CmaCh03G008540 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G008540
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	MADS-box transcription factor 23-like
Location	Cma_Chr03: 6379767 .. 6381456 (+)
RNA-Seq Expression	CmaCh03G008540
Synteny	CmaCh03G008540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCGAGGGAAGATTGTGATAAGAAGGATCGATAATTCAGCGAGCAGACAAGTGACCTTCTCCAAGAGGAGGAAGGGACTTATTAAAAAGGCTAAAGAGCTCTCTATTCTCTGCGATGCCGAAGTTGCTCTCATTATCTTCTCCAGCTCTGGCAAACAGTATGAATTTGCAAGCACTAGGTTCGCCCTCTTTTCTATCTTCATTTCCCTTCAAAATAATCTCGACATCTTAATCTTTCAGCTCTGCTCGTCTTCGTATCTGTATTTCCGTTCTACTTATTAAGAAATCCAGTGGAAAGAAATTTAAATTTTAGTTTGAGATTTGTTTTGGTCAGCATAGAGTCGGTAATTGAGAAATATAACAGACGAAAGGAGGAAGATGAACTGCTGTTGAATCCAATTTCTGATGTCAAGGTATACATATGAATACATCCACCATCAATCCAACTTTTTCTTGCTCTCTTTCTCCATTATATGCATAGTTTCATATTCGTGATAGGTGATATTCTGCTTAAGATTTACTCGATTCCTTCTTGAAAAATTACGTACCATAGATTTGAAATTTGTTTACACAACTAACAACTAATATATACAAAATCCTAATTACTTCTCTCCCACTGGCCTACTTGAATAATTTCGGTTCTAATATAATTGCTTGGTTAAATTATAAGTTTAGTCCGGTGTACGTAAAAGGTTATAAAGTTTAGAAAGTTTTTGAATAAGTTGCTTGTTCTATCATATTAGAAATTTTAAAAATTATTGATATATTAAGACATACAACTAAACATCTTGTTACACTGAAAGTTATGGCAGAAGGAAGTATCAGGTCTAAGGCAACAACTACTTAACTTGCAGGAGAATAATAGGTAACTAATTACCTTCTTATTAGAAAATTTGGTTGTTGTATTGAATGATTAATTATGTTGTAACAAATGCCTAAAAATGCTAAATGTAATTAATATTTTTTGTATACAGGAAATTAATGGGGGAGCAACTCTATGGTTTGTCAATTAAAGACCTAAACAGTCTCGAGAGCCAATTAGAGTTCAGCTTACAAAGCATCCGAATTAAAAAGGTCAGATATTTATTTACTTGTGCAATTACTTCATTAACCTAAGTATGAAATGCTTGAAACGATGAACAAAGTGATATGTGCCCAGTTTTTATATCAACCCATTTTTGCATTCTTAAATCATGTGAAATTGACCTGGGTTTAATATTAATAGGAATTTCTGTGTTGCAAGCAGGAACAGATATTACACGATGAAATAAAAGAATTGAACAGAAAGGTAAAAGGAAAAAGATTGTTGGTTTTCATGAGAGCCTTAAACGAGTAACAAAACTTGGGTAATTCTTCTCCGTCAACATTTGCAGGGAATTCTGATGCACCAACAAAATGTAGAGCTGGCCAATAAAGTAAACCTCTTTTGTCAAGAAAACATGGAATTGCACAGAAAGGTATCTCTCTCAAACAAAGCCTCAACCAATTGATTCCATAAATCATTGTGATAATTAGTTCCTAATCTCTGCAGGTTTACGGGCATGATTCAAGATTAGAGATGAGCGTGGCCACCGGAAACCCGTTGATCCCGTATGGTATTATCAGCGCCGCCGCCGCTGGCCCAATTGGAGGCGATGCCGGCCTGCGTGTGCCAATCCACCTTCAGCTCAGCCCGCGGGAGCAATGA

mRNA sequence

ATGGGTCGAGGGAAGATTGTGATAAGAAGGATCGATAATTCAGCGAGCAGACAAGTGACCTTCTCCAAGAGGAGGAAGGGACTTATTAAAAAGGCTAAAGAGCTCTCTATTCTCTGCGATGCCGAAGTTGCTCTCATTATCTTCTCCAGCTCTGGCAAACAGTATGAATTTGCAAGCACTAGCATAGAGTCGGTAATTGAGAAATATAACAGACGAAAGGAGGAAGATGAACTGCTGTTGAATCCAATTTCTGATGTCAAGTTATGGCAGAAGGAAGTATCAGGTCTAAGGCAACAACTACTTAACTTGCAGGAGAATAATAGGAAATTAATGGGGGAGCAACTCTATGGTTTGTCAATTAAAGACCTAAACAGTCTCGAGAGCCAATTAGAGTTCAGCTTACAAAGCATCCGAATTAAAAAGGAACAGATATTACACGATGAAATAAAAGAATTGAACAGAAAGGGAATTCTGATGCACCAACAAAATGTAGAGCTGGCCAATAAAGTAAACCTCTTTTGTCAAGAAAACATGGAATTGCACAGAAAGGTTTACGGGCATGATTCAAGATTAGAGATGAGCGTGGCCACCGGAAACCCGTTGATCCCGTATGGTATTATCAGCGCCGCCGCCGCTGGCCCAATTGGAGGCGATGCCGGCCTGCGTGTGCCAATCCACCTTCAGCTCAGCCCGCGGGAGCAATGA

Coding sequence (CDS)

ATGGGTCGAGGGAAGATTGTGATAAGAAGGATCGATAATTCAGCGAGCAGACAAGTGACCTTCTCCAAGAGGAGGAAGGGACTTATTAAAAAGGCTAAAGAGCTCTCTATTCTCTGCGATGCCGAAGTTGCTCTCATTATCTTCTCCAGCTCTGGCAAACAGTATGAATTTGCAAGCACTAGCATAGAGTCGGTAATTGAGAAATATAACAGACGAAAGGAGGAAGATGAACTGCTGTTGAATCCAATTTCTGATGTCAAGTTATGGCAGAAGGAAGTATCAGGTCTAAGGCAACAACTACTTAACTTGCAGGAGAATAATAGGAAATTAATGGGGGAGCAACTCTATGGTTTGTCAATTAAAGACCTAAACAGTCTCGAGAGCCAATTAGAGTTCAGCTTACAAAGCATCCGAATTAAAAAGGAACAGATATTACACGATGAAATAAAAGAATTGAACAGAAAGGGAATTCTGATGCACCAACAAAATGTAGAGCTGGCCAATAAAGTAAACCTCTTTTGTCAAGAAAACATGGAATTGCACAGAAAGGTTTACGGGCATGATTCAAGATTAGAGATGAGCGTGGCCACCGGAAACCCGTTGATCCCGTATGGTATTATCAGCGCCGCCGCCGCTGGCCCAATTGGAGGCGATGCCGGCCTGCGTGTGCCAATCCACCTTCAGCTCAGCCCGCGGGAGCAATGA

Protein sequence

MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFASTSIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSIKDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMELHRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ

Homology

[Close]

BLAST of CmaCh03G008540 vs. ExPASy Swiss-Prot
Match: Q6EP49 (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS27 PE=2 SV=2)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-61
Identity = 121/200 (60.50%), Postives = 162/200 (81.00%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNS SRQVTFSKRR G+ KKAKEL+ILCDAEV L+IFSS+G+ YE++ST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           S++SVI++Y + K+E + + NP S++K WQ+E + LRQQL NLQEN+R+LMGE L GL++
Sbjct: 61  SMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNV 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           K+L SLE+QLE SL+S+R KK+ +L DEI ELNRKG L+HQ+N+EL  K++L  QEN EL
Sbjct: 121 KELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLIRQENAEL 180

Query: 181 HRKVYGHDSRLEMSVATGNP 201
           ++K+Y  +   E++  +  P
Sbjct: 181 YKKIYETEGPSEVNRDSPTP 200

[Close]

BLAST of CmaCh03G008540 vs. ExPASy Swiss-Prot
Match: Q9SZJ6 (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana OX=3702 GN=AGL21 PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.8e-60
Identity = 120/185 (64.86%), Postives = 158/185 (85.41%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVI+RID+S SRQVTFSKRRKGLIKKAKEL+ILCDAEV LIIFSS+GK Y+FAS+
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           S++SVI++YN+ K E + LLNP S+VK WQ+E + LRQ+L  LQEN+R++MGEQL GLS+
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
            +LNSLE+Q+E SL+ IR++KEQ+L  EI+EL++K  L+HQ+N++L+ KV    QEN+EL
Sbjct: 121 NELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVEL 180

Query: 181 HRKVY 186
           ++K Y
Sbjct: 181 YKKAY 185

[Close]

BLAST of CmaCh03G008540 vs. ExPASy Swiss-Prot
Match: Q38840 (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana OX=3702 GN=AGL17 PE=1 SV=2)

HSP 1 Score: 223.8 bits (569), Expect = 2.1e-57
Identity = 117/186 (62.90%), Postives = 153/186 (82.26%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVI++ID+S SRQVTFSKRRKGLIKKAKEL+ILCDAEV LIIFS++ K Y+FAS+
Sbjct: 1   MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           S++S IE++N  K E++ L+NP S+VK WQ+E   LRQ+L +LQEN R+L G +L GLS+
Sbjct: 61  SVKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSV 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           K+L ++ESQLE SL+ IR+K+EQIL +EIKEL RK  L+H +N+EL+ KV    QEN+EL
Sbjct: 121 KELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQENVEL 180

Query: 181 HRKVYG 187
           ++K YG
Sbjct: 181 YKKAYG 186

[Close]

BLAST of CmaCh03G008540 vs. ExPASy Swiss-Prot
Match: A2RVQ5 (Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana OX=3702 GN=AGL16 PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55
Identity = 117/207 (56.52%), Postives = 164/207 (79.23%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKI I+RI+NS SRQVTFSKRR GL+KKAKEL+ILCDAEV +IIFSS+G+ Y+F+S+
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           S++SVIE+Y+  K E     +P S+++ WQKE + L++QL NLQEN+R++MGE+L GLS+
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           + L +LE+QLE SL+ +R+KK+Q+L +EI+ LNR+G L+HQ+N++L  KVNL  Q+NMEL
Sbjct: 121 EALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNMEL 180

Query: 181 HRKVYGHDSRLE-MSVATGNPLIPYGI 207
           H KV    S +E + +A  N L+  G+
Sbjct: 181 HEKV----SEVEGVKIANKNSLLTNGL 203

[Close]

BLAST of CmaCh03G008540 vs. ExPASy Swiss-Prot
Match: Q9SI38 (MADS-box transcription factor ANR1 OS=Arabidopsis thaliana OX=3702 GN=ANR1 PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55
Identity = 125/240 (52.08%), Postives = 172/240 (71.67%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAS- 60
           MGRGKIVIRRIDNS SRQVTFSKRR GL+KKAKELSILCDAEV +IIFSS+GK Y++AS 
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60

Query: 61  TSIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLS 120
           +S++++IE+YNR KEE   LLN  S++K WQ+EV+ L+QQL  LQE +RKL+GE+L G++
Sbjct: 61  SSMKTIIERYNRVKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELSGMN 120

Query: 121 IKDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENME 180
             DL +LE QL  SL+ +R+KK+Q++ +EI+ELNRKG ++ ++N EL N V++  +EN++
Sbjct: 121 ANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIVDIMRKENIK 180

Query: 181 LHRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVP-----IHLQLSPREQ 235
           L +KV+G  + +E     GN          ++  PI        P     I LQ +PRE+
Sbjct: 181 LQKKVHGRTNAIE-----GN----------SSVDPISNGTTTYAPPQLQLIQLQPAPREK 225

[Close]

BLAST of CmaCh03G008540 vs. ExPASy TrEMBL
Match: A0A6J1IST8 (MADS-box transcription factor 23-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478102 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.1e-121
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL
Sbjct: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 235
           HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ
Sbjct: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 234

[Close]

BLAST of CmaCh03G008540 vs. ExPASy TrEMBL
Match: A0A6J1INS2 (MADS-box transcription factor 23-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478102 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.4e-117
Identity = 231/234 (98.72%), Postives = 231/234 (98.72%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           SIESVIEKYNRRKEEDELLLNPISDVK   KEVSGLRQQLLNLQENNRKLMGEQLYGLSI
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL
Sbjct: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 235
           HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ
Sbjct: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 231

[Close]

BLAST of CmaCh03G008540 vs. ExPASy TrEMBL
Match: A0A6J1GFD4 (MADS-box transcription factor 23-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453677 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 220/234 (94.02%), Postives = 223/234 (95.30%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAE+ALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVS LRQQLLNLQENNRKLMGEQLYGLSI
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSALRQQLLNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           KDLNSLESQLEFSLQSIRIKKEQIL+DEIKELNRKGILMHQQNVELANKVNLFCQEN+EL
Sbjct: 121 KDLNSLESQLEFSLQSIRIKKEQILNDEIKELNRKGILMHQQNVELANKVNLFCQENIEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 235
           HRKVYGHDSRLEMSVATGNPLIPY          IGGDAGLRVPIHLQLSPREQ
Sbjct: 181 HRKVYGHDSRLEMSVATGNPLIPYA---------IGGDAGLRVPIHLQLSPREQ 225

[Close]

BLAST of CmaCh03G008540 vs. ExPASy TrEMBL
Match: A0A6J1GFD5 (MADS-box transcription factor 23-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453677 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.0e-107
Identity = 217/234 (92.74%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAE+ALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           SIESVIEKYNRRKEEDELLLNPISDVK   KEVS LRQQLLNLQENNRKLMGEQLYGLSI
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSALRQQLLNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           KDLNSLESQLEFSLQSIRIKKEQIL+DEIKELNRKGILMHQQNVELANKVNLFCQEN+EL
Sbjct: 121 KDLNSLESQLEFSLQSIRIKKEQILNDEIKELNRKGILMHQQNVELANKVNLFCQENIEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 235
           HRKVYGHDSRLEMSVATGNPLIPY          IGGDAGLRVPIHLQLSPREQ
Sbjct: 181 HRKVYGHDSRLEMSVATGNPLIPYA---------IGGDAGLRVPIHLQLSPREQ 222

[Close]

BLAST of CmaCh03G008540 vs. ExPASy TrEMBL
Match: A0A1S3B1W8 (MADS-box transcription factor 23 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484916 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.9e-99
Identity = 203/237 (85.65%), Postives = 220/237 (92.83%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEV LIIFSSSGK YEFAS+
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           S+ S+IEKYNRRKEEDELLLNPISDVKLWQKEV+ LRQQL NLQENNRKLMGEQLYGLSI
Sbjct: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           KDLN+LE+QLEFSLQSIRIKKEQIL++EIKELNRKGILMHQ+N+EL NKV+L+CQENMEL
Sbjct: 121 KDLNNLENQLEFSLQSIRIKKEQILNEEIKELNRKGILMHQENIELCNKVSLYCQENMEL 180

Query: 181 HRKVYGHD-SRLEMSVA-TGNPLIPYGIISA-AAAGPIGGDAGLRVPIHLQLSPREQ 235
           HRKVYGH+ SR EM++A TGN LIPYGII+A AAA PI G+  L VPIHLQLSP EQ
Sbjct: 181 HRKVYGHNYSRSEMNLANTGNALIPYGIITATAAAAPIAGN-DLCVPIHLQLSPPEQ 236

[Close]

BLAST of CmaCh03G008540 vs. NCBI nr
Match: XP_022977969.1 (MADS-box transcription factor 23-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 444.9 bits (1143), Expect = 4.3e-121
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL
Sbjct: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 235
           HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ
Sbjct: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 234

[Close]

BLAST of CmaCh03G008540 vs. NCBI nr
Match: XP_022977970.1 (MADS-box transcription factor 23-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 432.2 bits (1110), Expect = 2.9e-117
Identity = 231/234 (98.72%), Postives = 231/234 (98.72%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           SIESVIEKYNRRKEEDELLLNPISDVK   KEVSGLRQQLLNLQENNRKLMGEQLYGLSI
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL
Sbjct: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 235
           HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ
Sbjct: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 231

[Close]

BLAST of CmaCh03G008540 vs. NCBI nr
Match: XP_023543261.1 (MADS-box transcription factor 23-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429.1 bits (1102), Expect = 2.5e-116
Identity = 226/234 (96.58%), Postives = 230/234 (98.29%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAE+ALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           SIESVIEKYN RKEEDELLLNPISDVKLWQKEVS LRQQLL LQENNRKLMGEQLYGLSI
Sbjct: 61  SIESVIEKYNTRKEEDELLLNPISDVKLWQKEVSALRQQLLKLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           KDLNSLESQLEFSLQSIRIKKEQIL+DEIKELNRKGILMHQQNVELANKVNLFCQEN+EL
Sbjct: 121 KDLNSLESQLEFSLQSIRIKKEQILNDEIKELNRKGILMHQQNVELANKVNLFCQENIEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 235
           HRKVYGHDSR EMSVATGNPLIPYGIISAAAAGPIGGDAGLR+PIHLQLSPREQ
Sbjct: 181 HRKVYGHDSRSEMSVATGNPLIPYGIISAAAAGPIGGDAGLRMPIHLQLSPREQ 234

[Close]

BLAST of CmaCh03G008540 vs. NCBI nr
Match: XP_022950636.1 (MADS-box transcription factor 23-like isoform X1 [Cucurbita moschata] >KAG7034240.1 MADS-box transcription factor 27, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 412.5 bits (1059), Expect = 2.4e-111
Identity = 220/234 (94.02%), Postives = 223/234 (95.30%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAE+ALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVS LRQQLLNLQENNRKLMGEQLYGLSI
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSALRQQLLNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           KDLNSLESQLEFSLQSIRIKKEQIL+DEIKELNRKGILMHQQNVELANKVNLFCQEN+EL
Sbjct: 121 KDLNSLESQLEFSLQSIRIKKEQILNDEIKELNRKGILMHQQNVELANKVNLFCQENIEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 235
           HRKVYGHDSRLEMSVATGNPLIPY          IGGDAGLRVPIHLQLSPREQ
Sbjct: 181 HRKVYGHDSRLEMSVATGNPLIPYA---------IGGDAGLRVPIHLQLSPREQ 225

[Close]

BLAST of CmaCh03G008540 vs. NCBI nr
Match: XP_022950637.1 (MADS-box transcription factor 23-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 399.4 bits (1025), Expect = 2.1e-107
Identity = 217/234 (92.74%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAE+ALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           SIESVIEKYNRRKEEDELLLNPISDVK   KEVS LRQQLLNLQENNRKLMGEQLYGLSI
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSALRQQLLNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           KDLNSLESQLEFSLQSIRIKKEQIL+DEIKELNRKGILMHQQNVELANKVNLFCQEN+EL
Sbjct: 121 KDLNSLESQLEFSLQSIRIKKEQILNDEIKELNRKGILMHQQNVELANKVNLFCQENIEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 235
           HRKVYGHDSRLEMSVATGNPLIPY          IGGDAGLRVPIHLQLSPREQ
Sbjct: 181 HRKVYGHDSRLEMSVATGNPLIPYA---------IGGDAGLRVPIHLQLSPREQ 222

[Close]

BLAST of CmaCh03G008540 vs. TAIR 10
Match: AT4G37940.1 (AGAMOUS-like 21 )

HSP 1 Score: 231.5 bits (589), Expect = 7.0e-61
Identity = 120/185 (64.86%), Postives = 158/185 (85.41%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVI+RID+S SRQVTFSKRRKGLIKKAKEL+ILCDAEV LIIFSS+GK Y+FAS+
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           S++SVI++YN+ K E + LLNP S+VK WQ+E + LRQ+L  LQEN+R++MGEQL GLS+
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
            +LNSLE+Q+E SL+ IR++KEQ+L  EI+EL++K  L+HQ+N++L+ KV    QEN+EL
Sbjct: 121 NELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVEL 180

Query: 181 HRKVY 186
           ++K Y
Sbjct: 181 YKKAY 185

[Close]

BLAST of CmaCh03G008540 vs. TAIR 10
Match: AT2G22630.1 (AGAMOUS-like 17 )

HSP 1 Score: 223.8 bits (569), Expect = 1.5e-58
Identity = 117/186 (62.90%), Postives = 153/186 (82.26%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKIVI++ID+S SRQVTFSKRRKGLIKKAKEL+ILCDAEV LIIFS++ K Y+FAS+
Sbjct: 1   MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           S++S IE++N  K E++ L+NP S+VK WQ+E   LRQ+L +LQEN R+L G +L GLS+
Sbjct: 61  SVKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSV 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           K+L ++ESQLE SL+ IR+K+EQIL +EIKEL RK  L+H +N+EL+ KV    QEN+EL
Sbjct: 121 KELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQENVEL 180

Query: 181 HRKVYG 187
           ++K YG
Sbjct: 181 YKKAYG 186

[Close]

BLAST of CmaCh03G008540 vs. TAIR 10
Match: AT2G14210.1 (AGAMOUS-like 44 )

HSP 1 Score: 217.6 bits (553), Expect = 1.0e-56
Identity = 125/240 (52.08%), Postives = 172/240 (71.67%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAS- 60
           MGRGKIVIRRIDNS SRQVTFSKRR GL+KKAKELSILCDAEV +IIFSS+GK Y++AS 
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60

Query: 61  TSIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLS 120
           +S++++IE+YNR KEE   LLN  S++K WQ+EV+ L+QQL  LQE +RKL+GE+L G++
Sbjct: 61  SSMKTIIERYNRVKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELSGMN 120

Query: 121 IKDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENME 180
             DL +LE QL  SL+ +R+KK+Q++ +EI+ELNRKG ++ ++N EL N V++  +EN++
Sbjct: 121 ANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIVDIMRKENIK 180

Query: 181 LHRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVP-----IHLQLSPREQ 235
           L +KV+G  + +E     GN          ++  PI        P     I LQ +PRE+
Sbjct: 181 LQKKVHGRTNAIE-----GN----------SSVDPISNGTTTYAPPQLQLIQLQPAPREK 225

[Close]

BLAST of CmaCh03G008540 vs. TAIR 10
Match: AT3G57230.1 (AGAMOUS-like 16 )

HSP 1 Score: 217.6 bits (553), Expect = 1.0e-56
Identity = 117/207 (56.52%), Postives = 164/207 (79.23%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKI I+RI+NS SRQVTFSKRR GL+KKAKEL+ILCDAEV +IIFSS+G+ Y+F+S+
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120
           S++SVIE+Y+  K E     +P S+++ WQKE + L++QL NLQEN+R++MGE+L GLS+
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120

Query: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180
           + L +LE+QLE SL+ +R+KK+Q+L +EI+ LNR+G L+HQ+N++L  KVNL  Q+NMEL
Sbjct: 121 EALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNMEL 180

Query: 181 HRKVYGHDSRLE-MSVATGNPLIPYGI 207
           H KV    S +E + +A  N L+  G+
Sbjct: 181 HEKV----SEVEGVKIANKNSLLTNGL 203

[Close]

BLAST of CmaCh03G008540 vs. TAIR 10
Match: AT3G57230.2 (AGAMOUS-like 16 )

HSP 1 Score: 183.3 bits (464), Expect = 2.2e-46
Identity = 107/210 (50.95%), Postives = 155/210 (73.81%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60
           MGRGKI I+RI+NS SRQVTFSKRR GL+KKAKEL+ILCDAEV +IIFSS+G+ Y+F+S+
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVK---LWQKEVSGLRQQLLNLQENNRKLMGEQLYG 120
           S++SVIE+Y+  K E     +P S+++   +   E     ++L+     +R++MGE+L G
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQEMYIVTLEKYAYSEELV----LDRQMMGEELSG 120

Query: 121 LSIKDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQEN 180
           LS++ L +LE+QLE SL+ +R+KK+Q+L +EI+ LNR+G L+HQ+N++L  KVNL  Q+N
Sbjct: 121 LSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQN 180

Query: 181 MELHRKVYGHDSRLE-MSVATGNPLIPYGI 207
           MELH KV    S +E + +A  N L+  G+
Sbjct: 181 MELHEKV----SEVEGVKIANKNSLLTNGL 202

The following BLAST results are available for this feature:

BLAST of CmaCh03G008540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6EP49	1.1e-61	60.50	MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
Q9SZJ6	9.8e-60	64.86	Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana OX=3702 GN=AGL21 PE=...	[more]
Q38840	2.1e-57	62.90	Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana OX=3702 GN=AGL17 PE=...	[more]
A2RVQ5	1.5e-55	56.52	Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana OX=3702 GN=AGL16 PE=...	[more]
Q9SI38	1.5e-55	52.08	MADS-box transcription factor ANR1 OS=Arabidopsis thaliana OX=3702 GN=ANR1 PE=1 ...	[more]

BLAST of CmaCh03G008540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IST8	2.1e-121	100.00	MADS-box transcription factor 23-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1INS2	1.4e-117	98.72	MADS-box transcription factor 23-like isoform X2 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1GFD4	1.1e-111	94.02	MADS-box transcription factor 23-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1GFD5	1.0e-107	92.74	MADS-box transcription factor 23-like isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A1S3B1W8	2.9e-99	85.65	MADS-box transcription factor 23 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484...	[more]

BLAST of CmaCh03G008540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977969.1	4.3e-121	100.00	MADS-box transcription factor 23-like isoform X1 [Cucurbita maxima]	[more]
XP_022977970.1	2.9e-117	98.72	MADS-box transcription factor 23-like isoform X2 [Cucurbita maxima]	[more]
XP_023543261.1	2.5e-116	96.58	MADS-box transcription factor 23-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_022950636.1	2.4e-111	94.02	MADS-box transcription factor 23-like isoform X1 [Cucurbita moschata] >KAG703424...	[more]
XP_022950637.1	2.1e-107	92.74	MADS-box transcription factor 23-like isoform X2 [Cucurbita moschata]	[more]

BLAST of CmaCh03G008540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37940.1	7.0e-61	64.86	AGAMOUS-like 21	[more]
AT2G22630.1	1.5e-58	62.90	AGAMOUS-like 17	[more]
AT2G14210.1	1.0e-56	52.08	AGAMOUS-like 44	[more]
AT3G57230.1	1.0e-56	56.52	AGAMOUS-like 16	[more]
AT3G57230.2	2.2e-46	50.95	AGAMOUS-like 16	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..113
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..206
None	No IPR available	PANTHER	PTHR48019:SF83	MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1	coord: 1..206
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 60.87 coord: 23..38 score: 71.33 coord: 38..59 score: 65.42
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 4.9E-38 score: 142.4
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 1.5E-24 score: 85.3
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 31.090147
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 85..170 e-value: 7.5E-23 score: 80.5
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 86..176 score: 13.158158
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..84 e-value: 3.3E-28 score: 99.6
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..77
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..77 e-value: 5.06067E-41 score: 133.061

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G008540.1	CmaCh03G008540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding