CmaCh03G008670 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G008670
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor bHLH25-like
Location	Cma_Chr03: 6435098 .. 6436076 (+)
RNA-Seq Expression	CmaCh03G008670
Synteny	CmaCh03G008670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGACTGTGCATATCAATACGAGATCACCAATTATCCCCATGATTACACACTCGATGAGCTCAATTTTCCGACCAATTTTCCGGCGACCGAAAAACTCATTACTTCGGTCCAACTTGATTCTATTTCCTCTTCCCAGTTTATTTCCTTTGGGGATTCACCTGAAATTGAGAAGCTTGATTGTGCGATGGGTAAGGTCGAGAGAGGAAAAGATTTGTCGTTCATAATACCCCAAAGTTTGGGTGTGAATCAAAATAGGTATGTAATTGGATATGAAGAAGGCCATGACATTAAGAAGCGTGCAACAATTGGTAGAAATTCAGGAAATGGTCAACAACATGTTATAGCTGAGAGAAGACGAAGAGAGAAGCTAAGCCAAAGCTTTGCTGCTCTTTCAGCTCTAATCCCCGGCCTCAACAAGGTAAAAATTTGCTCATAATATCCAATTGCTATGAACAAAAAAGGGTTAATCTTAGATTTTGAATTCAATGTGGTAAGTTTATGTGAAATATGAAAGGGTTAATATTTTTGGTGACAGACGGACAAGGCTTCAGTGCTTGGGGGAGCTATCAAGTACGTGAAAGAGCTTCAAGAACGTGTCAAATGGGCTGAGGAAGAAGCAGGAGATGAGGAGGGGAGAGTAATTAAATCAGTTCCTAAGATAGAAACAAGGGTTTTGGAGAGGGATGTTCTTGTGAAAATTCATTGCAAGAAACAAAAAGGCTGTTTTTCAAACATATTAACCCAAATACAGAAGCTTAAGCTAACCATTGTGAATAGCTGCGTTTTACCATTTGGGCATTCCAGACTTGATATAACCATTATTGCTCAGGTCAAATTCCTTTCTCTCTATTATCACCAAACATAATGACCTTTCATTAATATTTGCTACCTTGTTGCAGATGGAGGTTGGTTTTTGCATGACAGCCACAGATCTTGGGAACAAGCTAACACAGGCTTTGGTCGACCTCATATAA

mRNA sequence

ATGATGGACTGTGCATATCAATACGAGATCACCAATTATCCCCATGATTACACACTCGATGAGCTCAATTTTCCGACCAATTTTCCGGCGACCGAAAAACTCATTACTTCGGTCCAACTTGATTCTATTTCCTCTTCCCAGTTTATTTCCTTTGGGGATTCACCTGAAATTGAGAAGCTTGATTGTGCGATGGGTAAGGTCGAGAGAGGAAAAGATTTGTCGTTCATAATACCCCAAAGTTTGGGTGTGAATCAAAATAGGTATGTAATTGGATATGAAGAAGGCCATGACATTAAGAAGCGTGCAACAATTGGTAGAAATTCAGGAAATGGTCAACAACATGTTATAGCTGAGAGAAGACGAAGAGAGAAGCTAAGCCAAAGCTTTGCTGCTCTTTCAGCTCTAATCCCCGGCCTCAACAAGACGGACAAGGCTTCAGTGCTTGGGGGAGCTATCAAGTACGTGAAAGAGCTTCAAGAACGTGTCAAATGGGCTGAGGAAGAAGCAGGAGATGAGGAGGGGAGAGTAATTAAATCAGTTCCTAAGATAGAAACAAGGGTTTTGGAGAGGGATGTTCTTGTGAAAATTCATTGCAAGAAACAAAAAGGCTGTTTTTCAAACATATTAACCCAAATACAGAAGCTTAAGCTAACCATTGTGAATAGCTGCGTTTTACCATTTGGGCATTCCAGACTTGATATAACCATTATTGCTCAGATGGAGGTTGGTTTTTGCATGACAGCCACAGATCTTGGGAACAAGCTAACACAGGCTTTGGTCGACCTCATATAA

Coding sequence (CDS)

ATGATGGACTGTGCATATCAATACGAGATCACCAATTATCCCCATGATTACACACTCGATGAGCTCAATTTTCCGACCAATTTTCCGGCGACCGAAAAACTCATTACTTCGGTCCAACTTGATTCTATTTCCTCTTCCCAGTTTATTTCCTTTGGGGATTCACCTGAAATTGAGAAGCTTGATTGTGCGATGGGTAAGGTCGAGAGAGGAAAAGATTTGTCGTTCATAATACCCCAAAGTTTGGGTGTGAATCAAAATAGGTATGTAATTGGATATGAAGAAGGCCATGACATTAAGAAGCGTGCAACAATTGGTAGAAATTCAGGAAATGGTCAACAACATGTTATAGCTGAGAGAAGACGAAGAGAGAAGCTAAGCCAAAGCTTTGCTGCTCTTTCAGCTCTAATCCCCGGCCTCAACAAGACGGACAAGGCTTCAGTGCTTGGGGGAGCTATCAAGTACGTGAAAGAGCTTCAAGAACGTGTCAAATGGGCTGAGGAAGAAGCAGGAGATGAGGAGGGGAGAGTAATTAAATCAGTTCCTAAGATAGAAACAAGGGTTTTGGAGAGGGATGTTCTTGTGAAAATTCATTGCAAGAAACAAAAAGGCTGTTTTTCAAACATATTAACCCAAATACAGAAGCTTAAGCTAACCATTGTGAATAGCTGCGTTTTACCATTTGGGCATTCCAGACTTGATATAACCATTATTGCTCAGATGGAGGTTGGTTTTTGCATGACAGCCACAGATCTTGGGAACAAGCTAACACAGGCTTTGGTCGACCTCATATAA

Protein sequence

MMDCAYQYEITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIEKLDCAMGKVERGKDLSFIIPQSLGVNQNRYVIGYEEGHDIKKRATIGRNSGNGQQHVIAERRRREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSVPKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQMEVGFCMTATDLGNKLTQALVDLI

Homology

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BLAST of CmaCh03G008670 vs. ExPASy Swiss-Prot
Match: Q9T072 (Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 2.2e-31
Identity = 86/192 (44.79%), Postives = 111/192 (57.81%), Query Frame = 0


Query: 99  KKRATIGRNSGNGQQHVIAERRRREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKEL 158
           K+     RN  N Q H+IAER+RREKL+Q F ALSAL+PGL K DKASVLG A+K++K L
Sbjct: 138 KRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYL 197

Query: 159 QERVKWAEEEAGD---------------------------EEGRVIKSVPKIETRVLERD 218
           QERV   EE+  +                           E+G     +P+IE R  + D
Sbjct: 198 QERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDED 257

Query: 219 VLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQMEVGFCMTATDL 264
           VL+KI C+KQKG  + I+ +I+KL + I NS VL FG + LDITIIA+ E  F MT  D+
Sbjct: 258 VLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNFGPT-LDITIIAKKESDFDMTLMDV 317

[Close]

BLAST of CmaCh03G008670 vs. ExPASy Swiss-Prot
Match: Q8S3F1 (Transcription factor NAI1 OS=Arabidopsis thaliana OX=3702 GN=NAI1 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-28
Identity = 94/279 (33.69%), Postives = 134/279 (48.03%), Query Frame = 0


Query: 27  NFPATEKLITSVQLDSISSSQFISFGDSPEIEKLDCAMGKVERGKDLSFIIPQSLGVNQN 86
           N  +T    +S       +SQ ISFG SP     D     VE   + S  +     V   
Sbjct: 61  NMNSTSSSPSSSSSSGSRTSQVISFG-SP-----DTKTNPVETSLNFSNQVSMDQKVGSK 120

Query: 87  RYVI----GYEEGHDIKKRATIGRNSGNGQQHVIAERRRREKLSQSFAALSALIPGLNKT 146
           R       G  E H +K             +HV+AER+RR+KL++   ALSAL+PGL KT
Sbjct: 121 RKDCVNNGGRREPHLLK-------------EHVLAERKRRQKLNERLIALSALLPGLKKT 180

Query: 147 DKASVLGGAIKYVKELQERVKWAEEE---------------------------------- 206
           DKA+VL  AIK++K+LQERVK  EEE                                  
Sbjct: 181 DKATVLEDAIKHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSA 240

Query: 207 ------AGDEEGRVIKSVPKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNS 262
                 + DE     +++P IE RV +RD+L+++HC+K KGC   IL+ ++K +L +VNS
Sbjct: 241 ASPLSSSSDEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNS 300

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BLAST of CmaCh03G008670 vs. ExPASy Swiss-Prot
Match: Q1PF17 (Transcription factor bHLH18 OS=Arabidopsis thaliana OX=3702 GN=BHLH18 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-28
Identity = 85/194 (43.81%), Postives = 113/194 (58.25%), Query Frame = 0


Query: 99  KKRATIGRNSGNGQQHVIAERRRREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKEL 158
           K+  ++ R+  N Q H++AER+RREKL+Q F ALSALIPGL K DKASVLG AIK++K L
Sbjct: 112 KRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYL 171

Query: 159 QERVKWAEEEAGDE--EGRVI----------------------------KSVPKIETRVL 218
           QE VK  EE+  ++  E  V+                             ++P+IE RV 
Sbjct: 172 QESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVS 231

Query: 219 ERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQMEVGFCMTA 263
            +DVL+KI C+KQKG    I+ +I+KL L+I NS VLPFG +  DI+IIAQ    F M  
Sbjct: 232 GKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGPT-FDISIIAQKNNNFDMKI 291

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BLAST of CmaCh03G008670 vs. ExPASy Swiss-Prot
Match: Q1PF16 (Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-27
Identity = 74/178 (41.57%), Postives = 107/178 (60.11%), Query Frame = 0


Query: 112 QQHVIAERRRREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAG- 171
           ++HV+AER+RREKLS+ F ALSAL+PGL K DK ++L  AI  +K+LQE+++  +EE   
Sbjct: 118 KEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEA 177

Query: 172 -----------------DEEGRVI----------KSVPKIETRVLERDVLVKIHCKKQKG 231
                            DEE  +           +++P+IE ++ + D+L++I C+K KG
Sbjct: 178 TRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEKSKG 237

Query: 232 CFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQMEVGFCMT-ATDLGNKLTQALV 261
           C  NIL  I+  +L I NS VLPFG S LDIT++AQM+  F M+   DL   L  A+V
Sbjct: 238 CMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQMDKDFSMSILKDLVRNLRLAMV 295

[Close]

BLAST of CmaCh03G008670 vs. ExPASy Swiss-Prot
Match: Q9ZPY8 (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana OX=3702 GN=AIB PE=2 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 7.8e-13
Identity = 43/111 (38.74%), Postives = 69/111 (62.16%), Query Frame = 0


Query: 97  DIKKRATIGRNSGNGQQ----HVIAERRRREKLSQSFAALSALIPGLNKTDKASVLGGAI 156
           D K+    GR   NG++    HV AER+RREKL+Q F AL +++P ++K DKAS+LG AI
Sbjct: 375 DEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAI 434

Query: 157 KYVKELQERVKWAEEE-------AGDEEGRVIKSVPKIETRVLERDVLVKI 197
            Y+KELQE+VK  E+E         +     ++  P+++ + +  +V+V++
Sbjct: 435 SYIKELQEKVKIMEDERVGTDKSLSESNTITVEESPEVDIQAMNEEVVVRV 485

[Close]

BLAST of CmaCh03G008670 vs. ExPASy TrEMBL
Match: A0A6J1IJA5 (transcription factor bHLH25-like OS=Cucurbita maxima OX=3661 GN=LOC111477596 PE=4 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.3e-143
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MMDCAYQYEITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIEKL 60
           MMDCAYQYEITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIEKL
Sbjct: 14  MMDCAYQYEITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIEKL 73

Query: 61  DCAMGKVERGKDLSFIIPQSLGVNQNRYVIGYEEGHDIKKRATIGRNSGNGQQHVIAERR 120
           DCAMGKVERGKDLSFIIPQSLGVNQNRYVIGYEEGHDIKKRATIGRNSGNGQQHVIAERR
Sbjct: 74  DCAMGKVERGKDLSFIIPQSLGVNQNRYVIGYEEGHDIKKRATIGRNSGNGQQHVIAERR 133

Query: 121 RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV 180
           RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV
Sbjct: 134 RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV 193

Query: 181 PKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQM 240
           PKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQM
Sbjct: 194 PKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQM 253

Query: 241 EVGFCMTATDLGNKLTQALVDLI 264
           EVGFCMTATDLGNKLTQALVDLI
Sbjct: 254 EVGFCMTATDLGNKLTQALVDLI 276

[Close]

BLAST of CmaCh03G008670 vs. ExPASy TrEMBL
Match: A0A6J1GFR7 (transcription factor bHLH25-like OS=Cucurbita moschata OX=3662 GN=LOC111453758 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.2e-135
Identity = 249/263 (94.68%), Postives = 254/263 (96.58%), Query Frame = 0


Query: 1   MMDCAYQYEITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIEKL 60
           MMDCAYQ+EITNYPHDYTLDELNFPTNFPATEKL+TSVQLDSISSSQFISFGDSPEIEKL
Sbjct: 14  MMDCAYQHEITNYPHDYTLDELNFPTNFPATEKLLTSVQLDSISSSQFISFGDSPEIEKL 73

Query: 61  DCAMGKVERGKDLSFIIPQSLGVNQNRYVIGYEEGHDIKKRATIGRNSGNGQQHVIAERR 120
           DCAMGK ERGKDLSFIIPQSL VNQNRY IGYEEGHDI KRATIGR SGNGQQHVIAERR
Sbjct: 74  DCAMGKDERGKDLSFIIPQSLDVNQNRYAIGYEEGHDITKRATIGRTSGNGQQHVIAERR 133

Query: 121 RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV 180
           RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV
Sbjct: 134 RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV 193

Query: 181 PKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQM 240
           PKIETRVLERDVLV+IHCKKQKGCFSNILTQIQ LKLTIVNS VLPFGHSRLDITIIAQM
Sbjct: 194 PKIETRVLERDVLVRIHCKKQKGCFSNILTQIQMLKLTIVNSSVLPFGHSRLDITIIAQM 253

Query: 241 EVGFCMTATDLGNKLTQALVDLI 264
           EVGFCMTATDLGNKLTQ L++ I
Sbjct: 254 EVGFCMTATDLGNKLTQTLLEFI 276

[Close]

BLAST of CmaCh03G008670 vs. ExPASy TrEMBL
Match: A0A1S3B1X4 (transcription factor bHLH25-like OS=Cucumis melo OX=3656 GN=LOC103484897 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 2.0e-59
Identity = 155/307 (50.49%), Postives = 192/307 (62.54%), Query Frame = 0


Query: 1   MMDCAYQYE-ITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGD-SPEIE 60
           MM+C+Y+YE +   PHDYTLDEL    NFPA EK + +++    SSSQ +SFGD S EIE
Sbjct: 14  MMECSYEYERMKKCPHDYTLDEL----NFPAKEK-VNNLR----SSSQLVSFGDYSGEIE 73

Query: 61  --KLDCAMGKVERGKDLSFIIPQSLGVNQNRYVIGYEEGHDIKKR--ATI------GRN- 120
             K D                      N    +   E+GH+IKK   +TI       RN 
Sbjct: 74  NYKFD----------------------NYGNLIGSGEKGHEIKKDYCSTIIMGQLPNRNR 133

Query: 121 SGNGQQHVIAERRRREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEE 180
           + N  +HVIAERRRREK+ Q+F ALSALIPGL K DKASVLGGAI+YVKELQER+KWAEE
Sbjct: 134 NHNNSEHVIAERRRREKIRQNFIALSALIPGLIKRDKASVLGGAIEYVKELQERLKWAEE 193

Query: 181 EAG-----------------------------DEEG--RVIKSVPKIETRVLERDVLVKI 240
           EA                              DE G    ++SVP IE RVLE+DV+V+I
Sbjct: 194 EAEKQKSVIKSVVFVKRINLDSDDSENETFSLDENGDRSSVRSVPTIEIRVLEKDVMVRI 253

Query: 241 HCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQMEVGFCMTATDLGNKLT 264
           HCKK++GC+++IL+QI+KLKLTI+NSCV PFG SRLDITI+A+ME GFCMT  D+G  L 
Sbjct: 254 HCKKRQGCYTSILSQIEKLKLTILNSCVSPFGESRLDITIVAEMEAGFCMTPMDVGKNLR 289

[Close]

BLAST of CmaCh03G008670 vs. ExPASy TrEMBL
Match: A0A0A0KLM8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G497120 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-58
Identity = 157/323 (48.61%), Postives = 192/323 (59.44%), Query Frame = 0


Query: 1   MMDCAYQYE-ITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIEK 60
           MM+C+Y+YE +  YPHDYTLDEL    NFPA EK+      +S SS Q ISFGD      
Sbjct: 1   MMECSYEYERMKKYPHDYTLDEL----NFPAMEKV-----NNSRSSGQLISFGD------ 60

Query: 61  LDCAMGKVERGKDLSFIIPQSLGVNQNRYVIGY-EEGHDIKKR--ATI-------GRNSG 120
                G++E  K            +    +IG+ EE H+IKK   +TI         ++ 
Sbjct: 61  ---YSGEIENYK-----------FDDYGNLIGFEEEEHEIKKDYCSTIIMGQLPNHNHNN 120

Query: 121 NGQQHVIAERRRREKLSQSFAALSALIPGL------------------NKTDKASVLGGA 180
           N  +HVIAERRRREK+ Q+F ALSALIPGL                   K DKASVLGGA
Sbjct: 121 NNSEHVIAERRRREKIRQNFIALSALIPGLIKDHDGHTVLQVEVSVEGLKADKASVLGGA 180

Query: 181 IKYVKELQERVKWAEEEAGDEEGRVIK-------------------------------SV 240
           IK+VKELQER+KWAEE+   E+ RVIK                               SV
Sbjct: 181 IKFVKELQERLKWAEEKE-KEQKRVIKSVVFVKTINLDSDFDNETFSLDENGGRFSVRSV 240

Query: 241 PKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQM 264
           P IETRVLE+DVLV+IHCKK KGC+++I+++I+KLKLTIVNSCV PFG SRLDITIIA+M
Sbjct: 241 PTIETRVLEKDVLVRIHCKKHKGCYTSIVSEIEKLKLTIVNSCVFPFGQSRLDITIIAEM 293

[Close]

BLAST of CmaCh03G008670 vs. ExPASy TrEMBL
Match: A0A2P6RPH5 (Putative transcription factor bHLH family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0109611 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.3e-42
Identity = 112/269 (41.64%), Postives = 159/269 (59.11%), Query Frame = 0


Query: 32  EKLITSVQLDSISSSQFISF--GDSPEIEKLDC---------AMGKVERGKDLSFIIPQS 91
           + +IT  +  S +SS  ISF   +S     LDC          +G   +   +S +I Q 
Sbjct: 83  DHIITVPRASSSASSHLISFDNSNSSAYGSLDCTTTVKPKNEVLGSGGKLNSISNMISQG 142

Query: 92  LGVNQNRYVIGYEEGHDIKKRATIGRNSGNGQQHVIAERRRREKLSQSFAALSALIPGLN 151
              +          G  IK+ AT+ R+  + Q HV+AER+RREKLSQ F ALSAL+PGL 
Sbjct: 143 NSYDPQTCSPNRAYGQGIKRAATVTRSPLHAQDHVLAERKRREKLSQRFIALSALVPGLK 202

Query: 152 KTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVI----------------------- 211
           K DKASVLG AIKYVK+LQER+K  EE+A  +    +                       
Sbjct: 203 KMDKASVLGDAIKYVKQLQERMKILEEQAAKKTVESVVFVKRTQYSVDDDISSSDENFDS 262

Query: 212 ---KSVPKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDI 264
              + +P+IE RV +++VL++IHC+K+KGC +NIL++I+KL LTI+NS VLPFG+S LDI
Sbjct: 263 CSDQPLPEIEARVSDKEVLLRIHCEKKKGCLANILSEIEKLDLTILNSSVLPFGNSTLDI 322

[Close]

BLAST of CmaCh03G008670 vs. NCBI nr
Match: XP_022977221.1 (transcription factor bHLH25-like [Cucurbita maxima])

HSP 1 Score: 518.8 bits (1335), Expect = 2.6e-143
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MMDCAYQYEITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIEKL 60
           MMDCAYQYEITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIEKL
Sbjct: 14  MMDCAYQYEITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIEKL 73

Query: 61  DCAMGKVERGKDLSFIIPQSLGVNQNRYVIGYEEGHDIKKRATIGRNSGNGQQHVIAERR 120
           DCAMGKVERGKDLSFIIPQSLGVNQNRYVIGYEEGHDIKKRATIGRNSGNGQQHVIAERR
Sbjct: 74  DCAMGKVERGKDLSFIIPQSLGVNQNRYVIGYEEGHDIKKRATIGRNSGNGQQHVIAERR 133

Query: 121 RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV 180
           RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV
Sbjct: 134 RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV 193

Query: 181 PKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQM 240
           PKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQM
Sbjct: 194 PKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQM 253

Query: 241 EVGFCMTATDLGNKLTQALVDLI 264
           EVGFCMTATDLGNKLTQALVDLI
Sbjct: 254 EVGFCMTATDLGNKLTQALVDLI 276

[Close]

BLAST of CmaCh03G008670 vs. NCBI nr
Match: XP_022950748.1 (transcription factor bHLH25-like [Cucurbita moschata])

HSP 1 Score: 491.5 bits (1264), Expect = 4.5e-135
Identity = 249/263 (94.68%), Postives = 254/263 (96.58%), Query Frame = 0


Query: 1   MMDCAYQYEITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIEKL 60
           MMDCAYQ+EITNYPHDYTLDELNFPTNFPATEKL+TSVQLDSISSSQFISFGDSPEIEKL
Sbjct: 14  MMDCAYQHEITNYPHDYTLDELNFPTNFPATEKLLTSVQLDSISSSQFISFGDSPEIEKL 73

Query: 61  DCAMGKVERGKDLSFIIPQSLGVNQNRYVIGYEEGHDIKKRATIGRNSGNGQQHVIAERR 120
           DCAMGK ERGKDLSFIIPQSL VNQNRY IGYEEGHDI KRATIGR SGNGQQHVIAERR
Sbjct: 74  DCAMGKDERGKDLSFIIPQSLDVNQNRYAIGYEEGHDITKRATIGRTSGNGQQHVIAERR 133

Query: 121 RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV 180
           RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV
Sbjct: 134 RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV 193

Query: 181 PKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQM 240
           PKIETRVLERDVLV+IHCKKQKGCFSNILTQIQ LKLTIVNS VLPFGHSRLDITIIAQM
Sbjct: 194 PKIETRVLERDVLVRIHCKKQKGCFSNILTQIQMLKLTIVNSSVLPFGHSRLDITIIAQM 253

Query: 241 EVGFCMTATDLGNKLTQALVDLI 264
           EVGFCMTATDLGNKLTQ L++ I
Sbjct: 254 EVGFCMTATDLGNKLTQTLLEFI 276

[Close]

BLAST of CmaCh03G008670 vs. NCBI nr
Match: KAG6604086.1 (Transcription factor basic helix-loop-helix 25, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 491.1 bits (1263), Expect = 5.9e-135
Identity = 249/263 (94.68%), Postives = 254/263 (96.58%), Query Frame = 0


Query: 1   MMDCAYQYEITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIEKL 60
           MMDCAYQ+EITNYPHDYTLDELNFPTN PATEKLITSVQLDSISSSQFISFGDSPEIEKL
Sbjct: 14  MMDCAYQHEITNYPHDYTLDELNFPTNLPATEKLITSVQLDSISSSQFISFGDSPEIEKL 73

Query: 61  DCAMGKVERGKDLSFIIPQSLGVNQNRYVIGYEEGHDIKKRATIGRNSGNGQQHVIAERR 120
           DCAMGK ERGKDLSFIIPQS  VNQNRYVIGYEEGHDIKKRATIGR SGNGQQHVIAERR
Sbjct: 74  DCAMGKDERGKDLSFIIPQSFDVNQNRYVIGYEEGHDIKKRATIGRTSGNGQQHVIAERR 133

Query: 121 RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV 180
           RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV
Sbjct: 134 RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV 193

Query: 181 PKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQM 240
           PKIETRVLERDVLV+IHCKKQKGCFSNILTQIQ LKLTIVN+ VLPFGHSRLDITIIAQM
Sbjct: 194 PKIETRVLERDVLVRIHCKKQKGCFSNILTQIQMLKLTIVNTSVLPFGHSRLDITIIAQM 253

Query: 241 EVGFCMTATDLGNKLTQALVDLI 264
           EVGFCMTATDLGNKLTQ L++ I
Sbjct: 254 EVGFCMTATDLGNKLTQTLLEFI 276

[Close]

BLAST of CmaCh03G008670 vs. NCBI nr
Match: KAG7034250.1 (Transcription factor bHLH25, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 450.3 bits (1157), Expect = 1.2e-122
Identity = 229/239 (95.82%), Postives = 232/239 (97.07%), Query Frame = 0


Query: 1   MMDCAYQYEITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIEKL 60
           MMDCAYQ+EITNYPHDYTLDELNFPTN PATEKLITSVQLDSISSSQFISFGDSPEIEKL
Sbjct: 39  MMDCAYQHEITNYPHDYTLDELNFPTNLPATEKLITSVQLDSISSSQFISFGDSPEIEKL 98

Query: 61  DCAMGKVERGKDLSFIIPQSLGVNQNRYVIGYEEGHDIKKRATIGRNSGNGQQHVIAERR 120
           DCAMGK ERGKDLSFIIPQS  VNQNRYVIGYEEGHDIKKRATIGR SGNGQQHVIAERR
Sbjct: 99  DCAMGKDERGKDLSFIIPQSFDVNQNRYVIGYEEGHDIKKRATIGRTSGNGQQHVIAERR 158

Query: 121 RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV 180
           RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV
Sbjct: 159 RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV 218

Query: 181 PKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQ 240
           PKIETRVLERDVLV+IHCKKQKGCFSNILTQIQ LKLTIVN+ VLPFGHSRLDITIIAQ
Sbjct: 219 PKIETRVLERDVLVRIHCKKQKGCFSNILTQIQMLKLTIVNTSVLPFGHSRLDITIIAQ 277

[Close]

BLAST of CmaCh03G008670 vs. NCBI nr
Match: XP_023543370.1 (transcription factor bHLH25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 436.8 bits (1122), Expect = 1.3e-118
Identity = 228/263 (86.69%), Postives = 234/263 (88.97%), Query Frame = 0


Query: 1   MMDCAYQYEITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIEKL 60
           MM+ AYQ+EITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIE L
Sbjct: 14  MMESAYQHEITNYPHDYTLDELNFPTNFPATEKLITSVQLDSISSSQFISFGDSPEIENL 73

Query: 61  DCAMGKVERGKDLSFIIPQSLGVNQNRYVIGYEEGHDIKKRATIGRNSGNGQQHVIAERR 120
           D                     VNQNRYVIGYEEGH+IKKRATIGR SGNGQQHVIAERR
Sbjct: 74  D---------------------VNQNRYVIGYEEGHEIKKRATIGRTSGNGQQHVIAERR 133

Query: 121 RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAGDEEGRVIKSV 180
           RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVK+LQERVKWAEEEAGDEEGRVIKSV
Sbjct: 134 RREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKDLQERVKWAEEEAGDEEGRVIKSV 193

Query: 181 PKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQM 240
           P IETRVLE DVLV+IHCKKQKGCFSNI+TQIQ LKLTIVNSCVLPFGHSRLDITIIAQM
Sbjct: 194 PNIETRVLESDVLVRIHCKKQKGCFSNIITQIQMLKLTIVNSCVLPFGHSRLDITIIAQM 253

Query: 241 EVGFCMTATDLGNKLTQALVDLI 264
           EVGFCMTATDLG KLTQ LVDLI
Sbjct: 254 EVGFCMTATDLGKKLTQTLVDLI 255

[Close]

BLAST of CmaCh03G008670 vs. TAIR 10
Match: AT4G37850.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-32
Identity = 86/192 (44.79%), Postives = 111/192 (57.81%), Query Frame = 0


Query: 99  KKRATIGRNSGNGQQHVIAERRRREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKEL 158
           K+     RN  N Q H+IAER+RREKL+Q F ALSAL+PGL K DKASVLG A+K++K L
Sbjct: 138 KRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYL 197

Query: 159 QERVKWAEEEAGD---------------------------EEGRVIKSVPKIETRVLERD 218
           QERV   EE+  +                           E+G     +P+IE R  + D
Sbjct: 198 QERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDED 257

Query: 219 VLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQMEVGFCMTATDL 264
           VL+KI C+KQKG  + I+ +I+KL + I NS VL FG + LDITIIA+ E  F MT  D+
Sbjct: 258 VLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNFGPT-LDITIIAKKESDFDMTLMDV 317

[Close]

BLAST of CmaCh03G008670 vs. TAIR 10
Match: AT2G22770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 128.6 bits (322), Expect = 7.2e-30
Identity = 94/279 (33.69%), Postives = 134/279 (48.03%), Query Frame = 0


Query: 27  NFPATEKLITSVQLDSISSSQFISFGDSPEIEKLDCAMGKVERGKDLSFIIPQSLGVNQN 86
           N  +T    +S       +SQ ISFG SP     D     VE   + S  +     V   
Sbjct: 61  NMNSTSSSPSSSSSSGSRTSQVISFG-SP-----DTKTNPVETSLNFSNQVSMDQKVGSK 120

Query: 87  RYVI----GYEEGHDIKKRATIGRNSGNGQQHVIAERRRREKLSQSFAALSALIPGLNKT 146
           R       G  E H +K             +HV+AER+RR+KL++   ALSAL+PGL KT
Sbjct: 121 RKDCVNNGGRREPHLLK-------------EHVLAERKRRQKLNERLIALSALLPGLKKT 180

Query: 147 DKASVLGGAIKYVKELQERVKWAEEE---------------------------------- 206
           DKA+VL  AIK++K+LQERVK  EEE                                  
Sbjct: 181 DKATVLEDAIKHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSA 240

Query: 207 ------AGDEEGRVIKSVPKIETRVLERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNS 262
                 + DE     +++P IE RV +RD+L+++HC+K KGC   IL+ ++K +L +VNS
Sbjct: 241 ASPLSSSSDEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNS 300

[Close]

BLAST of CmaCh03G008670 vs. TAIR 10
Match: AT2G22750.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 9.4e-30
Identity = 85/194 (43.81%), Postives = 113/194 (58.25%), Query Frame = 0


Query: 99  KKRATIGRNSGNGQQHVIAERRRREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKEL 158
           K+  ++ R+  N Q H++AER+RREKL+Q F ALSALIPGL K DKASVLG AIK++K L
Sbjct: 112 KRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYL 171

Query: 159 QERVKWAEEEAGDE--EGRVI----------------------------KSVPKIETRVL 218
           QE VK  EE+  ++  E  V+                             ++P+IE RV 
Sbjct: 172 QESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVS 231

Query: 219 ERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQMEVGFCMTA 263
            +DVL+KI C+KQKG    I+ +I+KL L+I NS VLPFG +  DI+IIAQ    F M  
Sbjct: 232 GKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGPT-FDISIIAQKNNNFDMKI 291

[Close]

BLAST of CmaCh03G008670 vs. TAIR 10
Match: AT2G22750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-28
Identity = 85/194 (43.81%), Postives = 113/194 (58.25%), Query Frame = 0


Query: 99  KKRATIGRNSGNGQQHVIAERRRREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKEL 158
           K+  ++ R+  N Q H++AER+RREKL+Q F ALSALIPGL K DKASVLG AIK++K L
Sbjct: 112 KRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYL 171

Query: 159 QERVKWAEEEAGDE--EGRVI----------------------------KSVPKIETRVL 218
           QE VK  EE+  ++  E  V+                             ++P+IE RV 
Sbjct: 172 QESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVS 231

Query: 219 ERDVLVKIHCKKQKGCFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQMEVGFCMTA 263
            +DVL+KI C+KQKG    I+ +I+KL L+I NS VLPFG +  DI+IIAQ    F M  
Sbjct: 232 GKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGPT-FDISIIAQNN-NFDMKI 291

[Close]

BLAST of CmaCh03G008670 vs. TAIR 10
Match: AT2G22760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-28
Identity = 74/178 (41.57%), Postives = 107/178 (60.11%), Query Frame = 0


Query: 112 QQHVIAERRRREKLSQSFAALSALIPGLNKTDKASVLGGAIKYVKELQERVKWAEEEAG- 171
           ++HV+AER+RREKLS+ F ALSAL+PGL K DK ++L  AI  +K+LQE+++  +EE   
Sbjct: 118 KEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEA 177

Query: 172 -----------------DEEGRVI----------KSVPKIETRVLERDVLVKIHCKKQKG 231
                            DEE  +           +++P+IE ++ + D+L++I C+K KG
Sbjct: 178 TRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEKSKG 237

Query: 232 CFSNILTQIQKLKLTIVNSCVLPFGHSRLDITIIAQMEVGFCMT-ATDLGNKLTQALV 261
           C  NIL  I+  +L I NS VLPFG S LDIT++AQM+  F M+   DL   L  A+V
Sbjct: 238 CMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQMDKDFSMSILKDLVRNLRLAMV 295

The following BLAST results are available for this feature:

BLAST of CmaCh03G008670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T072	2.2e-31	44.79	Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2	[more]
Q8S3F1	1.0e-28	33.69	Transcription factor NAI1 OS=Arabidopsis thaliana OX=3702 GN=NAI1 PE=2 SV=1	[more]
Q1PF17	1.3e-28	43.81	Transcription factor bHLH18 OS=Arabidopsis thaliana OX=3702 GN=BHLH18 PE=1 SV=1	[more]
Q1PF16	1.9e-27	41.57	Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1	[more]
Q9ZPY8	7.8e-13	38.74	Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of CmaCh03G008670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IJA5	1.3e-143	100.00	transcription factor bHLH25-like OS=Cucurbita maxima OX=3661 GN=LOC111477596 PE=...	[more]
A0A6J1GFR7	2.2e-135	94.68	transcription factor bHLH25-like OS=Cucurbita moschata OX=3662 GN=LOC111453758 P...	[more]
A0A1S3B1X4	2.0e-59	50.49	transcription factor bHLH25-like OS=Cucumis melo OX=3656 GN=LOC103484897 PE=4 SV...	[more]
A0A0A0KLM8	1.3e-58	48.61	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G497120 PE=4 S...	[more]
A0A2P6RPH5	1.3e-42	41.64	Putative transcription factor bHLH family OS=Rosa chinensis OX=74649 GN=RchiOBHm...	[more]

BLAST of CmaCh03G008670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977221.1	2.6e-143	100.00	transcription factor bHLH25-like [Cucurbita maxima]	[more]
XP_022950748.1	4.5e-135	94.68	transcription factor bHLH25-like [Cucurbita moschata]	[more]
KAG6604086.1	5.9e-135	94.68	Transcription factor basic helix-loop-helix 25, partial [Cucurbita argyrosperma ...	[more]
KAG7034250.1	1.2e-122	95.82	Transcription factor bHLH25, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_023543370.1	1.3e-118	86.69	transcription factor bHLH25-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh03G008670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37850.1	1.5e-32	44.79	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22770.1	7.2e-30	33.69	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22750.2	9.4e-30	43.81	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22750.1	1.4e-28	43.81	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22760.1	1.4e-28	41.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 155..175
None	No IPR available	PANTHER	PTHR45959:SF36	TRANSCRIPTION FACTOR NAI1	coord: 176..262
None	No IPR available	PANTHER	PTHR45959:SF36	TRANSCRIPTION FACTOR NAI1	coord: 30..170
None	No IPR available	PANTHER	PTHR45959	BHLH TRANSCRIPTION FACTOR	coord: 176..262
None	No IPR available	PANTHER	PTHR45959	BHLH TRANSCRIPTION FACTOR	coord: 30..170
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 115..164 e-value: 1.1E-14 score: 64.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 113..159 e-value: 1.7E-10 score: 40.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 109..158 score: 15.129039
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 106..168 e-value: 8.0E-15 score: 56.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 108..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G008670.1	CmaCh03G008670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity