CmaCh03G011410 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G011410
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Casparian strip membrane protein 1
Location	Cma_Chr03: 7714350 .. 7715504 (-)
RNA-Seq Expression	CmaCh03G011410
Synteny	CmaCh03G011410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGGTTTAAACAACAACTCCCCTTCACTTTATCTGCTCCAACAACCGATCAAACCCAATTTCCTCTCTTTATTTAGCTCCCAACTCTCTTCAACATTCCCATCACTCACAATTTGCTCCCATTCTTCTCCATTAAGAACAGCGAATCCTCGCAATTTTCCTTCTCCGATCACCCAAAAATGAAGAACGCCGAATCCTCTGCCATCAATGTTGCCTCCGAGACCACCAACAGCGGCCCAATTGGAAAGAAGAAGAGCACGACGCCGTTGCTAGCGGCGGAGGTGCCAATCCGGCCAGACAGGGGAACCCACCGGATGAAACGTGGGCTTGCAATTTTCGACATCGTTCTGAGAATCGGCGCCCTTTCCTCGGCGCTGGCGGCGGCAGCCACCATGGGAACCAGTGGGCAAACGTTGCCGTTTTTCACTCAGTTCTTCCAGTTCGAGGCTAGCTACGATGATTTGCCCACTTTCCAGTTGGGTGGTTTTCATTTTTAAGAAAAAATACTCTTCTTACTGCGATTGAATTACTTAAACAAATAATTGATTTGCAGGTTTTTTGTGATCGTAATGGGAATCGTTGCGGGATATGTGGTTCTGTCAATTCCATTCTCAATTGTTTGCATTATTCGTCCCCATGCTGCTGGGCCTCGCCTTCTCCTCTTGATTTTGGACTCTGTAAGCATTCACATAAAACTCCATAGTTAGAAATCGTTCACTTTAATGCTTTGGACTTTCTCAAAATACCTCATACAATCTCAAATAACTGTTAGTAACCATGACTTTATCGATAATAGCATAATATTGTCAATTGTGAACCTAAGTTTTTTGCATTGTGCTTCTCATTCTCCAAATTAATAATTTCATCGTGCATGTTGTGGTTTGCAGGTGGCTTTGGCATTGAGCACAGCGGCAGCAGGAGCGGCAGCGGCAGTGGTGGCGCTTGCACACAGTGGGAACTCAAGCACAAACTGGCTGGCAGTGTGCAACCAATTTGGGGACTTCTGCCAACAAGCGAGTGGGGCTGTGGTGGGCTCTTTTGCTGCTGTTTTGCTCTTCCTTCTACTCATCTTGTTCTCTGCCTTGTCCCTCAAGAATGCCCATTGATATCATTTCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT

mRNA sequence

AGAAGGTTTAAACAACAACTCCCCTTCACTTTATCTGCTCCAACAACCGATCAAACCCAATTTCCTCTCTTTATTTAGCTCCCAACTCTCTTCAACATTCCCATCACTCACAATTTGCTCCCATTCTTCTCCATTAAGAACAGCGAATCCTCGCAATTTTCCTTCTCCGATCACCCAAAAATGAAGAACGCCGAATCCTCTGCCATCAATGTTGCCTCCGAGACCACCAACAGCGGCCCAATTGGAAAGAAGAAGAGCACGACGCCGTTGCTAGCGGCGGAGGTGCCAATCCGGCCAGACAGGGGAACCCACCGGATGAAACGTGGGCTTGCAATTTTCGACATCGTTCTGAGAATCGGCGCCCTTTCCTCGGCGCTGGCGGCGGCAGCCACCATGGGAACCAGTGGGCAAACGTTGCCGTTTTTCACTCAGTTCTTCCAGTTCGAGGCTAGCTACGATGATTTGCCCACTTTCCAGTTTTTTGTGATCGTAATGGGAATCGTTGCGGGATATGTGGTTCTGTCAATTCCATTCTCAATTGTTTGCATTATTCGTCCCCATGCTGCTGGGCCTCGCCTTCTCCTCTTGATTTTGGACTCTGTGGCTTTGGCATTGAGCACAGCGGCAGCAGGAGCGGCAGCGGCAGTGGTGGCGCTTGCACACAGTGGGAACTCAAGCACAAACTGGCTGGCAGTGTGCAACCAATTTGGGGACTTCTGCCAACAAGCGAGTGGGGCTGTGGTGGGCTCTTTTGCTGCTGTTTTGCTCTTCCTTCTACTCATCTTGTTCTCTGCCTTGTCCCTCAAGAATGCCCATTGATATCATTTCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT

Coding sequence (CDS)

ATGAAGAACGCCGAATCCTCTGCCATCAATGTTGCCTCCGAGACCACCAACAGCGGCCCAATTGGAAAGAAGAAGAGCACGACGCCGTTGCTAGCGGCGGAGGTGCCAATCCGGCCAGACAGGGGAACCCACCGGATGAAACGTGGGCTTGCAATTTTCGACATCGTTCTGAGAATCGGCGCCCTTTCCTCGGCGCTGGCGGCGGCAGCCACCATGGGAACCAGTGGGCAAACGTTGCCGTTTTTCACTCAGTTCTTCCAGTTCGAGGCTAGCTACGATGATTTGCCCACTTTCCAGTTTTTTGTGATCGTAATGGGAATCGTTGCGGGATATGTGGTTCTGTCAATTCCATTCTCAATTGTTTGCATTATTCGTCCCCATGCTGCTGGGCCTCGCCTTCTCCTCTTGATTTTGGACTCTGTGGCTTTGGCATTGAGCACAGCGGCAGCAGGAGCGGCAGCGGCAGTGGTGGCGCTTGCACACAGTGGGAACTCAAGCACAAACTGGCTGGCAGTGTGCAACCAATTTGGGGACTTCTGCCAACAAGCGAGTGGGGCTGTGGTGGGCTCTTTTGCTGCTGTTTTGCTCTTCCTTCTACTCATCTTGTTCTCTGCCTTGTCCCTCAAGAATGCCCATTGA

Protein sequence

MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIGALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSIVCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLLILFSALSLKNAH

Homology

[Close]

BLAST of CmaCh03G011410 vs. ExPASy Swiss-Prot
Match: P0DI61 (Casparian strip membrane protein 1 OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.8e-92
Identity = 186/212 (87.74%), Postives = 197/212 (92.92%), Query Frame = 0


Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MK  ES+AI++A ET NSGPIGKKKSTTPLLAA V   PDRGTHRMKRGLAIFD VLRIG
Sbjct: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPV---PDRGTHRMKRGLAIFDFVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120
            L+SALAAAA MGTS QTLPFFTQFFQFEASYDDLPTFQFFV+ M +VAGYVVLSIPFSI
Sbjct: 61  VLASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSI 120

Query: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
           VCIIRPHAAGPR+LLLILDSVAL L+TAAAGAAAAVV+LAHSGNSSTNWLA+CNQFGDFC
Sbjct: 121 VCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 213
           QQASGAVVGSFAAVLLFLLLILFSALSLKN+H
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNSH 209

[Close]

BLAST of CmaCh03G011410 vs. ExPASy Swiss-Prot
Match: B9IIR5 (Casparian strip membrane protein 2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_576556 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.3e-60
Identity = 126/185 (68.11%), Postives = 156/185 (84.32%), Query Frame = 0


Query: 25  KSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIGALSSALAAAATMGTSGQTLPFFTQ 84
           K T PL+AA  P++   G    K+G+AIFD +LR+ A+++ALAAAA+MGTS +TLPFFTQ
Sbjct: 18  KGTAPLIAA--PMKEKGG---YKKGIAIFDFILRLAAIATALAAAASMGTSDETLPFFTQ 77

Query: 85  FFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSIVCIIRPHAAGPRLLLLILDSVALA 144
           FFQF+ASYDDLPTFQFFVI M IVAGY+VLS+PFSIV I+RPHAAGPRLLL+ILD+VAL 
Sbjct: 78  FFQFQASYDDLPTFQFFVIAMAIVAGYLVLSLPFSIVAIVRPHAAGPRLLLIILDTVALT 137

Query: 145 LSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLLILFS 204
           L+TAA  AAAA+V LAH+GNSSTNWLA+C QFGDFCQ+ SGAVV SF  V++F+ L++ S
Sbjct: 138 LNTAAGAAAAAIVYLAHNGNSSTNWLAICQQFGDFCQKNSGAVVASFITVVIFVFLLVLS 197

Query: 205 ALSLK 210
           A +L+
Sbjct: 198 AFALR 197

[Close]

BLAST of CmaCh03G011410 vs. ExPASy Swiss-Prot
Match: B9IIR4 (Casparian strip membrane protein 3 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_907513 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 7.5e-59
Identity = 129/204 (63.24%), Postives = 161/204 (78.92%), Query Frame = 0


Query: 6   SSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIGALSSA 65
           S+ +++ ++T+ +      K T PL+AA   ++        K+GLAIFD+VLR+GA+ +A
Sbjct: 2   SARVDIPADTSAAA-----KGTAPLIAASTHVKGG-----YKKGLAIFDLVLRLGAVVTA 61

Query: 66  LAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSIVCIIR 125
           LAAAATMGT+ QTLPFFTQFFQF+ASYDDLPTFQFFVI M IV+GY+VLS+PFSIV IIR
Sbjct: 62  LAAAATMGTTDQTLPFFTQFFQFQASYDDLPTFQFFVIAMAIVSGYLVLSLPFSIVAIIR 121

Query: 126 PHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQASG 185
           PHA GPRLLL+ILD+VAL L+TAAA AA A+V LA +GNSS NWL +C QFGDFCQ+ASG
Sbjct: 122 PHATGPRLLLIILDTVALTLNTAAAAAAVAIVDLAQNGNSSANWLGICQQFGDFCQKASG 181

Query: 186 AVVGSFAAVLLFLLLILFSALSLK 210
           AVV SF A  + L LI+ SAL+L+
Sbjct: 182 AVVASFIAAGVLLFLIVISALALR 195

[Close]

BLAST of CmaCh03G011410 vs. ExPASy Swiss-Prot
Match: B9SX12 (Casparian strip membrane protein 1 OS=Ricinus communis OX=3988 GN=RCOM_1259250 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-58
Identity = 129/204 (63.24%), Postives = 159/204 (77.94%), Query Frame = 0


Query: 6   SSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIGALSSA 65
           S+ I + +E   S  + K K+  PL+ A       +G +  K+G+AIFD +LR+GA+ SA
Sbjct: 2   STTIEIPAE---SSAVAKGKA--PLIGASSSSYEKKGGY--KKGIAIFDFILRLGAVISA 61

Query: 66  LAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSIVCIIR 125
           L+AAATMGTS +TLPFFTQFFQFEA YDD PTFQFFVI MG V GY+VLS+PFS+V IIR
Sbjct: 62  LSAAATMGTSDETLPFFTQFFQFEAGYDDFPTFQFFVIAMGFVGGYLVLSLPFSVVAIIR 121

Query: 126 PHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQASG 185
           PHA G RLLLLILD+VAL L+TAAA AAAA+V LAH+GN S NWLAVC QFGDFCQ+ SG
Sbjct: 122 PHAVGIRLLLLILDTVALTLNTAAAAAAAAIVYLAHNGNQSANWLAVCQQFGDFCQKVSG 181

Query: 186 AVVGSFAAVLLFLLLILFSALSLK 210
            VV SF +VL+FLLL++ SA++L+
Sbjct: 182 GVVASFVSVLVFLLLVVMSAVALR 198

[Close]

BLAST of CmaCh03G011410 vs. ExPASy Swiss-Prot
Match: B9HBX2 (Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_763057 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.1e-57
Identity = 124/206 (60.19%), Postives = 163/206 (79.13%), Query Frame = 0


Query: 4   AESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIGALS 63
           +ES+AI++   ++ +      K   PL+A     R ++G +R  +G+AIFD +LR+ A++
Sbjct: 3   SESAAIDIPESSSVA------KGKAPLIAVS---RNEKGGYR--KGIAIFDFILRLAAIA 62

Query: 64  SALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSIVCI 123
           +ALAAAA MGTS +TLPFFTQFFQF+ASYDDLPTFQFFVI + IV GY+VLS+PFSIV I
Sbjct: 63  TALAAAAAMGTSDETLPFFTQFFQFQASYDDLPTFQFFVIAIAIVGGYLVLSLPFSIVAI 122

Query: 124 IRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQA 183
           +RPHA GPRLLL+ILD+VAL L+TAA  AAAA+V LAH+GNS+TNWLA+C Q+GDFCQ+ 
Sbjct: 123 VRPHAVGPRLLLIILDAVALTLNTAAGAAAAAIVYLAHNGNSNTNWLAICQQYGDFCQKV 182

Query: 184 SGAVVGSFAAVLLFLLLILFSALSLK 210
           SGAVV SF  V++F+ LI+ SA +L+
Sbjct: 183 SGAVVASFITVVIFVFLIVLSAFALR 197

[Close]

BLAST of CmaCh03G011410 vs. ExPASy TrEMBL
Match: A0A6J1IL91 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478054 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.4e-103
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG
Sbjct: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120
           ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI
Sbjct: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120

Query: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
           VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC
Sbjct: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 213
           QQASGAVVGSFAAVLLFLLLILFSALSLKNAH
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 212

[Close]

BLAST of CmaCh03G011410 vs. ExPASy TrEMBL
Match: A0A6J1EEC6 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433348 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.0e-102
Identity = 210/212 (99.06%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MKNAESSAINVASETTNSG IGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG
Sbjct: 1   MKNAESSAINVASETTNSGSIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120
           ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLS+PFSI
Sbjct: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSLPFSI 120

Query: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
           VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC
Sbjct: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 213
           QQASGAVVGSFAAVLLFLLLILFSALSLKNAH
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 212

[Close]

BLAST of CmaCh03G011410 vs. ExPASy TrEMBL
Match: A0A0A0KKJ8 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G453800 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.7e-90
Identity = 186/212 (87.74%), Postives = 199/212 (93.87%), Query Frame = 0


Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MK  ES++I++A ET NSGPIGKKKSTTPLLAA VP+  DRGTHRMKRGL+IFD VLRIG
Sbjct: 1   MKTGESTSIDIAPETNNSGPIGKKKSTTPLLAAPVPV-TDRGTHRMKRGLSIFDFVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120
            L+SALAAAATMGTS QTLPFFTQFFQFEASYDDLPTFQFFV+ M +VAGYVVLSIPFSI
Sbjct: 61  VLASALAAAATMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSI 120

Query: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
           VCIIRPHAAGPR+LLLILDSVAL L+TAAAGAAAAVV+LAHSGNSSTNWLAVCNQFGDFC
Sbjct: 121 VCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAVCNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 213
           QQASGAVVGSFAAVLLFLLLILFSALSLKN+H
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNSH 211

[Close]

BLAST of CmaCh03G011410 vs. ExPASy TrEMBL
Match: A0A6J1BV79 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111005840 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.9e-90
Identity = 184/209 (88.04%), Postives = 197/209 (94.26%), Query Frame = 0


Query: 2   KNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIGA 61
           KN+ES+AI+VA E  NSGPIGKKKSTTPLLAA VP+R DRGTHRMKRGLAIFD VLRIGA
Sbjct: 3   KNSESTAIDVAPENPNSGPIGKKKSTTPLLAAPVPVRQDRGTHRMKRGLAIFDFVLRIGA 62

Query: 62  LSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSIV 121
           L++ALAAAA MGTS +TLPFFTQFFQFEASYDDLPTFQFFVI MGIVAGYVVLSIPFSIV
Sbjct: 63  LAAALAAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFVIAMGIVAGYVVLSIPFSIV 122

Query: 122 CIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQ 181
           CI+RPHA GPRLLLLILDSVAL L+T AAGAAAAVV+LAHSGNSSTNWLA+CNQFGDFCQ
Sbjct: 123 CIVRPHAVGPRLLLLILDSVALTLTTVAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQ 182

Query: 182 QASGAVVGSFAAVLLFLLLILFSALSLKN 211
           QASGAV+GSFAAVLLFLLLILFSALSLK+
Sbjct: 183 QASGAVIGSFAAVLLFLLLILFSALSLKH 211

[Close]

BLAST of CmaCh03G011410 vs. ExPASy TrEMBL
Match: A0A5A7SKE2 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00860 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 6.6e-90
Identity = 186/212 (87.74%), Postives = 197/212 (92.92%), Query Frame = 0


Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MK  ES+AI++A ET NSGPIGKKKSTTPLLAA V   PDRGTHRMKRGLAIFD VLRIG
Sbjct: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPV---PDRGTHRMKRGLAIFDFVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120
            L+SALAAAA MGTS QTLPFFTQFFQFEASYDDLPTFQFFV+ M +VAGYVVLSIPFSI
Sbjct: 61  VLASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSI 120

Query: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
           VCIIRPHAAGPR+LLLILDSVAL L+TAAAGAAAAVV+LAHSGNSSTNWLA+CNQFGDFC
Sbjct: 121 VCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 213
           QQASGAVVGSFAAVLLFLLLILFSALSLKN+H
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNSH 209

[Close]

BLAST of CmaCh03G011410 vs. NCBI nr
Match: XP_022977901.1 (casparian strip membrane protein 1 [Cucurbita maxima])

HSP 1 Score: 385.6 bits (989), Expect = 2.8e-103
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG
Sbjct: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120
           ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI
Sbjct: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120

Query: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
           VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC
Sbjct: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 213
           QQASGAVVGSFAAVLLFLLLILFSALSLKNAH
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 212

[Close]

BLAST of CmaCh03G011410 vs. NCBI nr
Match: XP_023544952.1 (casparian strip membrane protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.8 bits (987), Expect = 4.8e-103
Identity = 211/212 (99.53%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG
Sbjct: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120
           ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLS+PFSI
Sbjct: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSLPFSI 120

Query: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
           VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC
Sbjct: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 213
           QQASGAVVGSFAAVLLFLLLILFSALSLKNAH
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 212

[Close]

BLAST of CmaCh03G011410 vs. NCBI nr
Match: KAG6604335.1 (hypothetical protein SDJN03_04944, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 383.3 bits (983), Expect = 1.4e-102
Identity = 210/212 (99.06%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG
Sbjct: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120
           ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLS+PFSI
Sbjct: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSLPFSI 120

Query: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
           VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC
Sbjct: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 213
           QQASGAVVGSFAAVLLFLLLILFSALSLKN H
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNGH 212

[Close]

BLAST of CmaCh03G011410 vs. NCBI nr
Match: KAG7034486.1 (hypothetical protein SDJN02_04216, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 382.9 bits (982), Expect = 1.8e-102
Identity = 210/212 (99.06%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG
Sbjct: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120
           ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLS+PFSI
Sbjct: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSLPFSI 120

Query: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
           VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC
Sbjct: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 213
           QQASGAVVGSFAAVLLFLLLILFSALSLK+AH
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKSAH 212

[Close]

BLAST of CmaCh03G011410 vs. NCBI nr
Match: XP_022926164.1 (casparian strip membrane protein 1-like [Cucurbita moschata])

HSP 1 Score: 381.7 bits (979), Expect = 4.1e-102
Identity = 210/212 (99.06%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MKNAESSAINVASETTNSG IGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG
Sbjct: 1   MKNAESSAINVASETTNSGSIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120
           ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLS+PFSI
Sbjct: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSLPFSI 120

Query: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
           VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC
Sbjct: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 213
           QQASGAVVGSFAAVLLFLLLILFSALSLKNAH
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 212

[Close]

BLAST of CmaCh03G011410 vs. TAIR 10
Match: AT5G06200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 215.3 bits (547), Expect = 4.7e-56
Identity = 122/206 (59.22%), Postives = 157/206 (76.21%), Query Frame = 0


Query: 4   AESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIGALS 63
           ++S A++V +E+++       K   PLL      R   G+   KRGL+IFD +LR+ A+ 
Sbjct: 3   SDSIAVDVPAESSS-----VIKGKAPLLGL---ARDHTGSGGYKRGLSIFDFLLRLAAIV 62

Query: 64  SALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSIVCI 123
           +ALAAAATMGTS +TLPFFTQF QFEASYDDLPTFQFFV+ + IVAGY+VLS+PFS+V I
Sbjct: 63  AALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTI 122

Query: 124 IRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQA 183
           +RP A  PRLLLL+LD+ ALAL TAAA AAAA+V LAH+GN++TNWL +C QFGDFCQ+ 
Sbjct: 123 VRPLAVAPRLLLLVLDTAALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKT 182

Query: 184 SGAVVGSFAAVLLFLLLILFSALSLK 210
           SGAVV +FA+V    +L++ S +SLK
Sbjct: 183 SGAVVSAFASVTFLAILVVISGVSLK 200

[Close]

BLAST of CmaCh03G011410 vs. TAIR 10
Match: AT3G11550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 207.6 bits (527), Expect = 9.8e-54
Identity = 120/209 (57.42%), Postives = 156/209 (74.64%), Query Frame = 0


Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MKN ES+ I+V +E++++      K   PL+          G+    RGLAIFD +LR+ 
Sbjct: 1   MKN-ESTFIDVPAESSSA-----MKGKAPLIGV-ARDHTTSGSGGYNRGLAIFDFLLRLA 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120
           A+ +ALAAAATMGTS +TLPFFTQF QFEASYDDLPTFQFFVI M +V GY+VLS+P S+
Sbjct: 61  AIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVIAMALVGGYLVLSLPISV 120

Query: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
           V I+RP A  PRLLLL+LD+  LAL+TAAA +AAA+  LAHSGN +TNWL +C QFGDFC
Sbjct: 121 VTILRPLATAPRLLLLVLDTGVLALNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLK 210
           Q++SGAVV +F +V+ F +L++ S ++LK
Sbjct: 181 QKSSGAVVSAFVSVVFFTILVVISGVALK 202

[Close]

BLAST of CmaCh03G011410 vs. TAIR 10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 188.7 bits (478), Expect = 4.7e-48
Identity = 97/163 (59.51%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 47  KRGLAIFDIVLRIGALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMG 106
           KRGLAIFD +LR+ A++  + AA+ M T+ +TLPFFTQF QF+A YDDLP FQ+FVI + 
Sbjct: 42  KRGLAIFDFLLRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIAVA 101

Query: 107 IVAGYVVLSIPFSIVCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSS 166
           +VA Y+VLS+PFSIV I+RPHA  PRL+LLI D++ + L+T+AA AAA++  LAH+GN S
Sbjct: 102 VVASYLVLSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQS 161

Query: 167 TNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLLILFSALSLK 210
           TNWL +C QFGDFCQ  S AVV    A+L F++LI+ SA++LK
Sbjct: 162 TNWLPICQQFGDFCQNVSTAVVADSIAILFFIVLIIISAIALK 204

[Close]

BLAST of CmaCh03G011410 vs. TAIR 10
Match: AT2G27370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 181.8 bits (460), Expect = 5.8e-46
Identity = 100/163 (61.35%), Postives = 123/163 (75.46%), Query Frame = 0


Query: 47  KRGLAIFDIVLRIGALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMG 106
           KRG+AIFD VLR+ A  +A+AAAA M T+ +TLPFFTQF QF+A Y DLPT   FVIV  
Sbjct: 56  KRGVAIFDFVLRLIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPTMSSFVIVNS 115

Query: 107 IVAGYVVLSIPFSIVCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSS 166
           IV GY+ LS+PFSIVCI+RP A  PRL L++ D+V + L+  AA A+AA+V LAH+GNSS
Sbjct: 116 IVGGYLTLSLPFSIVCILRPLAVPPRLFLILCDTVMMGLTLMAASASAAIVYLAHNGNSS 175

Query: 167 TNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLLILFSALSLK 210
           +NWL VC QFGDFCQ  SGAVV SF A  L + L++ SA +LK
Sbjct: 176 SNWLPVCQQFGDFCQGTSGAVVASFIAATLLMFLVILSAFALK 218

[Close]

BLAST of CmaCh03G011410 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 153.7 bits (387), Expect = 1.7e-37
Identity = 79/167 (47.31%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 46  MKRGLAIFDIVLRIGALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVM 105
           M R +AI + +LRI A  + + +A  MGT+ +TLPFFTQF +F+A Y+DLP   FFV+  
Sbjct: 21  MSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVAN 80

Query: 106 GIVAGYVVLSIPFSIVCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNS 165
            +V+GY++LS+  + V I++      R+LL+ILD   L L T+ A +AAA+V LAH+GN+
Sbjct: 81  AVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNGNN 140

Query: 166 STNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLLILFSALSLKNAH 213
            TNW A+C QF  FC++ SG+++GSF A++L +LLIL SA++L   H
Sbjct: 141 KTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSRRH 187

The following BLAST results are available for this feature:

BLAST of CmaCh03G011410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DI61	1.8e-92	87.74	Casparian strip membrane protein 1 OS=Cucumis melo OX=3656 PE=2 SV=1	[more]
B9IIR5	2.3e-60	68.11	Casparian strip membrane protein 2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_...	[more]
B9IIR4	7.5e-59	63.24	Casparian strip membrane protein 3 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_...	[more]
B9SX12	1.7e-58	63.24	Casparian strip membrane protein 1 OS=Ricinus communis OX=3988 GN=RCOM_1259250 P...	[more]
B9HBX2	1.1e-57	60.19	Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_...	[more]

BLAST of CmaCh03G011410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IL91	1.4e-103	100.00	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478054 PE=3 SV=1	[more]
A0A6J1EEC6	2.0e-102	99.06	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433348 PE=3 SV=1	[more]
A0A0A0KKJ8	1.7e-90	87.74	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G453800 PE=3 SV=1	[more]
A0A6J1BV79	2.9e-90	88.04	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111005840 PE=3 SV=1	[more]
A0A5A7SKE2	6.6e-90	87.74	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00...	[more]

BLAST of CmaCh03G011410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977901.1	2.8e-103	100.00	casparian strip membrane protein 1 [Cucurbita maxima]	[more]
XP_023544952.1	4.8e-103	99.53	casparian strip membrane protein 1 [Cucurbita pepo subsp. pepo]	[more]
KAG6604335.1	1.4e-102	99.06	hypothetical protein SDJN03_04944, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7034486.1	1.8e-102	99.06	hypothetical protein SDJN02_04216, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022926164.1	4.1e-102	99.06	casparian strip membrane protein 1-like [Cucurbita moschata]	[more]

BLAST of CmaCh03G011410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06200.1	4.7e-56	59.22	Uncharacterised protein family (UPF0497)	[more]
AT3G11550.1	9.8e-54	57.42	Uncharacterised protein family (UPF0497)	[more]
AT2G36100.1	4.7e-48	59.51	Uncharacterised protein family (UPF0497)	[more]
AT2G27370.1	5.8e-46	61.35	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	1.7e-37	47.31	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 55..207 e-value: 1.6E-40 score: 136.4
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 48..196 e-value: 1.7E-44 score: 151.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 19..210
None	No IPR available	PANTHER	PTHR11615:SF281	CASPARIAN STRIP MEMBRANE PROTEIN 3	coord: 19..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G011410.1	CmaCh03G011410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007043	cell-cell junction assembly
biological_process	GO:0042545	cell wall modification
cellular_component	GO:0048226	Casparian strip
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding