CmaCh04G002170 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G002170
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	CASP-like protein
Location	Cma_Chr04: 1052628 .. 1054863 (-)
RNA-Seq Expression	CmaCh04G002170
Synteny	CmaCh04G002170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAGACAATTCACAGTGGTATGATATTGTCTACTTTGAGTATAAGCTCTCATAGCTTTGCTTTGAGTTTTCCCAAAAGGCATCATCAGTATTTATTGATTATAAATTCATGATCATTCCCTAAATTAGCCGACGTGGGATTTCATCCAACACTTCTTATAGCCTTATCCCTTTTATTCTTCTTCTCTTAGAATCGTCTTTGTAGGTCGGAACGTAGCATTCATGATGATTCATGGAAGGGAACTTCTTCACAAAATTAGAAAGCCTTAATAGCATAAATGGTAGTAATGTTATGAGAGGTTGATAATCGAGTACAGAACCTAGCATGTTGAGACGGGCGCAGGACTAGAGAGCAAGAAAAACTCATTTTTTTGGTTGGGATAAATAAAAGCTTCCTCGATTTTTTGTGAAATTATTCTGTTTTAACTTGAGTTAAATTTTATTAGGAAAAAGTAGCCTCAACCAAGGGCATTTGGTCTAGTGGTATGATTGTCGCTTAGGGTGCGAGAGGTCCCGAGTTCAATTCTCGGAATGCCCCTAATTTTTTTTTACTTTTCGAAGATTTTTATTTTATTGTTTAAATAAAAGCACGTTTCATATTTATATTTGTTTTTCGAAAGAAGCGCTTTGGGCATTACTATTTATAACGGTCCGGCTTACCAAACACGACCGATACAATGTCAATTTTCGTGGGCCCTTGTGGGCTTCCGGTTTTTTCATCTTTATGAAATATACTAAACTGGAAAAATTTTAAAATATGGAAATGTGGGAGTTTAAAATTCAGCCACTTTCAAATTTATTTTTGAATTTTAAAACTTTTAGGTAAAATCACGAATTTTAAAGAATATTTATTTCTACTTCGATCATCATATCCTTACTTTATTTAAATTATTCAATCATTATTTATTACATCATAATAATTTTAGGCATTATTTATTTGTGTTTTTATTGCGGTTTACCAATGTTTCAACCATTATTCAAAATAATGTGAGAGAAATGATAAAATTTTGAAAGCAAATTTCTGTCACTTTCCACTACTACTACTCAGAGCCGTCTGCTACTCTCTCTCTCTCTCTCTCTCCATTTCTCACGTGGCCGCTTTGAACAATTTCCCCACAGATTTCCCACCCATTTTCCCTCAAATCCCTCTCTCATGGAACTCTTGCCCTTCTCCGTCACTCCTCCACCGCCGCTCTGAATCGTTTGCTTTCTGTCTTTCACCATAAGGGCGGAAAGGAAGAGCTAATCGAACAGACTTCCCTGATATTGGTCTGTTCGTTGATTTATTTTCGTCCCCATTTTATGTATGCACTTCTCTTCCTGTAGCTCTTGGCGACTGGAACGGCGGCGGCGGCGGCGGCGGCTATGCGATCCCCTCAGTCCCTCCGCAACGGCGGAACGTCATCGCCTCATGCTCGAATGCCTACTCCTCACCACCACCACCACTTCCACTCCACTGTCTCTGTTCAGAAACTCAAGCGCTTCAACTCTCTCATCCTCGTTTTCCGTCTATCTACCTTCTGCTTCTCCCTCGCCTCCGCTGTCTTCATGATTACTAACTCTCGCGGCTCTGGATCCGATTCCCCTCGCTGGTACGATTTCGACGCCTTCAGGTATGCCTCTCTTTCTTCTCCGATTATCGCGTCTACCTTGTTTCTGTTTCGCTTTGGTTCATGAGAAAATTTAGGTTATAACGAATGGACTATTTGGCTCGTTCATCTTCGTTCTCCTGTAAATTAAACGCGGATTGAATTCGTTAAAATGAACTCTAACAACGATTGAGAATCTTCAACCAGGTACGTTTTCGCGGCGAACGCCATAGTCGCAGTGTACTCACTGTTTGAAATGATCGCTTCCGTGTGGGAAATCTCGAGAGAAGTGACTCTCTTCCCTGAGATTTTACAAGTCTGGTTCGACTTTGGCCATGACCAGGTAAAAACCCTAACCCCTTCCTCCTCTTTCTCTTCCTCTCTCTTCTGGTCTAATCGGAATTAGGGCTCTGATTCCATAGGCGTTTGCATACCTCCTCCTCTCTGCGGATTCCGCAGGGACGGCTCTCGCGATAACTCTGAGGGGAACCGACACGTGTAGGGTGACGACCGCATTTTGCGTTCAATCAACTATCTCGATTGCACTGGGATTCGCCGGTTTCCTGTTTCTCGGGTTATCTACGCTGCTTTCGGGTTTTCGGGTCGTCTGTTTCGTAATCAACGGCTCTCGTTTTCATTTCTAA

mRNA sequence

ATGAAAAGACAATTCACAGTGATTTCCCACCCATTTTCCCTCAAATCCCTCTCTCATGGAACTCTTGCCCTTCTCCGTCACTCCTCCACCGCCGCTCTGAATCGTTTGCTTTCTGTCTTTCACCATAAGGGCGGAAAGGAAGAGCTAATCGAACAGACTTCCCTGATATTGCTCTTGGCGACTGGAACGGCGGCGGCGGCGGCGGCGGCTATGCGATCCCCTCAGTCCCTCCGCAACGGCGGAACGTCATCGCCTCATGCTCGAATGCCTACTCCTCACCACCACCACCACTTCCACTCCACTGTCTCTGTTCAGAAACTCAAGCGCTTCAACTCTCTCATCCTCGTTTTCCGTCTATCTACCTTCTGCTTCTCCCTCGCCTCCGCTGTCTTCATGATTACTAACTCTCGCGGCTCTGGATCCGATTCCCCTCGCTGGTACGATTTCGACGCCTTCAGGTACGTTTTCGCGGCGAACGCCATAGTCGCAGTGTACTCACTGTTTGAAATGATCGCTTCCGTGTGGGAAATCTCGAGAGAAGTGACTCTCTTCCCTGAGATTTTACAAGTCTGGTTCGACTTTGGCCATGACCAGGCGTTTGCATACCTCCTCCTCTCTGCGGATTCCGCAGGGACGGCTCTCGCGATAACTCTGAGGGGAACCGACACGTGTAGGGTGACGACCGCATTTTGCGTTCAATCAACTATCTCGATTGCACTGGGATTCGCCGGTTTCCTGTTTCTCGGGTTATCTACGCTGCTTTCGGGTTTTCGGGTCGTCTGTTTCGTAATCAACGGCTCTCGTTTTCATTTCTAA

Coding sequence (CDS)

ATGAAAAGACAATTCACAGTGATTTCCCACCCATTTTCCCTCAAATCCCTCTCTCATGGAACTCTTGCCCTTCTCCGTCACTCCTCCACCGCCGCTCTGAATCGTTTGCTTTCTGTCTTTCACCATAAGGGCGGAAAGGAAGAGCTAATCGAACAGACTTCCCTGATATTGCTCTTGGCGACTGGAACGGCGGCGGCGGCGGCGGCGGCTATGCGATCCCCTCAGTCCCTCCGCAACGGCGGAACGTCATCGCCTCATGCTCGAATGCCTACTCCTCACCACCACCACCACTTCCACTCCACTGTCTCTGTTCAGAAACTCAAGCGCTTCAACTCTCTCATCCTCGTTTTCCGTCTATCTACCTTCTGCTTCTCCCTCGCCTCCGCTGTCTTCATGATTACTAACTCTCGCGGCTCTGGATCCGATTCCCCTCGCTGGTACGATTTCGACGCCTTCAGGTACGTTTTCGCGGCGAACGCCATAGTCGCAGTGTACTCACTGTTTGAAATGATCGCTTCCGTGTGGGAAATCTCGAGAGAAGTGACTCTCTTCCCTGAGATTTTACAAGTCTGGTTCGACTTTGGCCATGACCAGGCGTTTGCATACCTCCTCCTCTCTGCGGATTCCGCAGGGACGGCTCTCGCGATAACTCTGAGGGGAACCGACACGTGTAGGGTGACGACCGCATTTTGCGTTCAATCAACTATCTCGATTGCACTGGGATTCGCCGGTTTCCTGTTTCTCGGGTTATCTACGCTGCTTTCGGGTTTTCGGGTCGTCTGTTTCGTAATCAACGGCTCTCGTTTTCATTTCTAA

Protein sequence

MKRQFTVISHPFSLKSLSHGTLALLRHSSTAALNRLLSVFHHKGGKEELIEQTSLILLLATGTAAAAAAAMRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGLSTLLSGFRVVCFVINGSRFHF

Homology

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BLAST of CmaCh04G002170 vs. ExPASy Swiss-Prot
Match: B9SR15 (CASP-like protein 4C1 OS=Ricinus communis OX=3988 GN=RCOM_0464280 PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.6e-77
Identity = 159/203 (78.33%), Postives = 169/203 (83.25%), Query Frame = 0


Query: 71  MRSPQSLRNGGTSSPH---ARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLA 130
           MRSPQSLRNG T SP     R PTP    HFHSTVS+QKLKRFN LILVFRLSTFCFSLA
Sbjct: 1   MRSPQSLRNGETPSPSPRPPRFPTP----HFHSTVSLQKLKRFNLLILVFRLSTFCFSLA 60

Query: 131 SAVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEI 190
           S+VFM+TN        P WY FDAFRYVFAANAIVA+YSLFEM ASVWEISR  TLFPEI
Sbjct: 61  SSVFMLTN--------PTWYHFDAFRYVFAANAIVAIYSLFEMAASVWEISRGNTLFPEI 120

Query: 191 LQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLF 250
           LQVWFDFGHDQ FAYLLLSADSA TALA TL+G DTC  + AFCVQS I+IALGFAGFLF
Sbjct: 121 LQVWFDFGHDQVFAYLLLSADSAATALAKTLKGGDTCAASNAFCVQSYIAIALGFAGFLF 180

Query: 251 LGLSTLLSGFRVVCFVINGSRFH 271
           LGLS+LLSGFRVVCF+INGSRF+
Sbjct: 181 LGLSSLLSGFRVVCFLINGSRFY 191

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BLAST of CmaCh04G002170 vs. ExPASy Swiss-Prot
Match: B9HTK2 (CASP-like protein 4C2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_822486 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.2e-71
Identity = 147/200 (73.50%), Postives = 161/200 (80.50%), Query Frame = 0


Query: 71  MRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 130
           MRSPQ  R+GG +             HF STVSVQKLKRFNSLILVFR + FCFSLASAV
Sbjct: 1   MRSPQPHRSGGDT-----------QQHFQSTVSVQKLKRFNSLILVFRFAAFCFSLASAV 60

Query: 131 FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 190
           FM+TNSR  GSDS  WY+FDAFRYVFAANAIVA+YSLFEM ASVWEISR  TLFPEI QV
Sbjct: 61  FMLTNSR--GSDSLHWYNFDAFRYVFAANAIVAIYSLFEMAASVWEISRNATLFPEICQV 120

Query: 191 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL 250
           WFDFGHDQ FAYLLLSA++AGT LA TL+  DTC    AFCVQS I+I LGFAGFLFLG+
Sbjct: 121 WFDFGHDQVFAYLLLSANTAGTELARTLK--DTCTDNKAFCVQSDIAIVLGFAGFLFLGI 180

Query: 251 STLLSGFRVVCFVINGSRFH 271
           S+L SGFRVVCF+INGSRF+
Sbjct: 181 SSLFSGFRVVCFIINGSRFY 185

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BLAST of CmaCh04G002170 vs. ExPASy Swiss-Prot
Match: B9HMF8 (CASP-like protein 4C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820327 PE=3 SV=2)

HSP 1 Score: 265.0 bits (676), Expect = 9.3e-70
Identity = 142/200 (71.00%), Postives = 158/200 (79.00%), Query Frame = 0


Query: 71  MRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 130
           MR PQ  RNGG +             HFHST+S+QKLKRFNSLILVFR S FCFSLASAV
Sbjct: 1   MRFPQPHRNGGET-----------QQHFHSTISLQKLKRFNSLILVFRFSAFCFSLASAV 60

Query: 131 FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 190
           FM+TNSR  GSDS  WY+FDAFRYVFAANAIVAVYSLFEM A+VWEISR  TLFPE+ QV
Sbjct: 61  FMLTNSR--GSDSFHWYNFDAFRYVFAANAIVAVYSLFEMTAAVWEISRNATLFPEVCQV 120

Query: 191 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL 250
           WFDFGHDQ FAYLLLSA+S GT +A T++  D C     FCVQS I+IALGF GFLFLG+
Sbjct: 121 WFDFGHDQVFAYLLLSANSTGTEMARTMK--DACTDNKPFCVQSDIAIALGFVGFLFLGV 180

Query: 251 STLLSGFRVVCFVINGSRFH 271
           S+L SGFRVVCF+INGSRF+
Sbjct: 181 SSLFSGFRVVCFIINGSRFY 185

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BLAST of CmaCh04G002170 vs. ExPASy Swiss-Prot
Match: Q9M2U0 (CASP-like protein 4C1 OS=Arabidopsis thaliana OX=3702 GN=At3g55390 PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.1e-66
Identity = 133/200 (66.50%), Postives = 151/200 (75.50%), Query Frame = 0


Query: 71  MRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 130
           MRSP + RNG         PT   H HFHSTV+ QKL+RFNSLIL+ RL++F FSLASAV
Sbjct: 1   MRSPHAFRNG-------ESPTLRDHTHFHSTVTAQKLRRFNSLILLLRLASFSFSLASAV 60

Query: 131 FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 190
           FM+TNSRGS   SP WYDFDAFR+VF ANAIVA+YS+FEM   VWE SRE TL+PE  QV
Sbjct: 61  FMLTNSRGSA--SPHWYDFDAFRFVFVANAIVALYSVFEMGTCVWEFSRETTLWPEAFQV 120

Query: 191 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL 250
           WFDFGHDQ F+YLLLSA SA  ALA T+RG DTC    AFC+QS ++I LGFA FLFL  
Sbjct: 121 WFDFGHDQVFSYLLLSAGSAAAALARTMRGGDTCTANKAFCLQSDVAIGLGFAAFLFLAF 180

Query: 251 STLLSGFRVVCFVINGSRFH 271
           S+  SGFRV CF+I GSRFH
Sbjct: 181 SSCFSGFRVACFLITGSRFH 191

[Close]

BLAST of CmaCh04G002170 vs. ExPASy Swiss-Prot
Match: A9T836 (CASP-like protein 4C3 OS=Physcomitrium patens OX=3218 GN=PHYPADRAFT_192523 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.4e-33
Identity = 81/171 (47.37%), Postives = 102/171 (59.65%), Query Frame = 0


Query: 97  HFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAVFMITN-SRGSGSDSPRWYDFDAFRYV 156
           H++   + QK +R N +IL+FR  TF FSL S + M TN  R        WYDFD FRYV
Sbjct: 15  HYYGKSTAQKHRRSNGIILIFRALTFSFSLTSVIVMGTNRHRIDAQSRVAWYDFDPFRYV 74

Query: 157 FAANAIVAVYSLFEMIASVWEISREVTLFPEILQVWFDFGHDQAFAYLLLSADSAGTALA 216
            A NAI+ +YS  E+  +V+   ++    PE  QVWFD+GHDQ FAYLL SA+SAG A+A
Sbjct: 75  LAVNAIICIYSFVEIWLAVYTYLKDTLFLPETFQVWFDYGHDQGFAYLLFSANSAGIAMA 134

Query: 217 ITLR-------GTDTCRVTTAFCVQSTISIALGFAGFLFLGLSTLLSGFRV 260
             L+       G   C     FC Q+  SI LGF  FLFL LS+LL+G RV
Sbjct: 135 QLLQSGNSLIHGAYRCSDAGVFCTQARASIGLGFGAFLFLALSSLLTGLRV 185

[Close]

BLAST of CmaCh04G002170 vs. ExPASy TrEMBL
Match: A0A6J1JHP8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111485192 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.9e-106
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 71  MRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 130
           MRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV
Sbjct: 1   MRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 60

Query: 131 FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 190
           FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV
Sbjct: 61  FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 120

Query: 191 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL 250
           WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL
Sbjct: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL 180

Query: 251 STLLSGFRVVCFVINGSRFHF 272
           STLLSGFRVVCFVINGSRFHF
Sbjct: 181 STLLSGFRVVCFVINGSRFHF 201

[Close]

BLAST of CmaCh04G002170 vs. ExPASy TrEMBL
Match: A0A6J1FUB8 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111447351 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.4e-105
Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 71  MRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 130
           MRSPQSLRNGG SSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV
Sbjct: 1   MRSPQSLRNGGMSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 60

Query: 131 FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 190
           FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV
Sbjct: 61  FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 120

Query: 191 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL 250
           WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL
Sbjct: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL 180

Query: 251 STLLSGFRVVCFVINGSRFHF 272
           STLLSGFRVVCFVINGSRFHF
Sbjct: 181 STLLSGFRVVCFVINGSRFHF 201

[Close]

BLAST of CmaCh04G002170 vs. ExPASy TrEMBL
Match: A0A0A0KNW2 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G182050 PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 2.2e-98
Identity = 193/206 (93.69%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 71  MRSPQSLRN-----GGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFS 130
           MRSPQSLRN     GGT SPHAR+PTP  HHHFHSTVSVQKLKRFNSLILVFRLSTFCFS
Sbjct: 1   MRSPQSLRNGGVGGGGTPSPHARIPTP--HHHFHSTVSVQKLKRFNSLILVFRLSTFCFS 60

Query: 131 LASAVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFP 190
           LASAVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFP
Sbjct: 61  LASAVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFP 120

Query: 191 EILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGF 250
           EILQVWFDFGHDQAFAYLLLSADSAGTALAITL+GTDTC+VT+AFCVQSTISIALGFAGF
Sbjct: 121 EILQVWFDFGHDQAFAYLLLSADSAGTALAITLKGTDTCKVTSAFCVQSTISIALGFAGF 180

Query: 251 LFLGLSTLLSGFRVVCFVINGSRFHF 272
           LFLGLS+LLSGFRVVCFVINGSRFHF
Sbjct: 181 LFLGLSSLLSGFRVVCFVINGSRFHF 204

[Close]

BLAST of CmaCh04G002170 vs. ExPASy TrEMBL
Match: A0A6J1JST8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111488036 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.9e-98
Identity = 190/200 (95.00%), Postives = 194/200 (97.00%), Query Frame = 0


Query: 71  MRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 130
           MRSPQSLRNGGT SPHAR+PTP  HHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV
Sbjct: 1   MRSPQSLRNGGTPSPHARIPTP--HHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 60

Query: 131 FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 190
           FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVT+FPEILQV
Sbjct: 61  FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTIFPEILQV 120

Query: 191 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL 250
           WFDFGHDQAFAYLLLSA SAGTAL ITLRGTDTCR T+AFCVQSTISIALGFAGFLFLGL
Sbjct: 121 WFDFGHDQAFAYLLLSAGSAGTALLITLRGTDTCRATSAFCVQSTISIALGFAGFLFLGL 180

Query: 251 STLLSGFRVVCFVINGSRFH 271
           S+LLSGFRVVCFVINGSRFH
Sbjct: 181 SSLLSGFRVVCFVINGSRFH 198

[Close]

BLAST of CmaCh04G002170 vs. ExPASy TrEMBL
Match: A0A5D3BVM1 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00170 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.9e-97
Identity = 192/209 (91.87%), Postives = 197/209 (94.26%), Query Frame = 0


Query: 71  MRSPQSLRN--------GGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTF 130
           MRSP SLRN        GGT SPHAR+PTP  HHHFHSTVSVQKLKRFNSLILVFRLSTF
Sbjct: 1   MRSPHSLRNGGGGGGGGGGTPSPHARIPTP--HHHFHSTVSVQKLKRFNSLILVFRLSTF 60

Query: 131 CFSLASAVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVT 190
           CFSLASAVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVT
Sbjct: 61  CFSLASAVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVT 120

Query: 191 LFPEILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGF 250
           LFPEILQVWFDFGHDQAFAYLLLSADSAGTALAITL+GTDTC+VT+AFCVQSTISIALGF
Sbjct: 121 LFPEILQVWFDFGHDQAFAYLLLSADSAGTALAITLKGTDTCKVTSAFCVQSTISIALGF 180

Query: 251 AGFLFLGLSTLLSGFRVVCFVINGSRFHF 272
           AGFLFLGLS+LLSGFRVVCFVINGSRFHF
Sbjct: 181 AGFLFLGLSSLLSGFRVVCFVINGSRFHF 207

[Close]

BLAST of CmaCh04G002170 vs. NCBI nr
Match: XP_022987730.1 (CASP-like protein 4C1 [Cucurbita maxima])

HSP 1 Score: 394.0 bits (1011), Expect = 1.0e-105
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 71  MRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 130
           MRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV
Sbjct: 1   MRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 60

Query: 131 FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 190
           FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV
Sbjct: 61  FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 120

Query: 191 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL 250
           WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL
Sbjct: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL 180

Query: 251 STLLSGFRVVCFVINGSRFHF 272
           STLLSGFRVVCFVINGSRFHF
Sbjct: 181 STLLSGFRVVCFVINGSRFHF 201

[Close]

BLAST of CmaCh04G002170 vs. NCBI nr
Match: XP_022942248.1 (CASP-like protein 4C1 [Cucurbita moschata] >XP_023547993.1 CASP-like protein 4C1 [Cucurbita pepo subsp. pepo] >KAG7030724.1 CASP-like protein 4C2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 391.7 bits (1005), Expect = 5.0e-105
Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 71  MRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 130
           MRSPQSLRNGG SSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV
Sbjct: 1   MRSPQSLRNGGMSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 60

Query: 131 FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 190
           FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV
Sbjct: 61  FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 120

Query: 191 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL 250
           WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL
Sbjct: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL 180

Query: 251 STLLSGFRVVCFVINGSRFHF 272
           STLLSGFRVVCFVINGSRFHF
Sbjct: 181 STLLSGFRVVCFVINGSRFHF 201

[Close]

BLAST of CmaCh04G002170 vs. NCBI nr
Match: KAG6600052.1 (CASP-like protein 4C2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372.1 bits (954), Expect = 4.1e-99
Identity = 198/203 (97.54%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 54  SLILLLATG-TAAAAAAAMRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNS 113
           +L LLLATG  AAAAAAAMRSPQSLRNGG SSPHARMPTPHHHHHFHSTVSVQKLKRFNS
Sbjct: 10  ALKLLLATGPAAAAAAAAMRSPQSLRNGGMSSPHARMPTPHHHHHFHSTVSVQKLKRFNS 69

Query: 114 LILVFRLSTFCFSLASAVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIA 173
           LILVFRLSTFCFSLASAVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIA
Sbjct: 70  LILVFRLSTFCFSLASAVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIA 129

Query: 174 SVWEISREVTLFPEILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCV 233
           SVWEISREVTLFPEILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCV
Sbjct: 130 SVWEISREVTLFPEILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCV 189

Query: 234 QSTISIALGFAGFLFLGLSTLLS 256
           QSTISIALGFAGFLFLGLSTLLS
Sbjct: 190 QSTISIALGFAGFLFLGLSTLLS 212

[Close]

BLAST of CmaCh04G002170 vs. NCBI nr
Match: XP_004147690.1 (CASP-like protein 4C1 [Cucumis sativus] >KGN50549.1 hypothetical protein Csa_021394 [Cucumis sativus])

HSP 1 Score: 368.6 bits (945), Expect = 4.6e-98
Identity = 193/206 (93.69%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 71  MRSPQSLRN-----GGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFS 130
           MRSPQSLRN     GGT SPHAR+PTP  HHHFHSTVSVQKLKRFNSLILVFRLSTFCFS
Sbjct: 1   MRSPQSLRNGGVGGGGTPSPHARIPTP--HHHFHSTVSVQKLKRFNSLILVFRLSTFCFS 60

Query: 131 LASAVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFP 190
           LASAVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFP
Sbjct: 61  LASAVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFP 120

Query: 191 EILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGF 250
           EILQVWFDFGHDQAFAYLLLSADSAGTALAITL+GTDTC+VT+AFCVQSTISIALGFAGF
Sbjct: 121 EILQVWFDFGHDQAFAYLLLSADSAGTALAITLKGTDTCKVTSAFCVQSTISIALGFAGF 180

Query: 251 LFLGLSTLLSGFRVVCFVINGSRFHF 272
           LFLGLS+LLSGFRVVCFVINGSRFHF
Sbjct: 181 LFLGLSSLLSGFRVVCFVINGSRFHF 204

[Close]

BLAST of CmaCh04G002170 vs. NCBI nr
Match: XP_022991395.1 (CASP-like protein 4C1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 368.2 bits (944), Expect = 5.9e-98
Identity = 190/200 (95.00%), Postives = 194/200 (97.00%), Query Frame = 0


Query: 71  MRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 130
           MRSPQSLRNGGT SPHAR+PTP  HHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV
Sbjct: 1   MRSPQSLRNGGTPSPHARIPTP--HHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 60

Query: 131 FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 190
           FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVT+FPEILQV
Sbjct: 61  FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTIFPEILQV 120

Query: 191 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL 250
           WFDFGHDQAFAYLLLSA SAGTAL ITLRGTDTCR T+AFCVQSTISIALGFAGFLFLGL
Sbjct: 121 WFDFGHDQAFAYLLLSAGSAGTALLITLRGTDTCRATSAFCVQSTISIALGFAGFLFLGL 180

Query: 251 STLLSGFRVVCFVINGSRFH 271
           S+LLSGFRVVCFVINGSRFH
Sbjct: 181 SSLLSGFRVVCFVINGSRFH 198

[Close]

BLAST of CmaCh04G002170 vs. TAIR 10
Match: AT3G55390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 253.8 bits (647), Expect = 1.5e-67
Identity = 133/200 (66.50%), Postives = 151/200 (75.50%), Query Frame = 0


Query: 71  MRSPQSLRNGGTSSPHARMPTPHHHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAV 130
           MRSP + RNG         PT   H HFHSTV+ QKL+RFNSLIL+ RL++F FSLASAV
Sbjct: 1   MRSPHAFRNG-------ESPTLRDHTHFHSTVTAQKLRRFNSLILLLRLASFSFSLASAV 60

Query: 131 FMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 190
           FM+TNSRGS   SP WYDFDAFR+VF ANAIVA+YS+FEM   VWE SRE TL+PE  QV
Sbjct: 61  FMLTNSRGSA--SPHWYDFDAFRFVFVANAIVALYSVFEMGTCVWEFSRETTLWPEAFQV 120

Query: 191 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGL 250
           WFDFGHDQ F+YLLLSA SA  ALA T+RG DTC    AFC+QS ++I LGFA FLFL  
Sbjct: 121 WFDFGHDQVFSYLLLSAGSAAAALARTMRGGDTCTANKAFCLQSDVAIGLGFAAFLFLAF 180

Query: 251 STLLSGFRVVCFVINGSRFH 271
           S+  SGFRV CF+I GSRFH
Sbjct: 181 SSCFSGFRVACFLITGSRFH 191

[Close]

BLAST of CmaCh04G002170 vs. TAIR 10
Match: AT1G79780.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 57.4 bits (137), Expect = 2.1e-08
Identity = 37/120 (30.83%), Postives = 59/120 (49.17%), Query Frame = 0


Query: 143 SPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQVWFDFGHDQAFAY 202
           S  W    +++YV  A A   +YSL ++   V+ +     + P   Q W  F  DQ F Y
Sbjct: 61  SSNWSFSPSYQYVVGACAGTVLYSLLQLCLGVYRLVTGSPITPSRFQAWLCFTSDQLFCY 120

Query: 203 LLLSADSAGTALA----ITLRGT---DTCRVTTAFCVQSTISIALGFAGFLFLGLSTLLS 256
           L++SA SAG+ +       +R T   D C+  ++FC    +S+ L F  F+FL  S+  +
Sbjct: 121 LMMSAGSAGSGVTNLNKTGIRHTPLPDFCKTLSSFCNHVALSLLLVFLSFIFLASSSFFT 180

[Close]

BLAST of CmaCh04G002170 vs. TAIR 10
Match: AT2G36330.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 49.7 bits (117), Expect = 4.4e-06
Identity = 43/149 (28.86%), Postives = 71/149 (47.65%), Query Frame = 0


Query: 115 LVFRLSTFCFSLAS-AVFMITNSRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIAS 174
           L FRLS    +L S ++     ++G   DS  +  +  +R+  + N +  VYS F+    
Sbjct: 137 LGFRLSEVVLALISFSIMAADKTKGWSGDS--FDRYKEYRFCLSVNVVAFVYSSFQACDL 196

Query: 175 VWEISREVTLFPEILQVWFDFGHDQAFAYLLLSADSAGTALA---ITLRGTDTCRVTTAF 234
            + + +E  L    L+  F+F  DQ  AYLL+SA +A        ++  G D       F
Sbjct: 197 AYHLVKEKHLISHHLRPLFEFIIDQVLAYLLMSASTAAVTRVDDWVSNWGKD------EF 256

Query: 235 CVQSTISIALGFAGFLFLGLSTLLSGFRV 260
              ++ SIA+ F  FL    S+L+SG+ +
Sbjct: 257 TEMASASIAMSFLAFLAFAFSSLISGYNL 277

[Close]

BLAST of CmaCh04G002170 vs. TAIR 10
Match: AT5G40300.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 49.3 bits (116), Expect = 5.7e-06
Identity = 49/164 (29.88%), Postives = 78/164 (47.56%), Query Frame = 0


Query: 98  FHSTVSVQKLKRFNSLI----LVFRLSTFCFSLASAVFMITNSRGSGSDSPRWYDFDAFR 157
           F S+ S  +  ++ SLI    L FR+  F   L S   M+++ R  G     +Y++  FR
Sbjct: 103 FSSSSSTPRESKWASLIRKALLGFRVIAFVSCLVSFSVMVSD-RDKGWAHDSFYNYKEFR 162

Query: 158 YVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQVWFDFGHDQAFAYLLLSADSAGTA 217
           +  AAN I  VYS F +   V+ +S  +      L+ + +FG DQ  AYLL    SA T+
Sbjct: 163 FCLAANVIGFVYSGFMICDLVYLLSTSIRRSRHNLRHFLEFGLDQMLAYLLA---SASTS 222

Query: 218 LAITLRGTDTCRVTTAFCVQSTISIALGFAGFLFLGLSTLLSGF 258
            +I +    +      F   +  S+AL +  F+     +L SG+
Sbjct: 223 ASIRVDDWQSNWGADKFPDLARASVALSYVSFVAFAFCSLASGY 262

[Close]

BLAST of CmaCh04G002170 vs. TAIR 10
Match: AT4G11655.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 43.9 bits (102), Expect = 2.4e-04
Identity = 42/150 (28.00%), Postives = 63/150 (42.00%), Query Frame = 0


Query: 115 LVFRLSTFCFSLASAVFMITN-----SRGSGSDSPRWYDFDAFRYVFAANAIVAVYSLFE 174
           LV R  T      SA+ +  N      R    +S  +  +    Y F    I  VY+  +
Sbjct: 57  LVLRFITMVLCFVSALSLAVNVQRPSKRHLTQNSSSFASYPELLYCFGVAVIGFVYTSLQ 116

Query: 175 MIASVWEISREVTLFPEILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCRVTTA 234
               V +I+    L  E L  +  F  DQ   YLL+S+ S   A  I     D  +    
Sbjct: 117 TFKGVCDITHRGVLISEPLSDYISFIFDQVICYLLVSSSSVAIAW-IQHINEDAIKTLRN 176

Query: 235 FCVQSTISIALGFAGFLFLGLSTLLSGFRV 260
               S +S+++ F+ FL L LS LLSG+++
Sbjct: 177 ---NSIVSVSMSFSAFLVLTLSGLLSGYKL 202

The following BLAST results are available for this feature:

BLAST of CmaCh04G002170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SR15	1.6e-77	78.33	CASP-like protein 4C1 OS=Ricinus communis OX=3988 GN=RCOM_0464280 PE=2 SV=1	[more]
B9HTK2	2.2e-71	73.50	CASP-like protein 4C2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_822486 PE=3 S...	[more]
B9HMF8	9.3e-70	71.00	CASP-like protein 4C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820327 PE=3 S...	[more]
Q9M2U0	2.1e-66	66.50	CASP-like protein 4C1 OS=Arabidopsis thaliana OX=3702 GN=At3g55390 PE=2 SV=1	[more]
A9T836	1.4e-33	47.37	CASP-like protein 4C3 OS=Physcomitrium patens OX=3218 GN=PHYPADRAFT_192523 PE=2 ...	[more]

BLAST of CmaCh04G002170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JHP8	4.9e-106	100.00	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111485192 PE=3 SV=1	[more]
A0A6J1FUB8	2.4e-105	99.50	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111447351 PE=3 SV=1	[more]
A0A0A0KNW2	2.2e-98	93.69	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G182050 PE=3 SV=1	[more]
A0A6J1JST8	2.9e-98	95.00	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111488036 PE=3 SV=1	[more]
A0A5D3BVM1	1.9e-97	91.87	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00...	[more]

BLAST of CmaCh04G002170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022987730.1	1.0e-105	100.00	CASP-like protein 4C1 [Cucurbita maxima]	[more]
XP_022942248.1	5.0e-105	99.50	CASP-like protein 4C1 [Cucurbita moschata] >XP_023547993.1 CASP-like protein 4C1...	[more]
KAG6600052.1	4.1e-99	97.54	CASP-like protein 4C2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004147690.1	4.6e-98	93.69	CASP-like protein 4C1 [Cucumis sativus] >KGN50549.1 hypothetical protein Csa_021...	[more]
XP_022991395.1	5.9e-98	95.00	CASP-like protein 4C1 isoform X2 [Cucurbita maxima]	[more]

BLAST of CmaCh04G002170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55390.1	1.5e-67	66.50	Uncharacterised protein family (UPF0497)	[more]
AT1G79780.1	2.1e-08	30.83	Uncharacterised protein family (UPF0497)	[more]
AT2G36330.1	4.4e-06	28.86	Uncharacterised protein family (UPF0497)	[more]
AT5G40300.1	5.7e-06	29.88	Uncharacterised protein family (UPF0497)	[more]
AT4G11655.1	2.4e-04	28.00	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 111..247 e-value: 2.7E-30 score: 105.1
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 115..255 e-value: 2.0E-12 score: 45.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..95
None	No IPR available	PANTHER	PTHR11615:SF236	CASP-LIKE PROTEIN 4C1	coord: 71..271
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 71..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G002170.1	CmaCh04G002170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding