CmaCh03G007690 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G007690
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	homeobox-leucine zipper protein ATHB-40-like
Location	Cma_Chr03: 5995766 .. 5997148 (-)
RNA-Seq Expression	CmaCh03G007690
Synteny	CmaCh03G007690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACCAATCCCTGTTTAAACCAACCCCCAACTCTTCTCCCACTGCCCAAAATTGAACGCCGGTGACAATGGCCGCCGTCAATCTCCGACCAGACGACGACAATTCTACACTCATCTCCCACTTCTACAATCCTGAAATTTACACCCAAATGCTACCCCAACAAGGTTCTTTAATTTTAATAACTCAAACCCATTAGCGTTCCGTTTTATCTTCTACGTGATTATTAATTCTATTTGATTTCCATTGTTTTTCAGGTACGGCAGAGGGAAACAAGCCGACGAAGAGACGGCGGAGGAGGAGCAGAGTGAAGGAGGTGGCCTCAACCGCCGGGTTGAAGAAGAGGAAGCTGAGTTCAGAGCAAGTGAAGCTTTTGGAGATGAATTTTGGAAACGAGCACAAATTGGAAACGGAGAGGAAAAATCGGTTGGCTTCAGAATTAGGCCTTGATCCAAGCCAAGTCGCCATCTGGTTTCAGAACCGCCGTGCGCGGTGGAAGAACCAGAAACTGGAACACCAATATTCCATTCTCAAAAAAGCTCACGATTCTGCTGTTCTCCAAAAAACCCATCTTCAATCTCAGGTTAGTTATTATAATTCCAACTTCAGAATATATTATAGAATATTAAATATTATATCTTAATTAATTTATATTTTTTTATATTAATGGATAAGTTTATATCATATTTAAAAGTGATGAATATTAACCTGAACCCACTTCCATTATATTTCTCATTTTTAACATGGTATCACAGTAAATGTCTTAGCCATGTCAATAGATTAATAAATCCTCAAATGTCGAACAAAAGACTAAAAAAAAAAAGGAGTCGAGCCTCGATTAAGGGGAGGGGTACTTTGTTCGAGATGACGTATTGGATTATGAAAGTTCCACATCGGCTAATTTAGAAAACGATCATGAGTTTATAATAAAATAATACTCTCTCCATTGGTACGAGGTTTTTTAGAGATGTCTCAAGCAAAACTACGATAGTTTATGCTCAAAGATATTGTTTGAACTTATCTTTTTATGTTTCTAAAATATTATTACCTTTTCATTTGCTTTATCTGGTAAGAAATTAACAAAATATGGTAATAAAATAACAAAATGCTTTTTTTTATTAGGAAATAATTAGATTTTTGGATGAATTCAGATAGAGAAACTGAAACAGCAACTAGCGGAAGCGAAGAATGAGATACAGAAACTGGTGGAAGTACGCGAGATCAACCGGAGGTCGTCGGTGACGATGGATGACGTGCAAGCGGCGGCGTGTTGGGGAGAGATATTAATGGAAGAATATGAAGATGTATTCTGCTCTATGCAAGAGAACAATTATAATCAACCAGTGGAGTGGTACCTTAATTATAATTATATGTACACTAATTAA

mRNA sequence

CAAACCAATCCCTGTTTAAACCAACCCCCAACTCTTCTCCCACTGCCCAAAATTGAACGCCGGTGACAATGGCCGCCGTCAATCTCCGACCAGACGACGACAATTCTACACTCATCTCCCACTTCTACAATCCTGAAATTTACACCCAAATGCTACCCCAACAAGGTACGGCAGAGGGAAACAAGCCGACGAAGAGACGGCGGAGGAGGAGCAGAGTGAAGGAGGTGGCCTCAACCGCCGGGTTGAAGAAGAGGAAGCTGAGTTCAGAGCAAGTGAAGCTTTTGGAGATGAATTTTGGAAACGAGCACAAATTGGAAACGGAGAGGAAAAATCGGTTGGCTTCAGAATTAGGCCTTGATCCAAGCCAAGTCGCCATCTGGTTTCAGAACCGCCGTGCGCGGTGGAAGAACCAGAAACTGGAACACCAATATTCCATTCTCAAAAAAGCTCACGATTCTGCTGTTCTCCAAAAAACCCATCTTCAATCTCAGATAGAGAAACTGAAACAGCAACTAGCGGAAGCGAAGAATGAGATACAGAAACTGGTGGAAGTACGCGAGATCAACCGGAGGTCGTCGGTGACGATGGATGACGTGCAAGCGGCGGCGTGTTGGGGAGAGATATTAATGGAAGAATATGAAGATGTATTCTGCTCTATGCAAGAGAACAATTATAATCAACCAGTGGAGTGGTACCTTAATTATAATTATATGTACACTAATTAA

Coding sequence (CDS)

ATGGCCGCCGTCAATCTCCGACCAGACGACGACAATTCTACACTCATCTCCCACTTCTACAATCCTGAAATTTACACCCAAATGCTACCCCAACAAGGTACGGCAGAGGGAAACAAGCCGACGAAGAGACGGCGGAGGAGGAGCAGAGTGAAGGAGGTGGCCTCAACCGCCGGGTTGAAGAAGAGGAAGCTGAGTTCAGAGCAAGTGAAGCTTTTGGAGATGAATTTTGGAAACGAGCACAAATTGGAAACGGAGAGGAAAAATCGGTTGGCTTCAGAATTAGGCCTTGATCCAAGCCAAGTCGCCATCTGGTTTCAGAACCGCCGTGCGCGGTGGAAGAACCAGAAACTGGAACACCAATATTCCATTCTCAAAAAAGCTCACGATTCTGCTGTTCTCCAAAAAACCCATCTTCAATCTCAGATAGAGAAACTGAAACAGCAACTAGCGGAAGCGAAGAATGAGATACAGAAACTGGTGGAAGTACGCGAGATCAACCGGAGGTCGTCGGTGACGATGGATGACGTGCAAGCGGCGGCGTGTTGGGGAGAGATATTAATGGAAGAATATGAAGATGTATTCTGCTCTATGCAAGAGAACAATTATAATCAACCAGTGGAGTGGTACCTTAATTATAATTATATGTACACTAATTAA

Protein sequence

MAAVNLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVASTAGLKKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEHQYSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRRSSVTMDDVQAAACWGEILMEEYEDVFCSMQENNYNQPVEWYLNYNYMYTN

Homology

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BLAST of CmaCh03G007690 vs. ExPASy Swiss-Prot
Match: O23208 (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-40 PE=2 SV=3)

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-37
Identity = 96/220 (43.64%), Postives = 141/220 (64.09%), Query Frame = 0


Query: 4   VNLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVASTAG---LK 63
           +N   DD N   IS  Y P++YTQ++ Q G     K  KRRR++++    ++  G    +
Sbjct: 1   MNYTVDDQNMAFISQLY-PDVYTQIV-QPGEV---KQPKRRRKKTKGSVASADGGNGLFR 60

Query: 64  KRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEHQ 123
           KRKL+ EQV +LEM+FG+EHKLE+ERK+RLA+ELGLDP QVA+WFQNRRARWKN++LE +
Sbjct: 61  KRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEE 120

Query: 124 YSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRRSSVTMDDVQAAA 183
           Y+ LK +HD+ V+ K  L+S++ +LK+QL +A+ EIQ+L E  E    +S     V   A
Sbjct: 121 YNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISSSVSVEA 180

Query: 184 ----CWGEILM----EEYEDVFCSMQENNYNQPVEWYLNY 213
                +G+  +    ++Y+ +F  + EN+Y    EW   Y
Sbjct: 181 NETPFFGDYKVGDDGDDYDHLFYPVPENSYIDEAEWMSLY 215

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BLAST of CmaCh03G007690 vs. ExPASy Swiss-Prot
Match: Q9ZU70 (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.4e-36
Identity = 85/163 (52.15%), Postives = 118/163 (72.39%), Query Frame = 0


Query: 5   NLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVA------STAG 64
           N   DD N  LIS  Y P +YT ++PQQG     KPT+RR+R+S+   VA          
Sbjct: 3   NQNVDDHNLLLISQLY-PNVYTPLVPQQGGEA--KPTRRRKRKSKSVVVAEEGENEGNGW 62

Query: 65  LKKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLE 124
            +KRKLS EQV++LE++F ++HKLE+ERK+RLASELGLDP QVA+WFQNRRARWKN+++E
Sbjct: 63  FRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVE 122

Query: 125 HQYSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVE 162
            +Y+ LK A+++ V++K  L S++  LK+QL EA+ EIQ+L +
Sbjct: 123 DEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAK 162

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BLAST of CmaCh03G007690 vs. ExPASy Swiss-Prot
Match: Q9LVR0 (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.3e-33
Identity = 91/185 (49.19%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 36  EGNKPTKRRRRR-------SRVKEVASTAG-LKKRKLSSEQVKLLEMNFGNEHKLETERK 95
           E +KP KRRR+R       +  ++VA   G L+KRKL+ EQV +LE +FGNEHKLE+ RK
Sbjct: 39  EESKPVKRRRKRRSKGSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRK 98

Query: 96  NRLASELGLDPSQVAIWFQNRRARWKNQKLEHQYSILKKAHDSAVLQKTHLQSQIEKLKQ 155
            ++A ELGLDP QVA+WFQNRRARWKN+KLE +Y+ LK  HD+ VL +  L+SQI KL +
Sbjct: 99  EKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTE 158

Query: 156 QLAEAKNEIQKLVE-VREINRRSSVTMDDVQA--AACWGEILMEEYEDVFCSMQENNYNQ 210
           QL+EA++EI+KL E + E+   SS +   V+A  A    E+  E   ++   M +NNY Q
Sbjct: 159 QLSEAQSEIRKLSERLEEMPTNSSSSSLSVEANNAPTDFELAPETNYNIPFYMLDNNYLQ 218

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BLAST of CmaCh03G007690 vs. ExPASy Swiss-Prot
Match: A2YN17 (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica OX=39946 GN=HOX14 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.8e-27
Identity = 69/140 (49.29%), Postives = 96/140 (68.57%), Query Frame = 0


Query: 28  MLPQQGTAEGNKPTKRRRRRSRVKEVASTAG--------LKKRKLSSEQVKLLEMNFGNE 87
           +L   G  +G +P  RRRRR   + V    G         KKR+LS EQV++LE++F  E
Sbjct: 22  LLAASGEVQGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRRLSDEQVEMLELSFREE 81

Query: 88  HKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEHQYSILKKAHDSAVLQKTHLQ 147
            KLET RK  LASELGLDP QVA+WFQNRRAR K++ LE ++S LK AHD+A+L K HL+
Sbjct: 82  RKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHKCHLE 141

Query: 148 SQIEKLKQQLAEAKNEIQKL 160
           +++ +LK++L  A+ E+++L
Sbjct: 142 NEVLRLKERLVVAEEEVRRL 161

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BLAST of CmaCh03G007690 vs. ExPASy Swiss-Prot
Match: Q7XI85 (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX14 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.8e-27
Identity = 69/140 (49.29%), Postives = 96/140 (68.57%), Query Frame = 0


Query: 28  MLPQQGTAEGNKPTKRRRRRSRVKEVASTAG--------LKKRKLSSEQVKLLEMNFGNE 87
           +L   G  +G +P  RRRRR   + V    G         KKR+LS EQV++LE++F  E
Sbjct: 22  LLAASGEVQGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRRLSDEQVEMLELSFREE 81

Query: 88  HKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEHQYSILKKAHDSAVLQKTHLQ 147
            KLET RK  LASELGLDP QVA+WFQNRRAR K++ LE ++S LK AHD+A+L K HL+
Sbjct: 82  RKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHKCHLE 141

Query: 148 SQIEKLKQQLAEAKNEIQKL 160
           +++ +LK++L  A+ E+++L
Sbjct: 142 NEVLRLKERLVVAEEEVRRL 161

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BLAST of CmaCh03G007690 vs. ExPASy TrEMBL
Match: A0A6J1IQG4 (homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita maxima OX=3661 GN=LOC111478502 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MAAVNLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVASTAGLK 60
           MAAVNLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVASTAGLK
Sbjct: 1   MAAVNLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVASTAGLK 60

Query: 61  KRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEHQ 120
           KRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEHQ
Sbjct: 61  KRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEHQ 120

Query: 121 YSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRRSSVTMDDVQAAA 180
           YSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRRSSVTMDDVQAAA
Sbjct: 121 YSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRRSSVTMDDVQAAA 180

Query: 181 CWGEILMEEYEDVFCSMQENNYNQPVEWYLNYNYMYTN 219
           CWGEILMEEYEDVFCSMQENNYNQPVEWYLNYNYMYTN
Sbjct: 181 CWGEILMEEYEDVFCSMQENNYNQPVEWYLNYNYMYTN 218

[Close]

BLAST of CmaCh03G007690 vs. ExPASy TrEMBL
Match: A0A6J1GFW2 (homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita moschata OX=3662 GN=LOC111453582 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.2e-104
Identity = 204/219 (93.15%), Postives = 209/219 (95.43%), Query Frame = 0


Query: 1   MAAVNLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVA-STAGL 60
           MAAVNLRPDDDNSTLISH YNPEIYTQMLPQQGTAEGNKPTKRRRRRSR KEVA + AGL
Sbjct: 1   MAAVNLRPDDDNSTLISHLYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRAKEVAEAAAGL 60

Query: 61  KKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEH 120
           KKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEH
Sbjct: 61  KKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEH 120

Query: 121 QYSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRRSSVTMDDVQAA 180
           QYS+LKKAHDSAVLQKTHLQS+IEKLK+QLAEAKNEIQKLVEV E NRR SVTMDDVQAA
Sbjct: 121 QYSMLKKAHDSAVLQKTHLQSEIEKLKEQLAEAKNEIQKLVEVSERNRRWSVTMDDVQAA 180

Query: 181 ACWGEILMEEYEDVFCSMQENNYNQPVEWYLNYNYMYTN 219
           ACWGEILMEEYEDVF SMQENNYN+PVEWYL  NYMYTN
Sbjct: 181 ACWGEILMEEYEDVFYSMQENNYNEPVEWYL--NYMYTN 217

[Close]

BLAST of CmaCh03G007690 vs. ExPASy TrEMBL
Match: A0A0A0KGE8 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G501990 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.1e-76
Identity = 158/224 (70.54%), Postives = 183/224 (81.70%), Query Frame = 0


Query: 1   MAAVNLRPDDDNSTLISHFYNPEIYT-QMLPQQGTAEGNKPTKRRRRRSRVKEVASTAGL 60
           MAAVNLRPD DNS L+SH YNPE+YT Q+LPQQGT EG+KPTKRRRRRS+ KE    AGL
Sbjct: 1   MAAVNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTKRRRRRSKAKEGGGAAGL 60

Query: 61  KKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEH 120
           KKRKLSSEQVKLLEMNFGNEHKLE+ERK+RLASELGLDP QVA+WFQNRRARWKN+KLE 
Sbjct: 61  KKRKLSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 120

Query: 121 QYSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRR------SSVTM 180
           +YS LKKAHDS VLQK+HL+S++ K+K+QL EAKNEI+K+VE  E+         SSVTM
Sbjct: 121 EYSTLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTM 180

Query: 181 DDVQAAAC--WGEILMEEYEDVFCSMQENNYNQPVEWYLNYNYM 216
           + V+ AA    GE+  EEYEDVF  MQ+NNYNQ + W LN N+M
Sbjct: 181 EAVEEAAVVPLGELFFEEYEDVFYCMQDNNYNQGLNWALNLNFM 224

[Close]

BLAST of CmaCh03G007690 vs. ExPASy TrEMBL
Match: A0A1S3B2Q4 (homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103485348 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.0e-70
Identity = 148/213 (69.48%), Postives = 173/213 (81.22%), Query Frame = 0


Query: 12  NSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVASTAG-LKKRKLSSEQVK 71
           NS L SH YNPE+YTQ+LPQQGT EGNKPTKRRRRRS+ KE    AG LKKRKLSSEQVK
Sbjct: 13  NSLLSSHLYNPEVYTQVLPQQGTGEGNKPTKRRRRRSKAKEGGGGAGSLKKRKLSSEQVK 72

Query: 72  LLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEHQYSILKKAHDS 131
           LLEMNFGNEHKLE+ERK+RLASELGLDP QVA+WFQNRRARWKN+KLE +YS LKKAHDS
Sbjct: 73  LLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS 132

Query: 132 AVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRR------SSVTMDDVQAAAC--W 191
            +LQK+HL+S++ K+K+QL EAKNEI+K+VE  E+         SSVTM+ V+ AA    
Sbjct: 133 VLLQKSHLESELVKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVPL 192

Query: 192 GEILMEEYEDVFCSMQENNYNQPVEWYLNYNYM 216
           GE+  EEYEDVF  MQ+NNYNQ ++W LN N+M
Sbjct: 193 GELFFEEYEDVFYCMQDNNYNQGLDWALNLNFM 225

[Close]

BLAST of CmaCh03G007690 vs. ExPASy TrEMBL
Match: A0A6J1KN43 (homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita maxima OX=3661 GN=LOC111496798 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 6.4e-64
Identity = 138/206 (66.99%), Postives = 164/206 (79.61%), Query Frame = 0


Query: 10  DDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVASTAGLKKRKLSSEQV 69
           DDN+ LIS+ Y+P +YTQ+L QQG AEGNKP KRRRRRS+ KE A  AGLKKRKLS+EQV
Sbjct: 6   DDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKLSTEQV 65

Query: 70  KLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEHQYSILKKAHD 129
           KLLEMNFG+EHKLE+ERK+RLASELGLDP QVA+WFQNRRARWKN+KLE +YS LKKAHD
Sbjct: 66  KLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 125

Query: 130 SAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVRE----INRRSSVTMDDV-QAAACWGE 189
           S +LQ +HL+S++ KL +QL EAKNEIQ+LVE  E     +  SS TMD V   A  WGE
Sbjct: 126 SILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDTVPPLAPSWGE 185

Query: 190 ILMEEYEDVFCSMQE--NNYNQPVEW 209
           + + EYEDVF  MQ+   NY+Q +EW
Sbjct: 186 LFLGEYEDVFYCMQQQHGNYSQGMEW 211

[Close]

BLAST of CmaCh03G007690 vs. NCBI nr
Match: XP_022978555.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita maxima])

HSP 1 Score: 425.6 bits (1093), Expect = 2.5e-115
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MAAVNLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVASTAGLK 60
           MAAVNLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVASTAGLK
Sbjct: 1   MAAVNLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVASTAGLK 60

Query: 61  KRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEHQ 120
           KRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEHQ
Sbjct: 61  KRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEHQ 120

Query: 121 YSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRRSSVTMDDVQAAA 180
           YSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRRSSVTMDDVQAAA
Sbjct: 121 YSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRRSSVTMDDVQAAA 180

Query: 181 CWGEILMEEYEDVFCSMQENNYNQPVEWYLNYNYMYTN 219
           CWGEILMEEYEDVFCSMQENNYNQPVEWYLNYNYMYTN
Sbjct: 181 CWGEILMEEYEDVFCSMQENNYNQPVEWYLNYNYMYTN 218

[Close]

BLAST of CmaCh03G007690 vs. NCBI nr
Match: XP_022950490.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita moschata])

HSP 1 Score: 388.3 bits (996), Expect = 4.5e-104
Identity = 204/219 (93.15%), Postives = 209/219 (95.43%), Query Frame = 0


Query: 1   MAAVNLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVA-STAGL 60
           MAAVNLRPDDDNSTLISH YNPEIYTQMLPQQGTAEGNKPTKRRRRRSR KEVA + AGL
Sbjct: 1   MAAVNLRPDDDNSTLISHLYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRAKEVAEAAAGL 60

Query: 61  KKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEH 120
           KKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEH
Sbjct: 61  KKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEH 120

Query: 121 QYSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRRSSVTMDDVQAA 180
           QYS+LKKAHDSAVLQKTHLQS+IEKLK+QLAEAKNEIQKLVEV E NRR SVTMDDVQAA
Sbjct: 121 QYSMLKKAHDSAVLQKTHLQSEIEKLKEQLAEAKNEIQKLVEVSERNRRWSVTMDDVQAA 180

Query: 181 ACWGEILMEEYEDVFCSMQENNYNQPVEWYLNYNYMYTN 219
           ACWGEILMEEYEDVF SMQENNYN+PVEWYL  NYMYTN
Sbjct: 181 ACWGEILMEEYEDVFYSMQENNYNEPVEWYL--NYMYTN 217

[Close]

BLAST of CmaCh03G007690 vs. NCBI nr
Match: XP_023544855.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.4 bits (986), Expect = 6.5e-103
Identity = 203/219 (92.69%), Postives = 207/219 (94.52%), Query Frame = 0


Query: 1   MAAVNLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVA-STAGL 60
           MAAVNLRPDDDNSTLISH YNPEIYTQMLPQQG AEGNKPTKRRRRRSR KEVA + AGL
Sbjct: 1   MAAVNLRPDDDNSTLISHIYNPEIYTQMLPQQGMAEGNKPTKRRRRRSRAKEVAEAAAGL 60

Query: 61  KKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEH 120
           KKRKLSSEQVKLLE+NFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEH
Sbjct: 61  KKRKLSSEQVKLLEINFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEH 120

Query: 121 QYSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRRSSVTMDDVQAA 180
           QYSILK AHDSAVLQKTHLQS+IEKLK+QLAEAKNEIQKLVEV E NRR SVTMDDVQAA
Sbjct: 121 QYSILKTAHDSAVLQKTHLQSEIEKLKEQLAEAKNEIQKLVEVSERNRRWSVTMDDVQAA 180

Query: 181 ACWGEILMEEYEDVFCSMQENNYNQPVEWYLNYNYMYTN 219
           ACWGEILMEEYEDVF SMQENNYNQPVEWYL  NYMYTN
Sbjct: 181 ACWGEILMEEYEDVFYSMQENNYNQPVEWYL--NYMYTN 217

[Close]

BLAST of CmaCh03G007690 vs. NCBI nr
Match: KAG6603994.1 (Serine/threonine-protein kinase STY17, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372.1 bits (954), Expect = 3.3e-99
Identity = 193/212 (91.04%), Postives = 201/212 (94.81%), Query Frame = 0


Query: 1   MAAVNLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVAS-TAGL 60
           MAAVNLRPDDDNS LISH YNPEIYTQMLPQQGTAEGNKPTKRRRRRSR KEVA   AGL
Sbjct: 1   MAAVNLRPDDDNSALISHIYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRAKEVAEVAAGL 60

Query: 61  KKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEH 120
           KKRKLS+EQV+LLEMNFGNEHKLETERKNRLA+ELGLDPSQVAIWFQNRRARWKNQKLEH
Sbjct: 61  KKRKLSAEQVRLLEMNFGNEHKLETERKNRLAAELGLDPSQVAIWFQNRRARWKNQKLEH 120

Query: 121 QYSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRRSSVTMDDVQAA 180
           QYS+LKKAHDSAVLQKTHLQS+IEKLK+QLAEAKNEIQKLVEV E NRR SVTMDDVQAA
Sbjct: 121 QYSMLKKAHDSAVLQKTHLQSEIEKLKEQLAEAKNEIQKLVEVSERNRRWSVTMDDVQAA 180

Query: 181 ACWGEILMEEYEDVFCSMQENNYNQPVEWYLN 212
           ACWGEILMEEYEDVF SMQENNYNQPVEW ++
Sbjct: 181 ACWGEILMEEYEDVFYSMQENNYNQPVEWTIS 212

[Close]

BLAST of CmaCh03G007690 vs. NCBI nr
Match: XP_004143500.1 (homeobox-leucine zipper protein ATHB-40 [Cucumis sativus] >KGN48810.1 hypothetical protein Csa_003879 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 2.3e-76
Identity = 158/224 (70.54%), Postives = 183/224 (81.70%), Query Frame = 0


Query: 1   MAAVNLRPDDDNSTLISHFYNPEIYT-QMLPQQGTAEGNKPTKRRRRRSRVKEVASTAGL 60
           MAAVNLRPD DNS L+SH YNPE+YT Q+LPQQGT EG+KPTKRRRRRS+ KE    AGL
Sbjct: 1   MAAVNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTKRRRRRSKAKEGGGAAGL 60

Query: 61  KKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEH 120
           KKRKLSSEQVKLLEMNFGNEHKLE+ERK+RLASELGLDP QVA+WFQNRRARWKN+KLE 
Sbjct: 61  KKRKLSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 120

Query: 121 QYSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRR------SSVTM 180
           +YS LKKAHDS VLQK+HL+S++ K+K+QL EAKNEI+K+VE  E+         SSVTM
Sbjct: 121 EYSTLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTM 180

Query: 181 DDVQAAAC--WGEILMEEYEDVFCSMQENNYNQPVEWYLNYNYM 216
           + V+ AA    GE+  EEYEDVF  MQ+NNYNQ + W LN N+M
Sbjct: 181 EAVEEAAVVPLGELFFEEYEDVFYCMQDNNYNQGLNWALNLNFM 224

[Close]

BLAST of CmaCh03G007690 vs. TAIR 10
Match: AT4G36740.1 (homeobox protein 40 )

HSP 1 Score: 157.9 bits (398), Expect = 9.1e-39
Identity = 96/220 (43.64%), Postives = 141/220 (64.09%), Query Frame = 0


Query: 4   VNLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVASTAG---LK 63
           +N   DD N   IS  Y P++YTQ++ Q G     K  KRRR++++    ++  G    +
Sbjct: 1   MNYTVDDQNMAFISQLY-PDVYTQIV-QPGEV---KQPKRRRKKTKGSVASADGGNGLFR 60

Query: 64  KRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEHQ 123
           KRKL+ EQV +LEM+FG+EHKLE+ERK+RLA+ELGLDP QVA+WFQNRRARWKN++LE +
Sbjct: 61  KRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEE 120

Query: 124 YSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVEVREINRRSSVTMDDVQAAA 183
           Y+ LK +HD+ V+ K  L+S++ +LK+QL +A+ EIQ+L E  E    +S     V   A
Sbjct: 121 YNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISSSVSVEA 180

Query: 184 ----CWGEILM----EEYEDVFCSMQENNYNQPVEWYLNY 213
                +G+  +    ++Y+ +F  + EN+Y    EW   Y
Sbjct: 181 NETPFFGDYKVGDDGDDYDHLFYPVPENSYIDEAEWMSLY 215

[Close]

BLAST of CmaCh03G007690 vs. TAIR 10
Match: AT2G18550.1 (homeobox protein 21 )

HSP 1 Score: 152.5 bits (384), Expect = 3.8e-37
Identity = 85/163 (52.15%), Postives = 118/163 (72.39%), Query Frame = 0


Query: 5   NLRPDDDNSTLISHFYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRVKEVA------STAG 64
           N   DD N  LIS  Y P +YT ++PQQG     KPT+RR+R+S+   VA          
Sbjct: 3   NQNVDDHNLLLISQLY-PNVYTPLVPQQGGEA--KPTRRRKRKSKSVVVAEEGENEGNGW 62

Query: 65  LKKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLE 124
            +KRKLS EQV++LE++F ++HKLE+ERK+RLASELGLDP QVA+WFQNRRARWKN+++E
Sbjct: 63  FRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVE 122

Query: 125 HQYSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEIQKLVE 162
            +Y+ LK A+++ V++K  L S++  LK+QL EA+ EIQ+L +
Sbjct: 123 DEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAK 162

[Close]

BLAST of CmaCh03G007690 vs. TAIR 10
Match: AT5G66700.1 (homeobox 53 )

HSP 1 Score: 142.9 bits (359), Expect = 3.0e-34
Identity = 91/185 (49.19%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 36  EGNKPTKRRRRR-------SRVKEVASTAG-LKKRKLSSEQVKLLEMNFGNEHKLETERK 95
           E +KP KRRR+R       +  ++VA   G L+KRKL+ EQV +LE +FGNEHKLE+ RK
Sbjct: 39  EESKPVKRRRKRRSKGSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRK 98

Query: 96  NRLASELGLDPSQVAIWFQNRRARWKNQKLEHQYSILKKAHDSAVLQKTHLQSQIEKLKQ 155
            ++A ELGLDP QVA+WFQNRRARWKN+KLE +Y+ LK  HD+ VL +  L+SQI KL +
Sbjct: 99  EKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTE 158

Query: 156 QLAEAKNEIQKLVE-VREINRRSSVTMDDVQA--AACWGEILMEEYEDVFCSMQENNYNQ 210
           QL+EA++EI+KL E + E+   SS +   V+A  A    E+  E   ++   M +NNY Q
Sbjct: 159 QLSEAQSEIRKLSERLEEMPTNSSSSSLSVEANNAPTDFELAPETNYNIPFYMLDNNYLQ 218

[Close]

BLAST of CmaCh03G007690 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 96.3 bits (238), Expect = 3.3e-20
Identity = 55/107 (51.40%), Postives = 69/107 (64.49%), Query Frame = 0


Query: 50  VKEVASTAGLKKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRR 109
           V   +STA  KKR+L  EQVK LE NF  ++KLE ERK +LA ELGL P QVAIWFQNRR
Sbjct: 62  VGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRR 121

Query: 110 ARWKNQKLEHQYSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEI 157
           ARWK ++LE  Y +LK   D+    +  LQ   + L  Q+ E K ++
Sbjct: 122 ARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKL 168

[Close]

BLAST of CmaCh03G007690 vs. TAIR 10
Match: AT5G65310.2 (homeobox protein 5 )

HSP 1 Score: 96.3 bits (238), Expect = 3.3e-20
Identity = 55/107 (51.40%), Postives = 69/107 (64.49%), Query Frame = 0


Query: 50  VKEVASTAGLKKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRR 109
           V   +STA  KKR+L  EQVK LE NF  ++KLE ERK +LA ELGL P QVAIWFQNRR
Sbjct: 44  VGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRR 103

Query: 110 ARWKNQKLEHQYSILKKAHDSAVLQKTHLQSQIEKLKQQLAEAKNEI 157
           ARWK ++LE  Y +LK   D+    +  LQ   + L  Q+ E K ++
Sbjct: 104 ARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKL 150

The following BLAST results are available for this feature:

BLAST of CmaCh03G007690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23208	1.3e-37	43.64	Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9ZU70	5.4e-36	52.15	Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9LVR0	4.3e-33	49.19	Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
A2YN17	7.8e-27	49.29	Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q7XI85	7.8e-27	49.29	Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of CmaCh03G007690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IQG4	1.2e-115	100.00	homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1GFW2	2.2e-104	93.15	homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A0A0KGE8	1.1e-76	70.54	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G501990 PE...	[more]
A0A1S3B2Q4	2.0e-70	69.48	homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103485348 ...	[more]
A0A6J1KN43	6.4e-64	66.99	homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of CmaCh03G007690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978555.1	2.5e-115	100.00	homeobox-leucine zipper protein ATHB-40-like [Cucurbita maxima]	[more]
XP_022950490.1	4.5e-104	93.15	homeobox-leucine zipper protein ATHB-40-like [Cucurbita moschata]	[more]
XP_023544855.1	6.5e-103	92.69	homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo]	[more]
KAG6603994.1	3.3e-99	91.04	Serine/threonine-protein kinase STY17, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_004143500.1	2.3e-76	70.54	homeobox-leucine zipper protein ATHB-40 [Cucumis sativus] >KGN48810.1 hypothetic...	[more]

BLAST of CmaCh03G007690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36740.1	9.1e-39	43.64	homeobox protein 40	[more]
AT2G18550.1	3.8e-37	52.15	homeobox protein 21	[more]
AT5G66700.1	3.0e-34	49.19	homeobox 53	[more]
AT5G65310.1	3.3e-20	51.40	homeobox protein 5	[more]
AT5G65310.2	3.3e-20	51.40	homeobox protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 128..162
None	No IPR available	GENE3D	1.10.10.60		coord: 52..122 e-value: 3.6E-19 score: 70.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..54
None	No IPR available	PANTHER	PTHR24326:SF527	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40	coord: 10..211
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 10..211
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 86..95 score: 46.02 coord: 95..111 score: 60.42
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 58..119 e-value: 1.3E-17 score: 74.5
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 61..114 e-value: 1.4E-16 score: 60.0
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 55..115 score: 16.503435
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 60..116 e-value: 1.81345E-14 score: 63.4164
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 90..113
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 59..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G007690.1	CmaCh03G007690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding