CmaCh03G010040 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G010040
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	cyclin-H1-1-like
Location	Cma_Chr03: 7047238 .. 7048593 (-)
RNA-Seq Expression	CmaCh03G010040
Synteny	CmaCh03G010040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAGTATTTTACGATAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGTATTCAGATAAGATAAGCTGATTGAATGACCCATATCTCTTTCGCTTAAAGATTGTTATGTATTTTAAATATCGAAATTGTTGTTTATATGAATCCTTCTTTTATGTTTTTCCTCATTTTTGTTGACTCTTTTCAGGCAACAGCTCTTATATATTTTAAAATATTCTATCTACAATGGTCTGTGATGCAACATAATCCCAAATATGTGATGTAAGAGTTTAGATGTATATCTGCTTTATATGCTTAAAGCTTCCCCTTATTTATTGTGATACAATAATTTGACTTTGCTAAAAATCATTTTGAGGTATGAATGTGGTTGAAATGCTTAGCTCCAGAGAAATTGCTTGGACGTGGGATGTACTTTTGATATTACACTCATCTTAGGAAGTTTTGCTCCCTACAACTTCTTTCACTCTCACTGTCGCTATTATTATCATATGAGCCATAGAGTAGTTTCTGGATGTAGCTAACTGTCTCCTTCACAGGTTAACCTGCATTTATGCAGCTTGTAAGATCGAAGAAAATCACGTCTCAGCTGAGGAGCTTGGTAAGGGAATTTCACAGGATCATCAAATTATTCTCAATTATGAGATGATAGTATATTAGGCATGGATTGCTACATGACTTGTTTTTATCATGTTCACTTCATTTATTTTTGCCGTGTTTTCTTTTCCCCTCTTCTCTTATTTATTTTTCTGCTGTTCTACTGTCTGGAATTTGGTCTTATTGTTTATGCACCTTACCGATCAGTTAAAGGCTACGTAAACGACATGGAGGTAAATGTAGTCTTTTTATTTTTTCTTTTTTTAAAATGTGGATTCTCCAGGCGATGCTTAAACTTGATTCGTCTGTTTTTTTCCTGGGCATTCTTTACCTTCTTATAAAGTTGGTTACAATTTTTCCTTCTCTTTCATTGATGTTGCACTTGGTGATAAATGGTGCATATTTTCAGAAACTATTCCATGAGAACACTGAAATGCTTCAAATGCTGAAGGTAATTGTTTCATTGTTCAATGTAATAGATATACTGTTGTATGGGTATGTCCGGTCTTTCAGTTTTTACAGTAAACCTGTTGACCAATGCACTGATTTAATTGGTGAAATTTCTTTCCATGGAGGCACAGATAACTCTAGTCTATTTGCTGCTAATTTCAATGTGAAGTCAGAATTATTTGCTGCTTTTTTCTGAGCATTATTACAATCAGTCAATGAGATCAAAGAAACCTGTGCATGTGTTGACAAGAAATAAATGCATTGATCAGACATATAAAACAAGGGGCAGCTAG

mRNA sequence

ATGCGAGTATTTTACGATAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACAGCTCTTATATATTTTAAAATATTCTATCTACAATGGTCTGTGATGCAACATAATCCCAAATATGTGATGTTAACCTGCATTTATGCAGCTTGTAAGATCGAAGAAAATCACGTCTCAGCTGAGGAGCTTGGCATGGATTGCTACATGACTTGTTTTTATCATGTTCACTTCATTTATTTTTGCCGTGTTTTCTTTTCCCCTCTTCTCTTATTTATTTTTCTGCTGTTCTACTGTCTGGAATTTGGTCTTATTGTTTATGCACCTTACCGATCAGTTAAAGGCTACGTAAACGACATGGAGAAACTATTCCATGAGAACACTGAAATGCTTCAAATGCTGAAGGTAATTGTTTCATTGTTCAATGTAATAGATATACTGTTGTATGGTCAGAATTATTTGCTGCTTTTTTCTGAGCATTATTACAATCAGTCAATGAGATCAAAGAAACCTGTGCATGTGTTGACAAGAAATAAATGCATTGATCAGACATATAAAACAAGGGGCAGCTAG

Coding sequence (CDS)

ATGCGAGTATTTTACGATAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACAGCTCTTATATATTTTAAAATATTCTATCTACAATGGTCTGTGATGCAACATAATCCCAAATATGTGATGTTAACCTGCATTTATGCAGCTTGTAAGATCGAAGAAAATCACGTCTCAGCTGAGGAGCTTGGCATGGATTGCTACATGACTTGTTTTTATCATGTTCACTTCATTTATTTTTGCCGTGTTTTCTTTTCCCCTCTTCTCTTATTTATTTTTCTGCTGTTCTACTGTCTGGAATTTGGTCTTATTGTTTATGCACCTTACCGATCAGTTAAAGGCTACGTAAACGACATGGAGAAACTATTCCATGAGAACACTGAAATGCTTCAAATGCTGAAGGTAATTGTTTCATTGTTCAATGTAATAGATATACTGTTGTATGGTCAGAATTATTTGCTGCTTTTTTCTGAGCATTATTACAATCAGTCAATGAGATCAAAGAAACCTGTGCATGTGTTGACAAGAAATAAATGCATTGATCAGACATATAAAACAAGGGGCAGCTAG

Protein sequence

MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEENHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGYVNDMEKLFHENTEMLQMLKVIVSLFNVIDILLYGQNYLLLFSEHYYNQSMRSKKPVHVLTRNKCIDQTYKTRGS

Homology

[Close]

BLAST of CmaCh03G010040 vs. ExPASy Swiss-Prot
Match: Q8W5S1 (Cyclin-H1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCH1-1 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.5e-33
Identity = 76/142 (53.52%), Postives = 97/142 (68.31%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           MR FY+ K+QEVC+ F FPHKIQATAL YFK FYLQWSVMQH+PK +MLTC+YAACKIEE
Sbjct: 79  MRAFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVMQHHPKEIMLTCVYAACKIEE 138

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           NHVSAEE+G           H I         +L +   +   LEF LIVYAPYR+++G+
Sbjct: 139 NHVSAEEIGKGINQD-----HRI---------ILKYEMAVLQSLEFDLIVYAPYRAIEGF 198

Query: 121 VNDMEKLFHENTEMLQMLKVIV 143
           VN+ME+      + +Q L+ ++
Sbjct: 199 VNNMEEFLQARDDEIQKLESLL 206

[Close]

BLAST of CmaCh03G010040 vs. ExPASy Swiss-Prot
Match: Q10D80 (Cyclin-H1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCH1-1 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-32
Identity = 73/125 (58.40%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           MRVFY+ K+QEVC+ F FPHKIQATA+IYFK FYLQWSVM+H+PK++MLTCIY++CK+EE
Sbjct: 79  MRVFYEQKIQEVCSAFKFPHKIQATAIIYFKRFYLQWSVMEHHPKHIMLTCIYSSCKVEE 138

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           NHVSAEELG           H I         +L    ++   L+F LIVYAPYRS++G+
Sbjct: 139 NHVSAEELGKGIQQD-----HQI---------ILNNEMIVLKSLDFDLIVYAPYRSIEGF 189

Query: 121 VNDME 126
           V+DME
Sbjct: 199 VDDME 189

[Close]

BLAST of CmaCh03G010040 vs. ExPASy Swiss-Prot
Match: P51947 (Cyclin-H OS=Xenopus laevis OX=8355 GN=ccnh PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-11
Identity = 46/137 (33.58%), Postives = 76/137 (55.47%), Query Frame = 0


Query: 4   FYDNKLQEVCNNFH--FPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEEN 63
           +Y+ +L + CN F    P  +  TA +YFK FYL  SVM+H+P+ +MLTC++ ACK++E 
Sbjct: 59  YYEKRLLDFCNAFKPTMPKSVLGTACMYFKRFYLNNSVMEHHPRIIMLTCVFLACKVDEF 118

Query: 64  HVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGYV 123
           +VS+ +   +           +         +L +  LL   L F LIV+ PYR  +G++
Sbjct: 119 NVSSIQFVGNLGENPLGQEKIL-------EQILEYELLLIQQLNFHLIVHNPYRPFEGFL 178

Query: 124 NDMEKLFH--ENTEMLQ 137
            D++  +   EN E+L+
Sbjct: 179 IDVKTRYPMLENPEVLR 188

[Close]

BLAST of CmaCh03G010040 vs. ExPASy Swiss-Prot
Match: Q55F19 (Putative cyclin-H OS=Dictyostelium discoideum OX=44689 GN=cycH PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.1e-11
Identity = 42/138 (30.43%), Postives = 70/138 (50.72%), Query Frame = 0


Query: 4   FYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEENHV 63
           +Y+ K  E+    + P K+ A A+IY K FYL+ S+MQ+  K VML+C++ ACK E+NH+
Sbjct: 57  YYETKTLEIAMALNLPDKVSAPAIIYIKRFYLKNSIMQYGAKLVMLSCLFIACKTEDNHL 116

Query: 64  SAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGYVND 123
             +              ++    +   S +     ++   L F LIVY P+R + GY+ D
Sbjct: 117 DID--------------YYSNITKASPSDITNLEIIILESLNFNLIVYHPFRPMYGYILD 176

Query: 124 M--EKLFHENTEMLQMLK 140
           +      + NT  +  +K
Sbjct: 177 INDNSAIYNNTNGVSPIK 180

[Close]

BLAST of CmaCh03G010040 vs. ExPASy Swiss-Prot
Match: Q3ZBL9 (Cyclin-H OS=Bos taurus OX=9913 GN=CCNH PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-10
Identity = 45/137 (32.85%), Postives = 76/137 (55.47%), Query Frame = 0


Query: 4   FYDNKLQEVCNNFH--FPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEEN 63
           +Y+ +L E C+ F    P  +  TA +YFK FYL  SVM+++P+ +MLTC + ACK++E 
Sbjct: 59  YYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEF 118

Query: 64  HVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGYV 123
           +VS+ +   +   +       +         +L +  LL   L F LIV+ PYR  +G++
Sbjct: 119 NVSSPQFVGNLRESPLGQEKTL-------EQILEYELLLIQQLNFHLIVHNPYRPFEGFL 178

Query: 124 NDMEKLFH--ENTEMLQ 137
            D++  +   EN E+L+
Sbjct: 179 IDLKTRYPLLENPEILR 188

[Close]

BLAST of CmaCh03G010040 vs. ExPASy TrEMBL
Match: A0A6J1IV79 (cyclin-H1-1-like OS=Cucurbita maxima OX=3661 GN=LOC111478859 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.4e-51
Identity = 110/139 (79.14%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE
Sbjct: 42  MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 101

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           NHVSAEELG           H I         +L +  +++YCLEFGLIVYAPYRSVKGY
Sbjct: 102 NHVSAEELGKGISQD-----HQI---------ILNYEMIVYYCLEFGLIVYAPYRSVKGY 161

Query: 121 VNDMEKLFHENTEMLQMLK 140
           VNDMEKLFHENTEMLQMLK
Sbjct: 162 VNDMEKLFHENTEMLQMLK 166

[Close]

BLAST of CmaCh03G010040 vs. ExPASy TrEMBL
Match: A0A5D3CP29 (Cyclin-H1-1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005130 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.3e-44
Identity = 112/195 (57.44%), Postives = 129/195 (66.15%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           MRVFY+NKLQEVCNNFHFPHKIQATALIYFK FYLQWSVMQHNPK VMLTCIYAACKIEE
Sbjct: 81  MRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEE 140

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           NHVSAEELG           H I         +L +  +++  LEF LIVYAPYRSV+GY
Sbjct: 141 NHVSAEELGKGISQD-----HQI---------ILNYEMIVYQSLEFDLIVYAPYRSVEGY 200

Query: 121 VNDMEKLFHENTEMLQMLKVIVSLFNVIDILLYGQNYLLLFSEHYYNQSMRSKKPVH-VL 180
           VND+E+LFHEN EMLQMLK   SL   +D ++     LL         ++R    VH V+
Sbjct: 201 VNDIEELFHENAEMLQMLKATASL--EVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVI 259

Query: 181 TRNKCIDQTYKTRGS 195
             N  +D     + S
Sbjct: 261 DFNSYLDSILSRQNS 259

[Close]

BLAST of CmaCh03G010040 vs. ExPASy TrEMBL
Match: A0A1S3B075 (cyclin-H1-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484743 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.7e-44
Identity = 112/195 (57.44%), Postives = 129/195 (66.15%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           MRVFY+NKLQEVCNNFHFPHKIQATALIYFK FYLQWSVMQHNPK VMLTCIYAACKIEE
Sbjct: 81  MRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEE 140

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           NHVSAEELG           H I         +L +  +++  LEF LIVYAPYRSV+GY
Sbjct: 141 NHVSAEELGKGISQD-----HQI---------ILNYEMIVYQSLEFDLIVYAPYRSVEGY 200

Query: 121 VNDMEKLFHENTEMLQMLKVIVSLFNVIDILLYGQNYLLLFSEHYYNQSMRSKKPVH-VL 180
           VND+E+LFHEN EMLQMLK   SL   +D ++     LL         ++R    VH V+
Sbjct: 201 VNDIEELFHENAEMLQMLKATASL--DVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVI 259

Query: 181 TRNKCIDQTYKTRGS 195
             N  +D     + S
Sbjct: 261 DFNSYLDSILSRQNS 259

[Close]

BLAST of CmaCh03G010040 vs. ExPASy TrEMBL
Match: A0A1S3B0M8 (cyclin-H1-1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484743 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.7e-44
Identity = 112/195 (57.44%), Postives = 129/195 (66.15%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           MRVFY+NKLQEVCNNFHFPHKIQATALIYFK FYLQWSVMQHNPK VMLTCIYAACKIEE
Sbjct: 39  MRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEE 98

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           NHVSAEELG           H I         +L +  +++  LEF LIVYAPYRSV+GY
Sbjct: 99  NHVSAEELGKGISQD-----HQI---------ILNYEMIVYQSLEFDLIVYAPYRSVEGY 158

Query: 121 VNDMEKLFHENTEMLQMLKVIVSLFNVIDILLYGQNYLLLFSEHYYNQSMRSKKPVH-VL 180
           VND+E+LFHEN EMLQMLK   SL   +D ++     LL         ++R    VH V+
Sbjct: 159 VNDIEELFHENAEMLQMLKATASL--DVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVI 217

Query: 181 TRNKCIDQTYKTRGS 195
             N  +D     + S
Sbjct: 219 DFNSYLDSILSRQNS 217

[Close]

BLAST of CmaCh03G010040 vs. ExPASy TrEMBL
Match: A0A1S4DT64 (cyclin-H1-1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484743 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.7e-44
Identity = 112/195 (57.44%), Postives = 129/195 (66.15%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           MRVFY+NKLQEVCNNFHFPHKIQATALIYFK FYLQWSVMQHNPK VMLTCIYAACKIEE
Sbjct: 24  MRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEE 83

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           NHVSAEELG           H I         +L +  +++  LEF LIVYAPYRSV+GY
Sbjct: 84  NHVSAEELGKGISQD-----HQI---------ILNYEMIVYQSLEFDLIVYAPYRSVEGY 143

Query: 121 VNDMEKLFHENTEMLQMLKVIVSLFNVIDILLYGQNYLLLFSEHYYNQSMRSKKPVH-VL 180
           VND+E+LFHEN EMLQMLK   SL   +D ++     LL         ++R    VH V+
Sbjct: 144 VNDIEELFHENAEMLQMLKATASL--DVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVI 202

Query: 181 TRNKCIDQTYKTRGS 195
             N  +D     + S
Sbjct: 204 DFNSYLDSILSRQNS 202

[Close]

BLAST of CmaCh03G010040 vs. NCBI nr
Match: XP_022979128.1 (cyclin-H1-1-like, partial [Cucurbita maxima])

HSP 1 Score: 212.6 bits (540), Expect = 3.0e-51
Identity = 110/139 (79.14%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE
Sbjct: 42  MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 101

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           NHVSAEELG           H I         +L +  +++YCLEFGLIVYAPYRSVKGY
Sbjct: 102 NHVSAEELGKGISQD-----HQI---------ILNYEMIVYYCLEFGLIVYAPYRSVKGY 161

Query: 121 VNDMEKLFHENTEMLQMLK 140
           VNDMEKLFHENTEMLQMLK
Sbjct: 162 VNDMEKLFHENTEMLQMLK 166

[Close]

BLAST of CmaCh03G010040 vs. NCBI nr
Match: XP_038883649.1 (cyclin-H1-1 isoform X1 [Benincasa hispida])

HSP 1 Score: 192.2 bits (487), Expect = 4.2e-45
Identity = 103/144 (71.53%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           MRVFY+NKLQEVCNNFHFPHKIQATALIYFK FYLQWSVMQHNPK VMLTCIYAACKIEE
Sbjct: 81  MRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEE 140

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           NHVSAEELG           H I         +L +  +++  LEF LIVYAPYRSV+GY
Sbjct: 141 NHVSAEELGKGISQD-----HQI---------ILNYEMIVYQSLEFDLIVYAPYRSVEGY 200

Query: 121 VNDMEKLFHENTEMLQMLKVIVSL 145
           VND+E+LFHEN EMLQMLKV  SL
Sbjct: 201 VNDIEELFHENAEMLQMLKVTASL 210

[Close]

BLAST of CmaCh03G010040 vs. NCBI nr
Match: XP_038883650.1 (cyclin-H1-1 isoform X2 [Benincasa hispida])

HSP 1 Score: 192.2 bits (487), Expect = 4.2e-45
Identity = 103/144 (71.53%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           MRVFY+NKLQEVCNNFHFPHKIQATALIYFK FYLQWSVMQHNPK VMLTCIYAACKIEE
Sbjct: 24  MRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEE 83

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           NHVSAEELG           H I         +L +  +++  LEF LIVYAPYRSV+GY
Sbjct: 84  NHVSAEELGKGISQD-----HQI---------ILNYEMIVYQSLEFDLIVYAPYRSVEGY 143

Query: 121 VNDMEKLFHENTEMLQMLKVIVSL 145
           VND+E+LFHEN EMLQMLKV  SL
Sbjct: 144 VNDIEELFHENAEMLQMLKVTASL 153

[Close]

BLAST of CmaCh03G010040 vs. NCBI nr
Match: XP_031744087.1 (cyclin-H1-1 isoform X2 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 2.7e-44
Identity = 102/144 (70.83%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           MRVFY+NKLQEVCNNFHFPHKIQATALIYFK FYLQWSVMQHNPK VMLTCIYAACKIEE
Sbjct: 81  MRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEE 140

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           NHVSAEELG           H I         +L +  +++  LEF LIVYAPYRSV+GY
Sbjct: 141 NHVSAEELGKGISQD-----HQI---------ILNYEMIVYQSLEFDLIVYAPYRSVEGY 200

Query: 121 VNDMEKLFHENTEMLQMLKVIVSL 145
           VND+E+LF+EN EMLQMLKV  SL
Sbjct: 201 VNDIEELFNENAEMLQMLKVTASL 210

[Close]

BLAST of CmaCh03G010040 vs. NCBI nr
Match: TYK12918.1 (cyclin-H1-1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 189.5 bits (480), Expect = 2.7e-44
Identity = 112/195 (57.44%), Postives = 129/195 (66.15%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           MRVFY+NKLQEVCNNFHFPHKIQATALIYFK FYLQWSVMQHNPK VMLTCIYAACKIEE
Sbjct: 81  MRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEE 140

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           NHVSAEELG           H I         +L +  +++  LEF LIVYAPYRSV+GY
Sbjct: 141 NHVSAEELGKGISQD-----HQI---------ILNYEMIVYQSLEFDLIVYAPYRSVEGY 200

Query: 121 VNDMEKLFHENTEMLQMLKVIVSLFNVIDILLYGQNYLLLFSEHYYNQSMRSKKPVH-VL 180
           VND+E+LFHEN EMLQMLK   SL   +D ++     LL         ++R    VH V+
Sbjct: 201 VNDIEELFHENAEMLQMLKATASL--EVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVI 259

Query: 181 TRNKCIDQTYKTRGS 195
             N  +D     + S
Sbjct: 261 DFNSYLDSILSRQNS 259

[Close]

BLAST of CmaCh03G010040 vs. TAIR 10
Match: AT5G27620.1 (cyclin H;1 )

HSP 1 Score: 142.1 bits (357), Expect = 4.6e-34
Identity = 76/142 (53.52%), Postives = 97/142 (68.31%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           MR FY+ K+QEVC+ F FPHKIQATAL YFK FYLQWSVMQH+PK +MLTC+YAACKIEE
Sbjct: 79  MRAFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVMQHHPKEIMLTCVYAACKIEE 138

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           NHVSAEE+G           H I         +L +   +   LEF LIVYAPYR+++G+
Sbjct: 139 NHVSAEEIGKGINQD-----HRI---------ILKYEMAVLQSLEFDLIVYAPYRAIEGF 198

Query: 121 VNDMEKLFHENTEMLQMLKVIV 143
           VN+ME+      + +Q L+ ++
Sbjct: 199 VNNMEEFLQARDDEIQKLESLL 206

[Close]

BLAST of CmaCh03G010040 vs. TAIR 10
Match: AT5G48630.1 (Cyclin family protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.5e-05
Identity = 34/123 (27.64%), Postives = 60/123 (48.78%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           +++   N + ++  +     ++ ATA+ Y +  Y + S+ ++ P+ V  TC+Y ACK EE
Sbjct: 40  IKLHMSNYISKLAQHIKIRQRVVATAVTYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEE 99

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           + V A+ L    YM   Y        R     +L     +   L F L+V+ PYRS+  +
Sbjct: 100 SVVHAKLLVF--YMKKLYADEKF---RYEIKDILEMEMKVLEALNFYLVVFHPYRSLPEF 157

Query: 121 VND 124
           + D
Sbjct: 160 LQD 157

[Close]

BLAST of CmaCh03G010040 vs. TAIR 10
Match: AT5G48630.2 (Cyclin family protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.5e-05
Identity = 34/123 (27.64%), Postives = 60/123 (48.78%), Query Frame = 0


Query: 1   MRVFYDNKLQEVCNNFHFPHKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEE 60
           +++   N + ++  +     ++ ATA+ Y +  Y + S+ ++ P+ V  TC+Y ACK EE
Sbjct: 43  IKLHMSNYISKLAQHIKIRQRVVATAVTYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEE 102

Query: 61  NHVSAEELGMDCYMTCFYHVHFIYFCRVFFSPLLLFIFLLFYCLEFGLIVYAPYRSVKGY 120
           + V A+ L    YM   Y        R     +L     +   L F L+V+ PYRS+  +
Sbjct: 103 SVVHAKLLVF--YMKKLYADEKF---RYEIKDILEMEMKVLEALNFYLVVFHPYRSLPEF 160

Query: 121 VND 124
           + D
Sbjct: 163 LQD 160

The following BLAST results are available for this feature:

BLAST of CmaCh03G010040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W5S1	6.5e-33	53.52	Cyclin-H1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCH1-1 PE=1 SV=1	[more]
Q10D80	1.1e-32	58.40	Cyclin-H1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCH1-1 PE=1 SV=1	[more]
P51947	1.4e-11	33.58	Cyclin-H OS=Xenopus laevis OX=8355 GN=ccnh PE=1 SV=1	[more]
Q55F19	9.1e-11	30.43	Putative cyclin-H OS=Dictyostelium discoideum OX=44689 GN=cycH PE=3 SV=1	[more]
Q3ZBL9	1.6e-10	32.85	Cyclin-H OS=Bos taurus OX=9913 GN=CCNH PE=2 SV=1	[more]

BLAST of CmaCh03G010040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IV79	1.4e-51	79.14	cyclin-H1-1-like OS=Cucurbita maxima OX=3661 GN=LOC111478859 PE=3 SV=1	[more]
A0A5D3CP29	1.3e-44	57.44	Cyclin-H1-1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3B075	1.7e-44	57.44	cyclin-H1-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484743 PE=3 SV=1	[more]
A0A1S3B0M8	1.7e-44	57.44	cyclin-H1-1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484743 PE=3 SV=1	[more]
A0A1S4DT64	1.7e-44	57.44	cyclin-H1-1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484743 PE=3 SV=1	[more]

BLAST of CmaCh03G010040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022979128.1	3.0e-51	79.14	cyclin-H1-1-like, partial [Cucurbita maxima]	[more]
XP_038883649.1	4.2e-45	71.53	cyclin-H1-1 isoform X1 [Benincasa hispida]	[more]
XP_038883650.1	4.2e-45	71.53	cyclin-H1-1 isoform X2 [Benincasa hispida]	[more]
XP_031744087.1	2.7e-44	70.83	cyclin-H1-1 isoform X2 [Cucumis sativus]	[more]
TYK12918.1	2.7e-44	57.44	cyclin-H1-1 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of CmaCh03G010040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27620.1	4.6e-34	53.52	cyclin H;1	[more]
AT5G48630.1	3.5e-05	27.64	Cyclin family protein	[more]
AT5G48630.2	3.5e-05	27.64	Cyclin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 7..91 e-value: 6.3E-8 score: 42.3
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 1..68 e-value: 3.48628E-12 score: 58.0188
None	No IPR available	GENE3D	1.10.472.10		coord: 1..134 e-value: 8.0E-23 score: 82.9
None	No IPR available	PANTHER	PTHR10026:SF128	SUBFAMILY NOT NAMED	coord: 1..147
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 9..66 e-value: 5.7E-8 score: 32.6
IPR043198	Cyclin/Cyclin-like subunit Ssn8	PANTHER	PTHR10026	CYCLIN	coord: 1..147
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G010040.1	CmaCh03G010040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0051301	cell division
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity