
CmaCh03G008590 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACAAAAAACGAATCAGAAGAAGACAAAGCAGACTTCCTTTTTCTTTTGTTTTCTTTATTGGTGAGTGCAAAGAGCGGCAGAGACGCACCCAACACGCAGCTGGGCTCCATATCATTTCATTTTCCGTACTCACCTGTACCTTTTCCATTGTACACACTACTTTTCTTCTTCCTCTGTTTTCCATTATAAATCCCCCAAATGCGCCTCCTCTTTTCTCATTCCTCCTCGTTTCTTCTCTTCCTTCTCTTCCTTCCTTCCCCATTTTCCCATTCCTGATTCCTTCTCCCAACACATGACACATTCCACATGGAGAGCCCCGATTTCTCACCGCCTCACGCCGACGCATCCAGACCCTCCTTAGCCTTTCCTCTCGGCACTGCTCTCCTCCTCCTCGTTATCTTCACCTTGAGCGGAATCTTCTCCTGCTGCTATCACTGGGACAAACTCAGATCCCTCCGCCGCTCCGCTTCCCAATTTAACCCTACCTCTCCCTCCAAATTTACCCCTACTTCTCTCGTAAGTTCGTGCCTCTTTCTTTTCTTCCCTTTCTTTTTTCCAGTTTTGATTGCACAAACCATCAATTAATCTTTTTTTCTCTGGAGCAGGATTTGGAGAAGAATCAGAGAGACAGCTTATCGGTGATGATGCCCGGGGATTCCATTCCCAAGTTCATTGCGATGCCGTGCCCCAGGGAGCCGCCACGCCCGGAGATGGTCGAGGTAAAAGTGGAGAAACCGCCGAAGCCGCCGCCGCCGCGAATTGCGGTTCCTTTCTATTAGCACACTAAGATTCCTCATTGATTGATCTGTGTACATTGGGAAAAGCAAATGAATTCTTTCCAATTTCATCTGTTATCTTCCCTTGCTAAAGGCAATTTCAATTTCTATAATCCGCCAAATAGAATTAAAATTGTTTTCTTTTATAAGGTTAGATATATTTGAAAGATGTAATAACGTTTGTGGCCTAAGAATGATGGGTTTTTCACTCTTTACCGCTATGCTTCACTTTCTATAATCCGCCAAATAAAATTAAAATTGTTTTTCCTTCTACAATCATTACTCCTTGACCTTCCAGCATATAATTAGCCCTTAATTCAAATTAATCTCGTATATAACAAATAACAGGATGTACATATGTATAAACCAAAGATGTGACAAATAAAATTTTGAAACTGGGGCCTTCATTTCTATTTTTCTTTCTTTCTTTCTTATTTAATTTTAGACGTAACTCAAATTATCCTCATTAAATCATTACACTAGAGACAGC AAAACAAAAAACGAATCAGAAGAAGACAAAGCAGACTTCCTTTTTCTTTTGTTTTCTTTATTGGTGAGTGCAAAGAGCGGCAGAGACGCACCCAACACGCAGCTGGGCTCCATATCATTTCATTTTCCGTACTCACCTGTACCTTTTCCATTGTACACACTACTTTTCTTCTTCCTCTGTTTTCCATTATAAATCCCCCAAATGCGCCTCCTCTTTTCTCATTCCTCCTCGTTTCTTCTCTTCCTTCTCTTCCTTCCTTCCCCATTTTCCCATTCCTGATTCCTTCTCCCAACACATGACACATTCCACATGGAGAGCCCCGATTTCTCACCGCCTCACGCCGACGCATCCAGACCCTCCTTAGCCTTTCCTCTCGGCACTGCTCTCCTCCTCCTCGTTATCTTCACCTTGAGCGGAATCTTCTCCTGCTGCTATCACTGGGACAAACTCAGATCCCTCCGCCGCTCCGCTTCCCAATTTAACCCTACCTCTCCCTCCAAATTTACCCCTACTTCTCTCGATTTGGAGAAGAATCAGAGAGACAGCTTATCGGTGATGATGCCCGGGGATTCCATTCCCAAGTTCATTGCGATGCCGTGCCCCAGGGAGCCGCCACGCCCGGAGATGGTCGAGGTAAAAGTGGAGAAACCGCCGAAGCCGCCGCCGCCGCGAATTGCGGTTCCTTTCTATTAGCACACTAAGATTCCTCATTGATTGATCTGTGTACATTGGGAAAAGCAAATGAATTCTTTCCAATTTCATCTGTTATCTTCCCTTGCTAAAGGCAATTTCAATTTCTATAATCCGCCAAATAGAATTAAAATTGTTTTCTTTTATAAGGTTAGATATATTTGAAAGATGTAATAACGTTTGTGGCCTAAGAATGATGGGTTTTTCACTCTTTACCGCTATGCTTCACTTTCTATAATCCGCCAAATAAAATTAAAATTGTTTTTCCTTCTACAATCATTACTCCTTGACCTTCCAGCATATAATTAGCCCTTAATTCAAATTAATCTCGTATATAACAAATAACAGGATGTACATATGTATAAACCAAAGATGTGACAAATAAAATTTTGAAACTGGGGCCTTCATTTCTATTTTTCTTTCTTTCTTTCTTATTTAATTTTAGACGTAACTCAAATTATCCTCATTAAATCATTACACTAGAGACAGC ATGGAGAGCCCCGATTTCTCACCGCCTCACGCCGACGCATCCAGACCCTCCTTAGCCTTTCCTCTCGGCACTGCTCTCCTCCTCCTCGTTATCTTCACCTTGAGCGGAATCTTCTCCTGCTGCTATCACTGGGACAAACTCAGATCCCTCCGCCGCTCCGCTTCCCAATTTAACCCTACCTCTCCCTCCAAATTTACCCCTACTTCTCTCGATTTGGAGAAGAATCAGAGAGACAGCTTATCGGTGATGATGCCCGGGGATTCCATTCCCAAGTTCATTGCGATGCCGTGCCCCAGGGAGCCGCCACGCCCGGAGATGGTCGAGGTAAAAGTGGAGAAACCGCCGAAGCCGCCGCCGCCGCGAATTGCGGTTCCTTTCTATTAG MESPDFSPPHADASRPSLAFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQFNPTSPSKFTPTSLDLEKNQRDSLSVMMPGDSIPKFIAMPCPREPPRPEMVEVKVEKPPKPPPPRIAVPFY Homology
BLAST of CmaCh03G008590 vs. ExPASy Swiss-Prot
Match: Q9LSK9 (Uncharacterized protein At5g65660 OS=Arabidopsis thaliana OX=3702 GN=At5g65660 PE=2 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.3e-34 Identity = 78/131 (59.54%), Postives = 94/131 (71.76%), Query Frame = 0
BLAST of CmaCh03G008590 vs. ExPASy TrEMBL
Match: A0A6J1IPP8 (uncharacterized protein At5g65660-like OS=Cucurbita maxima OX=3661 GN=LOC111478811 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CmaCh03G008590 vs. ExPASy TrEMBL
Match: A0A6J1GCM8 (uncharacterized protein At5g65660-like OS=Cucurbita moschata OX=3662 GN=LOC111452993 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 2.9e-61 Identity = 124/126 (98.41%), Postives = 124/126 (98.41%), Query Frame = 0
BLAST of CmaCh03G008590 vs. ExPASy TrEMBL
Match: A0A6J1BVL2 (uncharacterized protein At5g65660 OS=Momordica charantia OX=3673 GN=LOC111005755 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 4.5e-54 Identity = 114/131 (87.02%), Postives = 118/131 (90.08%), Query Frame = 0
BLAST of CmaCh03G008590 vs. ExPASy TrEMBL
Match: A0A6J1HHX0 (uncharacterized protein At5g65660-like OS=Cucurbita moschata OX=3662 GN=LOC111463125 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 7.3e-52 Identity = 109/134 (81.34%), Postives = 118/134 (88.06%), Query Frame = 0
BLAST of CmaCh03G008590 vs. ExPASy TrEMBL
Match: A0A6J1KQE2 (uncharacterized protein At5g65660-like OS=Cucurbita maxima OX=3661 GN=LOC111497312 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.6e-51 Identity = 108/134 (80.60%), Postives = 118/134 (88.06%), Query Frame = 0
BLAST of CmaCh03G008590 vs. NCBI nr
Match: XP_022979056.1 (uncharacterized protein At5g65660-like [Cucurbita maxima]) HSP 1 Score: 255.4 bits (651), Expect = 2.6e-64 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CmaCh03G008590 vs. NCBI nr
Match: XP_023543383.1 (uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 246.9 bits (629), Expect = 9.4e-62 Identity = 125/127 (98.43%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of CmaCh03G008590 vs. NCBI nr
Match: XP_022949671.1 (uncharacterized protein At5g65660-like [Cucurbita moschata]) HSP 1 Score: 244.2 bits (622), Expect = 6.1e-61 Identity = 124/126 (98.41%), Postives = 124/126 (98.41%), Query Frame = 0
BLAST of CmaCh03G008590 vs. NCBI nr
Match: KAG6604078.1 (hypothetical protein SDJN03_04687, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034244.1 hypothetical protein SDJN02_03971, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 241.5 bits (615), Expect = 3.9e-60 Identity = 123/125 (98.40%), Postives = 123/125 (98.40%), Query Frame = 0
BLAST of CmaCh03G008590 vs. NCBI nr
Match: XP_022133072.1 (uncharacterized protein At5g65660 [Momordica charantia]) HSP 1 Score: 220.3 bits (560), Expect = 9.4e-54 Identity = 114/131 (87.02%), Postives = 118/131 (90.08%), Query Frame = 0
BLAST of CmaCh03G008590 vs. TAIR 10
Match: AT5G65660.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 146.4 bits (368), Expect = 1.6e-35 Identity = 78/131 (59.54%), Postives = 94/131 (71.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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