Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTATCCGATGAAAAGTTCATGAGATTAAGGGTGTTAAAAATTACCTATACAATTCCTCCATTGCTCTTTGCTTAGATAGGCAGGAATTTTCATCGCTAAAGTCATTACACATTCCAAACGACCTACAGGGATCAATACTCCTGAGAGGGATTATGACATGAATTTGACAATAACAAATCACTAAAAAGATCACAATTTTATTACTTCAAAAAGCTCTAATGTTGTTTCTACATCATATAATAATCTAGGCCGGATAATCGTAAGGGAGTTCAGAGACGGAGAGATTCAGAGCATCCAAGTGCCTGAAACCGTACTTTCTAAGCACCTGATTATCAGCAAAGTTCAAAGCTTTAAGCATTCCATCCCAACAGGAACTACCAGAATACATCTGATTGTGATCCCCACTGCAAGGCTGACACCCCGTGAAGTGGGTGATAAAAGGCCTTCTCCAACCCCCTTTCCCACTTCCTGCATCTCTCAAATACTTCTCCCTAAACGCACCGTATTGCTCGCTCACCTTCTCTGCGTGCCGCCGCCGCAGCTCCCCAGCCTCCCTCTCCATCTCCGTGTACCTCTCGGTGATGTTATCAAAAGTTCCCACAATCTCCGCCCAGTACCCTTCGAAGTAATACTCCCCTTCTAAATAAATCTTGTCCCCCCATTTCTCTTTCTCCTTGTACAGTAGATAAACCAGGCCCGTCTGATCGTCCGACTCTGGGAACTGCTTGTCTGGAATCGTCGATTTGAGGACCTGGCCCCACTTCTCGTAATTTGGGGTTTGTGGGCCCATGCTGGCCCACACGTCCATGAAGTCCATGGACCACTGGCAGTTTCTGATCAGAAACACGCCGGCGTTGAGCGCCGTCCAGCTTTTCCGATCGTAAATCAGGTGGGCCCAGCCGTGGGCGACAAAGTTGTGGTTTTTATATCGATCCAGTGGGAGTTTGAATTCCATGTCGGTGAACAGAGCGTCCGAGTCCACCCACCAAATCCACTCGGCCTCTGGGTGAGCTATCATCGCAGCTCGAACCACCGGCAGCTTCGCCCAGTACGAGAACATTTCCGGGTGCAGCAGTGCATTGTTGTAGAATATATCGTAGCCGTGGATTCGGCAGTAGTCCACTTTGTTCTTGAAGAATCTCAGAAGCAAGTGATCGCCAATGGGGTTCGGGCACGGCGCAGGCTGCGACGCCGAGAGAAGAAGCACCCTCTCGCCGGCTCCGGTGGCTAA
mRNA sequence
ATGATTTATCCGATGAAAAGCCGGATAATCGTAAGGGAGTTCAGAGACGGAGAGATTCAGAGCATCCAAGTGCCTGAAACCGTACTTTCTAAGCACCTGATTATCAGCAAAGTTCAAAGCTTTAAGCATTCCATCCCAACAGGAACTACCAGAATACATCTGATTGTGATCCCCACTGCAAGGCTGACACCCCGTGAAGTGGGTGATAAAAGGCCTTCTCCAACCCCCTTTCCCACTTCCTGCATCTCTCAAATACTTCTCCCTAAACGCACCGTATTGCTCGCTCACCTTCTCTGCGTGCCGCCGCCGCAGCTCCCCAGCCTCCCTCTCCATCTCCGTGTACCTCTCGGTGATGTTATCAAAAGTTCCCACAATCTCCGCCCAGTACCCTTCGAAATAAACCAGGCCCGTCTGATCGTCCGACTCTGGGAACTGCTTGTCTGGAATCGTCGATTTGAGGACCTGGCCCCACTTCTCGTAATTTGGGGTTTGTGGGCCCATGCTGGCCCACACGTCCATGAAGTCCATGGACCACTGGCAGTTTCTGATCAGAAACACGCCGGCGTTGAGCGCCGTCCAGCTTTTCCGATCGTAAATCAGGTGGGCCCAGCCGTGGGCGACAAAGTTGTGGTTTTTATATCGATCCAGTGGGAGTTTGAATTCCATGTCGGTGAACAGAGCGTCCGAGTCCACCCACCAAATCCACTCGGCCTCTGGGTGAGCTATCATCGCAGCTCGAACCACCGGCAGCTTCGCCCAGTACGAGAACATTTCCGGGTGCAGCAGTGCATTGTTGTAGAATATATCGTAGCCGTGGATTCGGCAGTAGTCCACTTTGTTCTTGAAGAATCTCAGAAGCAAGTGATCGCCAATGGGGTTCGGGCACGGCGCAGGCTGCGACGCCGAGAGAAGAAGCACCCTCTCGCCGGCTCCGGTGGCTAA
Coding sequence (CDS)
ATGATTTATCCGATGAAAAGCCGGATAATCGTAAGGGAGTTCAGAGACGGAGAGATTCAGAGCATCCAAGTGCCTGAAACCGTACTTTCTAAGCACCTGATTATCAGCAAAGTTCAAAGCTTTAAGCATTCCATCCCAACAGGAACTACCAGAATACATCTGATTGTGATCCCCACTGCAAGGCTGACACCCCGTGAAGTGGGTGATAAAAGGCCTTCTCCAACCCCCTTTCCCACTTCCTGCATCTCTCAAATACTTCTCCCTAAACGCACCGTATTGCTCGCTCACCTTCTCTGCGTGCCGCCGCCGCAGCTCCCCAGCCTCCCTCTCCATCTCCGTGTACCTCTCGGTGATGTTATCAAAAGTTCCCACAATCTCCGCCCAGTACCCTTCGAAATAAACCAGGCCCGTCTGATCGTCCGACTCTGGGAACTGCTTGTCTGGAATCGTCGATTTGAGGACCTGGCCCCACTTCTCGTAATTTGGGGTTTGTGGGCCCATGCTGGCCCACACGTCCATGAAGTCCATGGACCACTGGCAGTTTCTGATCAGAAACACGCCGGCGTTGAGCGCCGTCCAGCTTTTCCGATCGTAAATCAGGTGGGCCCAGCCGTGGGCGACAAAGTTGTGGTTTTTATATCGATCCAGTGGGAGTTTGAATTCCATGTCGGTGAACAGAGCGTCCGAGTCCACCCACCAAATCCACTCGGCCTCTGGGTGAGCTATCATCGCAGCTCGAACCACCGGCAGCTTCGCCCAGTACGAGAACATTTCCGGGTGCAGCAGTGCATTGTTGTAGAATATATCGTAGCCGTGGATTCGGCAGTAGTCCACTTTGTTCTTGAAGAATCTCAGAAGCAAGTGATCGCCAATGGGGTTCGGGCACGGCGCAGGCTGCGACGCCGAGAGAAGAAGCACCCTCTCGCCGGCTCCGGTGGCTAA
Protein sequence
MIYPMKSRIIVREFRDGEIQSIQVPETVLSKHLIISKVQSFKHSIPTGTTRIHLIVIPTARLTPREVGDKRPSPTPFPTSCISQILLPKRTVLLAHLLCVPPPQLPSLPLHLRVPLGDVIKSSHNLRPVPFEINQARLIVRLWELLVWNRRFEDLAPLLVIWGLWAHAGPHVHEVHGPLAVSDQKHAGVERRPAFPIVNQVGPAVGDKVVVFISIQWEFEFHVGEQSVRVHPPNPLGLWVSYHRSSNHRQLRPVREHFRVQQCIVVEYIVAVDSAVVHFVLEESQKQVIANGVRARRRLRRREKKHPLAGSGG
Homology
BLAST of CmaCh03G009040 vs. ExPASy TrEMBL
Match:
A0A5A7PEJ2 (Cytochrome P450 OS=Striga asiatica OX=4170 GN=STAS_06957 PE=4 SV=1)
HSP 1 Score: 240.0 bits (611), Expect = 1.4e-59
Identity = 145/301 (48.17%), Postives = 185/301 (61.46%), Query Frame = 0
Query: 19 IQSIQVPETVLSKHLIISKVQSFKHSIPTGTTRIHLIVIPTARLTPREV---GDKRPSPT 78
I+ ++V + V ++HLII K Q H + +R+HLIV+PTARL REV G P
Sbjct: 14 IKHVRVRKPVAAEHLIIRKGQRPLHRVKARLSRVHLIVVPTARLASREVSYEGSLPAPPP 73
Query: 79 PFPTSCISQILLPKRTVLLAHLLCVPPPQLPSLPLHLRVPLGDVIKSSHNLRPVPFEI-- 138
PF Q L P+ T+ L HLL PPPQ LH V L DV++ +HNL PVPFEI
Sbjct: 74 PFSGPLHLQPLFPRLTIRLTHLLRPPPPQPRLFSLHSFVLLCDVLQRAHNLHPVPFEIVF 133
Query: 139 -NQARLIVRLWELLVWNRRFEDLAPLLVIWGLWAHAGPHVHEVHGPLAVSDQKHAGVERR 198
ARLIVRL E LV + PL+VI GLWAH GP VHEVHGPLAV+D+K AGV+
Sbjct: 134 SLHARLIVRLREYLVLEGCAQGFTPLVVIRGLWAHPGPDVHEVHGPLAVADEKDAGVDAG 193
Query: 199 PAFPIVNQVGPAVGDKVVVFISIQWEFEFHVGEQSVRVHPPNPLGLWVSYHRSSNHRQLR 258
PA + VGPAV D+VV + ++ E E HV E VRV PP+PLG V H ++
Sbjct: 194 PAL-FFDHVGPAVDDEVVGLVPVEREDEVHVREGGVRVDPPDPLGFRVGQHCGADGGGFG 253
Query: 259 PVREHFRVQQCIVVEYIVAVDSAVVHFVLEESQKQVIANGVRARRRLRRREKKHPLAGSG 314
P EH +++ +VVE + V AVVHFVLE+ Q++V+A+ V ARRRLR R + P G+G
Sbjct: 254 PEGEHLGLEEGVVVEDVDVVAPAVVHFVLEQLQEEVVADRVPARRRLRARHHEDPALGAG 313
BLAST of CmaCh03G009040 vs. ExPASy TrEMBL
Match:
K3YSQ8 (Uncharacterized protein OS=Setaria italica OX=4555 PE=4 SV=1)
HSP 1 Score: 173.3 bits (438), Expect = 1.6e-39
Identity = 113/290 (38.97%), Postives = 155/290 (53.45%), Query Frame = 0
Query: 24 VPETVLSKHLIISKVQSFKHSIPTGTTRIHLIVIPTARLTPREVGDKRPSPTPFP---TS 83
VPE V +HL++ +V+ H++ + L+ +P ARL PREV + P P P
Sbjct: 29 VPEPVRPEHLVVGEVERAAHALVAAGPGVVLVPVPAARLAPREVRHEWPPPPAHPGLRQP 88
Query: 84 CISQILLPKRTVLLAHLLC--VPPPQ--LPSLPLHLRVPLGDVIKSSHNLRPVPFE---- 143
Q +P+R V H+LC PPPQ P PLH VPL DV + H+L+PV E
Sbjct: 89 SPRQRRVPRRGV--RHVLCFRTPPPQRGRPRSPLHGLVPLRDVAEPPHDLQPVALEVVVA 148
Query: 144 ----------------INQARLIVRLWELLVWNRRFEDLAPLLVIWGLWAHAGPHVHEVH 203
+++ RL+VRL E LV R E AP V+ G+ H GP VHEV
Sbjct: 149 LQEHLLPPRAAALQQHVHERRLVVRLVEHLVLERGLEHGAPAAVVRGVGPHGGPRVHEVE 208
Query: 204 GPLAVSDQKHAGVERRPAFPIVNQVGPAVGDKVVVFISIQWEFEFHVGEQSVRVHPPNPL 263
PL V D++H VE P + ++ PAV D+VV + Q E E H+ E V VHPP+PL
Sbjct: 209 RPLTVPDEEHPRVEAGPGPGLEHKARPAVDDEVVAAVPAQGEAEVHIREHGVGVHPPHPL 268
Query: 264 GLWVSYHRSSNHRQLRPVREHFRVQQCIVVEYIVAVDSAVVHFVLEESQK 287
L V +H ++ R L PV H R +Q VV+ + AV+SAVV VL++ Q+
Sbjct: 269 RLRVRHHGGADRRYLGPVPVHRRPEQRRVVQQLHAVESAVVGLVLQQPQQ 316
BLAST of CmaCh03G009040 vs. ExPASy TrEMBL
Match:
A0A5A7PE72 (Nuclear pore complex protein Nup98-Nup96 (Fragment) OS=Striga asiatica OX=4170 GN=STAS_06958 PE=4 SV=1)
HSP 1 Score: 156.4 bits (394), Expect = 2.0e-34
Identity = 100/268 (37.31%), Postives = 145/268 (54.10%), Query Frame = 0
Query: 56 VIPTARLTPREVGDKRPSPTPFPTSCISQILLPKRTVLLAHLLCVPPPQLPSLPLHLRVP 115
V+PTARL PREV KRP P + S++ R A L VPPPQ PL LRV
Sbjct: 9 VVPTARLAPREVRHKRPPPPFWSLPSPSRVPPHLRPAATAVHLRVPPPQPLHAPLDLRVL 68
Query: 116 LGDVIKSSHNLRPVPFE------INQARLI-------VRLWELLVWNRRFEDLAPLLVIW 175
G ++ +PV E +N R + LLVW R D +P VIW
Sbjct: 69 HGYPLEFPDYPQPVTVERVLVLHVNPVRPFFIPFQKQINEGRLLVWPRGLFDPSPFRVIW 128
Query: 176 GLWAHAGPHVHEVHGPLAVSDQKHAGVERRPAFPIVNQVGPAVGDKVVVFISIQWEFEFH 235
WAH+GP+V ++HGPL VS Q V+R PA +V+ +GPA+ ++V+ + ++ E H
Sbjct: 129 ASWAHSGPNVKKIHGPLTVSYQDGPCVDRDPALLLVDHIGPAMDHQIVILVLVERNLEIH 188
Query: 236 VGEQSVRVHPPNPLGLWVSYHRSSNHRQLRPVREHFRVQQCIVVEYIVAVDSAVVHFVLE 295
+ + VR+ P PL + H ++ L P H RVQ+ +VVE + V+SAV+ FVLE
Sbjct: 189 IRKNGVRIDPKQPLHIRTGQHCGPDYGDLGPNGFHGRVQEGVVVEDLPPVNSAVIDFVLE 248
Query: 296 ESQKQVIANGVRARRRLRRREKKHPLAG 311
+++K+V++ GV AR L + +P+ G
Sbjct: 249 KAKKKVVSVGVFARAGLGTGYEHNPVLG 276
BLAST of CmaCh03G009040 vs. ExPASy TrEMBL
Match:
A0A287P4H4 (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1)
HSP 1 Score: 119.8 bits (299), Expect = 2.1e-23
Identity = 98/289 (33.91%), Postives = 140/289 (48.44%), Query Frame = 0
Query: 26 ETVLSKHLIISKVQSFKHSIPTGTTRIHLIVIPTARLTPREVGDKRPSPTPFPTSCISQI 85
E V S++L++ +V+ H++ + ++P ARL P EV D+RP +
Sbjct: 43 EPVESEYLVVGEVERALHALTAPRGLVARALLP-ARLAPDEVRDERP-----------PV 102
Query: 86 LLPKRTVLLAHLLCVPPPQLPSLPLH--LRVPLGDVIKSSHNLRPVPF-----EINQARL 145
+ R L HLL +P+H L P+ +V +L P P +++Q RL
Sbjct: 103 VAEPRPPLAPHLL---------VPVHDPLPEPVQEVGALQEHLGPPPAALRHQQVHQRRL 162
Query: 146 IVRLWELLVWNRRFEDLAPLLVIWGLWAHAGPHVHEVHGPLAVSDQKHAGVERRPAFPIV 205
+V L V R E L + HA P V EV P AV D + AGV +P V
Sbjct: 163 VVGLVGRPVGQRLREHLPVPVPHRAARPHARPRVQEVQRPPAVPDHEAAGVGSQPVPGAV 222
Query: 206 NQVGPAVGDKVVVFISIQWEFEFHVGEQSVRVHPPNPLGLWVSYHRSSNHRQLRPVREHF 265
++V PAV +VV + E HV E VRV+PP L L V +H+ + QLRP H
Sbjct: 223 HRVVPAVEQQVVPRVLAPRRLEQHVSEHHVRVYPPQELHLRVRHHQRAQQGQLRPEPRHL 282
Query: 266 RVQQCIVVEYIVAVDSAVVHFVLEESQKQVIANGVRARRRLRRREKKHP 308
VQ + VE + AVD+AVV VLE ++ V+A V A R R + +HP
Sbjct: 283 AVQHRVAVEDVEAVDAAVVRLVLERPEEHVVALRVLAPARRRAGDHEHP 310
BLAST of CmaCh03G009040 vs. ExPASy TrEMBL
Match:
A0A5J9UMT0 (Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_27167 PE=4 SV=1)
HSP 1 Score: 119.4 bits (298), Expect = 2.7e-23
Identity = 99/304 (32.57%), Postives = 146/304 (48.03%), Query Frame = 0
Query: 9 IIVREFRDGEIQSIQVPETVLSKHLIISKVQSFKHSIPTGTTRIHLIVIPTARLTPREVG 68
++ R+ G + VPE V ++HL++ +V+ H + + + A P EV
Sbjct: 52 VVERQRPHGVVPRRGVPEPVRAEHLVVGEVERGAHPAAAALRGVGRVPLAAAGRAPDEVR 111
Query: 69 DKRPSPTPFPTSCIS---------QILLPKRTVLLAHLLCVPPPQL-------------- 128
D+RP P P + + +P+R V L VPPPQ
Sbjct: 112 DERP-PPPVVAAAVGARDAAGLPPHRRVPRRRVPQVLPLRVPPPQRLVPFLDGLVPRRDA 171
Query: 129 --PSLPLH-LRVPLGDVIK-SSHN------LRPVPFEINQARLIVRLWELLVWNRRFEDL 188
P++ +H L VPL V++ +H L PV ++ + RL+ R+ +L+ + L
Sbjct: 172 GEPAVHVHVLPVPLQVVLRLDAHRVPEPAALPPVEQQVRERRLVARVVAVLLRELLPQLL 231
Query: 189 APLLVIWGL-WAHAGPHVHEVHGPLAVSDQKHAGVERRPAFPIVNQVGPAVGDKVVVFI- 248
P V+ + AH GP V EV PLAV+D+ HAGV+ +P P VG AV D+V +
Sbjct: 232 PPTRVLLRVRGAHPGPLVEEVERPLAVADEDHAGVDPQPRPPPEEPVGDAVHDEVAAGVP 291
Query: 249 SIQWEFEFHVGEQSVRVHPPNPLGLWVSYHRSSNHRQLRPVREHFRVQQCIVVEYIVAVD 278
+ E E HVGE V VHPP PL L V +H + QLRP H R+Q VV+ + V+
Sbjct: 292 RPEREGEVHVGEHGVGVHPPQPLRLRVGHHGGAQDGQLRPRPRHRRLQGVAVVDELDPVE 351
BLAST of CmaCh03G009040 vs. NCBI nr
Match:
GER30988.1 (cytochrome P450 [Striga asiatica])
HSP 1 Score: 240.0 bits (611), Expect = 2.8e-59
Identity = 145/301 (48.17%), Postives = 185/301 (61.46%), Query Frame = 0
Query: 19 IQSIQVPETVLSKHLIISKVQSFKHSIPTGTTRIHLIVIPTARLTPREV---GDKRPSPT 78
I+ ++V + V ++HLII K Q H + +R+HLIV+PTARL REV G P
Sbjct: 14 IKHVRVRKPVAAEHLIIRKGQRPLHRVKARLSRVHLIVVPTARLASREVSYEGSLPAPPP 73
Query: 79 PFPTSCISQILLPKRTVLLAHLLCVPPPQLPSLPLHLRVPLGDVIKSSHNLRPVPFEI-- 138
PF Q L P+ T+ L HLL PPPQ LH V L DV++ +HNL PVPFEI
Sbjct: 74 PFSGPLHLQPLFPRLTIRLTHLLRPPPPQPRLFSLHSFVLLCDVLQRAHNLHPVPFEIVF 133
Query: 139 -NQARLIVRLWELLVWNRRFEDLAPLLVIWGLWAHAGPHVHEVHGPLAVSDQKHAGVERR 198
ARLIVRL E LV + PL+VI GLWAH GP VHEVHGPLAV+D+K AGV+
Sbjct: 134 SLHARLIVRLREYLVLEGCAQGFTPLVVIRGLWAHPGPDVHEVHGPLAVADEKDAGVDAG 193
Query: 199 PAFPIVNQVGPAVGDKVVVFISIQWEFEFHVGEQSVRVHPPNPLGLWVSYHRSSNHRQLR 258
PA + VGPAV D+VV + ++ E E HV E VRV PP+PLG V H ++
Sbjct: 194 PAL-FFDHVGPAVDDEVVGLVPVEREDEVHVREGGVRVDPPDPLGFRVGQHCGADGGGFG 253
Query: 259 PVREHFRVQQCIVVEYIVAVDSAVVHFVLEESQKQVIANGVRARRRLRRREKKHPLAGSG 314
P EH +++ +VVE + V AVVHFVLE+ Q++V+A+ V ARRRLR R + P G+G
Sbjct: 254 PEGEHLGLEEGVVVEDVDVVAPAVVHFVLEQLQEEVVADRVPARRRLRARHHEDPALGAG 313
BLAST of CmaCh03G009040 vs. NCBI nr
Match:
KAG7034281.1 (hypothetical protein SDJN02_04008, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 200.3 bits (508), Expect = 2.5e-47
Identity = 102/107 (95.33%), Postives = 104/107 (97.20%), Query Frame = 0
Query: 10 IVREFRDGEIQSIQVPETVLSKHLIISKVQSFKHSIPTGTTRIHLIVIPTARLTPREVGD 69
I+R +DGEIQSIQVPETVLSKHLIISKVQSFKHSIPTGTTRIHLIVIPTARLTPREVGD
Sbjct: 3 ILRLHQDGEIQSIQVPETVLSKHLIISKVQSFKHSIPTGTTRIHLIVIPTARLTPREVGD 62
Query: 70 KRPSPTPFPTSCISQILLPKRTVLLAHLLCVPPPQLPSLPLHLRVPL 117
KRPSPTPFPTSCISQILLPKRTVLLAHLLCVPPPQLPSL LHLRVPL
Sbjct: 63 KRPSPTPFPTSCISQILLPKRTVLLAHLLCVPPPQLPSLSLHLRVPL 109
BLAST of CmaCh03G009040 vs. NCBI nr
Match:
KAG7034281.1 (hypothetical protein SDJN02_04008, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 60.8 bits (146), Expect = 2.3e-05
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0
Query: 283 ESQKQVIANGVRARRRLRRREKKHPLAGSGG 314
ESQKQVIANGVRARRRLRRREKKHPLAGSGG
Sbjct: 110 ESQKQVIANGVRARRRLRRREKKHPLAGSGG 140
HSP 2 Score: 156.4 bits (394), Expect = 4.1e-34
Identity = 100/268 (37.31%), Postives = 145/268 (54.10%), Query Frame = 0
Query: 56 VIPTARLTPREVGDKRPSPTPFPTSCISQILLPKRTVLLAHLLCVPPPQLPSLPLHLRVP 115
V+PTARL PREV KRP P + S++ R A L VPPPQ PL LRV
Sbjct: 9 VVPTARLAPREVRHKRPPPPFWSLPSPSRVPPHLRPAATAVHLRVPPPQPLHAPLDLRVL 68
Query: 116 LGDVIKSSHNLRPVPFE------INQARLI-------VRLWELLVWNRRFEDLAPLLVIW 175
G ++ +PV E +N R + LLVW R D +P VIW
Sbjct: 69 HGYPLEFPDYPQPVTVERVLVLHVNPVRPFFIPFQKQINEGRLLVWPRGLFDPSPFRVIW 128
Query: 176 GLWAHAGPHVHEVHGPLAVSDQKHAGVERRPAFPIVNQVGPAVGDKVVVFISIQWEFEFH 235
WAH+GP+V ++HGPL VS Q V+R PA +V+ +GPA+ ++V+ + ++ E H
Sbjct: 129 ASWAHSGPNVKKIHGPLTVSYQDGPCVDRDPALLLVDHIGPAMDHQIVILVLVERNLEIH 188
Query: 236 VGEQSVRVHPPNPLGLWVSYHRSSNHRQLRPVREHFRVQQCIVVEYIVAVDSAVVHFVLE 295
+ + VR+ P PL + H ++ L P H RVQ+ +VVE + V+SAV+ FVLE
Sbjct: 189 IRKNGVRIDPKQPLHIRTGQHCGPDYGDLGPNGFHGRVQEGVVVEDLPPVNSAVIDFVLE 248
Query: 296 ESQKQVIANGVRARRRLRRREKKHPLAG 311
+++K+V++ GV AR L + +P+ G
Sbjct: 249 KAKKKVVSVGVFARAGLGTGYEHNPVLG 276
BLAST of CmaCh03G009040 vs. NCBI nr
Match:
TVU24714.1 (hypothetical protein EJB05_27167, partial [Eragrostis curvula])
HSP 1 Score: 119.4 bits (298), Expect = 5.6e-23
Identity = 99/304 (32.57%), Postives = 146/304 (48.03%), Query Frame = 0
Query: 9 IIVREFRDGEIQSIQVPETVLSKHLIISKVQSFKHSIPTGTTRIHLIVIPTARLTPREVG 68
++ R+ G + VPE V ++HL++ +V+ H + + + A P EV
Sbjct: 52 VVERQRPHGVVPRRGVPEPVRAEHLVVGEVERGAHPAAAALRGVGRVPLAAAGRAPDEVR 111
Query: 69 DKRPSPTPFPTSCIS---------QILLPKRTVLLAHLLCVPPPQL-------------- 128
D+RP P P + + +P+R V L VPPPQ
Sbjct: 112 DERP-PPPVVAAAVGARDAAGLPPHRRVPRRRVPQVLPLRVPPPQRLVPFLDGLVPRRDA 171
Query: 129 --PSLPLH-LRVPLGDVIK-SSHN------LRPVPFEINQARLIVRLWELLVWNRRFEDL 188
P++ +H L VPL V++ +H L PV ++ + RL+ R+ +L+ + L
Sbjct: 172 GEPAVHVHVLPVPLQVVLRLDAHRVPEPAALPPVEQQVRERRLVARVVAVLLRELLPQLL 231
Query: 189 APLLVIWGL-WAHAGPHVHEVHGPLAVSDQKHAGVERRPAFPIVNQVGPAVGDKVVVFI- 248
P V+ + AH GP V EV PLAV+D+ HAGV+ +P P VG AV D+V +
Sbjct: 232 PPTRVLLRVRGAHPGPLVEEVERPLAVADEDHAGVDPQPRPPPEEPVGDAVHDEVAAGVP 291
Query: 249 SIQWEFEFHVGEQSVRVHPPNPLGLWVSYHRSSNHRQLRPVREHFRVQQCIVVEYIVAVD 278
+ E E HVGE V VHPP PL L V +H + QLRP H R+Q VV+ + V+
Sbjct: 292 RPEREGEVHVGEHGVGVHPPQPLRLRVGHHGGAQDGQLRPRPRHRRLQGVAVVDELDPVE 351
BLAST of CmaCh03G009040 vs. NCBI nr
Match:
KAB8091417.1 (hypothetical protein EE612_016890 [Oryza sativa])
HSP 1 Score: 114.4 bits (285), Expect = 1.8e-21
Identity = 75/203 (36.95%), Postives = 108/203 (53.20%), Query Frame = 0
Query: 105 LPSLPLHLRVPLGDVIKSSHNLRPVPFEINQARLIVRLWELLVWNRRFEDLAPLLVIWGL 164
+P L +HL P L +I RLI+ L + ++L L L
Sbjct: 22 IPILKVHLVTPF---------LTLCSKDIYHGRLIISLEHRPILQVLGQNLPGLNTDRAL 81
Query: 165 WAHAGPHVHEVHGPLAVSDQKHAGVERRPAFPIVNQVGPAVGDKVVVFISIQWEFEFHVG 224
W+H P + E+ PLAV+ Q+ A VE P +V+ + PAV D+VV + + W+ E HVG
Sbjct: 82 WSHWCPCIKEIKRPLAVAQQEAACVEANPVLVVVDHLIPAVHDEVVGAVPLPWQLECHVG 141
Query: 225 EQSVRVHPPNPLGLWVSYHRSSNHRQLRPVREHFRVQQCIVVEYIVAVDSAVVHFVLEES 284
E V VHPP L L V + + R+L P H V+Q VVE + AVD+AVVH VL+
Sbjct: 142 EHGVGVHPPEELDLRVREEQRAEERELGPESGHLGVEQRHVVEDLEAVDAAVVHLVLDGL 201
Query: 285 QKQVIANGVRARRRLRRREKKHP 308
++ V+A+GV AR R+++HP
Sbjct: 202 EEVVVADGVLARLGRGARDEQHP 215
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7PEJ2 | 1.4e-59 | 48.17 | Cytochrome P450 OS=Striga asiatica OX=4170 GN=STAS_06957 PE=4 SV=1 | [more] |
| K3YSQ8 | 1.6e-39 | 38.97 | Uncharacterized protein OS=Setaria italica OX=4555 PE=4 SV=1 | [more] |
| A0A5A7PE72 | 2.0e-34 | 37.31 | Nuclear pore complex protein Nup98-Nup96 (Fragment) OS=Striga asiatica OX=4170 G... | [more] |
| A0A287P4H4 | 2.1e-23 | 33.91 | Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | [more] |
| A0A5J9UMT0 | 2.7e-23 | 32.57 | Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_27167... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| GER30988.1 | 2.8e-59 | 48.17 | cytochrome P450 [Striga asiatica] | [more] |
| KAG7034281.1 | 2.5e-47 | 95.33 | hypothetical protein SDJN02_04008, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG7034281.1 | 2.3e-05 | 100.00 | hypothetical protein SDJN02_04008, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| TVU24714.1 | 5.6e-23 | 32.57 | hypothetical protein EJB05_27167, partial [Eragrostis curvula] | [more] |
| KAB8091417.1 | 1.8e-21 | 36.95 | hypothetical protein EE612_016890 [Oryza sativa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
