CmaCh03G011730 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G011730
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RAB6-interacting golgin
Location	Cma_Chr03: 7847798 .. 7848961 (+)
RNA-Seq Expression	CmaCh03G011730
Synteny	CmaCh03G011730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGATGAAAGGAGAGGGAATTCATTCATTCATCCATTCATACAAGCAAGAACAGAAGCGCTTCCTCTGGAGGGAAAGGAGAAAATTCAAGAGATGCAGAACGAGCAGAATCCGCAGCAGCTTCAAGTAATGTTACAGAATTCTGGAAATTTGAGTTTCAGTAGCAAAGAAGATGAAGAGATGTCCAAATCGGCGCTTTCGGCTTTTAGGGAAAAGGAGGAGGAGATTGAGCGGATGAGGACTGAACTTCAGCAAAAACTTCAAGCTCGACTCGGCCGAGTCGAGGAAGAATCAAGGCGTTTGGCCTCCATTCGAGAGGTTGTTCATCTCTTTCCTCCCTCCCTAAGGCCTAAAACCTAAACCCTAACTCTTTCGTTTTCCTTTCATTTTTTTTTTTTTTTTCCTATTTCATCTCTGCAACTGCAACTGCAACTGCAATTTGTGTTGGAATTCTGATTGTGTGAGAGTTCGAGTTTAATTTATTTAGAAATTTTGGATTAAATGTGGAACGATGAACAGGAACTTGAAGGCATAGATGGAGATCCAACGAGGAAGGAAATTGGACAAATCCGTAAGAGAATTGATACGCTAAACAAGGAATTAAAGCCTCTTGGACAAATATGCCAAAAGAAGGTGATTTCCATGGCTCTACTTTCGTTTCTATAAATTATAGTTCTACAAAAAATAAAAATAAAAAGAAAAATGGTTGGAATTGTTTGGTGGGAGCAGGAGAAAGAGTACAAAGATGCCCTCGATGCTTTCAATGAAAAGAACAACGAGAAAGTACAGTGTATATCAAAACTAATGGAGGTTAGTAGCTTTCTTCTTCAGTTCTTATTCTTTTATTTAATTAATTACTCATTTAGATTACTTAATTCGGTGTTATTTGTAGATGGTTGGTGAAAGTGAAAGGGTGAGGCTGAAGAGGTTGGAAGAACTGAGTAAGCATGTGGATAACAACCCTTCCTAATTCAATTCCCCTAAATTAATTCCCCTGTTTCTGTTTTTGTTAGTTTTCTTCATTCTTAAACTTTTAATTTGTTTATGTCTGTTTGAGTGATTTGTTTCTCTTTTGATTTCATTTAGGGTGGCTCACATATATATGTATGTATGTATGTATTGCTTTTAACCATACTATATATATATAATCTTTTCATTTCCTAC

mRNA sequence

GGGGATGAAAGGAGAGGGAATTCATTCATTCATCCATTCATACAAGCAAGAACAGAAGCGCTTCCTCTGGAGGGAAAGGAGAAAATTCAAGAGATGCAGAACGAGCAGAATCCGCAGCAGCTTCAAGTAATGTTACAGAATTCTGGAAATTTGAGTTTCAGTAGCAAAGAAGATGAAGAGATGTCCAAATCGGCGCTTTCGGCTTTTAGGGAAAAGGAGGAGGAGATTGAGCGGATGAGGACTGAACTTCAGCAAAAACTTCAAGCTCGACTCGGCCGAGTCGAGGAAGAATCAAGGCGTTTGGCCTCCATTCGAGAGGAACTTGAAGGCATAGATGGAGATCCAACGAGGAAGGAAATTGGACAAATCCGTAAGAGAATTGATACGCTAAACAAGGAATTAAAGCCTCTTGGACAAATATGCCAAAAGAAGGAGAAAGAGTACAAAGATGCCCTCGATGCTTTCAATGAAAAGAACAACGAGAAAGTACAGTGTATATCAAAACTAATGGAGATGGTTGGTGAAAGTGAAAGGGTGAGGCTGAAGAGGTTGGAAGAACTGAGTAAGCATGTGGATAACAACCCTTCCTAATTCAATTCCCCTAAATTAATTCCCCTGTTTCTGTTTTTGTTAGTTTTCTTCATTCTTAAACTTTTAATTTGTTTATGTCTGTTTGAGTGATTTGTTTCTCTTTTGATTTCATTTAGGGTGGCTCACATATATATGTATGTATGTATGTATTGCTTTTAACCATACTATATATATATAATCTTTTCATTTCCTAC

Coding sequence (CDS)

ATGCAGAACGAGCAGAATCCGCAGCAGCTTCAAGTAATGTTACAGAATTCTGGAAATTTGAGTTTCAGTAGCAAAGAAGATGAAGAGATGTCCAAATCGGCGCTTTCGGCTTTTAGGGAAAAGGAGGAGGAGATTGAGCGGATGAGGACTGAACTTCAGCAAAAACTTCAAGCTCGACTCGGCCGAGTCGAGGAAGAATCAAGGCGTTTGGCCTCCATTCGAGAGGAACTTGAAGGCATAGATGGAGATCCAACGAGGAAGGAAATTGGACAAATCCGTAAGAGAATTGATACGCTAAACAAGGAATTAAAGCCTCTTGGACAAATATGCCAAAAGAAGGAGAAAGAGTACAAAGATGCCCTCGATGCTTTCAATGAAAAGAACAACGAGAAAGTACAGTGTATATCAAAACTAATGGAGATGGTTGGTGAAAGTGAAAGGGTGAGGCTGAAGAGGTTGGAAGAACTGAGTAAGCATGTGGATAACAACCCTTCCTAA

Protein sequence

MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDALDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNNPS

Homology

[Close]

BLAST of CmaCh03G011730 vs. ExPASy TrEMBL
Match: A0A6J1IS07 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111478791 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 9.0e-79
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL 60
           MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL
Sbjct: 1   MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL 60

Query: 61  GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA 120
           GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA
Sbjct: 61  GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA 120

Query: 121 LDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNNPS 166
           LDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNNPS
Sbjct: 121 LDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNNPS 165

[Close]

BLAST of CmaCh03G011730 vs. ExPASy TrEMBL
Match: A0A6J1EJF7 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111433155 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.0e-77
Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL 60
           MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL
Sbjct: 1   MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL 60

Query: 61  GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA 120
           GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA
Sbjct: 61  GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA 120

Query: 121 LDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNNPS 166
           LDAFNEKNNEKV CISKLMEMVGESERVRLKRLEELSKHVDNN S
Sbjct: 121 LDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS 165

[Close]

BLAST of CmaCh03G011730 vs. ExPASy TrEMBL
Match: A0A6J1I5J6 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111471218 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.1e-63
Identity = 142/163 (87.12%), Postives = 151/163 (92.64%), Query Frame = 0


Query: 2   QNEQNP--QQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQAR 61
           Q EQNP  QQLQ+MLQNSGN SFSSK+DEEMSKSALSAFREKEEEIERMR E+QQKLQAR
Sbjct: 3   QAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRAEVQQKLQAR 62

Query: 62  LGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKD 121
           LGRVEEE+RRLASIREELE I  DP RKEIGQIRKRID +NKELKPLGQ CQKKEKEYKD
Sbjct: 63  LGRVEEENRRLASIREELEAI-ADPMRKEIGQIRKRIDAVNKELKPLGQTCQKKEKEYKD 122

Query: 122 ALDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDN 163
           ALDAFNEKN+EKVQ +SKLMEMVGESER+RL+RLEELSKHVDN
Sbjct: 123 ALDAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDN 164

[Close]

BLAST of CmaCh03G011730 vs. ExPASy TrEMBL
Match: A0A1S3CIS0 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500877 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.1e-63
Identity = 138/163 (84.66%), Postives = 150/163 (92.02%), Query Frame = 0


Query: 1   MQNEQN-PQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQAR 60
           MQ +QN PQQLQ ML+NSGNLSFSSKED+EMSKSAL+AFREKEEEI+RMRTEL  KLQ R
Sbjct: 1   MQTDQNPPQQLQTMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60

Query: 61  LGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKD 120
           LGRV+EESRRL+S+REELE I GDP RKEIGQIRK+ID LNKELKPLG  CQKKEKEYKD
Sbjct: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGVTCQKKEKEYKD 120

Query: 121 ALDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDN 163
           ALD+FNEKNNEKVQ ISKLMEMVGESE++RLKRLEELSKHVDN
Sbjct: 121 ALDSFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDN 163

[Close]

BLAST of CmaCh03G011730 vs. ExPASy TrEMBL
Match: A0A6J1HDL2 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111463194 PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 5.3e-63
Identity = 141/163 (86.50%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 2   QNEQNP--QQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQAR 61
           Q EQNP  QQLQ+MLQNSGN SFSSK+DEEMSKSALSAFREKEEEIERMRTE+QQKLQAR
Sbjct: 3   QAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQAR 62

Query: 62  LGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKD 121
           LGRVEEE+RRLASIREELE I  DP RKEIGQIRKRID +NKELKPLGQ CQK+EKEYKD
Sbjct: 63  LGRVEEENRRLASIREELEAI-ADPMRKEIGQIRKRIDAVNKELKPLGQTCQKREKEYKD 122

Query: 122 ALDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDN 163
           AL+AFNEKN+EKVQ +SKLMEMVGESER+RL+RLEELSKHVDN
Sbjct: 123 ALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDN 164

[Close]

BLAST of CmaCh03G011730 vs. NCBI nr
Match: XP_022979025.1 (uncharacterized protein LOC111478791 [Cucurbita maxima])

HSP 1 Score: 302.8 bits (774), Expect = 1.9e-78
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL 60
           MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL
Sbjct: 1   MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL 60

Query: 61  GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA 120
           GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA
Sbjct: 61  GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA 120

Query: 121 LDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNNPS 166
           LDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNNPS
Sbjct: 121 LDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNNPS 165

[Close]

BLAST of CmaCh03G011730 vs. NCBI nr
Match: XP_023543803.1 (uncharacterized protein LOC111803564 [Cucurbita pepo subsp. pepo] >KAG7034517.1 hypothetical protein SDJN02_04247 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77
Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL 60
           MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL
Sbjct: 1   MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL 60

Query: 61  GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA 120
           GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA
Sbjct: 61  GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA 120

Query: 121 LDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNNPS 166
           LDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNN S
Sbjct: 121 LDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNNTS 165

[Close]

BLAST of CmaCh03G011730 vs. NCBI nr
Match: XP_022925875.1 (uncharacterized protein LOC111433155 [Cucurbita moschata] >KAG6604366.1 hypothetical protein SDJN03_04975, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297.0 bits (759), Expect = 1.0e-76
Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL 60
           MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL
Sbjct: 1   MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL 60

Query: 61  GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA 120
           GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA
Sbjct: 61  GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA 120

Query: 121 LDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNNPS 166
           LDAFNEKNNEKV CISKLMEMVGESERVRLKRLEELSKHVDNN S
Sbjct: 121 LDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS 165

[Close]

BLAST of CmaCh03G011730 vs. NCBI nr
Match: XP_023517191.1 (uncharacterized protein KIAA1211-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.9 bits (642), Expect = 3.8e-63
Identity = 142/163 (87.12%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 2   QNEQNP--QQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQAR 61
           Q EQNP  QQLQ+MLQNSGN SFSSK+DEEMSKSALSAFREKEEEIERMRTE+QQKLQAR
Sbjct: 3   QAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQAR 62

Query: 62  LGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKD 121
           LGRVEEE+RRLASIREELE I  DP RKEIGQIRKRID +NKELKPLGQ CQK+EKEYKD
Sbjct: 63  LGRVEEENRRLASIREELEAI-ADPMRKEIGQIRKRIDAVNKELKPLGQTCQKREKEYKD 122

Query: 122 ALDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDN 163
           ALDAFNEKN+EKVQ +SKLMEMVGESER+RL+RLEELSKHVDN
Sbjct: 123 ALDAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDN 164

[Close]

BLAST of CmaCh03G011730 vs. NCBI nr
Match: XP_022972692.1 (uncharacterized protein KIAA1211-like [Cucurbita maxima])

HSP 1 Score: 251.1 bits (640), Expect = 6.5e-63
Identity = 142/163 (87.12%), Postives = 151/163 (92.64%), Query Frame = 0


Query: 2   QNEQNP--QQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQAR 61
           Q EQNP  QQLQ+MLQNSGN SFSSK+DEEMSKSALSAFREKEEEIERMR E+QQKLQAR
Sbjct: 3   QAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRAEVQQKLQAR 62

Query: 62  LGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKD 121
           LGRVEEE+RRLASIREELE I  DP RKEIGQIRKRID +NKELKPLGQ CQKKEKEYKD
Sbjct: 63  LGRVEEENRRLASIREELEAI-ADPMRKEIGQIRKRIDAVNKELKPLGQTCQKKEKEYKD 122

Query: 122 ALDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDN 163
           ALDAFNEKN+EKVQ +SKLMEMVGESER+RL+RLEELSKHVDN
Sbjct: 123 ALDAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDN 164

[Close]

BLAST of CmaCh03G011730 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 185.7 bits (470), Expect = 3.1e-47
Identity = 101/155 (65.16%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 11  QVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEES 70
           Q+  Q SG++SFS   SKEDEEMS++ALSAFR KEEEIE+ + E+++++QA+LGRVEEE+
Sbjct: 23  QLGAQLSGSMSFSSQMSKEDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEET 82

Query: 71  RRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDALDAFNEK 130
           +RLA IREELEG+  DP RKE+  +RK+ID++NKELKPLG   QKKE+EYK+AL+AFNEK
Sbjct: 83  KRLALIREELEGL-ADPMRKEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEK 142

Query: 131 NNEKVQCISKLMEMVGESERVRLKRLEELSKHVDN 163
           N EKVQ I++LME+VGESE++R+K+LEELSK++D+
Sbjct: 143 NREKVQLITRLMELVGESEKMRMKKLEELSKNIDS 176

[Close]

BLAST of CmaCh03G011730 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 176.8 bits (447), Expect = 1.4e-44
Identity = 98/160 (61.25%), Postives = 134/160 (83.75%), Query Frame = 0


Query: 5   QNPQQLQVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLG 64
           Q  QQ   M+ ++G+LSFS   S+EDEEM++SALSAFR KE+EIE+ R E+++++QA+LG
Sbjct: 32  QPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLG 91

Query: 65  RVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDAL 124
           RVE+E++RL++IREELE +  DP RKE+  +RK+ID++NKELKPLG   QKKE+EYK+AL
Sbjct: 92  RVEQETKRLSTIREELESM-ADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYKEAL 151

Query: 125 DAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVD 162
           D FNEKN EKVQ I+KLME+VGESE++R+ +LEELSK ++
Sbjct: 152 DTFNEKNREKVQLITKLMELVGESEKLRMIKLEELSKSIE 190

[Close]

BLAST of CmaCh03G011730 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) )

HSP 1 Score: 176.4 bits (446), Expect = 1.9e-44
Identity = 102/162 (62.96%), Postives = 133/162 (82.10%), Query Frame = 0


Query: 3   NEQNPQQLQVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQAR 62
           NE   Q  Q M+    +LSFS   SKEDEEM++SALSAFR KE+EIE+ + E++++++A+
Sbjct: 5   NEATTQPPQQMM----SLSFSSQMSKEDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQ 64

Query: 63  LGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKD 122
           LGRVEEE+RRLASIREELE +  DP RKE+  +RK+ID++NKELKPLG   QKKE+EYK+
Sbjct: 65  LGRVEEETRRLASIREELETM-ADPMRKEVNWVRKKIDSVNKELKPLGSTVQKKEREYKE 124

Query: 123 ALDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVD 162
           ALD FNEKN EKVQ I+KLME+VGESE++RLK+L+ELS+ +D
Sbjct: 125 ALDTFNEKNREKVQLITKLMELVGESEKLRLKKLDELSRSID 161

[Close]

BLAST of CmaCh03G011730 vs. TAIR 10
Match: AT2G36410.3 (Family of unknown function (DUF662) )

HSP 1 Score: 172.9 bits (437), Expect = 2.1e-43
Identity = 97/160 (60.62%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 5   QNPQQLQVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLG 64
           Q  QQ   M+ ++G+LSFS   S+EDEEM++SALSAFR KE+EIE+ R E+++++QA+LG
Sbjct: 32  QPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLG 91

Query: 65  RVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDAL 124
           RVE+E++RL++IREELE +  DP RKE+  +RK+ID++NKELKPLG   QKK  EYK+AL
Sbjct: 92  RVEQETKRLSTIREELESM-ADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKVMEYKEAL 151

Query: 125 DAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVD 162
           D FNEKN EKVQ I+KLME+VGESE++R+ +LEELSK ++
Sbjct: 152 DTFNEKNREKVQLITKLMELVGESEKLRMIKLEELSKSIE 190

[Close]

BLAST of CmaCh03G011730 vs. TAIR 10
Match: AT2G36410.1 (Family of unknown function (DUF662) )

HSP 1 Score: 172.6 bits (436), Expect = 2.7e-43
Identity = 99/163 (60.74%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 5   QNPQQLQVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLG 64
           Q  QQ   M+ ++G+LSFS   S+EDEEM++SALSAFR KE+EIE+ R E+++++QA+LG
Sbjct: 32  QPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLG 91

Query: 65  RVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDAL 124
           RVE+E++RL++IREELE +  DP RKE+  +RK+ID++NKELKPLG   QKKE+EYK+AL
Sbjct: 92  RVEQETKRLSTIREELESM-ADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYKEAL 151

Query: 125 DAFNEKNNEKVQCISKLMEM---VGESERVRLKRLEELSKHVD 162
           D FNEKN EKVQ I+KLMEM   VGESE++R+ +LEELSK ++
Sbjct: 152 DTFNEKNREKVQLITKLMEMEQLVGESEKLRMIKLEELSKSIE 193

The following BLAST results are available for this feature:

BLAST of CmaCh03G011730 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G011730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IS07	9.0e-79	100.00	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111478791 PE=3 SV=1	[more]
A0A6J1EJF7	5.0e-77	98.79	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111433155 PE=3 SV=1	[more]
A0A6J1I5J6	3.1e-63	87.12	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111471218 PE=3 SV=1	[more]
A0A1S3CIS0	3.1e-63	84.66	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500877 PE=3 SV=1	[more]
A0A6J1HDL2	5.3e-63	86.50	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111463194 PE=3 SV=1	[more]

BLAST of CmaCh03G011730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022979025.1	1.9e-78	100.00	uncharacterized protein LOC111478791 [Cucurbita maxima]	[more]
XP_023543803.1	1.6e-77	99.39	uncharacterized protein LOC111803564 [Cucurbita pepo subsp. pepo] >KAG7034517.1 ...	[more]
XP_022925875.1	1.0e-76	98.79	uncharacterized protein LOC111433155 [Cucurbita moschata] >KAG6604366.1 hypothet...	[more]
XP_023517191.1	3.8e-63	87.12	uncharacterized protein KIAA1211-like [Cucurbita pepo subsp. pepo]	[more]
XP_022972692.1	6.5e-63	87.12	uncharacterized protein KIAA1211-like [Cucurbita maxima]	[more]

BLAST of CmaCh03G011730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09980.1	3.1e-47	65.16	Family of unknown function (DUF662)	[more]
AT2G36410.2	1.4e-44	61.25	Family of unknown function (DUF662)	[more]
AT3G52920.2	1.9e-44	62.96	Family of unknown function (DUF662)	[more]
AT2G36410.3	2.1e-43	60.63	Family of unknown function (DUF662)	[more]
AT2G36410.1	2.7e-43	60.74	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 63..83
None	No IPR available	COILS	Coil	Coil	coord: 110..130
None	No IPR available	COILS	Coil	Coil	coord: 31..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR21470:SF10	ANKYRIN REPEAT 30A-LIKE PROTEIN (DUF662)	coord: 1..162
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 13..161 e-value: 7.3E-63 score: 211.1
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 1..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G011730.1	CmaCh03G011730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus