CmaCh03G009650 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G009650
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	U1 small nuclear ribonucleoprotein A isoform X2
Location	Cma_Chr03: 6844657 .. 6852525 (+)
RNA-Seq Expression	CmaCh03G009650
Synteny	CmaCh03G009650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGACATAACGAGCTACTACGCGCCACCTCCGCAACCGCAACCACCGTCGCAGCCTTCTGGTCTTGAGGCGCCTCACTATCCCTATTACCAGGTGCCTCCTCCTCCTTCTTCAGCACCGTCGTCTCAGCATTACCTTGCTCAACACCCGCCAACCTTCGCTTCCTATGGCTTACCTTTTTTACCTCACGCAGCCTCCATTAATGAGGTCCGAACCCTATTCATAGCTGGCCTTCCTGAAGATGTCAAGCCCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCGGGCTACGAGTCCTCTCATCTTCGGAGCCCCACGCAGACGACCCAGGTGTTGTACTTTGTTTTTCTAATTTGCAAAATTGTTGATTCTTGTGGCATTTTCTTTTTATTCTGAATGAGGATAGTCACTTAATTTGGGTGCCTGGATGCTTACATATGTAAATACTCTTTATCTTCTAAAGTCTGACGTCTGAGTAAACTCGTGGACATTAGTTGCGTTAGTATCAAAGATGGAGATTAAACACCGGTCCGTAGACGATTCTGGTTTGGTTACTTTACGTTTGAGGTTCTTGAAGAAGTTCAAGATTATAATGGTTGAACGAAATTAACTTGGACCTGGTTTATTTTGGCTCATTATAATTCATCTTGACCAAGAATGTAAATGTTAATTAGGGAAGGCTTGGGATGAATCCATGGTAGCCATCTAGCTAGAATTTAATGCCCTACAAGGTTGCTTAACACCCGACATGACACGACCATGCAACTGGACCGATCAAAAAGTAAGAAACAAAAAATTAATAAGGTAAACCACATTTCTAATGAAAAAAGAAAAAAGAAATAAATCTAATTCTCAAAACGTAATCCAACATGGCATGAAAACACTCAAATGCCTACTCTGAGATTCGTTAAATAAACTATAAGTGTGCTGTGTCATACTCTAAAGGAAATGTCAGTGTCAATATTGGTGCCAATAGCCTAATACCAATGCAAATGTGCAATCTGGTGCTTATGTGGCTCGATTGGCCTACTGAATTTTAGTGGCATGCAACTTTTTAACGTTAACCCCTTTCACCCATCACTATTCCACAATGCTATGGAGCATGTGCACCTTTGTCATGTTTGGAACTATAGATTTTGCTCTGCTCCTTTCACAATGTAACCCTTCTTCAATGAAATCACTTTACCTGTCAATGACTACAGGAGCCGTGACCGTCCAATTATCTGCCTTAGCCAAGATGTAGCAGAGAGTTTTCAATGTCCTGGACAACAAATATGACTTGGTCGCTGTCATTTTTATGCATGAAAAATTCCTTAGCCTTTGCAATTCGAATTCAACTTTGACCAATCTAAACTTTTTTTTGCAATGCCTAAACAGGCTTGGATTGTGTTATTAGTATCCATGTTTAAGGGTTCTCAAGTTATTCGATGTAATCTCAGGTTCTGGGATGGTCATAGTGGTCATACGAAAGCTTGGGGACTTTTGTTTTCAACTAACAAATGCTATCCTAAGTGCTGTGGAGACCATAACTGAGATATTAATATCCCACGTTTACAACTAACAAACATTATGCTAATTGTTAGTTTCAAATTTTGTTAATATTGTTGTCGCATATTTATGTAAGTACCCTTCAGATATGTGTACTGAGTGCCTATGACTATCACTGTAACTTGTAAAAGCCTTTTCTTTTCCTTTTCCATTCTCTCACGAAATATCTTATGTATACAGCATTCCTATCACCGCCTGTGTTGATGGTAGAGCATATATTTTATTGATTAGCATCATGCATGGTTTTTTCTTACAATTTTTTTGGTGTGGTTACAGCCATTTGCATTTGCTGTATTCTCGGACCAGCAGTCTGCCGTAGGTGCAATGCATGCTGTAAATGTAAGTACTTGTTCCCAGCTTCAGTATTCCAAGTTCTTTCATTAAGAAAATCATTTCAATGATTAAAGGAAGTACACAAAATGAACGTGGAAGAAGAAATTAGCCCTGCCTTGGAGGATAAGCTCACCCCATCTTAAATCAGATCAGCAAGGAAAACTATCATGAAAACTATCATGCAATATAGAAAAGCATTTATTTCTGAATTTCTTATAATTAACAGCTGGAAGAGCTTCAAACTTCTGTAGCTTTCTGAAGGGAGCTGCCAAAGCAAAGCCAAGTATATAGAATCAAAACATTCTCCTCTTGTAATCTAATCCTCCAAACAAATTCATTGAAGGAATGACGTTACAATATCAGGGAACTCTTTCCATATATCAAATTTGTTTAAAACCCTGAGTTTGATTTACTATATTACCTTATGCATTGTTCGTCATTAATTGACCTTAAAAATAAGGTGCACACCGGACAGCTATCATTGCTGCTGTAACACTAAACTGTTAGGGTTTGGGGAACTCGTGAGGTACACTAAATTTCTTTGGGATCCTGAACCTTGAGCTCGATTTGAGTCATTCATTGACCCGAAGGATAAGGTAGACAGCTATTGTTGCTGCTATAACACTAAACAGTTACCAATTCCTGGATTACCATTTTTCTGCTGGTCCTTCTTTTGCCTCTTATGCTTTCTCACTCTCTACTTATTCCTCTATAGAATAGCTGTTCTAAAAGTGCGCTACTTAAGGTATTCCAAGCATTGGTATAAAAAGATTTCTACTCTAGGTAGTGTCTCACATTAAAACAATTGGTTGCTCTTTGTTGTAGGGGATGGTGTTTGATCTTGAGAAGCAGTCAGTACTATATGTTGATTTAGCTAAATCCAATTCAAGATCAAAACGGATGAGGACAGGTACATATCTTAATGGCTGTCCTCTTATGAATTTATATTTCAATTTCTATTTTCTATAGTGGTAAAACTAGTTTGAAATTTTTCGTTATGTGTTCATGAATTGGTTAGAGGATGAAAGATATGGATCGGACAAGAAAGCTAAAGTATCTATCTTTTCAAGGAGAACTCCTGATCCTGGTAAGTTGATTGCTTGACTCCTTTTCTGCCTGTAAACTCTTTCTTATACAAGCTTTTTCAAAAATTAATTAATTAAATAAAATTTTTGTCCTTTTGATACCATTTACGACTATTATTATGATTACTTTTAATGTATAAACCTGTCCTCTCTGATTTGAGGATGATTATGTGCTTCCTGTACAACCTCTTGGGGTAAGAAGTAATTGATTAGCCACGCAGGGGACACATTATTCTAAAAGCTCATTTTGCACATGTTTTGCACGCTTGGGCACTAGCAGGTCTTGGCAGCACTCACATGTCTGGAATGGGTAATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGGTCATCTGCACTACTTAGCACATCTTTATTATTGAAATGGTTGATTACAAGCTTATGTGAAGCTTATACATTATTGTATAACAATAATCACTAGTAGAATGTCCAAGGGCTTCAGTAAAAAGCTCTACTACATGCCCTGACTTCTGTGTTAGTTTTTAACTTTATACTTGCGTTATTATGTTTCTTCTTCTCTGTCCTAACTAACTTGCACTTTCTATCATCAGCCATGGAAGCTTTGATAACAAAACTGTAAATGATACAGTGGCTGCAAATGTGGTAAGGTCACTTTTTGTTGCAATTTGTGATTCTGCAGTCCCTATAAGCTGTGCCATTAAATCCTCCCTTTTCTGTCCAAAAAGCATTATATTACCAATAATTGAACTACTTATCCTGATGAAAGTAGCAAGTAATTTTTCACTCAATTATATAGCAAATTGGGATAACATTCACGGAATTAGCCAAAACTGTTTTAATTTTCATTTTCTATCCTTTTGAAATTGGCTACTCATTTTCCTTTAAATTTTTATAGTTCAATGTCTGTCTATGGGCTTCATTGTTGTACTGTGGTTTATTTTGACGAAAAGAATCATAAGAATGGTTTTGAGGGTAGATAGGTTGCGGGAGGATGTGTGGATATGGTGGACACACTGTAATGCCTCCCCATGGGTTCGTAATTCGAAATTGTTTCTTAACATTTGTATTTACCAAAAGTTGATTTCTTGTAGGTTGGTTTGTATTCCACACTTTTCTTTTGGCCTTCCTGTGGGTTTCTTTTAGTACTTGTAGTGAAAAGTTAATTTTCCCATTACAAAATAATGACCTCTCGAACGGGAGGCTTAACTTACCGTGAACAAACAAAGGGGAAACTTTATTTACCAACTTCTACAATATTATTTGCACGTATTCCTTTTGTTTTTTTGTTGTCTCTTTTCAAGTGGAGGGGAATTCTGGGAACAGGGCTGCAACCATATTAAATCTGGTTAATTTGAAGTTTCTTTCATGACATATTTAATACTTAGACGTAAATAAAGTCACCTTTTGTTTAGGTGAAAATATCTTAGTTATGTGTGAATGACCTTGTGTAGCCCAATCTATGTAGTGACTTTTGTTAACTTTGGCCTAATTGTTCTTCATTTCCAGACTCCTCAAAATCCCCCATGTCCAACACTTTTTGTGGCAAATCTAGGGCCAAGTTGCACAGAGCAAGAACTTATTCAAATTTTTTCTAGGTTGGTAATTTACTGCACGTTATTGGGTTATGTTCTGATCTTAGAACTTGTATTATCTGTTTGTTTGATTATTCCTTCCAGATGCCCGGGGTTTTTAAAACTAAAGATGCAGAGCACGTATGGGGCCCCAGTTGCTTTTGTTGATTTTCAGGTTAGCAGAGCCCTTCCTTTTCTCAATATTATTTTTCTGTTGTTGATAATTTTTTTTTTCTACTTCAATGGTTCAGGATACCGCCTGTTCAACTGGAGCACTGAACCATCTGCAAGGCTCAATTCTGTACTCATCACCTCCTGGGGAGGGCATGCGATTGGAGTATCCTTTTGCAAGATTATTATTCATTACAACTGGACTGCTACATCATGTCTTCAAATGTTTTGCTTAACCCAGAATTTAGGTACGCAAAATCACGAATGGGTATGCGAAAGAAATTGAAATGAATAATACAAGCAACGAGAACAGGAGCCAAAAAGGAAGAGTCAAGTAAAGAGAAACCCTCGGGCGATGTTCCCACATGAATCTATGAAGGCCAGAGGAGTTTCATTACTTGGTACTGTTGTGCAGGTGAGTAAATTTGCCACATATGCGATGCCCATTTTTTGATTGTATGTATCAAATTCCATGCTCATTGGATAACGCTGATAAAGCTGTTCCAATATGTATTGTAATATTATGGTATGTCCACCGAATGGCTAGTTGCCAAGTAAAATTTTTGTGGTAAATTTAGTGAATTATATTCAATCGTGGAGTTTTAATATCATCAAATCCTTAATTGGATTGGCACTAGTTTAAGAAAATGATTGTTCAAACTATGTTATCGTTTCTCCATCTGCTCTTCCTATTTGTGGTTAAGCAGCGATGAATTATCCGTTTGTTCTTATCCAACATTGTAGCTCTGACTTTGAATGAAATTTGAATTTCACACGTGTTTTGTAAGCTAAATTCATTGAACTGGTTTTTCTTCTTCTTCAAGCACTTATTTTATTTTTAAATAAAAGAATTTTCGTTGACTAGCTTCTAAAAATCAAAGTTATTGTCAATTTCACGTCACTTTTAAAAACACATTGTTTTTCTTCTAGATTTAAAAATGTGGAATTGAGTAAATAGTCCATGCTACCTACAATAGTCTAATTACCCTGCCCTGTCTCTTTCCCATTGTGTTAAGTTCTGTGAGTCTTGCATTGTTATATCATTTCCTTCAACAAGAATTCTACATAAACAAAATATTAATGGGACAATGGGTCCTTGTATTAAGATTGAAAGGTATTTGTATTGGTAGAGATGATGAGATTTATAGGAATTTTGGGGCAAAAAATGTGAGAGAGATGGAAATTGGGCCTGAATTAGGGGCAGGGGCGACAGAAACAAGGATTATAAGAAGAAACAAACATGTCCGCAGATATCGTTATCGTGTGGAGTAAAAGTCAATCGTCCCCCAACCGTATCCGCCCACCGACCACCCACCACCCACCGACCTTCCCCCTTCTTTCCATTTTTTACTTCTGGTTATAACTTTAAAAAATACCATTTTGGTTAGGTATTTTATATGTTTCAAACCAAACTTTAGAGATTCGTAGTAATATTTGTGCTAAATAAAATAGTGAGTTTAAGAATGAAAGTATATAGTAATACACACACACACATATATATATATACTTGGAAGTCCACTTGAGGTTTCACACAAAATGACAGCCCCACTCCCCCACTACCCTTCCACTATTCTAATTATGGTTTGTTTTTATTTAATGCCCATCTTATATTAAACAATAAAATCAACAGAATGGAATTTAAATTCGGGTTTGAGTCTTCACATTTCATCATGACCGATGCTTAAATGTAGCGTTTTCTTTCTCTACAAAAATCATGTAATATTAGGAAACATTAAATTGAATTATGATGAGATCAGTTTTATGCATTGCTTTGAAACTCACATAATCAATCAATTTCTTTTCTAAACGATGTAGAGATCAAATATGAAAAGGGAAGTATCAAATAAATTATATTTTTAACCAAAAAAAGAAAAGTGGTGAGGTGAGACTGTACTGAGATGTCACGTGGCACACTACAGCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAATGAATGTTTTTATCGATGATTGGTTGGAGCAAAATTATTTAAAAAATAAAGCTGTGGACACCTTTGAAGTGTCACGAACCCAATATATATTCACGTTGCCGTCTGCTCATCGTTTAAATTTTTTTATTAATTTTTTCAAGAAAATTAAAATTTTAAAACCTGCAAAGATAGCTATAACATTTTATAAAATTAAGCATAATTAAAATATATCAGAAGAAAGTAGGTGGCACCGCTTTTAAAAATCTGTTGCTACTTTTAAAATGGGATTAAGAATTGAAATGTTTGATATAAAGGGGGTGAGATTTTGTCGGTGAATTTCACTTTGGGCGCACATAAATATAAACCCTTTATTTCTAATTTATTGAGATACGGAAAAGAAGAGGAAGAAAAAAAAAAAAAAAAAAATTATATGAACGTGGGAGGCTAATTGAGATGAGAAACTTGGAGGCAAAGTAGCAGTAGTAGGAGTAGAGCGAAGAAGGGGAGAAATGGAGATTGCAAAATCCAAACCCAAAATCAAACCCTTTTCTCTTATCCCACAAAATTCGTAGCTACAGTAGCGAAGCTCATCAATCGCATCCCCTTTTTGTTCCTTTTCATGAAGATTCAGATTCTGGGTTAGGCCAAGGGAGAGGTGAGATTTGGAATTGGAGGGCCATGGAGGGCGGAGGAGAGGGAGGTCGGGAGGGTACCAGAAAAAGAGGGGTCCACAATCAGAAGCTGTACAAAGGGATAAGGATGAGGAAGTGGGGGAAGTGGGTGGCTGAGATTCGAGAACCCAATAAGCGCTCCAGGATTTGGCTCGGCTCTTACTCTTCTCCAGTGGCCGCTGCCAGGGCCTACGATACCGCTCTGTATTACCTCAGAGGCCCCTCCGCCAGGCTTAATTTTCCCGACTTGTTAGCCGGGGAAGGACGCGGAATTAGCGGCGGTGGATGTGGCGACATGTCGGCGGCTACTATACGGAAGAAAGCCACGGAGGTGGGCGCACGAGTGGATGCTCTGGAGAGTTCCTTAGGTCATCACCAACACAATCACAACAATCGGAACCATCATTCCCATGCATCGGCGTCTCCGCCAGAGACGAAAGTCTGCAGCGGGTTTTTGGATCGGATGGATTTGAACAAATTACCCGACCCGGAAGAAGATGATGAAGAAGGAGATGGGGAGTTCGAGTGGGAGAGACAATGA

mRNA sequence

ATGGACGACATAACGAGCTACTACGCGCCACCTCCGCAACCGCAACCACCGTCGCAGCCTTCTGGTCTTGAGGCGCCTCACTATCCCTATTACCAGGTGCCTCCTCCTCCTTCTTCAGCACCGTCGTCTCAGCATTACCTTGCTCAACACCCGCCAACCTTCGCTTCCTATGGCTTACCTTTTTTACCTCACGCAGCCTCCATTAATGAGGTCCGAACCCTATTCATAGCTGGCCTTCCTGAAGATGTCAAGCCCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCGGGCTACGAGTCCTCTCATCTTCGGAGCCCCACGCAGACGACCCAGCCATTTGCATTTGCTGTATTCTCGGACCAGCAGTCTGCCGTAGGTGCAATGCATGCTGTAAATAATAGCTGTTCTAAAAGTGCGCTACTTAAGGGGATGGTGTTTGATCTTGAGAAGCAGTCAGTACTATATGTTGATTTAGCTAAATCCAATTCAAGATCAAAACGGATGAGGACAGAGGATGAAAGATATGGATCGGACAAGAAAGCTAAAGTATCTATCTTTTCAAGGAGAACTCCTGATCCTGGTCTTGGCAGCACTCACATGTCTGGAATGGGTAATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGCCATGGAAGCTTTGATAACAAAACTGTAAATGATACAGTGGCTGCAAATGTGACTCCTCAAAATCCCCCATGTCCAACACTTTTTGTGGCAAATCTAGGGCCAAGTTGCACAGAGCAAGAACTTATTCAAATTTTTTCTAGATGCCCGGGGTTTTTAAAACTAAAGATGCAGAGCACGTATGGGGCCCCAGTTGCTTTTGTTGATTTTCAGGATACCGCCTGTTCAACTGGAGCACTGAACCATCTGCAAGGCTCAATTCTGTACTCATCACCTCCTGGGGAGGGCATGCGATTGGACTACAGTAGCGAAGCTCATCAATCGCATCCCCTTTTTGTTCCTTTTCATGAAGATTCAGATTCTGGGTTAGGCCAAGGGAGAGGTGAGATTTGGAATTGGAGGGCCATGGAGGGCGGAGGAGAGGGAGGTCGGGAGGGTACCAGAAAAAGAGGGGTCCACAATCAGAAGCTGTACAAAGGGATAAGGATGAGGAAGTGGGGGAAGTGGGTGGCTGAGATTCGAGAACCCAATAAGCGCTCCAGGATTTGGCTCGGCTCTTACTCTTCTCCAGTGGCCGCTGCCAGGGCCTACGATACCGCTCTGTATTACCTCAGAGGCCCCTCCGCCAGGCTTAATTTTCCCGACTTGTTAGCCGGGGAAGGACGCGGAATTAGCGGCGGTGGATGTGGCGACATGTCGGCGGCTACTATACGGAAGAAAGCCACGGAGGTGGGCGCACGAGTGGATGCTCTGGAGAGTTCCTTAGGTCATCACCAACACAATCACAACAATCGGAACCATCATTCCCATGCATCGGCGTCTCCGCCAGAGACGAAAGTCTGCAGCGGGTTTTTGGATCGGATGGATTTGAACAAATTACCCGACCCGGAAGAAGATGATGAAGAAGGAGATGGGGAGTTCGAGTGGGAGAGACAATGA

Coding sequence (CDS)

ATGGACGACATAACGAGCTACTACGCGCCACCTCCGCAACCGCAACCACCGTCGCAGCCTTCTGGTCTTGAGGCGCCTCACTATCCCTATTACCAGGTGCCTCCTCCTCCTTCTTCAGCACCGTCGTCTCAGCATTACCTTGCTCAACACCCGCCAACCTTCGCTTCCTATGGCTTACCTTTTTTACCTCACGCAGCCTCCATTAATGAGGTCCGAACCCTATTCATAGCTGGCCTTCCTGAAGATGTCAAGCCCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCGGGCTACGAGTCCTCTCATCTTCGGAGCCCCACGCAGACGACCCAGCCATTTGCATTTGCTGTATTCTCGGACCAGCAGTCTGCCGTAGGTGCAATGCATGCTGTAAATAATAGCTGTTCTAAAAGTGCGCTACTTAAGGGGATGGTGTTTGATCTTGAGAAGCAGTCAGTACTATATGTTGATTTAGCTAAATCCAATTCAAGATCAAAACGGATGAGGACAGAGGATGAAAGATATGGATCGGACAAGAAAGCTAAAGTATCTATCTTTTCAAGGAGAACTCCTGATCCTGGTCTTGGCAGCACTCACATGTCTGGAATGGGTAATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGCCATGGAAGCTTTGATAACAAAACTGTAAATGATACAGTGGCTGCAAATGTGACTCCTCAAAATCCCCCATGTCCAACACTTTTTGTGGCAAATCTAGGGCCAAGTTGCACAGAGCAAGAACTTATTCAAATTTTTTCTAGATGCCCGGGGTTTTTAAAACTAAAGATGCAGAGCACGTATGGGGCCCCAGTTGCTTTTGTTGATTTTCAGGATACCGCCTGTTCAACTGGAGCACTGAACCATCTGCAAGGCTCAATTCTGTACTCATCACCTCCTGGGGAGGGCATGCGATTGGACTACAGTAGCGAAGCTCATCAATCGCATCCCCTTTTTGTTCCTTTTCATGAAGATTCAGATTCTGGGTTAGGCCAAGGGAGAGGTGAGATTTGGAATTGGAGGGCCATGGAGGGCGGAGGAGAGGGAGGTCGGGAGGGTACCAGAAAAAGAGGGGTCCACAATCAGAAGCTGTACAAAGGGATAAGGATGAGGAAGTGGGGGAAGTGGGTGGCTGAGATTCGAGAACCCAATAAGCGCTCCAGGATTTGGCTCGGCTCTTACTCTTCTCCAGTGGCCGCTGCCAGGGCCTACGATACCGCTCTGTATTACCTCAGAGGCCCCTCCGCCAGGCTTAATTTTCCCGACTTGTTAGCCGGGGAAGGACGCGGAATTAGCGGCGGTGGATGTGGCGACATGTCGGCGGCTACTATACGGAAGAAAGCCACGGAGGTGGGCGCACGAGTGGATGCTCTGGAGAGTTCCTTAGGTCATCACCAACACAATCACAACAATCGGAACCATCATTCCCATGCATCGGCGTCTCCGCCAGAGACGAAAGTCTGCAGCGGGTTTTTGGATCGGATGGATTTGAACAAATTACCCGACCCGGAAGAAGATGATGAAGAAGGAGATGGGGAGTTCGAGTGGGAGAGACAATGA

Protein sequence

MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAVGAMHAVNNSCSKSALLKGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKKAKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGMRLDYSSEAHQSHPLFVPFHEDSDSGLGQGRGEIWNWRAMEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTALYYLRGPSARLNFPDLLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHHQHNHNNRNHHSHASASPPETKVCSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ

Homology

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BLAST of CmaCh03G009650 vs. ExPASy Swiss-Prot
Match: Q9SW63 (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana OX=3702 GN=RAP2-10 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 5.3e-45
Identity = 109/180 (60.56%), Postives = 125/180 (69.44%), Query Frame = 0


Query: 364 TRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTALYYLRG 423
           TRKR     K YKGIRMRKWGKWVAEIREPNKRSRIWLGSYS+P AAARAYDTA++YLRG
Sbjct: 23  TRKR----DKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRG 82

Query: 424 PSARLNFPDLLA------GEGRGISGGGCGDMSAATIRKKATEVGARVDALES-----SL 483
           PSARLNFP+LLA      G G G++GG  GDMSAA IR+KA EVGA+VDALE+     + 
Sbjct: 83  PSARLNFPELLAGVTVTGGGGGGVNGG--GDMSAAYIRRKAAEVGAQVDALEAAGAGGNR 142

Query: 484 GHHQHNHNNRNH-----HSH--------ASASPPETKVCSGFLDRMDLNKLPDPEEDDEE 520
            HH H H   NH     HS           +S    K C+G L+R+DLNKLPDPE  D++
Sbjct: 143 HHHHHQHQRGNHDYVDNHSDYRINDDLMECSSKEGFKRCNGSLERVDLNKLPDPETSDDD 196

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BLAST of CmaCh03G009650 vs. ExPASy Swiss-Prot
Match: O22174 (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.7e-41
Identity = 97/159 (61.01%), Postives = 117/159 (73.58%), Query Frame = 0


Query: 363 GTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTALYYLR 422
           GTRKR +   K YKGIRMRKWGKWVAEIREPNKRSRIWLGSY++P AAARAYDTA++YLR
Sbjct: 19  GTRKRDL---KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLR 78

Query: 423 GPSARLNFPDLLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHHQHNHNNR 482
           GPSARLNFP+LLAG      GG  GD+SAA IR+KA EVGA+VDAL +++  +    N  
Sbjct: 79  GPSARLNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRG 138

Query: 483 NHHSHASASPPETKVCSGFLDRMDLNKLPDPEEDDEEGD 522
           ++    +      K  +G L+R+DLNKLPDPE  D + D
Sbjct: 139 DYEKIENC----RKSGNGSLERVDLNKLPDPENSDGDDD 170

[Close]

BLAST of CmaCh03G009650 vs. ExPASy Swiss-Prot
Match: Q9FH94 (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.6e-41
Identity = 106/192 (55.21%), Postives = 130/192 (67.71%), Query Frame = 0


Query: 353 MEGGG--EGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAA 412
           MEGGG  +    GTRKR     + YKGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AA
Sbjct: 1   MEGGGVADVAVPGTRKR----DRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAA 60

Query: 413 ARAYDTALYYLRGPSARLNFPDLLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALES 472
           ARAYDTA++YLRGP+ARLNFP+LL GE          DMSAATIRKKATEVGA+VDAL +
Sbjct: 61  ARAYDTAVFYLRGPTARLNFPELLPGEKFSDE-----DMSAATIRKKATEVGAQVDALGT 120

Query: 473 SLGHHQH---------NHNNRNHH--------SHASASPPETKVCSG--FLDRMDLNKLP 524
           ++ +++H         + +N+N H                + ++ SG   LDR+DLNKLP
Sbjct: 121 AVQNNRHRVFGQNRDSDVDNKNFHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLP 180

[Close]

BLAST of CmaCh03G009650 vs. ExPASy Swiss-Prot
Match: Q9SNE1 (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.8e-35
Identity = 85/148 (57.43%), Postives = 105/148 (70.95%), Query Frame = 0


Query: 372 QKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTALYYLRGPSARLNFP 431
           ++ +KGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYDTA++YLRGP+A LNFP
Sbjct: 18  ERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFP 77

Query: 432 DLLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHHQHNHNNRNHHSHASAS 491
           +LL             DMSAATIRKKATEVGA+VDA+ +++     N+  R   S     
Sbjct: 78  ELLPCT-------SAEDMSAATIRKKATEVGAQVDAIGATV---VQNNKRRRVFSQ---- 137

Query: 492 PPETKVCSGFLDRMDLNKLPDPEEDDEE 520
             +     G L+ +DLNKLPDPE  D++
Sbjct: 138 --KRDFGGGLLELVDLNKLPDPENLDDD 149

[Close]

BLAST of CmaCh03G009650 vs. ExPASy Swiss-Prot
Match: Q8W3M3 (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 6.5e-35
Identity = 81/142 (57.04%), Postives = 96/142 (67.61%), Query Frame = 0


Query: 371 NQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTALYYLRGPSARLNF 430
           N+K YKGIRMRKWGKWVAEIREPNKRSRIWLGSY + VAAARAYDTA++YLRGPSARLNF
Sbjct: 32  NEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNF 91

Query: 431 PDLLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHHQHNHNNRNHHSHASA 490
           P+ +  +G G  G G GDMS   IRKKA EVGARVDA                       
Sbjct: 92  PEEVFKDGNGGEGLG-GDMSPTLIRKKAAEVGARVDA----------------------- 146

Query: 491 SPPETKVCSGFLDRMDLNKLPD 513
              E ++ +  ++ +D+NKLP+
Sbjct: 152 ---ELRLENRMVENLDMNKLPE 146

[Close]

BLAST of CmaCh03G009650 vs. ExPASy TrEMBL
Match: A0A6J1IQG5 (protein WHI4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477875 PE=4 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 2.9e-171
Identity = 307/319 (96.24%), Postives = 309/319 (96.87%), Query Frame = 0


Query: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60
           MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP
Sbjct: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60

Query: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120
           FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD
Sbjct: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNNSCSKSALLKGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK 180
           QQSAVGAMHAVN          GMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK
Sbjct: 121 QQSAVGAMHAVN----------GMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK 180

Query: 181 AKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQNP 240
           AKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQNP
Sbjct: 181 AKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQNP 240

Query: 241 PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL 300
           PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL
Sbjct: 241 PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL 300

Query: 301 QGSILYSSPPGEGMRLDYS 320
           QGSILYSSPPGEGMRL+Y+
Sbjct: 301 QGSILYSSPPGEGMRLEYA 309

[Close]

BLAST of CmaCh03G009650 vs. ExPASy TrEMBL
Match: A0A6J1IMS7 (U1 small nuclear ribonucleoprotein A isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477875 PE=4 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 7.2e-170
Identity = 307/320 (95.94%), Postives = 309/320 (96.56%), Query Frame = 0


Query: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60
           MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP
Sbjct: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60

Query: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120
           FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD
Sbjct: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNNSCSKSALLKGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK 180
           QQSAVGAMHAVN          GMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK
Sbjct: 121 QQSAVGAMHAVN----------GMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK 180

Query: 181 AKVSIFSRRTPDP-GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQN 240
           AKVSIFSRRTPDP GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQN
Sbjct: 181 AKVSIFSRRTPDPAGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQN 240

Query: 241 PPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNH 300
           PPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNH
Sbjct: 241 PPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNH 300

Query: 301 LQGSILYSSPPGEGMRLDYS 320
           LQGSILYSSPPGEGMRL+Y+
Sbjct: 301 LQGSILYSSPPGEGMRLEYA 310

[Close]

BLAST of CmaCh03G009650 vs. ExPASy TrEMBL
Match: A0A6J1GD02 (protein WHI4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453048 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 6.1e-169
Identity = 303/319 (94.98%), Postives = 307/319 (96.24%), Query Frame = 0


Query: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60
           MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP
Sbjct: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60

Query: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120
           FLPHAASINEVRTLFIAGLP+DVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD
Sbjct: 61  FLPHAASINEVRTLFIAGLPDDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNNSCSKSALLKGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK 180
           QQSAVGAMHAVN          GMVFDLEKQSVLYVDLAKSNSRSKR RTEDERYGSDKK
Sbjct: 121 QQSAVGAMHAVN----------GMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKK 180

Query: 181 AKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQNP 240
           AKVSIFSR TPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFD+KTVNDTVAANVTPQNP
Sbjct: 181 AKVSIFSRSTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDSKTVNDTVAANVTPQNP 240

Query: 241 PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL 300
           PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL
Sbjct: 241 PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL 300

Query: 301 QGSILYSSPPGEGMRLDYS 320
           QGSILYSSPPGEGMRL+Y+
Sbjct: 301 QGSILYSSPPGEGMRLEYA 309

[Close]

BLAST of CmaCh03G009650 vs. ExPASy TrEMBL
Match: A0A6J1GCW9 (U1 small nuclear ribonucleoprotein A isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453048 PE=4 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 1.5e-167
Identity = 303/320 (94.69%), Postives = 307/320 (95.94%), Query Frame = 0


Query: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60
           MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP
Sbjct: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60

Query: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120
           FLPHAASINEVRTLFIAGLP+DVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD
Sbjct: 61  FLPHAASINEVRTLFIAGLPDDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNNSCSKSALLKGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK 180
           QQSAVGAMHAVN          GMVFDLEKQSVLYVDLAKSNSRSKR RTEDERYGSDKK
Sbjct: 121 QQSAVGAMHAVN----------GMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKK 180

Query: 181 AKVSIFSRRTPDP-GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQN 240
           AKVSIFSR TPDP GLGSTHMSGMGNSAYNTIGYPSAQSHGSFD+KTVNDTVAANVTPQN
Sbjct: 181 AKVSIFSRSTPDPAGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDSKTVNDTVAANVTPQN 240

Query: 241 PPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNH 300
           PPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNH
Sbjct: 241 PPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNH 300

Query: 301 LQGSILYSSPPGEGMRLDYS 320
           LQGSILYSSPPGEGMRL+Y+
Sbjct: 301 LQGSILYSSPPGEGMRLEYA 310

[Close]

BLAST of CmaCh03G009650 vs. ExPASy TrEMBL
Match: A0A6J1BU41 (protein WHI4 OS=Momordica charantia OX=3673 GN=LOC111005791 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.8e-160
Identity = 290/319 (90.91%), Postives = 298/319 (93.42%), Query Frame = 0


Query: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60
           MDD+ S+Y PPPQ  PP QPSGLEAPHYPYYQVPPPPSSAP SQHYLAQHPPTFA+YGLP
Sbjct: 1   MDDMASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLP 60

Query: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120
           FLPHAAS NEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD
Sbjct: 61  FLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNNSCSKSALLKGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK 180
           QQSA+GAMHAVN          GMVFDLEKQSVLYVDLAKSNSRSKR RTEDERYGSDKK
Sbjct: 121 QQSAIGAMHAVN----------GMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKK 180

Query: 181 AKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQNP 240
           AKVS+FSR TPD GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNK+VNDTVAANVTPQNP
Sbjct: 181 AKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKSVNDTVAANVTPQNP 240

Query: 241 PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL 300
           PCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL
Sbjct: 241 PCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL 300

Query: 301 QGSILYSSPPGEGMRLDYS 320
           QGSILYSSPPGEGMRL+Y+
Sbjct: 301 QGSILYSSPPGEGMRLEYA 308

[Close]

BLAST of CmaCh03G009650 vs. NCBI nr
Match: KAG6604168.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 979.9 bits (2532), Expect = 8.4e-282
Identity = 494/529 (93.38%), Postives = 500/529 (94.52%), Query Frame = 0


Query: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60
           MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP
Sbjct: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60

Query: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120
           FLPHAASINEVRTLFIAGLP+DVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD
Sbjct: 61  FLPHAASINEVRTLFIAGLPDDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNNSCSKSALLKGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK 180
           QQSAVGAMHAVN          GMVFDLEKQSVLYVDLAKSNSRSKR RTEDERYGSDKK
Sbjct: 121 QQSAVGAMHAVN----------GMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKK 180

Query: 181 AKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQNP 240
           AKVSIFSR TPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFD+KTVNDTVAANVTPQNP
Sbjct: 181 AKVSIFSRSTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDSKTVNDTVAANVTPQNP 240

Query: 241 PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL 300
           PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL
Sbjct: 241 PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL 300

Query: 301 QGSILYSSPPGEGMRLDYSSEAHQSHPLFVPFHEDSDSGLGQGRGEIWNWRAMEGGGEGG 360
           QGSILYSSPPGEGMRL+Y+               DSDSGLGQGRGEIWNWRAMEGGGEG 
Sbjct: 301 QGSILYSSPPGEGMRLEYAKS-----------RMDSDSGLGQGRGEIWNWRAMEGGGEGR 360

Query: 361 REGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTALYY 420
           REGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTA+YY
Sbjct: 361 REGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVYY 420

Query: 421 LRGPSARLNFPDLLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHHQHNHN 480
           LRGPSARLNFP+LLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHHQHNHN
Sbjct: 421 LRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHHQHNHN 480

Query: 481 NRNHHSHASASPPETKVCSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 530
           NRNHHSHASASPPETK CSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ
Sbjct: 481 NRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 508

[Close]

BLAST of CmaCh03G009650 vs. NCBI nr
Match: XP_022977593.1 (protein WHI4 isoform X1 [Cucurbita maxima])

HSP 1 Score: 611.7 bits (1576), Expect = 6.0e-171
Identity = 307/319 (96.24%), Postives = 309/319 (96.87%), Query Frame = 0


Query: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60
           MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP
Sbjct: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60

Query: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120
           FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD
Sbjct: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNNSCSKSALLKGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK 180
           QQSAVGAMHAVN          GMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK
Sbjct: 121 QQSAVGAMHAVN----------GMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK 180

Query: 181 AKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQNP 240
           AKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQNP
Sbjct: 181 AKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQNP 240

Query: 241 PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL 300
           PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL
Sbjct: 241 PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL 300

Query: 301 QGSILYSSPPGEGMRLDYS 320
           QGSILYSSPPGEGMRL+Y+
Sbjct: 301 QGSILYSSPPGEGMRLEYA 309

[Close]

BLAST of CmaCh03G009650 vs. NCBI nr
Match: XP_022977595.1 (U1 small nuclear ribonucleoprotein A isoform X2 [Cucurbita maxima])

HSP 1 Score: 607.1 bits (1564), Expect = 1.5e-169
Identity = 307/320 (95.94%), Postives = 309/320 (96.56%), Query Frame = 0


Query: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60
           MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP
Sbjct: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60

Query: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120
           FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD
Sbjct: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNNSCSKSALLKGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK 180
           QQSAVGAMHAVN          GMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK
Sbjct: 121 QQSAVGAMHAVN----------GMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK 180

Query: 181 AKVSIFSRRTPDP-GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQN 240
           AKVSIFSRRTPDP GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQN
Sbjct: 181 AKVSIFSRRTPDPAGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQN 240

Query: 241 PPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNH 300
           PPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNH
Sbjct: 241 PPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNH 300

Query: 301 LQGSILYSSPPGEGMRLDYS 320
           LQGSILYSSPPGEGMRL+Y+
Sbjct: 301 LQGSILYSSPPGEGMRLEYA 310

[Close]

BLAST of CmaCh03G009650 vs. NCBI nr
Match: XP_023543723.1 (protein WHI4 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 604.7 bits (1558), Expect = 7.4e-169
Identity = 303/319 (94.98%), Postives = 307/319 (96.24%), Query Frame = 0


Query: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60
           MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP
Sbjct: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60

Query: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120
           FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD
Sbjct: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNNSCSKSALLKGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK 180
           QQSAVGAMHAVN          GMVFDLEKQSVLYVDLAKSNSRSKR RTEDERYGSDKK
Sbjct: 121 QQSAVGAMHAVN----------GMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKK 180

Query: 181 AKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQNP 240
           AKVSIFSR TPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFD+KTVNDTVAANVTPQNP
Sbjct: 181 AKVSIFSRSTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDSKTVNDTVAANVTPQNP 240

Query: 241 PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL 300
           PCPTLFVANLGPSCTEQEL+QIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL
Sbjct: 241 PCPTLFVANLGPSCTEQELVQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL 300

Query: 301 QGSILYSSPPGEGMRLDYS 320
           QGSILYSSPPGEGMRL+Y+
Sbjct: 301 QGSILYSSPPGEGMRLEYA 309

[Close]

BLAST of CmaCh03G009650 vs. NCBI nr
Match: XP_022949757.1 (protein WHI4 isoform X2 [Cucurbita moschata])

HSP 1 Score: 604.0 bits (1556), Expect = 1.3e-168
Identity = 303/319 (94.98%), Postives = 307/319 (96.24%), Query Frame = 0


Query: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60
           MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP
Sbjct: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60

Query: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120
           FLPHAASINEVRTLFIAGLP+DVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD
Sbjct: 61  FLPHAASINEVRTLFIAGLPDDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNNSCSKSALLKGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKK 180
           QQSAVGAMHAVN          GMVFDLEKQSVLYVDLAKSNSRSKR RTEDERYGSDKK
Sbjct: 121 QQSAVGAMHAVN----------GMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKK 180

Query: 181 AKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQNP 240
           AKVSIFSR TPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFD+KTVNDTVAANVTPQNP
Sbjct: 181 AKVSIFSRSTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDSKTVNDTVAANVTPQNP 240

Query: 241 PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL 300
           PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL
Sbjct: 241 PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHL 300

Query: 301 QGSILYSSPPGEGMRLDYS 320
           QGSILYSSPPGEGMRL+Y+
Sbjct: 301 QGSILYSSPPGEGMRLEYA 309

[Close]

BLAST of CmaCh03G009650 vs. TAIR 10
Match: AT2G42240.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 279.6 bits (714), Expect = 5.1e-75
Identity = 170/325 (52.31%), Postives = 207/325 (63.69%), Query Frame = 0


Query: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHY--PYYQVPPPPSSAP---SSQHYLAQHPPTFA 60
           MDD+ +YY+                 HY  P    PPPP  +P   +S H  + + PT  
Sbjct: 1   MDDLEAYYS-----------------HYNLPAMVPPPPPGVSPIPITSAH--SVYLPTHV 60

Query: 61  SYGLPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAF 120
           S G        + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLRS +   +PFAF
Sbjct: 61  SIG--------ARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRS-SDGAKPFAF 120

Query: 121 AVFSDQQSAVGAMHAVNNSCSKSALLKGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERY 180
           AVFSD QSAV  MHA+N          GMVFDLEK S L++DLAKSN +SKR RT+D   
Sbjct: 121 AVFSDLQSAVAVMHALN----------GMVFDLEKHSTLHIDLAKSNPKSKRSRTDD--- 180

Query: 181 GSDKKAKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANV 240
           G +   K+  ++  T + G GS    GM +SAYNTIGY  AQS G   N       +   
Sbjct: 181 GWESLKKLKSWN-TTTESGFGSFQTPGMSSSAYNTIGYSPAQSQG-IANVAGRAPTSRKP 240

Query: 241 TPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTG 300
           +    PCPTLF+AN+GP+CTE ELIQ+FSRC GFLKLK+Q TYG PVAFVDFQD +CS+ 
Sbjct: 241 SKAADPCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSE 282

Query: 301 ALNHLQGSILYSSPPGEGMRLDYSS 321
           AL+ LQG++LYSS  GE +RL Y S
Sbjct: 301 ALHTLQGTVLYSSLTGEVLRLQYPS 282

[Close]

BLAST of CmaCh03G009650 vs. TAIR 10
Match: AT2G42240.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 279.3 bits (713), Expect = 6.6e-75
Identity = 169/324 (52.16%), Postives = 207/324 (63.89%), Query Frame = 0


Query: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHY--PYYQVPPPPSSAP---SSQHYLAQHPPTFA 60
           MDD+ +YY+                 HY  P    PPPP  +P   +S H  + + PT  
Sbjct: 1   MDDLEAYYS-----------------HYNLPAMVPPPPPGVSPIPITSAH--SVYLPTHV 60

Query: 61  SYGLPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAF 120
           S G        + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLRS +   +PFAF
Sbjct: 61  SIG--------ARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRS-SDGAKPFAF 120

Query: 121 AVFSDQQSAVGAMHAVNNSCSKSALLKGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERY 180
           AVFSD QSAV  MHA+N          GMVFDLEK S L++DLAKSN +SKR RT+D   
Sbjct: 121 AVFSDLQSAVAVMHALN----------GMVFDLEKHSTLHIDLAKSNPKSKRSRTDD--- 180

Query: 181 GSDKKAKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANV 240
           G +   K+  ++  T + G GS    GM +SAYNTIGY  AQS G   N       +   
Sbjct: 181 GWESLKKLKSWN-TTTESGFGSFQTPGMSSSAYNTIGYSPAQSQG-IANVAGRAPTSRKP 240

Query: 241 TPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTG 300
           +    PCPTLF+AN+GP+CTE ELIQ+FSRC GFLKLK+Q TYG PVAFVDFQD +CS+ 
Sbjct: 241 SKAADPCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSE 281

Query: 301 ALNHLQGSILYSSPPGEGMRLDYS 320
           AL+ LQG++LYSS  GE +RL Y+
Sbjct: 301 ALHTLQGTVLYSSLTGEVLRLQYA 281

[Close]

BLAST of CmaCh03G009650 vs. TAIR 10
Match: AT2G42240.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 276.2 bits (705), Expect = 5.6e-74
Identity = 168/321 (52.34%), Postives = 205/321 (63.86%), Query Frame = 0


Query: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHY--PYYQVPPPPSSAP---SSQHYLAQHPPTFA 60
           MDD+ +YY+                 HY  P    PPPP  +P   +S H  + + PT  
Sbjct: 1   MDDLEAYYS-----------------HYNLPAMVPPPPPGVSPIPITSAH--SVYLPTHV 60

Query: 61  SYGLPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAF 120
           S G        + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLRS +   +PFAF
Sbjct: 61  SIG--------ARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRS-SDGAKPFAF 120

Query: 121 AVFSDQQSAVGAMHAVNNSCSKSALLKGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERY 180
           AVFSD QSAV  MHA+N          GMVFDLEK S L++DLAKSN +SKR RT+D   
Sbjct: 121 AVFSDLQSAVAVMHALN----------GMVFDLEKHSTLHIDLAKSNPKSKRSRTDD--- 180

Query: 181 GSDKKAKVSIFSRRTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANV 240
           G +   K+  ++  T + G GS    GM +SAYNTIGY  AQS G   N       +   
Sbjct: 181 GWESLKKLKSWN-TTTESGFGSFQTPGMSSSAYNTIGYSPAQSQG-IANVAGRAPTSRKP 240

Query: 241 TPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTG 300
           +    PCPTLF+AN+GP+CTE ELIQ+FSRC GFLKLK+Q TYG PVAFVDFQD +CS+ 
Sbjct: 241 SKAADPCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSE 278

Query: 301 ALNHLQGSILYSSPPGEGMRL 317
           AL+ LQG++LYSS  GE +RL
Sbjct: 301 ALHTLQGTVLYSSLTGEVLRL 278

[Close]

BLAST of CmaCh03G009650 vs. TAIR 10
Match: AT4G36900.1 (related to AP2 10 )

HSP 1 Score: 183.7 bits (465), Expect = 3.8e-46
Identity = 109/180 (60.56%), Postives = 125/180 (69.44%), Query Frame = 0


Query: 364 TRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTALYYLRG 423
           TRKR     K YKGIRMRKWGKWVAEIREPNKRSRIWLGSYS+P AAARAYDTA++YLRG
Sbjct: 23  TRKR----DKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRG 82

Query: 424 PSARLNFPDLLA------GEGRGISGGGCGDMSAATIRKKATEVGARVDALES-----SL 483
           PSARLNFP+LLA      G G G++GG  GDMSAA IR+KA EVGA+VDALE+     + 
Sbjct: 83  PSARLNFPELLAGVTVTGGGGGGVNGG--GDMSAAYIRRKAAEVGAQVDALEAAGAGGNR 142

Query: 484 GHHQHNHNNRNH-----HSH--------ASASPPETKVCSGFLDRMDLNKLPDPEEDDEE 520
            HH H H   NH     HS           +S    K C+G L+R+DLNKLPDPE  D++
Sbjct: 143 HHHHHQHQRGNHDYVDNHSDYRINDDLMECSSKEGFKRCNGSLERVDLNKLPDPETSDDD 196

[Close]

BLAST of CmaCh03G009650 vs. TAIR 10
Match: AT2G23340.1 (DREB and EAR motif protein 3 )

HSP 1 Score: 171.4 bits (433), Expect = 1.9e-42
Identity = 97/159 (61.01%), Postives = 117/159 (73.58%), Query Frame = 0


Query: 363 GTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTALYYLR 422
           GTRKR +   K YKGIRMRKWGKWVAEIREPNKRSRIWLGSY++P AAARAYDTA++YLR
Sbjct: 19  GTRKRDL---KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLR 78

Query: 423 GPSARLNFPDLLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHHQHNHNNR 482
           GPSARLNFP+LLAG      GG  GD+SAA IR+KA EVGA+VDAL +++  +    N  
Sbjct: 79  GPSARLNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRG 138

Query: 483 NHHSHASASPPETKVCSGFLDRMDLNKLPDPEEDDEEGD 522
           ++    +      K  +G L+R+DLNKLPDPE  D + D
Sbjct: 139 DYEKIENC----RKSGNGSLERVDLNKLPDPENSDGDDD 170

The following BLAST results are available for this feature:

BLAST of CmaCh03G009650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SW63	5.3e-45	60.56	Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana OX=3702...	[more]
O22174	2.7e-41	61.01	Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH94	3.6e-41	55.21	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SNE1	3.8e-35	57.43	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8W3M3	6.5e-35	57.04	Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmaCh03G009650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IQG5	2.9e-171	96.24	protein WHI4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477875 PE=4 SV=1	[more]
A0A6J1IMS7	7.2e-170	95.94	U1 small nuclear ribonucleoprotein A isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GD02	6.1e-169	94.98	protein WHI4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453048 PE=4 SV=1	[more]
A0A6J1GCW9	1.5e-167	94.69	U1 small nuclear ribonucleoprotein A isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1BU41	1.8e-160	90.91	protein WHI4 OS=Momordica charantia OX=3673 GN=LOC111005791 PE=4 SV=1	[more]

BLAST of CmaCh03G009650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604168.1	8.4e-282	93.38	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022977593.1	6.0e-171	96.24	protein WHI4 isoform X1 [Cucurbita maxima]	[more]
XP_022977595.1	1.5e-169	95.94	U1 small nuclear ribonucleoprotein A isoform X2 [Cucurbita maxima]	[more]
XP_023543723.1	7.4e-169	94.98	protein WHI4 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022949757.1	1.3e-168	94.98	protein WHI4 isoform X2 [Cucurbita moschata]	[more]

BLAST of CmaCh03G009650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42240.2	5.1e-75	52.31	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G42240.1	6.6e-75	52.16	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G42240.3	5.6e-74	52.34	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G36900.1	3.8e-46	60.56	related to AP2 10	[more]
AT2G23340.1	1.9e-42	61.01	DREB and EAR motif protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 413..433 score: 52.29 coord: 375..386 score: 56.36
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 374..437 e-value: 2.8E-35 score: 133.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 375..423 e-value: 8.8E-11 score: 41.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 374..431 score: 21.654016
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 373..433 e-value: 9.71719E-27 score: 100.809
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 244..313 e-value: 5.3E-5 score: 32.6 coord: 73..149 e-value: 2.0E-6 score: 37.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 74..136 e-value: 1.5E-8 score: 34.4 coord: 245..307 e-value: 1.0E-8 score: 34.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 72..161 score: 11.264125
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 243..321 score: 11.298236
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 231..320 e-value: 2.4E-16 score: 61.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 68..171 e-value: 4.0E-16 score: 60.9
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 374..432 e-value: 6.8E-23 score: 82.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 512..529
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 474..529
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..41
None	No IPR available	PANTHER	PTHR10501:SF43	RNA-BINDING PROTEIN-RELATED	coord: 1..316
None	No IPR available	PANTHER	PTHR10501	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B	coord: 1..316
None	No IPR available	CDD	cd12245	RRM_scw1_like	coord: 241..319 e-value: 6.58418E-38 score: 131.943
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 374..432
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 71..307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G009650.1	CmaCh03G009650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding