Sequences
The following sequences are available for this feature:
Legend: polypeptide exon CDS three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTTTAGGGCGAAGAGATCCCGGTGGAGGAAGGGGACATTGACATGTCCGCCGCCGATGACGATGTCATCAAGGTTCTCCGTGCCCCGTCTTTCACTACCACAAGGAAGCAGCTGCCCTTGGCGAAATGCAAGCCAAG ATCCTGCCGGTGCGGCTGTCAGCCAAGAAAGAAAGGAGGAGGCAGATTCGCGATCCGTTTTGTTGGCAATGTGA GATTAGAATTATGGTCTTTATCTAAGTTTTTTATATTGATCATTTCTTTCTATTTGAAACAGAGTTCAATAAATATCCCAAGTTTCATTTCAATGCTTAATTAAGTTTTGTTTACAAAGAACTCTTCAAAATCTAAATCAGAGCCCATAATTGGGGAAATTCATAAATAAATGAAGCTCAAAAACG
ATGAGGTTTAGGGCGAAGAGATCCCGGTGGAGGAAGGGGACATTGACATGTCCGCCGCCGATGACGATGTCATCAAGGTTCTCCGTGCCCCGTCTTTCACTACCACAAGGAAGCAGCTGCCCTTGGCGAAATGCAAGCCAAGATCCTGCCGGTGCGGCTGTCAGCCAAGAAAGAAAGGAGGAGGCAGATTCGCGATCCGTTTTGTTGGCAATGTGAGATTAGAATTATGGTCTTTATCTAAGTTTTTTATATTGATCATTTCTTTCTATTTGAAACAGAGTTCAATAAATATCCCAAGTTTCATTTCAATGCTTAATTAAGTTTTGTTTACAAAGAACTCTTCAAAATCTAAATCAGAGCCCATAATTGGGGAAATTCATAAATAAATGAAGCTCAAAAACG
ATGAGGTTTAGGGCGAAGAGATCCCGGTGGAGGAAGGGGACATTGACATGTCCGCCGCCGATGACGATGTCATCAAGGTTCTCCGTGCCCCGTCTTTCACTACCACAAGGAAGCAGCTGCCCTTGGCGAAATGCAAGCCAAGATCCTGCCGGTGCGGCTGTCAGCCAAGAAAGAAAGGAGGAGGCAGATTCGCGATCCGTTTTGTTGGCAATGTGA
MRFRAKRSRWRKGTLTCPPPMTMSSRFSVPRLSLPQGSSCPWRNASQDPAGAAVSQERKEEADSRSVLLAM
Homology
BLAST of CmaCh03G008160 vs. NCBI nr
Match:
KAG6604042.1 (hypothetical protein SDJN03_04651, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034208.1 hypothetical protein SDJN02_03935, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06
Identity = 50/113 (44.25%), Postives = 55/113 (48.67%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
KAG6604042.1 1.4e-06 44.25 hypothetical protein SDJN03_04651, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
A T G A G G T T T A G G G C G A A G A G A T C C C G G T G G A G G A A G G G G A C A T T G A C A T G T C C G C C G C C G A T G A C G A T G T C A T C A A G G T T C T C C G T G C C C C G T C T T T C A C T A C C A C A A G G A A G C A G C T G C C C T T G G C G A A A T G C A A G C C A A G A T C C T G C C G G T G C G G C T G T C A G C C A A G A A A G A A A G G A G G A G G C A G A T T C G C G A T C C G T T T T G T T G G C A A T G T G A G A T T A G A A T T A T G G T C T T T A T C T A A G T T T T T T A T A T T G A T C A T T T C T T T C T A T T T G A A A C A G A G T T C A A T A A A T A T C C C A A G T T T C A T T T C A A T G C T T A A T T A A G T T T T G T T T A C A A A G A A C T C T T C A A A A T C T A A A T C A G A G C C C A T A A T T G G G G A A A T T C A T A A A T A A A T G A A G C T C A A A A A C G 50 100 150 200 250 300 350 400 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 18..51 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..71
Relationships
The following mRNA feature(s) are a part of this gene:
