALHN  RAQVGVGPMQWSNT+AAY QAYAEKRKGDCAMI
Sbjct: 1   MATFIFLLTLTNAQNAPGDYFALHNRARAQVGVGPMQWSNTVAAYTQAYAEKRKGDCAMI 60

Query: 61  HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 113
           HSTGPYGENIAAGYYPEFTG DAVKLWA EKPLYD+A NKCVGGECGHYTQM
Sbjct: 61  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQM 112

[Close]
BLAST of CmaCh04G004210 vs. ExPASy TrEMBL
Match: A0A6J1EQL1 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436565 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 5.0e-54
Identity = 101/112 (90.18%), Postives = 104/112 (92.86%), Query Frame = 0 

Query: 1   MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMI 60
           MATF+FLL LTNAQNAP DYLALHN  RAQVGVGPMQWSNT+A YAQAYAEKRKGDCAMI
Sbjct: 1   MATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAVYAQAYAEKRKGDCAMI 60

Query: 61  HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 113
           HSTGPYGENIAAGYYPEFTG DAVKLWA EKPLYD+A NKCVGGECGHYTQM
Sbjct: 61  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQM 112

[Close]
BLAST of CmaCh04G004210 vs. ExPASy TrEMBL
Match: A0A6J1H6J8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460079 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 5.0e-54
Identity = 101/112 (90.18%), Postives = 104/112 (92.86%), Query Frame = 0 

Query: 1   MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMI 60
           +ATF FLL LTNAQNAPSDYLALHN  RAQVGVGPMQWSNT+A YAQAYAEKRKGDCAMI
Sbjct: 13  IATFTFLLALTNAQNAPSDYLALHNRARAQVGVGPMQWSNTVAVYAQAYAEKRKGDCAMI 72

Query: 61  HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 113
           HSTGPYGENIAAGYYPEFTG DAVKLW  EKPLYD+ALNKCVGGECGHYTQM
Sbjct: 73  HSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHALNKCVGGECGHYTQM 124

[Close]
BLAST of CmaCh04G004210 vs. NCBI nr
Match: XP_022988646.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 240.0 bits (611), Expect = 1.6e-59
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMI 60
           MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMI
Sbjct: 11  MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMI 70

Query: 61  HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 113
           HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM
Sbjct: 71  HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 122

[Close]
BLAST of CmaCh04G004210 vs. NCBI nr
Match: XP_022942003.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 226.1 bits (575), Expect = 2.4e-55
Identity = 103/112 (91.96%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMI 60
           MATFMF L LTNAQNAP DYLALHN +RAQVGVGPMQWSNT+AAYAQAYAEKRKGDCAMI
Sbjct: 13  MATFMFFLALTNAQNAPRDYLALHNRVRAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMI 72

Query: 61  HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 113
           HSTGPYGENIA GYYPEFTG+DAVKLWAKEKPLYDYA NKCVGGECGHYTQM
Sbjct: 73  HSTGPYGENIATGYYPEFTGMDAVKLWAKEKPLYDYASNKCVGGECGHYTQM 124

[Close]
BLAST of CmaCh04G004210 vs. NCBI nr
Match: XP_023542698.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.1 bits (575), Expect = 2.4e-55
Identity = 103/112 (91.96%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 1   MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMI 60
           +ATFMF+L LTNAQNAP DYLALHN +RAQVGVGPMQWSNT+AAYAQ YAEKRKGDCAMI
Sbjct: 13  IATFMFVLALTNAQNAPRDYLALHNRVRAQVGVGPMQWSNTVAAYAQTYAEKRKGDCAMI 72

Query: 61  HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 113
           HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYA NKCVGGECGHYTQM
Sbjct: 73  HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYASNKCVGGECGHYTQM 124

[Close]
BLAST of CmaCh04G004210 vs. NCBI nr
Match: XP_023522017.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 2.7e-54
Identity = 103/112 (91.96%), Postives = 105/112 (93.75%), Query Frame = 0 

Query: 1   MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMI 60
           MATFMFLL LTNAQNAPSDYLALHN  RAQVGV PMQWSNT+AAYAQAYAEKRKGDCAMI
Sbjct: 13  MATFMFLLALTNAQNAPSDYLALHNRARAQVGVDPMQWSNTVAAYAQAYAEKRKGDCAMI 72

Query: 61  HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 113
           HSTGPYGENIAAGYYPEFTG DAVKLWA EKPLYD+A NKCVGGECGHYTQM
Sbjct: 73  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQM 124

[Close]
BLAST of CmaCh04G004210 vs. NCBI nr
Match: XP_023539005.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 2.7e-54
Identity = 102/112 (91.07%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MATFMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMI 60
           +ATFMFLL LTNAQNAP DYLALHN  RA+VGVGPMQWSNT+AAYAQAYAEKRKGDCAMI
Sbjct: 13  IATFMFLLVLTNAQNAPRDYLALHNRARAKVGVGPMQWSNTVAAYAQAYAEKRKGDCAMI 72

Query: 61  HSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 113
           HSTGPYGENIAAGYYPEFTG DAVKLWA EKPLYD+ALNKCVGGECGHYTQM
Sbjct: 73  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHALNKCVGGECGHYTQM 124

[Close]
BLAST of CmaCh04G004210 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 4.0e-32
Identity = 62/108 (57.41%), Postives = 73/108 (67.59%), Query Frame = 0 

Query: 6   FLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMIHSTGP 65
           FL+  TNAQN P DYL  HN+ RAQVGV  + W  TLAAYA  Y+  RK DC ++HS GP
Sbjct: 16  FLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGP 75

Query: 66  YGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGG-ECGHYTQM 113
           YGEN+A G    F+ + AVKLW  EKP Y YA N C GG +C HYTQ+
Sbjct: 76  YGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQV 123

[Close]
BLAST of CmaCh04G004210 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 124.8 bits (312), Expect = 7.1e-29
Identity = 57/106 (53.77%), Postives = 75/106 (70.75%), Query Frame = 0 

Query: 7   LLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMIHSTGPY 66
           L+  + AQ++P DYL +HN  R  VGVGPMQW   +AAYA++YAE+ +G+C +IHS GPY
Sbjct: 20  LVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPY 79

Query: 67  GENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 113
           GEN+A G   + +GV AV +W  EK  Y+YA N C  G CGHYTQ+
Sbjct: 80  GENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQV 123

[Close]
BLAST of CmaCh04G004210 vs. TAIR 10
Match: AT1G50050.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 7.9e-28
Identity = 60/109 (55.05%), Postives = 71/109 (65.14%), Query Frame = 0 

Query: 6   FLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMIHST-G 65
           FL+  TNAQNA  DYL  HN+ RAQVGV  + W   +AAYA  YA  RK DC++  ST G
Sbjct: 16  FLVLATNAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNYANARKVDCSLTPSTGG 75

Query: 66  PYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGG-ECGHYTQM 113
            YGEN+A G    FTGV AV LW  EKP Y+Y  N C+G  +C HYTQ+
Sbjct: 76  SYGENLANGNNALFTGVAAVNLWVNEKPYYNYTANACIGAQQCKHYTQV 124

[Close]
BLAST of CmaCh04G004210 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-27
Identity = 58/110 (52.73%), Postives = 75/110 (68.18%), Query Frame = 0 

Query: 4   FMFLLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMIHST 63
           F+ L+    AQ++P D+LA+HN  RA+VGVGP++W   +AAYA+ YA +RKGDCAM HS+
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 64  GPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCV-GGECGHYTQM 113
           G YGENIA       TGV AV +W  E+  YDY  N C    +CGHYTQ+
Sbjct: 77  GSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQV 125

[Close]
BLAST of CmaCh04G004210 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 117.9 bits (294), Expect = 8.7e-27
Identity = 55/106 (51.89%), Postives = 70/106 (66.04%), Query Frame = 0 

Query: 7   LLTLTNAQNAPSDYLALHNSIRAQVGVGPMQWSNTLAAYAQAYAEKRKGDCAMIHSTGPY 66
           L+    AQ++  DY+  HN  R+Q+GVGPMQW   LAAYA+ YA + KGDC ++HS GPY
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 67  GENIAAGYYPEFTGVDAVKLWAKEKPLYDYALNKCVGGECGHYTQM 113
           GEN+A     + +GV AV LW  EK  Y+Y  N C  G CGHYTQ+
Sbjct: 80  GENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQV 123

The following BLAST results are available for this feature:
BLAST of CmaCh04G004210 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P116703.2e-3460.91Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S... [more]
Q041081.0e-2760.40Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
P331541.0e-2753.77Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1... [more]
P042845.0e-2759.41Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum OX=4081 GN=PR1B1 PE=... [more]
Q086975.5e-2653.40Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
BLAST of CmaCh04G004210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JHT57.9e-60100.00basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1FTM81.2e-5591.96basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1EU053.8e-5490.18basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1EQL15.0e-5490.18basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1H6J85.0e-5490.18basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ... [more]
BLAST of CmaCh04G004210 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022988646.11.6e-59100.00basic form of pathogenesis-related protein 1-like [Cucurbita maxima][more]
XP_022942003.12.4e-5591.96basic form of pathogenesis-related protein 1-like [Cucurbita moschata][more]
XP_023542698.12.4e-5591.96basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo][more]
XP_023522017.12.7e-5491.96basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo][more]
XP_023539005.12.7e-5491.07basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo][more]
BLAST of CmaCh04G004210 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G50060.14.0e-3257.41CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT2G14610.17.1e-2953.77pathogenesis-related gene 1 [more]
AT1G50050.17.9e-2855.05CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT4G33720.11.8e-2752.73CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT2G14580.18.7e-2751.89basic pathogenesis-related protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014044CAP domainSMARTSM00198SCP_3coord: 15..126
e-value: 4.7E-24
score: 95.9
IPR014044CAP domainPFAMPF00188CAPcoord: 21..112
e-value: 5.8E-14
score: 53.0
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 116..180
e-value: 2.1E-9
score: 39.8
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 10..115
e-value: 5.5E-25
score: 90.2
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 15..114
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 116..173
IPR001283Cysteine-rich secretory protein-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 114..174
IPR001283Cysteine-rich secretory protein-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 11..112
NoneNo IPR availablePANTHERPTHR10334:SF488PATHOGENESIS-RELATED PROTEIN 1coord: 114..174
NoneNo IPR availablePANTHERPTHR10334:SF488PATHOGENESIS-RELATED PROTEIN 1coord: 11..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G004210.1CmaCh04G004210.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009607 response to biotic stimulus
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane