CmaCh03G013840 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G013840
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor bHLH144-like
Location	Cma_Chr03: 8761183 .. 8761932 (+)
RNA-Seq Expression	CmaCh03G013840
Synteny	CmaCh03G013840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTTATGCAGAGTGACCTCAACTGCTACCTCAAAAACACGATGCTTCCAACAGCAAACCAAGGGGGTGATAATCACATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTACTGGGCGAAACAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTCGACCACACTGATAATCGAAGCCAAATCATGTTCCATCCTGCAATTGCCAACAAACTTAGTGGTCCTACTGCGAATATGTGCTCGAAGTACATCCAAAAGAACTTTTACGTCAATGATGAGCATAATGATGATAGTAGAGAAATATCATCTCCTTTGATGGAGGATTTGGATGACATCGATGCATTATTGAGCTTGGAAGATGAAGATCACGAAGACATTGATGGGTATGAAGATGAAGAGATCAGCACTGCAAGGTCTCATTTGAATTATGGGAATCAATCCCCTGATTCTTCATCCTCTTATAGTTCAGAACCCAGGAAGAATCAGTCATTTAATCCTGTCCACAAGTTGTCAAGCAGTGGAAGAAGCAGCTGCAACAGTGACATGAAACAGTTAAAAGTGAAGAAAATGGTGAGAAAGCTGAGAGAGATTCTACCTGGTGGTTACCAAATGACAACAGTCACTGTTCTCGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGATGAAGTGCAGAAACTTGGAGTCGGGGGCTTGGAGAACTAA

mRNA sequence

ATGGACTTTATGCAGAGTGACCTCAACTGCTACCTCAAAAACACGATGCTTCCAACAGCAAACCAAGGGGGTGATAATCACATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTACTGGGCGAAACAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTCGACCACACTGATAATCGAAGCCAAATCATGTTCCATCCTGCAATTGCCAACAAACTTAGTGGTCCTACTGCGAATATGTGCTCGAAGTACATCCAAAAGAACTTTTACGTCAATGATGAGCATAATGATGATAGTAGAGAAATATCATCTCCTTTGATGGAGGATTTGGATGACATCGATGCATTATTGAGCTTGGAAGATGAAGATCACGAAGACATTGATGGGTATGAAGATGAAGAGATCAGCACTGCAAGGTCTCATTTGAATTATGGGAATCAATCCCCTGATTCTTCATCCTCTTATAGTTCAGAACCCAGGAAGAATCAGTCATTTAATCCTGTCCACAAGTTGTCAAGCAGTGGAAGAAGCAGCTGCAACAGTGACATGAAACAGTTAAAAGTGAAGAAAATGGTGAGAAAGCTGAGAGAGATTCTACCTGGTGGTTACCAAATGACAACAGTCACTGTTCTCGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGATGAAGTGCAGAAACTTGGAGTCGGGGGCTTGGAGAACTAA

Coding sequence (CDS)

ATGGACTTTATGCAGAGTGACCTCAACTGCTACCTCAAAAACACGATGCTTCCAACAGCAAACCAAGGGGGTGATAATCACATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTACTGGGCGAAACAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTCGACCACACTGATAATCGAAGCCAAATCATGTTCCATCCTGCAATTGCCAACAAACTTAGTGGTCCTACTGCGAATATGTGCTCGAAGTACATCCAAAAGAACTTTTACGTCAATGATGAGCATAATGATGATAGTAGAGAAATATCATCTCCTTTGATGGAGGATTTGGATGACATCGATGCATTATTGAGCTTGGAAGATGAAGATCACGAAGACATTGATGGGTATGAAGATGAAGAGATCAGCACTGCAAGGTCTCATTTGAATTATGGGAATCAATCCCCTGATTCTTCATCCTCTTATAGTTCAGAACCCAGGAAGAATCAGTCATTTAATCCTGTCCACAAGTTGTCAAGCAGTGGAAGAAGCAGCTGCAACAGTGACATGAAACAGTTAAAAGTGAAGAAAATGGTGAGAAAGCTGAGAGAGATTCTACCTGGTGGTTACCAAATGACAACAGTCACTGTTCTCGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGATGAAGTGCAGAAACTTGGAGTCGGGGGCTTGGAGAACTAA

Protein sequence

MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPLMEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

Homology

[Close]

BLAST of CmaCh03G013840 vs. ExPASy Swiss-Prot
Match: Q9ASX9 (Transcription factor bHLH144 OS=Arabidopsis thaliana OX=3702 GN=BHLH144 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.4e-34
Identity = 105/252 (41.67%), Postives = 151/252 (59.92%), Query Frame = 0


Query: 12  LKNTMLP-TANQGGDNHMQIPLS--SAFPSVLPTGRNNLGPFNTVEFQPSEVCPQNFIIF 71
           ++N   P  +++ GD +M  P +  S++ ++ P       P++ VE QPS VCP+NF+IF
Sbjct: 1   MQNNQFPHFSDEVGDRNMHNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIF 60

Query: 72  DHTDNRSQIMFHPAIANKL-SGPTANMCSKYIQKNFYVN---DEHNDDSREISSPLMEDL 131
           D T +RSQ+M+HP + +KL + P+ N  +   Q N YV      + +  +E+SS   ED 
Sbjct: 61  DQTYDRSQVMYHPELTHKLMNTPSLNNLASTFQ-NEYVGGSYGNYGNYEQEVSSSYQEDP 120

Query: 132 DDIDALLSLED--EDHEDIDGYED----EEISTAR-SHLNYGNQSPDSSSSYSSEPRKNQ 191
           ++IDALLS ++  E+++D +G ED    EE+STAR S  +YGN + +S  S       N 
Sbjct: 121 NEIDALLSADEDYEENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNN 180

Query: 192 SFNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKD 250
           + +    LS S  SS N    + K+KKM+  LR I+PGG QM T  VLDEAV+YLKSLK 
Sbjct: 181 NNSRKQSLSGSASSSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKI 240

[Close]

BLAST of CmaCh03G013840 vs. ExPASy TrEMBL
Match: A0A6J1INB7 (transcription factor bHLH144-like OS=Cucurbita maxima OX=3661 GN=LOC111477984 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 2.4e-136
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFN 180
           MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFN
Sbjct: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFN 180

Query: 181 PVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ 240
           PVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ
Sbjct: 181 PVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ 240

Query: 241 KLGVGGLEN 250
           KLGVGGLEN
Sbjct: 241 KLGVGGLEN 249

[Close]

BLAST of CmaCh03G013840 vs. ExPASy TrEMBL
Match: A0A6J1EDR8 (transcription factor bHLH144-like OS=Cucurbita moschata OX=3662 GN=LOC111433273 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 4.9e-129
Identity = 240/250 (96.00%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           MDFMQSDLNCYLKN MLPTANQGGDNHMQIPLSSA+PSVLP GRNNLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYPSVLPPGRNNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPD-SSSSYSSEPRKNQSF 180
           MEDLDDIDALLSL+DEDHEDIDG EDEEISTARSHLNYGNQSPD SSSSYSS+PRKN+SF
Sbjct: 121 MEDLDDIDALLSLDDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSF 180

Query: 181 NPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240
           NPVHKLSSSGRSS +SDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV
Sbjct: 181 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240

Query: 241 QKLGVGGLEN 250
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 250

[Close]

BLAST of CmaCh03G013840 vs. ExPASy TrEMBL
Match: A0A0A0KLX4 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522710 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.4e-115
Identity = 221/251 (88.05%), Postives = 233/251 (92.83%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           MDFMQSDLN YLK    PTA QG DNHMQIPLSSAFPSVLP GR NLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CPQNFIIFDHTDNRSQIMFHPA+ANKLSGPTANMCSKYIQKNF VND+H++D REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPALANKLSGPTANMCSKYIQKNFCVNDKHHED-REISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSS--YSSEPRKNQS 180
           MEDLDDIDALLSLE+E+HED+DG ED+E+STARSHLNYGNQSPDSSSS  YSS+PRKN S
Sbjct: 121 MEDLDDIDALLSLENENHEDLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHS 180

Query: 181 FNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240
           FNPVHK SSSG SSCNSD+KQLK+KKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDE
Sbjct: 181 FNPVHKSSSSG-SSCNSDVKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDE 240

Query: 241 VQKLGVGGLEN 250
           VQKLGVGGLEN
Sbjct: 241 VQKLGVGGLEN 249

[Close]

BLAST of CmaCh03G013840 vs. ExPASy TrEMBL
Match: A0A1S3AYV1 (transcription factor bHLH144 OS=Cucumis melo OX=3656 GN=LOC103484384 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 9.1e-115
Identity = 222/251 (88.45%), Postives = 231/251 (92.03%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           MDFMQSDLN YLK    PTA QG DNHMQIPLSSAFPSVLP GR NLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNF VND H +D REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDNHYED-REISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSS--YSSEPRKNQS 180
           MEDLDDIDALLSLE+E+HE +DG ED+E+STARSHLNYGNQSPDSSSS  YSS+PRKN S
Sbjct: 121 MEDLDDIDALLSLENENHEGLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHS 180

Query: 181 FNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240
           FNPVHK SSSG SSC+SDMKQLK+KKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE
Sbjct: 181 FNPVHKSSSSG-SSCSSDMKQLKLKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240

Query: 241 VQKLGVGGLEN 250
           VQKLGVGGLEN
Sbjct: 241 VQKLGVGGLEN 249

[Close]

BLAST of CmaCh03G013840 vs. ExPASy TrEMBL
Match: A0A5A7UBJ4 (Transcription factor bHLH144 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008860 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 5.5e-112
Identity = 218/251 (86.85%), Postives = 227/251 (90.44%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           M   QSDLN YLK    PTA QG DNHMQIPLSSAFPSVLP GR NLGPFNTVEFQPSEV
Sbjct: 32  MQVCQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 91

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNF VND H +D REISSPL
Sbjct: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDNHYED-REISSPL 151

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSS--YSSEPRKNQS 180
           MEDLDDIDALLSLE+E+HE +DG ED+E+STARSHLNYGNQSPDSSSS  YSS+PRKN S
Sbjct: 152 MEDLDDIDALLSLENENHEGLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHS 211

Query: 181 FNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240
           FNPVHK SSSG SSC+SDMKQLK+KKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDE
Sbjct: 212 FNPVHKSSSSG-SSCSSDMKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDE 271

Query: 241 VQKLGVGGLEN 250
           VQKLGVGGLEN
Sbjct: 272 VQKLGVGGLEN 280

[Close]

BLAST of CmaCh03G013840 vs. NCBI nr
Match: XP_022977790.1 (transcription factor bHLH144-like [Cucurbita maxima])

HSP 1 Score: 494.6 bits (1272), Expect = 5.1e-136
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFN 180
           MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFN
Sbjct: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFN 180

Query: 181 PVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ 240
           PVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ
Sbjct: 181 PVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ 240

Query: 241 KLGVGGLEN 250
           KLGVGGLEN
Sbjct: 241 KLGVGGLEN 249

[Close]

BLAST of CmaCh03G013840 vs. NCBI nr
Match: XP_023544178.1 (transcription factor bHLH144 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 474.2 bits (1219), Expect = 7.1e-130
Identity = 243/250 (97.20%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           MDFMQSDLNCYLKN MLPTANQGGDNHMQIPLSSAFPSVLP GRNNLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAFPSVLPPGRNNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPD-SSSSYSSEPRKNQSF 180
           MEDLDDIDALLSLEDEDHEDIDG EDEEISTARSHLNYGNQSPD SSSSYSS+PRKNQSF
Sbjct: 121 MEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNQSF 180

Query: 181 NPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240
           NPVHKLSSSGRSS +SDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV
Sbjct: 181 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240

Query: 241 QKLGVGGLEN 250
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 250

[Close]

BLAST of CmaCh03G013840 vs. NCBI nr
Match: XP_022926036.1 (transcription factor bHLH144-like [Cucurbita moschata])

HSP 1 Score: 470.3 bits (1209), Expect = 1.0e-128
Identity = 240/250 (96.00%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           MDFMQSDLNCYLKN MLPTANQGGDNHMQIPLSSA+PSVLP GRNNLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYPSVLPPGRNNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPD-SSSSYSSEPRKNQSF 180
           MEDLDDIDALLSL+DEDHEDIDG EDEEISTARSHLNYGNQSPD SSSSYSS+PRKN+SF
Sbjct: 121 MEDLDDIDALLSLDDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSF 180

Query: 181 NPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240
           NPVHKLSSSGRSS +SDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV
Sbjct: 181 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240

Query: 241 QKLGVGGLEN 250
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 250

[Close]

BLAST of CmaCh03G013840 vs. NCBI nr
Match: KAG7034698.1 (Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 454.9 bits (1169), Expect = 4.4e-124
Identity = 236/250 (94.40%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           M   QSDLNCYLKN MLPTANQGGDNHMQIPLSSA+ SVLP GRNNLGPFNTVEFQPSEV
Sbjct: 32  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEV 91

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDD REISSPL
Sbjct: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDD-REISSPL 151

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPD-SSSSYSSEPRKNQSF 180
           MEDLDDIDALLSLEDEDHEDIDG EDEEISTARSHLNYGNQSPD SSSSYSS+PRKN+SF
Sbjct: 152 MEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSF 211

Query: 181 NPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240
           NPVHKLSSSGRSS +SDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV
Sbjct: 212 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 271

Query: 241 QKLGVGGLEN 250
           QKLGVGGLEN
Sbjct: 272 QKLGVGGLEN 280

[Close]

BLAST of CmaCh03G013840 vs. NCBI nr
Match: XP_038881999.1 (transcription factor bHLH144 [Benincasa hispida])

HSP 1 Score: 431.0 bits (1107), Expect = 6.9e-117
Identity = 226/250 (90.40%), Postives = 233/250 (93.20%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           MDFMQSDLN YLK  M P ANQG DNHMQIPLSSAFPSVLP GR NLGPFN VEFQPSEV
Sbjct: 1   MDFMQSDLNFYLKQAMHPRANQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNNVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNF +NDEH +D REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCINDEHYED-REISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPD-SSSSYSSEPRKNQSF 180
           MEDLDDIDALLSL+DEDHED+DG EDEE STARSHLNYGNQSPD SSSSYSS+PRKN+SF
Sbjct: 121 MEDLDDIDALLSLDDEDHEDLDGSEDEERSTARSHLNYGNQSPDSSSSSYSSKPRKNKSF 180

Query: 181 NPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240
           NPVHK SSSG SSC+SDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV
Sbjct: 181 NPVHKSSSSG-SSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240

Query: 241 QKLGVGGLEN 250
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 248

[Close]

BLAST of CmaCh03G013840 vs. TAIR 10
Match: AT1G29950.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.4e-35
Identity = 105/252 (41.67%), Postives = 151/252 (59.92%), Query Frame = 0


Query: 12  LKNTMLP-TANQGGDNHMQIPLS--SAFPSVLPTGRNNLGPFNTVEFQPSEVCPQNFIIF 71
           ++N   P  +++ GD +M  P +  S++ ++ P       P++ VE QPS VCP+NF+IF
Sbjct: 1   MQNNQFPHFSDEVGDRNMHNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIF 60

Query: 72  DHTDNRSQIMFHPAIANKL-SGPTANMCSKYIQKNFYVN---DEHNDDSREISSPLMEDL 131
           D T +RSQ+M+HP + +KL + P+ N  +   Q N YV      + +  +E+SS   ED 
Sbjct: 61  DQTYDRSQVMYHPELTHKLMNTPSLNNLASTFQ-NEYVGGSYGNYGNYEQEVSSSYQEDP 120

Query: 132 DDIDALLSLED--EDHEDIDGYED----EEISTAR-SHLNYGNQSPDSSSSYSSEPRKNQ 191
           ++IDALLS ++  E+++D +G ED    EE+STAR S  +YGN + +S  S       N 
Sbjct: 121 NEIDALLSADEDYEENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNN 180

Query: 192 SFNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKD 250
           + +    LS S  SS N    + K+KKM+  LR I+PGG QM T  VLDEAV+YLKSLK 
Sbjct: 181 NNSRKQSLSGSASSSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKI 240

[Close]

BLAST of CmaCh03G013840 vs. TAIR 10
Match: AT1G29950.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.4e-35
Identity = 105/252 (41.67%), Postives = 151/252 (59.92%), Query Frame = 0


Query: 12  LKNTMLP-TANQGGDNHMQIPLS--SAFPSVLPTGRNNLGPFNTVEFQPSEVCPQNFIIF 71
           ++N   P  +++ GD +M  P +  S++ ++ P       P++ VE QPS VCP+NF+IF
Sbjct: 1   MQNNQFPHFSDEVGDRNMHNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIF 60

Query: 72  DHTDNRSQIMFHPAIANKL-SGPTANMCSKYIQKNFYVN---DEHNDDSREISSPLMEDL 131
           D T +RSQ+M+HP + +KL + P+ N  +   Q N YV      + +  +E+SS   ED 
Sbjct: 61  DQTYDRSQVMYHPELTHKLMNTPSLNNLASTFQ-NEYVGGSYGNYGNYEQEVSSSYQEDP 120

Query: 132 DDIDALLSLED--EDHEDIDGYED----EEISTAR-SHLNYGNQSPDSSSSYSSEPRKNQ 191
           ++IDALLS ++  E+++D +G ED    EE+STAR S  +YGN + +S  S       N 
Sbjct: 121 NEIDALLSADEDYEENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNN 180

Query: 192 SFNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKD 250
           + +    LS S  SS N    + K+KKM+  LR I+PGG QM T  VLDEAV+YLKSLK 
Sbjct: 181 NNSRKQSLSGSASSSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKI 240

[Close]

BLAST of CmaCh03G013840 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 3.8e-04
Identity = 18/42 (42.86%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 201 KVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKL 243
           ++ + +R L+ ++PGG +M T ++LDEA+ Y+K LK +VQ L
Sbjct: 140 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 181

[Close]

BLAST of CmaCh03G013840 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 3.8e-04
Identity = 18/42 (42.86%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 201 KVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKL 243
           ++ + +R L+ ++PGG +M T ++LDEA+ Y+K LK +VQ L
Sbjct: 143 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 184

The following BLAST results are available for this feature:

BLAST of CmaCh03G013840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASX9	3.4e-34	41.67	Transcription factor bHLH144 OS=Arabidopsis thaliana OX=3702 GN=BHLH144 PE=1 SV=...	[more]

BLAST of CmaCh03G013840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1INB7	2.4e-136	100.00	transcription factor bHLH144-like OS=Cucurbita maxima OX=3661 GN=LOC111477984 PE...	[more]
A0A6J1EDR8	4.9e-129	96.00	transcription factor bHLH144-like OS=Cucurbita moschata OX=3662 GN=LOC111433273 ...	[more]
A0A0A0KLX4	2.4e-115	88.05	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522710 PE=4 S...	[more]
A0A1S3AYV1	9.1e-115	88.45	transcription factor bHLH144 OS=Cucumis melo OX=3656 GN=LOC103484384 PE=4 SV=1	[more]
A0A5A7UBJ4	5.5e-112	86.85	Transcription factor bHLH144 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of CmaCh03G013840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977790.1	5.1e-136	100.00	transcription factor bHLH144-like [Cucurbita maxima]	[more]
XP_023544178.1	7.1e-130	97.20	transcription factor bHLH144 [Cucurbita pepo subsp. pepo]	[more]
XP_022926036.1	1.0e-128	96.00	transcription factor bHLH144-like [Cucurbita moschata]	[more]
KAG7034698.1	4.4e-124	94.40	Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038881999.1	6.9e-117	90.40	transcription factor bHLH144 [Benincasa hispida]	[more]

BLAST of CmaCh03G013840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29950.1	2.4e-35	41.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G29950.2	2.4e-35	41.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G50330.1	3.8e-04	42.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	3.8e-04	42.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..197
None	No IPR available	PANTHER	PTHR36066:SF11	TRANSCRIPTION FACTOR BHLH144	coord: 4..247
IPR037546	Transcription factor SAC51-like	PANTHER	PTHR36066	TRANSCRIPTION FACTOR BHLH145	coord: 4..247
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 186..235 score: 8.943262
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 201..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G013840.1	CmaCh03G013840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity