CmaCh03G008380 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G008380
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor bHLH131-like
Location	Cma_Chr03: 6304153 .. 6306205 (-)
RNA-Seq Expression	CmaCh03G008380
Synteny	CmaCh03G008380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAAGATCAAAAAGGCTTTTGTGCTTTCTGAGACAATCCGTCTGGTGAAGGAGTTTAAGAAGCTTGTATCAGAAAAGAGAGCAGCTAATCGTGAAGTCAGGGATTGCGGGATACCTAGTGGGGCAGATAGATTGAGCTTAGAACACTGTGATGGTGGTGAAGGGATGGTGAAGGCTGTAATGAGCTGCGAGGACAGGCCGAACATTATGGCAGAATTGGCAAAAGCACTGAAAACGGTGAAAGTGAAGCTGGTGAGAGCTGAAATTGTGACTATGGGTGGAAGGAACAAGTTTGCTCTGTGGATGCAAGGGCCTAAAGAAGGACTTGGCGTGCTTAAGAGGGTTTTGGAGGCTGTTATGAGGAGGCCTTCATGGACAGCTAGAAAACACAGAAGTTCTTGGCATTCCCGAGCCTCAAAGTAACATAATTACCCGTTTGTAATTAGTTGTGATGGCCTTTCTAGAACCATCCATCCCTCTAATCAATACGTCTGGACATGATAGGTGAAGTATACGTACTTGCTGACCTTTTTTCTTCTTATCTTCCTAGTTCCTCTGTAATTCAATGTTTCCAGAGATGGTAATTTGGATTTTATAGCAAAGAAACTTCGAATGAAAAGCTTAATTGATATTACAGGTTATCCTTATCCTATTCAAACAAAAAATGGCTTCCACCAAGATCTCATCTTCTTCAACACAAGACTCCCATCTGAATTCTAAACCTAGCTAGCTCGTTCCCATCAGGTCCTTGTCCTTCTATTCAAACATAGAATGGGTTTAAGAATTGTGTCCAAACGTGTTCTTTTCTTAGCTATGTTGGTCTTCTATCATGGCCTTGTACAGTAGTCGTTATTAATGTACTAGGGAAAACTGCATCAGTGAATAAGGGGTCCTTCGTTTCTTGTGATAGTTGCAGAGTAAACGAATGGGCATTTCCACTTCTGCTGTGGAGTGATTGCATCTGCCAAGTATAATTGCAAAATGATGCTAGTAACTAGCTAAGTCTTCTAACGCACCTCCATTGCAGCCAACACCGAACTGTCATCAATCCTACCTACATCCCGTTGTATCTTACATCTATTACACTAAACCTTAAAGGTATATTATTTTTGTTTCTTTCAACCGACATCTGGTCAGACTAGCATCCACTGACTCAGCGGAATTCTGTATGACCATTAAACCCAGAACTGCGAACAGTCCCAAATATAGATGGATTCCAACAACGTTATCTCCAACTCCAACCATAACACCATTTCAATTATTGCTTCCCATCAAACCATAGTCAAATGAAACAAGTCCTTCAAATTGGCAAAGGTTCCTTGATAGCTGTTATCATCAATCAAATAAGGACTTACTGCCGCGTGCTTCTGAAAAATATGATGCTTCTACAGCAGTAGTACGGTATATAGGTTAATGAAGGAACATGAGAATGAGGCAGGCCGTGAACTAACTAAATATTCATTTCAATGGGAAATGTATTTTACAAAGGATATCTAGATTATTGTGCAATGTAAATAGTTGTACAAAGTCATCATTCACTTACCTCATAAGCCACCCGCCATTGATTGGATGCATACTTGATTTCTTTATATTGATGTGTATCTCCCTTCTCTGCATTCATGTACAAAGAACAGCTGTATAATTTATTGCTTGTAAAAGATTAATTCACGGCTACAATTAGATTTGATAGCATCCTCCAGCTTCTCAACACGGTCGAAATCAACCTTGAATGTCACCATGGTAATACCATCTTTACCACAGTCATAATCCTGCTTAATGTCCTCAACGTGAAAAGATTGCATCTGCAAACACCGACACAAATTTCAGCTCTACAATAATATCCATTTAAAAAGGCGGCAGAAGAAACGGATACTGTGCATGACAGAACTGTAGAACCTTTCTATTATTGCTGGAGCCGAAAGATCATCACTCTATGGTATATATGTAATTGTAAGAATTATAGAAGAATGTTTCCGTCCAAAGTAAATGCAATATTGACTATGACATGAGAACTATACCGAAGGAAGAAAAAACAAGCAGAAACAAATGA

mRNA sequence

ATGAGTAAGATCAAAAAGGCTTTTGTGCTTTCTGAGACAATCCGTCTGGTGAAGGAGTTTAAGAAGCTTGTATCAGAAAAGAGAGCAGCTAATCGTGAAGTCAGGGATTGCGGGATACCTAGTGGGGCAGATAGATTGAGCTTAGAACACTGTGATGGTGGTGAAGGGATGGTGAAGGCTGTAATGAGCTGCGAGGACAGGCCGAACATTATGGCAGAATTGGCAAAAGCACTGAAAACGGTGAAAGTGAAGCTGGTGAGAGCTGAAATTGTGACTATGGGTGGAAGGAACAAGTTTGCTCTGTGGATGCAAGGGCCTAAAGAAGGACTTGGCGTGCTTAAGAGGGTTTTGGAGGCTGTTATGAGGAGGCCTTCATGGACAGCTAGAAAACACAGAAGTTCTTGGCATTCCCGAGCCTCAAAAGTAAACGAATGGGCATTTCCACTTCTGCTGTGGAGTGATTGCATCTGCCAAATTAATTCACGGCTACAATTAGATTTGATAGCATCCTCCAGCTTCTCAACACGGTCGAAATCAACCTTGAATGTCACCATGAAGAATGTTTCCGTCCAAAGTAAATGCAATATTGACTATGACATGAGAACTATACCGAAGGAAGAAAAAACAAGCAGAAACAAATGA

Coding sequence (CDS)

ATGAGTAAGATCAAAAAGGCTTTTGTGCTTTCTGAGACAATCCGTCTGGTGAAGGAGTTTAAGAAGCTTGTATCAGAAAAGAGAGCAGCTAATCGTGAAGTCAGGGATTGCGGGATACCTAGTGGGGCAGATAGATTGAGCTTAGAACACTGTGATGGTGGTGAAGGGATGGTGAAGGCTGTAATGAGCTGCGAGGACAGGCCGAACATTATGGCAGAATTGGCAAAAGCACTGAAAACGGTGAAAGTGAAGCTGGTGAGAGCTGAAATTGTGACTATGGGTGGAAGGAACAAGTTTGCTCTGTGGATGCAAGGGCCTAAAGAAGGACTTGGCGTGCTTAAGAGGGTTTTGGAGGCTGTTATGAGGAGGCCTTCATGGACAGCTAGAAAACACAGAAGTTCTTGGCATTCCCGAGCCTCAAAAGTAAACGAATGGGCATTTCCACTTCTGCTGTGGAGTGATTGCATCTGCCAAATTAATTCACGGCTACAATTAGATTTGATAGCATCCTCCAGCTTCTCAACACGGTCGAAATCAACCTTGAATGTCACCATGAAGAATGTTTCCGTCCAAAGTAAATGCAATATTGACTATGACATGAGAACTATACCGAAGGAAGAAAAAACAAGCAGAAACAAATGA

Protein sequence

MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKAVMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAVMRRPSWTARKHRSSWHSRASKVNEWAFPLLLWSDCICQINSRLQLDLIASSSFSTRSKSTLNVTMKNVSVQSKCNIDYDMRTIPKEEKTSRNK

Homology

[Close]

BLAST of CmaCh03G008380 vs. ExPASy Swiss-Prot
Match: P0CB25 (Transcription factor bHLH131 OS=Arabidopsis thaliana OX=3702 GN=BHLH131 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.2e-16
Identity = 54/134 (40.30%), Postives = 78/134 (58.21%), Query Frame = 0


Query: 3   KIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKAVM 62
           K  KA VL ET+R   E KK+V +             PS  D L L+HC+    + + V 
Sbjct: 123 KQDKASVLGETVRYFNELKKMVQDIPTT---------PSLEDNLRLDHCNNNRDLARVVF 182

Query: 63  SCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQG--PKEGLGVLKRVLEAV 122
           SC DR  +M+E+A+++K VK K VRAEI+T+GGR K AL++QG    EGL  LK+ L+ V
Sbjct: 183 SCSDREGLMSEVAESMKAVKAKAVRAEIMTVGGRTKCALFVQGVNGNEGLVKLKKSLKLV 242

Query: 123 MRRPSWTARKHRSS 135
           +   S +  K+ ++
Sbjct: 243 VNGKSSSEAKNNNN 247

[Close]

BLAST of CmaCh03G008380 vs. ExPASy Swiss-Prot
Match: Q9S7Y1 (Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.8e-10
Identity = 48/164 (29.27%), Postives = 85/164 (51.83%), Query Frame = 0


Query: 2   SKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSL-----EHCDGGEG 61
           +K  KA +L+E I+ VKE K+  S     N       +P+ +D L++     E    G  
Sbjct: 204 TKTDKASLLAEVIQHVKELKRETSVISETNL------VPTESDELTVAFTEEEETGDGRF 263

Query: 62  MVKAVMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEG------- 121
           ++KA + CEDR +++ ++ K LK +++K ++AEI T+GGR K  L++ G +         
Sbjct: 264 VIKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEEE 323

Query: 122 --LGVLKRVLEAVMRR-------PSWTARKHRSSWHSRASKVNE 145
             +G ++  L+AVM +        S  A++ R S H+  + V +
Sbjct: 324 YCIGTIEEALKAVMEKSNVEESSSSGNAKRQRMSSHNTITIVEQ 361

[Close]

BLAST of CmaCh03G008380 vs. ExPASy Swiss-Prot
Match: O80674 (Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.2e-09
Identity = 42/133 (31.58%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 2   SKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEH----CDGGEGM 61
           SK  KA +L++ ++ V+E K+   E   +++ +    +PS  D +S+ H     + G  +
Sbjct: 97  SKTDKATLLAKVVQRVRELKQQTLETSDSDQTL----LPSETDEISVLHFGDYSNDGHII 156

Query: 62  VKAVMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGV----- 121
            KA + CEDR +++ +L + LK++ +K +RAE+VT+GGR +  L +   KE  GV     
Sbjct: 157 FKASLCCEDRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHF 216

Query: 122 LKRVLEAVMRRPS 126
           L+  L++++ R S
Sbjct: 217 LQNALKSLLERSS 225

[Close]

BLAST of CmaCh03G008380 vs. ExPASy Swiss-Prot
Match: Q9LET0 (Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 41/135 (30.37%), Postives = 73/135 (54.07%), Query Frame = 0


Query: 2   SKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLS---LEHCDGGEG-- 61
           SK  K+ +L++ ++ VKE K+          E+ D  IPS  D +S   +E C  G+   
Sbjct: 75  SKTDKSTLLAKVVQRVKELKQ-------QTLEITDETIPSETDEISVLNIEDCSRGDDRR 134

Query: 62  -MVKAVMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGV--- 121
            + K    CEDRP ++ +L + LK+++++ + A++ T+GGR +  L +   KE  GV   
Sbjct: 135 IIFKVSFCCEDRPELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSV 194

Query: 122 --LKRVLEAVMRRPS 126
             L+  L++++ R S
Sbjct: 195 NFLQNALKSLLERSS 202

[Close]

BLAST of CmaCh03G008380 vs. ExPASy Swiss-Prot
Match: Q9LS08 (Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.8e-05
Identity = 31/105 (29.52%), Postives = 64/105 (60.95%), Query Frame = 0


Query: 2   SKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLE---HCDGGEGMV 61
           +K  KA +L+E I+ +KE K+  S+     +      +P+  D L+++   + + G  ++
Sbjct: 162 TKTDKASLLAEVIQHMKELKRQTSQITDTYQ------VPTECDDLTVDSSYNDEEGNLVI 221

Query: 62  KAVMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWM 104
           +A   C+DR ++M ++  ALK+++++ ++AEI T+GGR K  L++
Sbjct: 222 RASFCCQDRTDLMHDVINALKSLRLRTLKAEIATVGGRVKNILFL 260

[Close]

BLAST of CmaCh03G008380 vs. ExPASy TrEMBL
Match: A0A6J1IM34 (transcription factor bHLH131-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478662 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 5.3e-71
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 60
           MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA
Sbjct: 90  MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 149

Query: 61  VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 120
           VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV
Sbjct: 150 VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 209

Query: 121 MRRPSWTARKHRSSWHSRASK 142
           MRRPSWTARKHRSSWHSRASK
Sbjct: 210 MRRPSWTARKHRSSWHSRASK 230

[Close]

BLAST of CmaCh03G008380 vs. ExPASy TrEMBL
Match: A0A6J1IV30 (transcription factor bHLH131-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111478662 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 5.3e-71
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 60
           MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA
Sbjct: 87  MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 146

Query: 61  VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 120
           VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV
Sbjct: 147 VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 206

Query: 121 MRRPSWTARKHRSSWHSRASK 142
           MRRPSWTARKHRSSWHSRASK
Sbjct: 207 MRRPSWTARKHRSSWHSRASK 227

[Close]

BLAST of CmaCh03G008380 vs. ExPASy TrEMBL
Match: A0A6J1IP29 (transcription factor bHLH131-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111478662 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 5.3e-71
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 60
           MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA
Sbjct: 84  MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 143

Query: 61  VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 120
           VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV
Sbjct: 144 VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 203

Query: 121 MRRPSWTARKHRSSWHSRASK 142
           MRRPSWTARKHRSSWHSRASK
Sbjct: 204 MRRPSWTARKHRSSWHSRASK 224

[Close]

BLAST of CmaCh03G008380 vs. ExPASy TrEMBL
Match: A0A6J1IUB8 (transcription factor bHLH131-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478662 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 5.3e-71
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 60
           MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA
Sbjct: 87  MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 146

Query: 61  VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 120
           VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV
Sbjct: 147 VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 206

Query: 121 MRRPSWTARKHRSSWHSRASK 142
           MRRPSWTARKHRSSWHSRASK
Sbjct: 207 MRRPSWTARKHRSSWHSRASK 227

[Close]

BLAST of CmaCh03G008380 vs. ExPASy TrEMBL
Match: A0A6J1GG03 (transcription factor bHLH131-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111453823 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 5.1e-66
Identity = 131/141 (92.91%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 60
           MSK+KKAFVLSETIR+VKEFKKLVSEKRA NREV +CGIP GADRLSLEHCDGGEGMVKA
Sbjct: 90  MSKLKKAFVLSETIRMVKEFKKLVSEKRATNREVGNCGIPGGADRLSLEHCDGGEGMVKA 149

Query: 61  VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 120
           VMSCEDRPNIMAELAKALKTVKVKLVRAE+VTMGGRNKF+LWMQGPKEG GVLKRVLEAV
Sbjct: 150 VMSCEDRPNIMAELAKALKTVKVKLVRAEMVTMGGRNKFSLWMQGPKEGPGVLKRVLEAV 209

Query: 121 MRRPSWTARKHRSSWHSRASK 142
           MRRPSW ARKHRSSWHSRASK
Sbjct: 210 MRRPSWIARKHRSSWHSRASK 230

[Close]

BLAST of CmaCh03G008380 vs. NCBI nr
Match: XP_022978807.1 (transcription factor bHLH131-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 277.3 bits (708), Expect = 1.1e-70
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 60
           MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA
Sbjct: 90  MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 149

Query: 61  VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 120
           VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV
Sbjct: 150 VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 209

Query: 121 MRRPSWTARKHRSSWHSRASK 142
           MRRPSWTARKHRSSWHSRASK
Sbjct: 210 MRRPSWTARKHRSSWHSRASK 230

[Close]

BLAST of CmaCh03G008380 vs. NCBI nr
Match: XP_022978808.1 (transcription factor bHLH131-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 277.3 bits (708), Expect = 1.1e-70
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 60
           MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA
Sbjct: 87  MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 146

Query: 61  VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 120
           VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV
Sbjct: 147 VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 206

Query: 121 MRRPSWTARKHRSSWHSRASK 142
           MRRPSWTARKHRSSWHSRASK
Sbjct: 207 MRRPSWTARKHRSSWHSRASK 227

[Close]

BLAST of CmaCh03G008380 vs. NCBI nr
Match: XP_022978811.1 (transcription factor bHLH131-like isoform X4 [Cucurbita maxima])

HSP 1 Score: 277.3 bits (708), Expect = 1.1e-70
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 60
           MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA
Sbjct: 84  MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 143

Query: 61  VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 120
           VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV
Sbjct: 144 VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 203

Query: 121 MRRPSWTARKHRSSWHSRASK 142
           MRRPSWTARKHRSSWHSRASK
Sbjct: 204 MRRPSWTARKHRSSWHSRASK 224

[Close]

BLAST of CmaCh03G008380 vs. NCBI nr
Match: XP_022978809.1 (transcription factor bHLH131-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 277.3 bits (708), Expect = 1.1e-70
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 60
           MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA
Sbjct: 87  MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 146

Query: 61  VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 120
           VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV
Sbjct: 147 VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 206

Query: 121 MRRPSWTARKHRSSWHSRASK 142
           MRRPSWTARKHRSSWHSRASK
Sbjct: 207 MRRPSWTARKHRSSWHSRASK 227

[Close]

BLAST of CmaCh03G008380 vs. NCBI nr
Match: XP_023545046.1 (transcription factor bHLH131-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.5 bits (672), Expect = 1.6e-66
Identity = 133/140 (95.00%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MSKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKA 60
           MSK+KKAFVLSETIR+VKEFKKLVSEKRA NREV DCGIPSGADRLSLEHCDGGEGMVKA
Sbjct: 87  MSKLKKAFVLSETIRMVKEFKKLVSEKRATNREVGDCGIPSGADRLSLEHCDGGEGMVKA 146

Query: 61  VMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGVLKRVLEAV 120
           VMSCEDRPNIMAELAKALKTVKVKLVRAE+VTMGGRNKFALWMQGPKEG GVLKRVLEAV
Sbjct: 147 VMSCEDRPNIMAELAKALKTVKVKLVRAEMVTMGGRNKFALWMQGPKEGPGVLKRVLEAV 206

Query: 121 MRRPSWTARKHRSSWHSRAS 141
           MRRPSW ARKHRSSWHSRAS
Sbjct: 207 MRRPSWIARKHRSSWHSRAS 226

[Close]

BLAST of CmaCh03G008380 vs. TAIR 10
Match: AT4G38070.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 8.7e-18
Identity = 54/134 (40.30%), Postives = 78/134 (58.21%), Query Frame = 0


Query: 3    KIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEHCDGGEGMVKAVM 62
            K  KA VL ET+R   E KK+V +             PS  D L L+HC+    + + V 
Sbjct: 1380 KQDKASVLGETVRYFNELKKMVQDIPTT---------PSLEDNLRLDHCNNNRDLARVVF 1439

Query: 63   SCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQG--PKEGLGVLKRVLEAV 122
            SC DR  +M+E+A+++K VK K VRAEI+T+GGR K AL++QG    EGL  LK+ L+ V
Sbjct: 1440 SCSDREGLMSEVAESMKAVKAKAVRAEIMTVGGRTKCALFVQGVNGNEGLVKLKKSLKLV 1499

Query: 123  MRRPSWTARKHRSS 135
            +   S +  K+ ++
Sbjct: 1500 VNGKSSSEAKNNNN 1504

[Close]

BLAST of CmaCh03G008380 vs. TAIR 10
Match: AT1G68810.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.7e-11
Identity = 48/164 (29.27%), Postives = 85/164 (51.83%), Query Frame = 0


Query: 2   SKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSL-----EHCDGGEG 61
           +K  KA +L+E I+ VKE K+  S     N       +P+ +D L++     E    G  
Sbjct: 204 TKTDKASLLAEVIQHVKELKRETSVISETNL------VPTESDELTVAFTEEEETGDGRF 263

Query: 62  MVKAVMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEG------- 121
           ++KA + CEDR +++ ++ K LK +++K ++AEI T+GGR K  L++ G +         
Sbjct: 264 VIKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEEE 323

Query: 122 --LGVLKRVLEAVMRR-------PSWTARKHRSSWHSRASKVNE 145
             +G ++  L+AVM +        S  A++ R S H+  + V +
Sbjct: 324 YCIGTIEEALKAVMEKSNVEESSSSGNAKRQRMSSHNTITIVEQ 361

[Close]

BLAST of CmaCh03G008380 vs. TAIR 10
Match: AT2G41130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-10
Identity = 42/133 (31.58%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 2   SKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLEH----CDGGEGM 61
           SK  KA +L++ ++ V+E K+   E   +++ +    +PS  D +S+ H     + G  +
Sbjct: 97  SKTDKATLLAKVVQRVRELKQQTLETSDSDQTL----LPSETDEISVLHFGDYSNDGHII 156

Query: 62  VKAVMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGV----- 121
            KA + CEDR +++ +L + LK++ +K +RAE+VT+GGR +  L +   KE  GV     
Sbjct: 157 FKASLCCEDRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHF 216

Query: 122 LKRVLEAVMRRPS 126
           L+  L++++ R S
Sbjct: 217 LQNALKSLLERSS 225

[Close]

BLAST of CmaCh03G008380 vs. TAIR 10
Match: AT3G56770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 9.6e-09
Identity = 41/135 (30.37%), Postives = 73/135 (54.07%), Query Frame = 0


Query: 2   SKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLS---LEHCDGGEG-- 61
           SK  K+ +L++ ++ VKE K+          E+ D  IPS  D +S   +E C  G+   
Sbjct: 75  SKTDKSTLLAKVVQRVKELKQ-------QTLEITDETIPSETDEISVLNIEDCSRGDDRR 134

Query: 62  -MVKAVMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWMQGPKEGLGV--- 121
            + K    CEDRP ++ +L + LK+++++ + A++ T+GGR +  L +   KE  GV   
Sbjct: 135 IIFKVSFCCEDRPELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSV 194

Query: 122 --LKRVLEAVMRRPS 126
             L+  L++++ R S
Sbjct: 195 NFLQNALKSLLERSS 202

[Close]

BLAST of CmaCh03G008380 vs. TAIR 10
Match: AT3G25710.1 (basic helix-loop-helix 32 )

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-06
Identity = 31/105 (29.52%), Postives = 64/105 (60.95%), Query Frame = 0


Query: 2   SKIKKAFVLSETIRLVKEFKKLVSEKRAANREVRDCGIPSGADRLSLE---HCDGGEGMV 61
           +K  KA +L+E I+ +KE K+  S+     +      +P+  D L+++   + + G  ++
Sbjct: 162 TKTDKASLLAEVIQHMKELKRQTSQITDTYQ------VPTECDDLTVDSSYNDEEGNLVI 221

Query: 62  KAVMSCEDRPNIMAELAKALKTVKVKLVRAEIVTMGGRNKFALWM 104
           +A   C+DR ++M ++  ALK+++++ ++AEI T+GGR K  L++
Sbjct: 222 RASFCCQDRTDLMHDVINALKSLRLRTLKAEIATVGGRVKNILFL 260

The following BLAST results are available for this feature:

BLAST of CmaCh03G008380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CB25	1.2e-16	40.30	Transcription factor bHLH131 OS=Arabidopsis thaliana OX=3702 GN=BHLH131 PE=2 SV=...	[more]
Q9S7Y1	3.8e-10	29.27	Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1	[more]
O80674	4.2e-09	31.58	Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=...	[more]
Q9LET0	1.4e-07	30.37	Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107...	[more]
Q9LS08	2.8e-05	29.52	Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1	[more]

BLAST of CmaCh03G008380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IM34	5.3e-71	100.00	transcription factor bHLH131-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1IV30	5.3e-71	100.00	transcription factor bHLH131-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1IP29	5.3e-71	100.00	transcription factor bHLH131-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1IUB8	5.3e-71	100.00	transcription factor bHLH131-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1GG03	5.1e-66	92.91	transcription factor bHLH131-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of CmaCh03G008380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978807.1	1.1e-70	100.00	transcription factor bHLH131-like isoform X1 [Cucurbita maxima]	[more]
XP_022978808.1	1.1e-70	100.00	transcription factor bHLH131-like isoform X2 [Cucurbita maxima]	[more]
XP_022978811.1	1.1e-70	100.00	transcription factor bHLH131-like isoform X4 [Cucurbita maxima]	[more]
XP_022978809.1	1.1e-70	100.00	transcription factor bHLH131-like isoform X3 [Cucurbita maxima]	[more]
XP_023545046.1	1.6e-66	95.00	transcription factor bHLH131-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh03G008380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38070.1	8.7e-18	40.30	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68810.1	2.7e-11	29.27	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G41130.1	3.0e-10	31.58	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G56770.1	9.6e-09	30.37	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G25710.1	2.0e-06	29.52	basic helix-loop-helix 32	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.260		coord: 61..133 e-value: 6.6E-5 score: 25.0
None	No IPR available	PANTHER	PTHR45844:SF17	TRANSCRIPTION FACTOR BHLH131	coord: 2..128
None	No IPR available	PANTHER	PTHR45844	TRANSCRIPTION FACTOR BHLH30	coord: 2..128
None	No IPR available	SUPERFAMILY	55021	ACT-like	coord: 62..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G008380.1	CmaCh03G008380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity