CmaCh04G001820 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G001820
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Location	Cma_Chr04: 883259 .. 885281 (-)
RNA-Seq Expression	CmaCh04G001820
Synteny	CmaCh04G001820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTATGTCTGTTTATCTGACTGGAAAATCTTATCAAGTTCCCTGTTTTGTTTTGTTTTTGGTTTTTTTTTTTCTTTTCTTTTGCTTTTTGTGTATATGGGTGTGGGCCGTTAAGAGATAACCATCAGGTTTGGGGAGTAGTTTTGTTCGTTGTCTGACAGAGAAAGCTCCAATTGTTAGCACTATGGAGAACAAGAAGCAAGTGGCTGCCTCTTCATCTTCAACTTCGGATCTTCTTTTTGGTCCCATGGACTCAAATTCAGCGTCTTCAACATCCACCACTGGATATTTTGGCTCTATTTTCCCACAACTGGTTGGTTCTTTAATTTCGACTACTACTAGTTCTTTGTTTCATTAATCTCCCTTTCTCTCTCAAGATGTGAGTTTCCTGATTTGGGTCATTTTCAGCATTTGCTTCTTGATTTTGCATGTTTCAAGTTGATGATATGACAGCTTAAAAATACGCAGAATAGGAACGAGAAAGCTTCTATGCTAGGGAAACAAAGTAATGGAACCTTAATTTCTTCTAGTGGAGATAAAAACTACTTGTTAAAGGGACTCCAAAAGTGGTTCTGTTCTGTTCTGTGTGAAATTTTTTTATGCGATTTTTAAAGCATGCATTGAACTTTTCTTCTCTGGTTTCAGGTGTTGGAAAGAGAGAAAAATCAGGATGTTGGGCCTGGAAAAGTTGGGAATCCAGGTTTCTTTAGCCTTCTAAAAATAGAATTTGAAATTTTGAACACATCTCCCTCACAAAGGATAAGAAGCCCATGTCTACCTTAGCAATCTCTCATGATTCTCTGTTGAATGCCTTTACAAACAATATTATCTCCTCCATTTAAGTAAAACTCGTTTTTTATCCTCTCAGATAAAGCTTCTGTAAATGGCATGAATGGAACTGGTGGTGCAAATGGGAAAGGTGAAAGCTCCATCTATCTGAACGAAACTATGGAACCAAGTTACTTTAGTTCCTCCATCTTTTACGGTGGCCAAGAAAACTACTCCCCAAGTACTAAACTCTCAGAATCTCACCATAATGTAAGCATTTCAGATTGATCACATGCCATCTTTCTAATAGTTTTCTGTAGTATTTGGATAAAACTAGAAGGCCTTTTGTTGGGATCGTAATGAACAAATAGAATGATTTGATATTGATCGAGTAATATTGGTTTGTTATGTGTCACTGTTGTGTTGATTACTTGATTGCTACTTAATGATGTTATGAACTCAATATTTTATCAGTCTAAGAAAGAAGAGGACAATGATGCAATTGGAAGCAATTCAAACTCTGCTTCAAGAGGAAACTGGTGGAAGGGTATGACAACTTCCATGGATTTGCTCTTGGAAAAACAAGAGACGATGATGGTTGAGACAATTTTTAACTTGCTATTCTGTTTTTCAGGTTCTCTTTATTACTGACACTCCCATCATCCTGGGATTTCCAGCTGCATAGGTAATACCAAACTATCCTCTTCGTTACTCATCGGCGAAACTCGTTCGTCTCATGTTTCAGACCATTCCATAGCCTATCATCCATCTAGTTGGCTGACATTCAGTTACTTGATAATGTTTCAGGGCTTGATTATATTATCATTTACAAGTGAAACTACCATATAGAAATAAAGTGGAGTTTGAAGAGGTCCCATGGGTCTGGTCAATGAATGAAAGCTTGTATGGTTCATATAGTGTGGGGATGTTAGTCAATTTTGGTAAGTGTGCGTTTCAAAGCTGAAGAATGCTCTGATGTAGCTTTCTTCTGCAACCAACTGGAAGTCTTTTCAATATCTCCATCTGAATCTATCCTTATTATCTGTTACTGTAATAACTATGTTCACACAGTATCTGATGAGTCTAGTTCAGTTTACTATTATTGTTCCTGCTGCTCCTGCTTGTGATTCCATGGTGATCTAAAGAGAGCCCTTTAAAACCAACCTCAATATGCATCTCTGCCTCCCACTTATGCTTGATGGATATGAACTTCATGAGGTAGGACAATGTCTTAATGATGTGGGTATAACGATAG

mRNA sequence

CTGTATGTCTGTTTATCTGACTGGAAAATCTTATCAAGTTCCCTGTTTTGTTTTGTTTTTGGTTTTTTTTTTTCTTTTCTTTTGCTTTTTGTGTATATGGGTGTGGGCCGTTAAGAGATAACCATCAGGTTTGGGGAGTAGTTTTGTTCGTTGTCTGACAGAGAAAGCTCCAATTGTTAGCACTATGGAGAACAAGAAGCAAGTGGCTGCCTCTTCATCTTCAACTTCGGATCTTCTTTTTGGTCCCATGGACTCAAATTCAGCGTCTTCAACATCCACCACTGGATATTTTGGCTCTATTTTCCCACAACTGGTGTTGGAAAGAGAGAAAAATCAGGATGTTGGGCCTGGAAAAGTTGGGAATCCAGATAAAGCTTCTGTAAATGGCATGAATGGAACTGGTGGTGCAAATGGGAAAGGTGAAAGCTCCATCTATCTGAACGAAACTATGGAACCAAGTTACTTTAGTTCCTCCATCTTTTACGGTGGCCAAGAAAACTACTCCCCAAGTACTAAACTCTCAGAATCTCACCATAATTCTAAGAAAGAAGAGGACAATGATGCAATTGGAAGCAATTCAAACTCTGCTTCAAGAGGAAACTGGTGGAAGGGTTCTCTTTATTACTGACACTCCCATCATCCTGGGATTTCCAGCTGCATAGGGCTTGATTATATTATCATTTACAAGTGAAACTACCATATAGAAATAAAGTGGAGTTTGAAGAGGTCCCATGGGTCTGGTCAATGAATGAAAGCTTGTATGGTTCATATAGTGTGGGGATGTTAGTCAATTTTGGTAAGTGTGCGTTTCAAAGCTGAAGAATGCTCTGATGTAGCTTTCTTCTGCAACCAACTGGAAGTCTTTTCAATATCTCCATCTGAATCTATCCTTATTATCTGTTACTGTAATAACTATGTTCACACAGTATCTGATGAGTCTAGTTCAGTTTACTATTATTGTTCCTGCTGCTCCTGCTTGTGATTCCATGGTGATCTAAAGAGAGCCCTTTAAAACCAACCTCAATATGCATCTCTGCCTCCCACTTATGCTTGATGGATATGAACTTCATGAGGTAGGACAATGTCTTAATGATGTGGGTATAACGATAG

Coding sequence (CDS)

ATGGAGAACAAGAAGCAAGTGGCTGCCTCTTCATCTTCAACTTCGGATCTTCTTTTTGGTCCCATGGACTCAAATTCAGCGTCTTCAACATCCACCACTGGATATTTTGGCTCTATTTTCCCACAACTGGTGTTGGAAAGAGAGAAAAATCAGGATGTTGGGCCTGGAAAAGTTGGGAATCCAGATAAAGCTTCTGTAAATGGCATGAATGGAACTGGTGGTGCAAATGGGAAAGGTGAAAGCTCCATCTATCTGAACGAAACTATGGAACCAAGTTACTTTAGTTCCTCCATCTTTTACGGTGGCCAAGAAAACTACTCCCCAAGTACTAAACTCTCAGAATCTCACCATAATTCTAAGAAAGAAGAGGACAATGATGCAATTGGAAGCAATTCAAACTCTGCTTCAAGAGGAAACTGGTGGAAGGGTTCTCTTTATTACTGA

Protein sequence

MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGNPDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSKKEEDNDAIGSNSNSASRGNWWKGSLYY

Homology

[Close]

BLAST of CmaCh04G001820 vs. ExPASy TrEMBL
Match: A0A6J1KBQ3 (uncharacterized protein LOC111491851 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491851 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.0e-73
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGN 60

Query: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK 120
           PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK
Sbjct: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK 120

Query: 121 KEEDNDAIGSNSNSASRGNWWKGSLYY 148
           KEEDNDAIGSNSNSASRGNWWKGSLYY
Sbjct: 121 KEEDNDAIGSNSNSASRGNWWKGSLYY 147

[Close]

BLAST of CmaCh04G001820 vs. ExPASy TrEMBL
Match: A0A6J1K7H1 (uncharacterized protein LOC111491851 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491851 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.6e-73
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLV+EREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK 120
           PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK
Sbjct: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK 120

Query: 121 KEEDNDAIGSNSNSASRGNWWKGSLYY 148
           KEEDNDAIGSNSNSASRGNWWKGSLYY
Sbjct: 121 KEEDNDAIGSNSNSASRGNWWKGSLYY 147

[Close]

BLAST of CmaCh04G001820 vs. ExPASy TrEMBL
Match: A0A6J1FNY5 (uncharacterized protein LOC111447180 OS=Cucurbita moschata OX=3662 GN=LOC111447180 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.1e-65
Identity = 135/141 (95.74%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLV+EREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK 120
           P  ASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSP TKLSESHHN K
Sbjct: 61  PVNASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNFK 120

Query: 121 KEEDNDAIGSNSNSASRGNWW 142
           KEEDNDAIGSNSNSASRGNW+
Sbjct: 121 KEEDNDAIGSNSNSASRGNWF 141

[Close]

BLAST of CmaCh04G001820 vs. ExPASy TrEMBL
Match: A0A6J1CC52 (uncharacterized protein LOC111010132 OS=Momordica charantia OX=3673 GN=LOC111010132 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 8.7e-49
Identity = 113/152 (74.34%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDV----GPG 60
           ME KKQVAASSSS+ D LFGPMDSNSASSTST GYFGSIFP  V+ERE+ QDV    G  
Sbjct: 1   MEXKKQVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGNRXGTC 60

Query: 61  KVGNPDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESH 120
            VGNPD AS+NG NGTGGA GK  SS+Y NETM PSYFSSSI YGGQENYSP TK SESH
Sbjct: 61  NVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFSSSILYGGQENYSPRTKASESH 120

Query: 121 HNSKKE-EDNDAIGSNSNSASRGNWWKGSLYY 148
           HN KKE +D++  G N NSASRGNWW+GSLYY
Sbjct: 121 HNFKKEGKDDEVNGGNPNSASRGNWWEGSLYY 152

[Close]

BLAST of CmaCh04G001820 vs. ExPASy TrEMBL
Match: A0A1S4E4X0 (uncharacterized protein LOC103502653 OS=Cucumis melo OX=3656 GN=LOC103502653 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.8e-47
Identity = 111/153 (72.55%), Postives = 125/153 (81.70%), Query Frame = 0


Query: 1   MENKK-QVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVG----P 60
           ME+KK QVA SSSS+ D +FGPMDSNSASSTSTTGYFGS+FP  V+ERE+ +DVG     
Sbjct: 1   MESKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVST 60

Query: 61  GKVGNPDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSES 120
            +VGNPD A++NG  GTG A+GK ESS+Y NETMEPSYFSSSIFYGGQENYSP T  S+S
Sbjct: 61  AEVGNPDNATINGKKGTGDASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

Query: 121 HHNSKKE-EDNDAIGSNSNSASRGNWWKGSLYY 148
           H N KKE +DNDA  SNSN ASRGNWWKGSLYY
Sbjct: 121 HPNFKKEGKDNDANESNSNPASRGNWWKGSLYY 153

[Close]

BLAST of CmaCh04G001820 vs. NCBI nr
Match: XP_022996688.1 (uncharacterized protein LOC111491851 isoform X2 [Cucurbita maxima])

HSP 1 Score: 284.3 bits (726), Expect = 6.1e-73
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGN 60

Query: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK 120
           PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK
Sbjct: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK 120

Query: 121 KEEDNDAIGSNSNSASRGNWWKGSLYY 148
           KEEDNDAIGSNSNSASRGNWWKGSLYY
Sbjct: 121 KEEDNDAIGSNSNSASRGNWWKGSLYY 147

[Close]

BLAST of CmaCh04G001820 vs. NCBI nr
Match: XP_022996680.1 (uncharacterized protein LOC111491851 isoform X1 [Cucurbita maxima])

HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLV+EREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK 120
           PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK
Sbjct: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK 120

Query: 121 KEEDNDAIGSNSNSASRGNWWKGSLYY 148
           KEEDNDAIGSNSNSASRGNWWKGSLYY
Sbjct: 121 KEEDNDAIGSNSNSASRGNWWKGSLYY 147

[Close]

BLAST of CmaCh04G001820 vs. NCBI nr
Match: XP_023546730.1 (uncharacterized protein LOC111805742 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69
Identity = 142/147 (96.60%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLV+EREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK 120
           PD ASVN MNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSP TKLSESHHN K
Sbjct: 61  PDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNFK 120

Query: 121 KEEDNDAIGSNSNSASRGNWWKGSLYY 148
           KEEDNDAIGSNSNSASRGNWWKGSLYY
Sbjct: 121 KEEDNDAIGSNSNSASRGNWWKGSLYY 147

[Close]

BLAST of CmaCh04G001820 vs. NCBI nr
Match: KAG7030695.1 (hypothetical protein SDJN02_04732 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.6 bits (693), Expect = 4.1e-69
Identity = 141/145 (97.24%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLV+EREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK 120
           PD ASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSP TKLSESHHN K
Sbjct: 61  PDNASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNFK 120

Query: 121 KEEDNDAIGSNSNSASRGNWWKGSL 146
           KEEDNDAIGSNSNSASRGNWWKGSL
Sbjct: 121 KEEDNDAIGSNSNSASRGNWWKGSL 145

[Close]

BLAST of CmaCh04G001820 vs. NCBI nr
Match: KAG6600026.1 (hypothetical protein SDJN03_05259, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 260.4 bits (664), Expect = 9.5e-66
Identity = 136/141 (96.45%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLV+EREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK 120
           PD ASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSP TKLSESHHN K
Sbjct: 61  PDNASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNFK 120

Query: 121 KEEDNDAIGSNSNSASRGNWW 142
           KEEDNDAIGSNSNSASRGNW+
Sbjct: 121 KEEDNDAIGSNSNSASRGNWF 141

[Close]

BLAST of CmaCh04G001820 vs. TAIR 10
Match: AT3G55646.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 2.4e-14
Identity = 61/151 (40.40%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 2   ENKKQVAASSSSTSDL-----LFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPG 61
           +NKK++ ++SSS+S L     +FGP  S S+SS+S TG F SIFP    ++   Q     
Sbjct: 5   KNKKKIVSASSSSSSLSSFDHIFGPRVS-SSSSSSATGLFKSIFPPPSADQLGRQVDFAS 64

Query: 62  KVGNPDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESH 121
           + G+    S N       +N K + S Y  ET  P + SSS++YGGQE YS +T  + +H
Sbjct: 65  QGGHVKYQSPNAKGER--SNKKEKKSYYNEETEPPCHLSSSLYYGGQETYSSTT--TTTH 124

Query: 122 HNSKKEEDNDAIGSNSNSASRGNWWKGSLYY 148
              KK+ +      +S  ASRGNWW+GSLYY
Sbjct: 125 DTYKKDGEE----GDSKRASRGNWWEGSLYY 146

[Close]

BLAST of CmaCh04G001820 vs. TAIR 10
Match: AT2G39855.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-13
Identity = 64/152 (42.11%), Postives = 77/152 (50.66%), Query Frame = 0


Query: 1   MENKKQVAASSSSTS---DLLFGPMDSNSASSTSTTGYFGSIF--PQLVLEREKNQDVGP 60
           M+ KK V+ SSSS+S   D +FGP  S+S SS STTG F SIF  P  V +       G 
Sbjct: 1   MDKKKSVSGSSSSSSSSLDHIFGPRVSHSYSS-STTGLFKSIFPPPSAVTQGNLTSRNGA 60

Query: 61  GKVGNPDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSES 120
            K   P         G    N K   S    ET  P   SSSI+YGGQ+NYS ST   ++
Sbjct: 61  AKY-QPTNFETPNERGERSKN-KERKSYQSEETQPPCNLSSSIYYGGQDNYSSSTTNPDA 120

Query: 121 HHNSKKEEDNDAIGSNSNSASRGNWWKGSLYY 148
           +    +E D       S SASRGNWW+GS  Y
Sbjct: 121 YKKDGEEGD-------SESASRGNWWEGSFNY 142

[Close]

BLAST of CmaCh04G001820 vs. TAIR 10
Match: AT5G05965.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-13
Identity = 62/149 (41.61%), Postives = 78/149 (52.35%), Query Frame = 0


Query: 1   MENKKQVAASSSSTS--DLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKV 60
           M+ KK  AASSS +S  D LFGP  S SASS ST     SIFP  V  R+K     P   
Sbjct: 1   MDIKKTKAASSSHSSSFDNLFGPKGSASASSCST--ILDSIFPPPV-ARKKGSHTAPEVQ 60

Query: 61  GNPDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHN 120
           GN  +A+    +               +E  E SY+SSSI+YGGQ++YSP      S   
Sbjct: 61  GNISQATDERSS---------------HEKRESSYYSSSIYYGGQQHYSPPRTDGSSTSP 120

Query: 121 SKKEEDNDAIGSNSNSASRGNWWKGSLYY 148
           S + ++ +     + S SRGNWWKGSLYY
Sbjct: 121 SHQPKETNDRTDITTSTSRGNWWKGSLYY 131

[Close]

BLAST of CmaCh04G001820 vs. TAIR 10
Match: AT5G59080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10
Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 1   MENKKQVAASSSSTSDL---LFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGK 60
           ME K +V +SSS++S     LFG  D +  SS+S  G F ++FP                
Sbjct: 1   MEGKGRVGSSSSTSSSFTAELFGSKDPSPPSSSS--GIFSTMFP---------------- 60

Query: 61  VGNPDKASV-NGMNGTGGANGKGESSIYLNE-TMEPSYFSSSIFYGGQENYSPST---KL 120
             +P K S  +G N   G+  +   S+   E  +EP + SSS++YGGQ+ Y+ ST     
Sbjct: 61  --HPSKGSARDGSNSKHGSQAQRRESLNAQEDRVEPCHLSSSLYYGGQDVYARSTTNQTY 120

Query: 121 SESHHNSKKEEDNDAIGSNSNSASRGNWWKGSLYY 148
               ++ ++  ++DA G N    SRGNWW+GSLYY
Sbjct: 121 PPVKNDRRRSGEDDANGQNPQDVSRGNWWQGSLYY 135

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BLAST of CmaCh04G001820 vs. TAIR 10
Match: AT5G02020.1 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). )

HSP 1 Score: 58.9 bits (141), Expect = 3.9e-09
Identity = 60/156 (38.46%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 1   MENKKQVAASSS--STSDL---LFGPMDSNSASSTSTTGYFGSIF--PQLVLEREK-NQD 60
           ME +K+ A+SSS  S+S L   LFG  +  + SS S++G  GSIF  P  VL RE   Q+
Sbjct: 1   MEGRKKKASSSSPCSSSSLTSELFGSRE--NPSSPSSSGILGSIFPPPSKVLGRESVRQE 60

Query: 61  VGPGKVGNPDKASVNGMNGTGGANGKGESSIY-LNETMEPSYFSSSIFYGGQENYSPSTK 120
              G   N   +   G         +   S Y  ++ ++P + SSSI+YGG + Y    +
Sbjct: 61  TVTGGCWNEKTSKTGGNVDRNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVYF-QPQ 120

Query: 121 LSESHHNSKKEEDNDAIGSNSNSASRGNWWKGSLYY 148
            S S+  +KK+   D    +S SASRGNWW+GSLYY
Sbjct: 121 NSTSNSTNKKDGGED----DSGSASRGNWWQGSLYY 149

The following BLAST results are available for this feature:

BLAST of CmaCh04G001820 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh04G001820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KBQ3	3.0e-73	100.00	uncharacterized protein LOC111491851 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1K7H1	6.6e-73	99.32	uncharacterized protein LOC111491851 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FNY5	5.1e-65	95.74	uncharacterized protein LOC111447180 OS=Cucurbita moschata OX=3662 GN=LOC1114471...	[more]
A0A6J1CC52	8.7e-49	74.34	uncharacterized protein LOC111010132 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A1S4E4X0	2.8e-47	72.55	uncharacterized protein LOC103502653 OS=Cucumis melo OX=3656 GN=LOC103502653 PE=...	[more]

BLAST of CmaCh04G001820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022996688.1	6.1e-73	100.00	uncharacterized protein LOC111491851 isoform X2 [Cucurbita maxima]	[more]
XP_022996680.1	1.4e-72	99.32	uncharacterized protein LOC111491851 isoform X1 [Cucurbita maxima]	[more]
XP_023546730.1	1.1e-69	96.60	uncharacterized protein LOC111805742 [Cucurbita pepo subsp. pepo]	[more]
KAG7030695.1	4.1e-69	97.24	hypothetical protein SDJN02_04732 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600026.1	9.5e-66	96.45	hypothetical protein SDJN03_05259, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmaCh04G001820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55646.1	2.4e-14	40.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G39855.2	1.5e-13	42.11	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G05965.1	2.0e-13	41.61	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G59080.1	1.2e-10	34.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G02020.1	3.9e-09	38.46	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine ric...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..83
None	No IPR available	PANTHER	PTHR33738:SF21	PLANT/PROTEIN-RELATED	coord: 1..147
None	No IPR available	PANTHER	PTHR33738	EMB\|CAB82975.1	coord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G001820.1	CmaCh04G001820.1	mRNA