CmaCh03G007610 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G007610
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	60S ribosomal export protein NMD3
Location	Cma_Chr03: 5963667 .. 5971230 (-)
RNA-Seq Expression	CmaCh03G007610
Synteny	CmaCh03G007610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCATCAATGGCCGGCACCACCGACAATGGTTGGCGGAGAGCTGGAGGCGACCCATCCACTTGCGGTGGTTGTTTGGTGGCTGACAATGGAACGGCAGCAGGCTCTTGTATTCAACTGTTTGGGCCATATAGAGGCCCATTTATTACTCTGACCCAAACTTGAACTCAAAGGCCCATGGGAGAGCGATGGTAAGCAGGACATCATATTTACAATAATTTATTTATTATTTTCAAAATAATATCCTTCACGATTTTGAGATTTTTTTAAAATAAAAAAACGGTTTTGATTTTTGAGAAGGAAAAGTAGAATGTCACAGCGGATTTGTAAATTATTAAATTATAAATAACCCTTGTTGGTGAACATAATTACCATAACACCCTACAAACCTAAAATCCCAAAGCCCCTTCCTTTGCCGCCATTCGTATTGTCTTCACCAAATCTCAGACCACTATTCTTCTCCATAGCCCTTAGCTTTCTCTTTTCCTTCGCCTCCCTTCTTCTTCATATATCGCTCTGCTACAACCCTCGTCGGCACGCGCTCTCCACCCATCGTTATTGTTTGTTTTCTTTCTTCTTTTTCTATCTTCCTCTCTGCTGAACCGCCCCGGCACGCCGTCCTCTGTTTTGCTGCAACCGCACGACTGCCCGCCGCCTTCTTCTACAACTGCTCATCGTTGAGGTTCACACTCAATCTTCTGTAACTGTAGATCTCTCAGTCCATCGTTGTTTAATTTGCTTGGTTCAATTTTTTTCTTGTTCATTTTCCCCCTGTTCAACAAGTTCGAAAATAGGAAAAAATTGGATTGAGGTCAAATTTAATTTAAAATTCCGCCAAATCCTACTATTTTGTGTAATCAGATGTTGTTAAGTTCGTTTCTGATTAATTACATATTTCTGGTATAGGTTACTATTAGTTGACAGATTCTTCTTGCAATTAAATTCTATGAACATTCTCTGTATTCCGCACCGTGTGATTAATCAGAATATCAGACTTCCACTGTTTTTCTTTTTCTTTTTCTTTTGAAGTTTTCATTTTGGAAGGAATTTTTTCGATATAAAATGGGATTTCAAATCAGACTGAATATTAATTTTTTATATTCAAACCCAACACAAATGGTATCAGAACTGATTTCTAATCCTTCCAAATCCGGGGTTCCAAACAAGGGGTTATGTTTTGGCCTAGATTAGCTTTTTTCACCTTTTCTTCAATAAAAAAGCTTTAGAATTTAACTGGTGTTGTTTTGGTGATCTTTGTTAGGAGTATAACTATGGCTGGAGAAGCAGGATTGTTTGCTGTTCAACAGACCATTGGCAGTGTCTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGCGTCAAATGCTTGTGTTCTGAAGTTGATATCACAGAAGGTCTACAGAAGCAATTGACTATTATGCATTGTCCAGATTGCGAGAGTTACTTGCAGCCACCCCGAACTTGGCTTAAAGCGCAATTAGAATCGAAGGAACTACTGACATTCTGTATCAAAAGGTTAAAAAATTTGAATAAGGTTAAACTGGTACATGCTGAATTTGTTTGGACTGAACCCCATTCCAAGAGGATCAAGGTCAAGCTGAAGGTTCAGAAAGAGGTCCTACATGGGGCAATTTTGGAACAGTCCTATGTCGCGGAGTATGTTGTACAGGATCACTTGTGCGAGTCTTGTGCAAGGGTCCAGGCCAACCCTGACCAGTGGGTAGCTTCTGTTCAACTCAGGCAGCACGTCCCTCACCGCCGTACATTTTTCTTCTTGGAGCAACTGATACTGAAGCATGGTGCTGCTGCCAATGCCATAAGGATCAAACAGATGGATGAAGGTATTGACTTTTTCTTTTCTAATAGGAGTCATGCTGTAAAGTTTGTGGAATTTATTGGAAAGGTTGCTCCAATCAGGAGCCGCAGCGATAAACAACTCGTTTCTCATGATTCTAAGAGTAACGTTCACAACTATAAGCACACTTTCTCCGTTGAAATATCGCCAATATGCCGTGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTGGGCAATCTTGGTCCTCTCGTAATTTGCACCAAAGTTACAAATGCGATTGCTTTACTTGATCCATTCACATTAAGGTACTGCTTCTTGGATGCTGATCAGTATTGGAGGACATCCTTTAGGTCTTTACTCACAAGCAGGCAGCTTGTGGAATATGTTGTACTAGATATTGAGAATGTTTCTACTGAAGTCAATGTTGCTGGTTCTAAGTATATGTTGGCCTATGCTCAAGTAGCTCGCGTATCAGATTTTGGAAGGAACGACACGATATTCTCCATAAGAACCCATCTTGGTCATATTTTGAACCCTGGGGATTATGCCCTTGGTTATGATCTTTATGCAGCCAATAGTAATGATATGGAGATAGAAAAATACAAGGGTCTCGAACTTCCGGAGGCGATTTTAATCAAGAAGAGTTATGAAGAAAAGCGCCAGAGGAAGCGTGGAAAGCCTCGAGCATGGAAGCTTAAATCGCTTGAGATGGATGTTGATGATAGAGGTAGAGCAGAGGAAGATAAGAAAAACTCGGAGTATGAACAGTTTTTGAGAGACTTAGAGGAGAATCCAGATTTGAGGTTCAACATATCATTGTACCGAAATAGAGAATATCAACCATCTGAAATGACTGATGGGGAAGATGGACCTTCAGTACCACTAGAAGAGTTGCTTGCTGATCTTGATTTAGATGAAGGAGATGGAGACGGAGACGATGGCATGGACGAGTAAGTAGGCTGCCTGCTCGTCTTTCTTGTTGGAAGTAGTGCCTTAATTGTTGAACTATGGCTGCCTGCTCGTCTTTCTTGTTGGAAGTAGTGCCTTAATTGTTGAACTATGCTCATTTTTTAGTGTTCGTAACGGGTTATTGCTTGTAATTTTCATTCATACGGCATCTGATTTTTTTAAGGTTTGTTTACAAAAACGTACAAATTTAGGGTCAACCATATCGGCCATGTCATTGTGTCGTTGCTACATGTTTCCCCCTCTTTTTCTTTACAAATGTTGGGGTTTAAATTAGATTATAATTATGTTTAATTAGAAAATCTATGAATTTCAAAAATTTTGAATTAAATCGAATAATTCGTGTTTTAGAATATTCATTTAGATAATAATTTAAAATAAATTAACTTATATTGCTTATTTGAACTAAGTTTAAAGTTTGATTGGTTATGAACATCTATAATCATACAAAATTCATCATATTGAAATCTCGACTTTTGAAGTTATAGACGGAGTCCTACCCAACCTCTTTCGACACTCGTGTTGCCTCATTCTCTCAAACCTTGCATATGTCTCGATTTATCTTCAATGTACACTCCTAGTGTATTGGTTGATGCATCATCCTCCTTCTCAATTGCATCATAACACTTTTCAATCTTGGCCCAATCATGGTCGGATGGGCGCCACTTAAAGGTCGTCCATTGTTTGCCTTGATGTGTGAGAGTCACGAGCTACTTTCTCTCAGTGAGCTTGTGACACTCTCCCCACTACATCTAGTCATCGTACTCGATGACTGTCTCGAAACAAAATTGTATTGTCAGATGTGACAGCACAAATTAAGAGGTTGTGACGCTCTCCTTAATCTAGTCGTTGTCTCGTTGATTTTTTCAGGGATCATATGGTATGGCCGATTGTTTGAAACTGAGAAAAGCTATTGGAGTTGCTGAATTTTCTGAACCGACGTCGTATTGCGTCGGTGGTCCCAGATAAGGATAGCCCTATGCTGGATAATATTAGCAAAGATTCATGCTTCCACGTATTTTTATTATGATATTGAGATATCAAATATAATTATATGTGGTGGCCCACAAATATAATATTTTAATACGTCTCTCTGTCTCTCTCTTTCCTTCTTCTTTCACCTCTCTTCAGTGAGAGAAGAAACTCTGTTATCCGTCCAAATCTGGTTCTTTCTTTGATTCAGTGGGAAAAGGCGAGGGCATAATTTCTCAGTATTTCTTAAAATCGATTCTGCGGCAGTGGTTCGAAGATTTTGATTTCTCTTATTTCTTCTTATTGTCGTTGATCGATATGAAGGACGACGATGTCCTTCCAACGACGATAGCGAGTGCCGGGAAGAAAGATAGCTCGGTTTCGAGTATATTCGGCAAAGGACGCTACAAGTTCTGGGCCTTGACTGCCATTTTGTTGCTCGCATTTTGGTCCATGTTCACCGGCACCGTCTCTCTTCGATGGTCCGCCGGTAATCTCAACGGTCTATCTGATGATATCGATTTTAACCTCCCTAATGATCTCGATGTGCTTGTTAGTATCTCTCTCTCTGTAATTATTATTGATGTCTGAGCCAGATCTTCATCGAATTTAACACATCGATTTCATGGTTTTCCCTCCAATTTTTGGTTTTGAATTTTAGGAAATGGAGGAAAGGGAGAAGATAGTGAAACACATGTGGGACGTTTACACAAATAATCGCCGGATCAGGTTACCGCGTTTCTGGCAAGAGGCATTCGAGGCTGCGTACGAGGACCTGACCAGTGAAATGCCTGGTGATAGAGAGGCTGCTATCTCCGAGATCGCCCGGATGTCTATGCACTCCATTGTTCTTGATACGCCTTCGGAGCAATCCACGGTTGGTTATTTACTCTCTGATACATACGTTTTAATAGCCCCTGATGATCTTATGTTCGTAGCACACGAAAAGGGTATCTAGGGCATTCTATGAACTATAATTACAAACCAGCAACAGTTGGAGTTGAGTTTTTTTTTTTTTCCCGCTCCTAAGTCTTGAGTGTTGCAATTCTTATAGTTATTAGGTGGGAAGTTTTCTTAAAACTAAATGCTAATGGTACGGCCTCTCCCTCCCCACCCCTCATTTTGACATGGTTAATATTCTTCATATTCATCTGAGATTGCACCTTTTGGGATAACTGAGGACTACCTGGAACAGATTTCATGTTAGTTTTGAGTACACTCTTCGTGTATGTGGATGGGGGTTCAGTTTCGGTTGCGATTGCATATTTGCAGTTGACTATGATTCTCATTGAACTCGTAAGAAGTTAGGGAATGATACATAATGTTTAGCATGATACAACGGTCAAATATTGCTTGGAGGAGTATTGTTTAACATGACATGCGGGCAAGGTTCTAGCGGGCAGTTGGATTCCTAGTACTTCCTGTGTGTTTCGTGTTTCCTTGTAGTTTCAATTTTGTGAAAGCTATGGTAAATTTATAAGCTATAACAAGTTTGCACTAAAGCACATTAATGTTTAGAAAAATAAACCAATTGACTATCTAGTACAGCCCTGTGTTTCCATTTGATGAATGGGATCTTAATCCTGACTTCTGATGTCGTTTCCTATTCAGAAACTTGGTAACTCGTATAACTCTTTAGCATTGTAGATAATTTTCCCATACATCATCGGTAAATCAATTTTATCGAGTGTCCCCAAAGGGATAAATTTGGGATTCTTTATCAAAGGCTTGATATCTTGTATAAGGCAGCAATGATTGACATGTCTAAGTTTTGCAACGGTTTTTACCTGCTTGCGTGCCTCCCTCCACAACCAATTGTTGATGGGTAGATGGCCACTCACTTTCCATCCTTGCTTAGCTGCCTGATAATGAACTAGTGATCTCAAATAGGAAACTACAGTTTGTTCTTCGATGATCACTAGCTTATAAAGACATGGAGGTTTTTATCCTCTGTGCTGTCTTGCAGCCTAAAAAAGAAAGTCTTTTTTCCAAATATAGAGTTGTTTTTTAGAGGTATGATATGGGGATTTGTAAAAGTTGGGAGGAACTAGCTTTGGCTACCTGATTTAAATTATAAGAGTTGAAGCTATATTATCGTTTTCACTTAGCTGCCTGGTAGAGAATTGTAGTGGTCTCAAACAGGTGACTACTGCTTGTTCTTCAATGATCACTAGCTTTTTAAGGACAGTGAGGTCTGTTGTCCTCTATACCACTCTGCAGCCTAAAAAAGATTAAGCTCTTTTAGATAATTTTGCAAACTGTGAACTGATTACCAGGGTGTGATCTTGCAATTTATATAAGTTGAGGTTATCTTGTACCTGAATATATTGTTATGATATCCCACATTGGTTGGGGAGGAGAACGAAACCCCCTTTATAAGGGTGTGGAAAACTTTCCCTACCAGACGCGTTTTTAAACCCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAGAGGACAATATATGCTAGTGGTGGACCTAGGCCATTACAAATCGTATCAGAGCCAGACACCGGACAATGTGCTAGCGAGGAGGCGGTGTTGCCAGTAAGGACCCCCAAAGGGGGTGGATTTGGCAGAGTCCCACATTGATTAGAGAAAGGAACGAGTGCTAGTGAGGACGATGGGCCTTGAAGGGAGGTGAATTATGATATCCCACATTGGTTGGGGAAGAGAATGAAATACCCTTTATAAGGGTGTGGAAACCTTTTCCTAGCAAGCGCTTTAAAGTCTTGAGGGGAAGCCTGAAAGGTAAAGCCCAAAGAGGACAATATCTGCTATAGCTGTGTCATTAGAAATCCTTGGTTGAATAGGCTTCAAAAACCGATAAAGGCAATCCTGTATTTGATCAAAGCTTGTGTCATATAGAAATGATTAACTATTCTTGGGAAAATTTTCATTTTTCCTTTCTCATGTTTCTTTCCTTGTCAAGGTACTCTAACCTCTGTGCTCTTTACTTTTCTTATACTTATTATCAGAGTGCACGAGAGTTCACAAAGATGCAGAAAATAGCAGATAAAAGCAGGGGGACAGCTATCAAAACTGGGAGTAAGCTGTGACATGGGTGATGTTCATGATGATCCAAGGTTCGATGCCTCTCTACTCTGCCTTTAAAGCCACTAGATTGCTGTCTGAAGTTGTTTGTAGGAGGCAGTGACTGGCAAGTCTACATTCTTTCAAACTTTGATTTTTTTCCGTTTTGCTTACAGTATATTGCAAGATGGGTCAAACAGCCTTTTTGCGTAGAATTTTAGAGTGATATTTGGTAATGTTCTTTATAAAGGTGAAAGATGAGTATTGAAAGTCTCACATTCGACAATCATTTAAACATGTAGAAGAGCATCATAAACTATTATACTTCCAACCCGTTGTTTGCATGGTTCAATTTGTTTCTCTGTGGTTGGAACTTTGGATAATTTCAACTACGGATGCTTTGGTCGTCTGAGTGTCTATGTTAATGTCTCATGTTACAAGGTTATGAAACTTAGATTTCCTATTTGATAAGGTTGTTAGATTTTTACGTTCACATTGATCTTCCTGCGGCATCCTTTGTCTAAAGTTTTATACATCTTAATTTCTGATAGAATGAATTATTATTTTGAAGATCCCTACATTTTGAAGATGTCAAAAATGTCAAATAGTTTAGTCTCCTCTCTCGCCTGAACGACTACTCTCTCTACGCTAAAACCTTGGAACGTCGATGGCTTTTGATTACGAGACAATAATGATGGAAACTTTAGAGTATAAGTACCAACGACGATGTTGGAATCGACCCACAACTCTA

mRNA sequence

ATGGTGGCATCAATGGCCGGCACCACCGACAATGGTTGGCGGAGAGCTGGAGGCGACCCATCCACTTGCGGTGGTTGTTTGGTGGCTGACAATGGAACGGCAGCAGGCTCTTCTTTCTCTTTTCCTTCGCCTCCCTTCTTCTTCATATATCGCTCTGCTACAACCCTCGTCGGCACGCGCTCTCCACCCATCGTTATTGTTTGTTTTCTTTCTTCTTTTTCTATCTTCCTCTCTGCTGAACCGCCCCGGCACGCCGTCCTCTGTTTTGCTGCAACCGCACGACTGCCCGCCGCCTTCTTCTACAACTGCTCATCGTTGAGGAGTATAACTATGGCTGGAGAAGCAGGATTGTTTGCTGTTCAACAGACCATTGGCAGTGTCTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGCGTCAAATGCTTGTGTTCTGAAGTTGATATCACAGAAGGTCTACAGAAGCAATTGACTATTATGCATTGTCCAGATTGCGAGAGTTACTTGCAGCCACCCCGAACTTGGCTTAAAGCGCAATTAGAATCGAAGGAACTACTGACATTCTGTATCAAAAGGTTAAAAAATTTGAATAAGGTTAAACTGGTACATGCTGAATTTGTTTGGACTGAACCCCATTCCAAGAGGATCAAGGTCAAGCTGAAGGTTCAGAAAGAGGTCCTACATGGGGCAATTTTGGAACAGTCCTATGTCGCGGAGTATGTTGTACAGGATCACTTGTGCGAGTCTTGTGCAAGGGTCCAGGCCAACCCTGACCAGTGGGTAGCTTCTGTTCAACTCAGGCAGCACGTCCCTCACCGCCGTACATTTTTCTTCTTGGAGCAACTGATACTGAAGCATGGTGCTGCTGCCAATGCCATAAGGATCAAACAGATGGATGAAGGTATTGACTTTTTCTTTTCTAATAGGAGTCATGCTGTAAAGTTTGTGGAATTTATTGGAAAGGTTGCTCCAATCAGGAGCCGCAGCGATAAACAACTCGTTTCTCATGATTCTAAGAGTAACGTTCACAACTATAAGCACACTTTCTCCGTTGAAATATCGCCAATATGCCGTGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTGGGCAATCTTGGTCCTCTCGTAATTTGCACCAAAGTTACAAATGCGATTGCTTTACTTGATCCATTCACATTAAGGTACTGCTTCTTGGATGCTGATCAGTATTGGAGGACATCCTTTAGGTCTTTACTCACAAGCAGGCAGCTTGTGGAATATGTTGTACTAGATATTGAGAATGTTTCTACTGAAGTCAATGTTGCTGGTTCTAAGTATATGTTGGCCTATGCTCAAGTAGCTCGCGTATCAGATTTTGGAAGGAACGACACGATATTCTCCATAAGAACCCATCTTGGTCATATTTTGAACCCTGGGGATTATGCCCTTGGTTATGATCTTTATGCAGCCAATAGTAATGATATGGAGATAGAAAAATACAAGGGTCTCGAACTTCCGGAGGCGATTTTAATCAAGAAGAGTTATGAAGAAAAGCGCCAGAGGAAGCGTGGAAAGCCTCGAGCATGGAAGCTTAAATCGCTTGAGATGGATGTTGATGATAGAGGTAGAGCAGAGGAAGATAAGAAAAACTCGGAGTATGAACAGTTTTTGAGAGACTTAGAGGAGAATCCAGATTTGAGGTTCAACATATCATTGTACCGAAATAGAGAATATCAACCATCTGAAATGACTGATGGGGAAGATGGACCTTCAGTACCACTAGAAGAGTTGCTTGCTGATCTTGATTTAGATGAAGGAGATGGAGACGGAGACGATGGCATGGACGATGTTCGTAACGGGTTATTGCTTGTAATTTTCATTCATACGGCATCTGATTTTTTTAAGGGATCATATGGTATGGCCGATTGTTTGAAACTGAGAAAAGCTATTGGAGTTGCTGAATTTTCTGAACCGACGTCGTATTGCGTCGTGGGAAAAGGCGAGGGCATAATTTCTCAGTATTTCTTAAAATCGATTCTGCGGCAGTGGTTCGAAGATTTTGATTTCTCTTATTTCTTCTTATTGTCGTTGATCGATATGAAGGACGACGATGTCCTTCCAACGACGATAGCGAGTGCCGGGAAGAAAGATAGCTCGGTTTCGAGTATATTCGGCAAAGGACGCTACAAGTTCTGGGCCTTGACTGCCATTTTGTTGCTCGCATTTTGGTCCATGTTCACCGGCACCGTCTCTCTTCGATGGTCCGCCGGTAATCTCAACGGTCTATCTGATGATATCGATTTTAACCTCCCTAATGATCTCGATGTGCTTGTTAGTATCTCTCTCTCTGAAATGGAGGAAAGGGAGAAGATAGTGAAACACATGTGGGACGTTTACACAAATAATCGCCGGATCAGGTTACCGCGTTTCTGGCAAGAGGCATTCGAGGCTGCGTACGAGGACCTGACCAGTGAAATGCCTGGTGATAGAGAGGCTGCTATCTCCGAGATCGCCCGGATGTCTATGCACTCCATTGTTCTTGATACGCCTTCGGAGCAATCCACGGTTGGTTATTTACTCTCTGATACATACGTTTTAATAGCCCCTGATGATCTTATGTTCGTAGCACACGAAAAGGATTTCATGTTAGTTTTGAGTACACTCTTCGTGTATGTGGATGGGGGTTCAGTTTCGGTTGCGATTGCATATTTGCAGTTGACTATGATTCTCATTGAACTCAGTGCACGAGAGTTCACAAAGATGCAGAAAATAGCAGATAAAAGCAGGGGGACAGCTATCAAAACTGGGAGTAAGCTGTGACATGGGTGATGTTCATGATGATCCAAGTATATTGCAAGATGGGTCAAACAGCCTTTTTGCGTAGAATTTTAGAGTGATATTTGGTAATGTTCTTTATAAAGGTGAAAGATGAGTATTGAAAGTCTCACATTCGACAATCATTTAAACATGTAGAAGAGCATCATAAACTATTATACTTCCAACCCGTTGTTTGCATGGTTCAATTTGTTTCTCTGTGGTTGGAACTTTGGATAATTTCAACTACGGATGCTTTGGTCGTCTGAGTGTCTATGTTAATGTCTCATGTTACAAGGTTATGAAACTTAGATTTCCTATTTGATAAGGTTGTTAGATTTTTACGTTCACATTGATCTTCCTGCGGCATCCTTTGTCTAAAGTTTTATACATCTTAATTTCTGATAGAATGAATTATTATTTTGAAGATCCCTACATTTTGAAGATGTCAAAAATGTCAAATAGTTTAGTCTCCTCTCTCGCCTGAACGACTACTCTCTCTACGCTAAAACCTTGGAACGTCGATGGCTTTTGATTACGAGACAATAATGATGGAAACTTTAGAGTATAAGTACCAACGACGATGTTGGAATCGACCCACAACTCTA

Coding sequence (CDS)

ATGGTGGCATCAATGGCCGGCACCACCGACAATGGTTGGCGGAGAGCTGGAGGCGACCCATCCACTTGCGGTGGTTGTTTGGTGGCTGACAATGGAACGGCAGCAGGCTCTTCTTTCTCTTTTCCTTCGCCTCCCTTCTTCTTCATATATCGCTCTGCTACAACCCTCGTCGGCACGCGCTCTCCACCCATCGTTATTGTTTGTTTTCTTTCTTCTTTTTCTATCTTCCTCTCTGCTGAACCGCCCCGGCACGCCGTCCTCTGTTTTGCTGCAACCGCACGACTGCCCGCCGCCTTCTTCTACAACTGCTCATCGTTGAGGAGTATAACTATGGCTGGAGAAGCAGGATTGTTTGCTGTTCAACAGACCATTGGCAGTGTCTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGCGTCAAATGCTTGTGTTCTGAAGTTGATATCACAGAAGGTCTACAGAAGCAATTGACTATTATGCATTGTCCAGATTGCGAGAGTTACTTGCAGCCACCCCGAACTTGGCTTAAAGCGCAATTAGAATCGAAGGAACTACTGACATTCTGTATCAAAAGGTTAAAAAATTTGAATAAGGTTAAACTGGTACATGCTGAATTTGTTTGGACTGAACCCCATTCCAAGAGGATCAAGGTCAAGCTGAAGGTTCAGAAAGAGGTCCTACATGGGGCAATTTTGGAACAGTCCTATGTCGCGGAGTATGTTGTACAGGATCACTTGTGCGAGTCTTGTGCAAGGGTCCAGGCCAACCCTGACCAGTGGGTAGCTTCTGTTCAACTCAGGCAGCACGTCCCTCACCGCCGTACATTTTTCTTCTTGGAGCAACTGATACTGAAGCATGGTGCTGCTGCCAATGCCATAAGGATCAAACAGATGGATGAAGGTATTGACTTTTTCTTTTCTAATAGGAGTCATGCTGTAAAGTTTGTGGAATTTATTGGAAAGGTTGCTCCAATCAGGAGCCGCAGCGATAAACAACTCGTTTCTCATGATTCTAAGAGTAACGTTCACAACTATAAGCACACTTTCTCCGTTGAAATATCGCCAATATGCCGTGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTGGGCAATCTTGGTCCTCTCGTAATTTGCACCAAAGTTACAAATGCGATTGCTTTACTTGATCCATTCACATTAAGGTACTGCTTCTTGGATGCTGATCAGTATTGGAGGACATCCTTTAGGTCTTTACTCACAAGCAGGCAGCTTGTGGAATATGTTGTACTAGATATTGAGAATGTTTCTACTGAAGTCAATGTTGCTGGTTCTAAGTATATGTTGGCCTATGCTCAAGTAGCTCGCGTATCAGATTTTGGAAGGAACGACACGATATTCTCCATAAGAACCCATCTTGGTCATATTTTGAACCCTGGGGATTATGCCCTTGGTTATGATCTTTATGCAGCCAATAGTAATGATATGGAGATAGAAAAATACAAGGGTCTCGAACTTCCGGAGGCGATTTTAATCAAGAAGAGTTATGAAGAAAAGCGCCAGAGGAAGCGTGGAAAGCCTCGAGCATGGAAGCTTAAATCGCTTGAGATGGATGTTGATGATAGAGGTAGAGCAGAGGAAGATAAGAAAAACTCGGAGTATGAACAGTTTTTGAGAGACTTAGAGGAGAATCCAGATTTGAGGTTCAACATATCATTGTACCGAAATAGAGAATATCAACCATCTGAAATGACTGATGGGGAAGATGGACCTTCAGTACCACTAGAAGAGTTGCTTGCTGATCTTGATTTAGATGAAGGAGATGGAGACGGAGACGATGGCATGGACGATGTTCGTAACGGGTTATTGCTTGTAATTTTCATTCATACGGCATCTGATTTTTTTAAGGGATCATATGGTATGGCCGATTGTTTGAAACTGAGAAAAGCTATTGGAGTTGCTGAATTTTCTGAACCGACGTCGTATTGCGTCGTGGGAAAAGGCGAGGGCATAATTTCTCAGTATTTCTTAAAATCGATTCTGCGGCAGTGGTTCGAAGATTTTGATTTCTCTTATTTCTTCTTATTGTCGTTGATCGATATGAAGGACGACGATGTCCTTCCAACGACGATAGCGAGTGCCGGGAAGAAAGATAGCTCGGTTTCGAGTATATTCGGCAAAGGACGCTACAAGTTCTGGGCCTTGACTGCCATTTTGTTGCTCGCATTTTGGTCCATGTTCACCGGCACCGTCTCTCTTCGATGGTCCGCCGGTAATCTCAACGGTCTATCTGATGATATCGATTTTAACCTCCCTAATGATCTCGATGTGCTTGTTAGTATCTCTCTCTCTGAAATGGAGGAAAGGGAGAAGATAGTGAAACACATGTGGGACGTTTACACAAATAATCGCCGGATCAGGTTACCGCGTTTCTGGCAAGAGGCATTCGAGGCTGCGTACGAGGACCTGACCAGTGAAATGCCTGGTGATAGAGAGGCTGCTATCTCCGAGATCGCCCGGATGTCTATGCACTCCATTGTTCTTGATACGCCTTCGGAGCAATCCACGGTTGGTTATTTACTCTCTGATACATACGTTTTAATAGCCCCTGATGATCTTATGTTCGTAGCACACGAAAAGGATTTCATGTTAGTTTTGAGTACACTCTTCGTGTATGTGGATGGGGGTTCAGTTTCGGTTGCGATTGCATATTTGCAGTTGACTATGATTCTCATTGAACTCAGTGCACGAGAGTTCACAAAGATGCAGAAAATAGCAGATAAAAGCAGGGGGACAGCTATCAAAACTGGGAGTAAGCTGTGA

Protein sequence

MVASMAGTTDNGWRRAGGDPSTCGGCLVADNGTAAGSSFSFPSPPFFFIYRSATTLVGTRSPPIVIVCFLSSFSIFLSAEPPRHAVLCFAATARLPAAFFYNCSSLRSITMAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNYKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIRTHLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAWKLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLEELLADLDLDEGDGDGDDGMDDVRNGLLLVIFIHTASDFFKGSYGMADCLKLRKAIGVAEFSEPTSYCVVGKGEGIISQYFLKSILRQWFEDFDFSYFFLLSLIDMKDDDVLPTTIASAGKKDSSVSSIFGKGRYKFWALTAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNLPNDLDVLVSISLSEMEEREKIVKHMWDVYTNNRRIRLPRFWQEAFEAAYEDLTSEMPGDREAAISEIARMSMHSIVLDTPSEQSTVGYLLSDTYVLIAPDDLMFVAHEKDFMLVLSTLFVYVDGGSVSVAIAYLQLTMILIELSAREFTKMQKIADKSRGTAIKTGSKL

Homology

[Close]

BLAST of CmaCh03G007610 vs. ExPASy Swiss-Prot
Match: Q6P2Z6 (60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 5.2e-128
Identity = 234/496 (47.18%), Postives = 337/496 (67.94%), Query Frame = 0


Query: 125 GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWLKAQ 184
           G++LCC+CGIP+ PN ANMCV CL  +VDI+EG+ KQ+++  C  CE YLQPP TW++  
Sbjct: 13  GNILCCQCGIPIPPNPANMCVSCLRMQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72

Query: 185 LESKELLTFCIKRLK-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVA 244
           LES+ELLT C+K+LK NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GAIL+Q +V 
Sbjct: 73  LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132

Query: 245 EYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAANAIRIKQM 304
           +Y+VQ  +C+ C RV+A  D W A VQ+RQ V H++TF++LEQ ILKH    N +R+K++
Sbjct: 133 DYIVQSQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192

Query: 305 DEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNYKHTFSVEISPICR 364
            +G+DF+++++ HA K VEF+    P R ++ ++L+SHD  +N +NYK TFSVEI P+C+
Sbjct: 193 HDGLDFYYASKQHAQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252

Query: 365 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQYWRTSFRSLLTSR 424
           ++L+CL PK+A SLGN+  + IC +VT+ I L+DP TL+   +D + YWR+ F SL   +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICVRVTSTIHLIDPSTLQIAEVDGNTYWRSPFNSLFHPK 312

Query: 425 QLVEYVVLDIENVSTEVNVAG-----SKYMLAYAQVARVSDFGRNDTIFSIRTHLGHILN 484
           QL E++V+D + V      AG     +K++LA   V + S+       +  RTHLGH+LN
Sbjct: 313 QLEEFIVMDTDIVRDRKQAAGAGMRSNKHILAEVWVQKTSEMNTTQQ-YHCRTHLGHLLN 372

Query: 485 PGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEE-KRQRKRGKPRAWKLKSLEM 544
           PGD  LG+DL   N ND  I K     +P+ +LIKKSY+  KRQR+R     WKLK +E 
Sbjct: 373 PGDLVLGFDLANCNLNDEFINKMNPHHIPDVVLIKKSYDRTKRQRRRN----WKLKEIER 432

Query: 545 DVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLEE 604
           D +  G   +D++  +Y+ FL DLEE+  +R N+++Y+N        TD E  P + L E
Sbjct: 433 DRE--GMDTDDER--QYQDFLEDLEEDEVIRKNVNIYKNANLPVESDTDEEGAPRISLAE 492

Query: 605 LLADL--DLDEGDGDG 612
           +L DL   LD   G+G
Sbjct: 493 MLEDLHISLDATGGEG 498

[Close]

BLAST of CmaCh03G007610 vs. ExPASy Swiss-Prot
Match: Q6GNS3 (60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 8.9e-128
Identity = 232/496 (46.77%), Postives = 338/496 (68.15%), Query Frame = 0


Query: 125 GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWLKAQ 184
           G++LCC+CGIP+ PN ANMCV CL ++VDI+EG+ KQ+++  C  CE YLQPP TW++  
Sbjct: 13  GNILCCQCGIPIPPNPANMCVACLRTQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72

Query: 185 LESKELLTFCIKRLK-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVA 244
           LES+ELLT C+K+LK NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GAIL+Q +V 
Sbjct: 73  LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132

Query: 245 EYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAANAIRIKQM 304
           +YVVQ  +C+ C RV+A  D W A VQ+RQ V H++TF++LEQ ILKH    N +R+K++
Sbjct: 133 DYVVQAQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192

Query: 305 DEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNYKHTFSVEISPICR 364
            +G+DF+++++ H  K VEF+    P R ++ ++L+SHD  +N +NYK TFSVEI P+C+
Sbjct: 193 HDGLDFYYASKQHGQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252

Query: 365 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQYWRTSFRSLLTSR 424
           ++L+CL PK+A SLGN+  + IC +VT+ I L+DP TL+   +D + YWR  F SL   +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICARVTSTIHLIDPSTLQIAEVDGNTYWRYPFNSLFHPK 312

Query: 425 QLVEYVVLDIENVSTEVNVAG-----SKYMLAYAQVARVSDFGRNDTIFSIRTHLGHILN 484
           Q+ E++V+D E +      AG     +K++LA   V + S+       +  RTHLGH+LN
Sbjct: 313 QMEEFIVMDTEIIRDRKQAAGAGMRSNKHVLAEVWVQKTSEMNTTQQ-YHCRTHLGHLLN 372

Query: 485 PGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAWKLKSLEMD 544
           PGD  LG+DL   N ND  I K     +P+ +LIKKSY+  R+++R   R WKLK  EMD
Sbjct: 373 PGDLVLGFDLSNCNLNDEFINKMNPHHIPDVVLIKKSYDRARRQRR---RNWKLK--EMD 432

Query: 545 VDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLEEL 604
            D  G   +D++  +Y+ FL DLEE+  LR N+++++N        TD E  P + L E+
Sbjct: 433 RDREGMDTDDER--QYQDFLEDLEEDELLRKNVNIFKNANVPVESDTDEEGAPRISLAEM 492

Query: 605 LADLDLDEGDGDGDDG 615
           L DL + + D  G++G
Sbjct: 493 LEDLHISQ-DATGEEG 498

[Close]

BLAST of CmaCh03G007610 vs. ExPASy Swiss-Prot
Match: Q5BLF0 (60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 6.0e-124
Identity = 230/502 (45.82%), Postives = 338/502 (67.33%), Query Frame = 0


Query: 125 GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWLKAQ 184
           G++LCC CG+P+ PN ANMCV CL ++VDI+EG+ KQ+TI  C  CE YLQPP +W++  
Sbjct: 13  GNILCCTCGVPIPPNPANMCVSCLRTQVDISEGIPKQVTIHFCRQCERYLQPPGSWVQCA 72

Query: 185 LESKELLTFCIKRLK-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVA 244
           LES+ELL  C+K+LK +++KV+L+ A F+WTEPHSKRIK+KL +QKEV++GAIL+Q +  
Sbjct: 73  LESRELLALCLKKLKASMSKVRLIDAGFLWTEPHSKRIKIKLTIQKEVMNGAILQQVFTV 132

Query: 245 EYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAANAIRIKQM 304
           E+VVQ  +CE C RV+A  D W A VQ+RQ   H++TF++LEQLILKH    N +RIK++
Sbjct: 133 EFVVQGQMCEDCHRVEAK-DFWKAVVQVRQKTVHKKTFYYLEQLILKHKLHQNTVRIKEI 192

Query: 305 DEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNYKHTFSVEISPICR 364
            EGIDF+++ + HA K V+F+    P RS++ ++L+SHD  SN +NYK TFSVEI P+C+
Sbjct: 193 HEGIDFYYATKQHAQKMVDFLQCTVPCRSKASQRLISHDVHSNTYNYKSTFSVEIVPVCK 252

Query: 365 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQYWRTSFRSLLTSR 424
           ++++CL P++A SLGN+G + +C +VT++I L+DP TL+   +D   +WR  F SL + R
Sbjct: 253 DNVVCLSPRLAQSLGNMGQVCVCVRVTSSIHLIDPNTLQIAEVDGSTFWRHPFNSLCSPR 312

Query: 425 QLVEYVVLDIENVSTEVNVAG-----SKYMLAYAQVARVSDFGRNDTIFSIRTHLGHILN 484
           QL E++++DI+ +  +   AG     +K+ LA   V + S+   +   +  RT +GH+LN
Sbjct: 313 QLEEFIIMDIDIIRDQRLGAGAGLKSNKHTLAEVWVQKTSEMDSSHQ-YHCRTFMGHLLN 372

Query: 485 PGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAWKLKSLEMD 544
            GD  LG+D   AN ND  + K     +P+ +LIKKSY+   + KR + R WKLK ++ +
Sbjct: 373 IGDLVLGFDFANANINDEFLNKMNPQHVPDVVLIKKSYD---RMKRARKRVWKLKEMDRE 432

Query: 545 VDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGED--GPSVPLE 604
            D    A +     +Y +FL DLEE+  LR NI+++R+    P E +D +D   P + L 
Sbjct: 433 KD----AADTDDERQYTEFLEDLEEDEMLRKNINIFRDASKIPVEESDTDDDGAPRISLA 492

Query: 605 ELLADLDL-DEGDGDGDDGMDD 618
           E+L DL L D   G+G D M D
Sbjct: 493 EMLEDLSLSDATGGEGADMMTD 505

[Close]

BLAST of CmaCh03G007610 vs. ExPASy Swiss-Prot
Match: Q08DS5 (60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.5e-122
Identity = 226/501 (45.11%), Postives = 331/501 (66.07%), Query Frame = 0


Query: 120 VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRT 179
           V+ T G +LCC CG+P++PN AN+CV CL S+VDI++G+ KQ++I  C  C+ Y QPP T
Sbjct: 8   VKHTPGHILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGT 67

Query: 180 WLKAQLESKELLTFCIKRLK-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILE 239
           W++  LES++LL  C+K++K  L+KV+LV A FVWTEPHSKR+KVKL +QKEV++GAIL+
Sbjct: 68  WVQCALESRDLLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQ 127

Query: 240 QSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAANAI 299
           Q +V +YVVQ  +C  C RV+A  D W A VQ+RQ   H++TF++LEQLILK+G   N +
Sbjct: 128 QVFVVDYVVQPQMCGDCHRVEAK-DFWKAVVQVRQKTLHKKTFYYLEQLILKYGMHQNTL 187

Query: 300 RIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNYKHTFSVEI 359
           RIK++ +G+DF++S++ HA K VEF+    P R ++ ++L+S D  SN +NYK TFSVEI
Sbjct: 188 RIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEI 247

Query: 360 SPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQYWRTSFRS 419
            PIC+++++CL PK+A SLGN+  + +C +VT+ I L+DP TL+   +D + +W   F S
Sbjct: 248 VPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWSHPFNS 307

Query: 420 LLTSRQLVEYVVLDIENVSTEVNVAGS-----KYMLAYAQVARVSDFGRNDTIFSIRTHL 479
           L   +QL E++V++   V      AG+     K+ L    V + S+    D  +  RTHL
Sbjct: 308 LCHPKQLEEFIVMECSIVQDIKRSAGAGMISKKHTLGEVWVQKTSEM-NTDKQYFCRTHL 367

Query: 480 GHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAWKLK 539
           GH+LNPGD  LG+DL   N ND  + K K   +P+ +LIKKSY+  R+++R   R WKLK
Sbjct: 368 GHLLNPGDLVLGFDLVNCNLNDEHVNKMKSDRVPDVVLIKKSYDRTRRQRR---RNWKLK 427

Query: 540 SLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSV 599
            L  D ++    +E     +Y+ FL DLEE+  +R N+++YR+        TD E  P +
Sbjct: 428 ELARDRENTDTDDE----RQYQDFLEDLEEDEAIRKNVNIYRDSTIPVESDTDDEGAPRI 487

Query: 600 PLEELLADLDLDEGDGDGDDG 615
            L E+L DL + + D  G +G
Sbjct: 488 SLAEMLEDLHISQ-DATGGEG 498

[Close]

BLAST of CmaCh03G007610 vs. ExPASy Swiss-Prot
Match: Q55BF2 (60S ribosomal export protein NMD3 OS=Dictyostelium discoideum OX=44689 GN=nmd3 PE=3 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.9e-122
Identity = 222/458 (48.47%), Postives = 319/458 (69.65%), Query Frame = 0


Query: 126 SVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWLKAQL 185
           ++LCC CG+ +  N +NMCV C+ S+VDITEG+ KQLTI  C  C  YLQPP  W  A+L
Sbjct: 11  NILCCMCGVLIPANPSNMCVDCIKSQVDITEGIPKQLTIQWCRGCARYLQPPNHWAIAEL 70

Query: 186 ESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVAEY 245
           ES+ELLT CIKR+K LNKVKLV A +VWTEPHSKR+KVKL +QKEV   AIL+Q ++ E+
Sbjct: 71  ESRELLTICIKRIKGLNKVKLVDAGWVWTEPHSKRLKVKLTIQKEVFTSAILQQIFIIEF 130

Query: 246 VVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAANAIRIKQMDE 305
           +VQ   C+ C + +A  D W + VQLRQ V H+RTF ++EQLILKH A +  + IK+  +
Sbjct: 131 IVQGQQCDKCQKFEAK-DTWNSVVQLRQKVDHKRTFLYIEQLILKHNAHSQTLNIKEKPD 190

Query: 306 GIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNYKHTFSVEISPICRED 365
           G+DFFFSNR+HA+KFVEFI  + P++++  +QL+S D ++N  NYK+TFSVEI P+ ++D
Sbjct: 191 GLDFFFSNRNHAMKFVEFISAITPVKTKKSEQLISSDEQNNAANYKYTFSVEIVPLSKDD 250

Query: 366 LICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQYWRTSFRSLLTSRQL 425
           ++CLPPK+A  LGN+GPLV+ TKV+N I  +DP TL    + A  +W + FR+L + +QL
Sbjct: 251 IVCLPPKIAHQLGNMGPLVVVTKVSNLIHFIDPNTLHTGEISALTFWNSPFRALSSYKQL 310

Query: 426 VEYVVLDIENVSTEVNVAGS---KYMLAYAQVARVSDFGRNDTIFSIRTHLGHILNPGDY 485
           VE+ VLD       VN+ G+   +Y L+  Q+ R +DFG ND I+ IR+HLG+ILNPGD 
Sbjct: 311 VEFTVLD-------VNLTGATRGRYALSDIQLMRSADFGANDNIYDIRSHLGNILNPGDL 370

Query: 486 ALGYDLYAANSNDMEIE-KYKGLELPEAILIKKSYEEKRQRKRGKPRAWKLKSLEMD-VD 545
           ALGYD+ ++N  D ++    K  +LP+ +L+KK+Y  K   +    R W  K +  + ++
Sbjct: 371 ALGYDVASSNFPDSDLAGMKKNQQLPDFVLVKKTYPSKNDFR--FKRHWYFKEIPKEGIE 430

Query: 546 DRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNRE 579
           +  + E D+   + E+FLR++E +P+LR  I++Y+  +
Sbjct: 431 NPKKFEIDQMERDREEFLREIEADPELRSKINIYKEAD 458

[Close]

BLAST of CmaCh03G007610 vs. ExPASy TrEMBL
Match: A0A6J1IT79 (60S ribosomal export protein NMD3 OS=Cucurbita maxima OX=3661 GN=LOC111478443 PE=3 SV=1)

HSP 1 Score: 1011.9 bits (2615), Expect = 1.7e-291
Identity = 506/507 (99.80%), Postives = 507/507 (100.00%), Query Frame = 0


Query: 111 MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 170
           MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 171 ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 230
           ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 231 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 290
           VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 291 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 350
           HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY
Sbjct: 181 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240

Query: 351 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 410
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300

Query: 411 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 470
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360

Query: 471 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 530
           THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420

Query: 531 KLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 590
           KLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG
Sbjct: 421 KLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480

Query: 591 PSVPLEELLADLDLDEGDGDGDDGMDD 618
           PSVPLEELLADLDLDEGDGDGDDGMD+
Sbjct: 481 PSVPLEELLADLDLDEGDGDGDDGMDE 507

[Close]

BLAST of CmaCh03G007610 vs. ExPASy TrEMBL
Match: A0A6J1GFH4 (60S ribosomal export protein NMD3 OS=Cucurbita moschata OX=3662 GN=LOC111453698 PE=3 SV=1)

HSP 1 Score: 1008.8 bits (2607), Expect = 1.5e-290
Identity = 504/507 (99.41%), Postives = 507/507 (100.00%), Query Frame = 0


Query: 111 MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 170
           MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 171 ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 230
           ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 231 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 290
           VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 291 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 350
           HGAAA+AIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY
Sbjct: 181 HGAAASAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240

Query: 351 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 410
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300

Query: 411 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 470
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360

Query: 471 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 530
           THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420

Query: 531 KLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 590
           KLKSLEMDVDDRGRA+EDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG
Sbjct: 421 KLKSLEMDVDDRGRADEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480

Query: 591 PSVPLEELLADLDLDEGDGDGDDGMDD 618
           PSVPLEELLADLDLDEGDGDGDDGMD+
Sbjct: 481 PSVPLEELLADLDLDEGDGDGDDGMDE 507

[Close]

BLAST of CmaCh03G007610 vs. ExPASy TrEMBL
Match: A0A5D3CM67 (60S ribosomal export protein NMD3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002220 PE=3 SV=1)

HSP 1 Score: 948.0 bits (2449), Expect = 3.1e-272
Identity = 467/507 (92.11%), Postives = 491/507 (96.84%), Query Frame = 0


Query: 111 MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 170
           MA E GLFAVQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 171 ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 230
           ESYLQPPRTW+KAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 231 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 290
           VLHGAILEQSYV EYVVQDHLCESC+R+QANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 291 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 350
           HGAAA+AIRIKQMD+GIDFFFSNRSH VKFVEF+GKVAPIRSR DKQLVSHD KSN+HN+
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 351 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 410
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLR+CFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 411 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 470
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDT+FSI+
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 471 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 530
           THLGHILNPGDYALGYDLY ANSNDME+EKYKGLELPEAILIKKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 531 KLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 590
           KLKSL MDVDD+ + +E+K NSEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 591 PSVPLEELLADLDLDEGDGDGDDGMDD 618
           PSVPL+ELLADLDL E  G+GDD M++
Sbjct: 481 PSVPLDELLADLDLSE--GEGDDAMNE 505

[Close]

BLAST of CmaCh03G007610 vs. ExPASy TrEMBL
Match: A0A1S3B197 (60S ribosomal export protein NMD3 OS=Cucumis melo OX=3656 GN=LOC103485035 PE=3 SV=1)

HSP 1 Score: 948.0 bits (2449), Expect = 3.1e-272
Identity = 467/507 (92.11%), Postives = 491/507 (96.84%), Query Frame = 0


Query: 111 MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 170
           MA E GLFAVQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 171 ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 230
           ESYLQPPRTW+KAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 231 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 290
           VLHGAILEQSYV EYVVQDHLCESC+R+QANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 291 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 350
           HGAAA+AIRIKQMD+GIDFFFSNRSH VKFVEF+GKVAPIRSR DKQLVSHD KSN+HN+
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 351 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 410
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLR+CFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 411 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 470
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDT+FSI+
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 471 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 530
           THLGHILNPGDYALGYDLY ANSNDME+EKYKGLELPEAILIKKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 531 KLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 590
           KLKSL MDVDD+ + +E+K NSEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 591 PSVPLEELLADLDLDEGDGDGDDGMDD 618
           PSVPL+ELLADLDL E  G+GDD M++
Sbjct: 481 PSVPLDELLADLDLSE--GEGDDAMNE 505

[Close]

BLAST of CmaCh03G007610 vs. ExPASy TrEMBL
Match: A0A5A7SYS9 (60S ribosomal export protein NMD3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00380 PE=3 SV=1)

HSP 1 Score: 946.4 bits (2445), Expect = 8.9e-272
Identity = 466/507 (91.91%), Postives = 490/507 (96.65%), Query Frame = 0


Query: 111 MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 170
           MA E GLFAVQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 171 ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 230
           ESYLQPPRTW+KAQLESKELLTFCIKRL+NLNK KLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKAKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 231 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 290
           VLHGAILEQSYV EYVVQDHLCESC+R+QANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 291 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 350
           HGAAA+AIRIKQMD+GIDFFFSNRSH VKFVEF+GKVAPIRSR DKQLVSHD KSN+HN+
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 351 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 410
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLR+CFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 411 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 470
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDT+FSI+
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 471 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 530
           THLGHILNPGDYALGYDLY ANSNDME+EKYKGLELPEAILIKKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 531 KLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 590
           KLKSL MDVDD+ + +E+K NSEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 591 PSVPLEELLADLDLDEGDGDGDDGMDD 618
           PSVPL+ELLADLDL E  G+GDD M++
Sbjct: 481 PSVPLDELLADLDLSE--GEGDDAMNE 505

[Close]

BLAST of CmaCh03G007610 vs. NCBI nr
Match: XP_022978473.1 (60S ribosomal export protein NMD3-like [Cucurbita maxima] >XP_022978474.1 60S ribosomal export protein NMD3-like [Cucurbita maxima] >XP_022978475.1 60S ribosomal export protein NMD3-like [Cucurbita maxima])

HSP 1 Score: 1011.9 bits (2615), Expect = 3.6e-291
Identity = 506/507 (99.80%), Postives = 507/507 (100.00%), Query Frame = 0


Query: 111 MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 170
           MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 171 ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 230
           ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 231 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 290
           VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 291 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 350
           HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY
Sbjct: 181 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240

Query: 351 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 410
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300

Query: 411 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 470
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360

Query: 471 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 530
           THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420

Query: 531 KLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 590
           KLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG
Sbjct: 421 KLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480

Query: 591 PSVPLEELLADLDLDEGDGDGDDGMDD 618
           PSVPLEELLADLDLDEGDGDGDDGMD+
Sbjct: 481 PSVPLEELLADLDLDEGDGDGDDGMDE 507

[Close]

BLAST of CmaCh03G007610 vs. NCBI nr
Match: XP_022950672.1 (60S ribosomal export protein NMD3-like [Cucurbita moschata])

HSP 1 Score: 1008.8 bits (2607), Expect = 3.0e-290
Identity = 504/507 (99.41%), Postives = 507/507 (100.00%), Query Frame = 0


Query: 111 MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 170
           MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 171 ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 230
           ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 231 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 290
           VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 291 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 350
           HGAAA+AIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY
Sbjct: 181 HGAAASAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240

Query: 351 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 410
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300

Query: 411 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 470
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360

Query: 471 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 530
           THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420

Query: 531 KLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 590
           KLKSLEMDVDDRGRA+EDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG
Sbjct: 421 KLKSLEMDVDDRGRADEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480

Query: 591 PSVPLEELLADLDLDEGDGDGDDGMDD 618
           PSVPLEELLADLDLDEGDGDGDDGMD+
Sbjct: 481 PSVPLEELLADLDLDEGDGDGDDGMDE 507

[Close]

BLAST of CmaCh03G007610 vs. NCBI nr
Match: KAG7034157.1 (60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1007.7 bits (2604), Expect = 6.7e-290
Identity = 503/507 (99.21%), Postives = 507/507 (100.00%), Query Frame = 0


Query: 111 MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 170
           MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 171 ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 230
           ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 231 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 290
           VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 291 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 350
           HGAAA+AIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY
Sbjct: 181 HGAAASAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240

Query: 351 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 410
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300

Query: 411 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 470
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360

Query: 471 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 530
           THLGHILNPGDYALGYDLY+ANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW
Sbjct: 361 THLGHILNPGDYALGYDLYSANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420

Query: 531 KLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 590
           KLKSLEMDVDDRGRA+EDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG
Sbjct: 421 KLKSLEMDVDDRGRADEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480

Query: 591 PSVPLEELLADLDLDEGDGDGDDGMDD 618
           PSVPLEELLADLDLDEGDGDGDDGMD+
Sbjct: 481 PSVPLEELLADLDLDEGDGDGDDGMDE 507

[Close]

BLAST of CmaCh03G007610 vs. NCBI nr
Match: XP_023544705.1 (60S ribosomal export protein NMD3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1003.8 bits (2594), Expect = 9.7e-289
Identity = 504/509 (99.02%), Postives = 507/509 (99.61%), Query Frame = 0


Query: 111 MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 170
           MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 171 ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 230
           ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 231 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 290
           VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 291 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 350
           HGAAA+AIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY
Sbjct: 181 HGAAASAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240

Query: 351 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 410
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300

Query: 411 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 470
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360

Query: 471 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 530
           THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420

Query: 531 KLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 590
           KLKSLEMDVDDRGRA+EDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG
Sbjct: 421 KLKSLEMDVDDRGRADEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480

Query: 591 PSVPLEELLADLDLDEGDGDGD--DGMDD 618
           PSVPLEELLADLDLDEGDGDGD  DGMD+
Sbjct: 481 PSVPLEELLADLDLDEGDGDGDGNDGMDE 509

[Close]

BLAST of CmaCh03G007610 vs. NCBI nr
Match: XP_038883907.1 (60S ribosomal export protein NMD3 isoform X1 [Benincasa hispida])

HSP 1 Score: 976.5 bits (2523), Expect = 1.7e-280
Identity = 501/576 (86.98%), Postives = 522/576 (90.62%), Query Frame = 0


Query: 38  SFSFPSPPFFFIYRSATTLVGTRSPPIVIVCFLSSFSIFLSAEPPRHAVLC-FAATARLP 97
           S SFPS   FF+     ++        V   F S   +  S EP +HAV C  AA ARLP
Sbjct: 40  SLSFPSS--FFLLHILISIF------FVFFFFFSLRFLSPSTEPRQHAVHCSAAAAARLP 99

Query: 98  AAFFYNCSSLRSITMAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITE 157
            AFF         +MA E GLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITE
Sbjct: 100 TAFF---------SMAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITE 159

Query: 158 GLQKQLTIMHCPDCESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEP 217
           GLQKQLTIMHCPDCESYLQPPRTW+KAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEP
Sbjct: 160 GLQKQLTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEP 219

Query: 218 HSKRIKVKLKVQKEVLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVP 277
           HSKRIKVKLKVQKEVLHGAILEQSYV EYVVQDHLCESC+RVQANPDQWVASVQLRQHVP
Sbjct: 220 HSKRIKVKLKVQKEVLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVP 279

Query: 278 HRRTFFFLEQLILKHGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDK 337
           HRRTFFFLEQLILKHGAAA+AIRIKQMD+GIDFFFSNRSH VKFVEFIGKV  IRSR DK
Sbjct: 280 HRRTFFFLEQLILKHGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVVSIRSRHDK 339

Query: 338 QLVSHDSKSNVHNYKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALL 397
           QLVSHD KSN+HN+KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALL
Sbjct: 340 QLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALL 399

Query: 398 DPFTLRYCFLDADQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVAR 457
           DPFTLR+CFLDA+QYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVAR
Sbjct: 400 DPFTLRHCFLDAEQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVAR 459

Query: 458 VSDFGRNDTIFSIRTHLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSY 517
           +SDFGRNDTIFSI+THLGHILNPGDYALGYDLY ANSNDME+EKYKGLELP+AILIKKSY
Sbjct: 460 LSDFGRNDTIFSIKTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPDAILIKKSY 519

Query: 518 EEKRQRKRGKPRAWKLKSLEMDVDDRGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRN 577
           EEKR RKRGKPRAWKLKSLEMDVDD+G+AEEDKKNSEYEQFLRDLEENPDLRFNISLYRN
Sbjct: 520 EEKRLRKRGKPRAWKLKSLEMDVDDKGKAEEDKKNSEYEQFLRDLEENPDLRFNISLYRN 579

Query: 578 REYQPSEMTDGEDGPSVPLEELLADLDLDEGDGDGD 613
           REYQPSEMTDGEDGPSVPLEELLADLDL EG+GD D
Sbjct: 580 REYQPSEMTDGEDGPSVPLEELLADLDLSEGEGDND 598

[Close]

BLAST of CmaCh03G007610 vs. TAIR 10
Match: AT2G03820.1 (nonsense-mediated mRNA decay NMD3 family protein )

HSP 1 Score: 704.5 bits (1817), Expect = 1.1e-202
Identity = 356/516 (68.99%), Postives = 422/516 (81.78%), Query Frame = 0


Query: 109 ITMAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCP 168
           +++  E+G+F VQQTIGSVLCCKCG+PMAPNAANMCV CL SEVDITEGLQK + I +CP
Sbjct: 1   MSVMDESGMFNVQQTIGSVLCCKCGVPMAPNAANMCVNCLRSEVDITEGLQKSIQIFYCP 60

Query: 169 DCESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQ 228
           +C  YLQPP+TW+K Q ESKELLTFCIKRLKNLNKVKL +AEFVWTEPHSKRIKVKL VQ
Sbjct: 61  ECTCYLQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNAEFVWTEPHSKRIKVKLTVQ 120

Query: 229 KEVLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLI 288
            EVL+GA+LEQSY  EY V+D+LCESC+R QANPDQWVAS+QLRQHV HRRTFF+LEQLI
Sbjct: 121 AEVLNGAVLEQSYPVEYTVRDNLCESCSRFQANPDQWVASIQLRQHVSHRRTFFYLEQLI 180

Query: 289 LKHGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVH 348
           L+H AA+ AIRI+Q+D+GIDFFF N+SHA  FVEF+ KV PI  R D+QLVSHD KS+++
Sbjct: 181 LRHDAASRAIRIQQVDQGIDFFFGNKSHANSFVEFLRKVVPIEYRQDQQLVSHDVKSSLY 240

Query: 349 NYKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDA 408
           NYK+T+SV+I P+CREDL+CLP KVA  LGNLGPLV+CTKV++ I LLDP TLR  FLDA
Sbjct: 241 NYKYTYSVKICPVCREDLVCLPSKVASGLGNLGPLVVCTKVSDNITLLDPRTLRCAFLDA 300

Query: 409 DQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFS 468
            QYWR+ FRS LTSRQLV+Y V D+E    E  V G KY L+Y Q+AR SD G+   +F 
Sbjct: 301 RQYWRSGFRSALTSRQLVKYFVFDVEPPVGEATVGGQKYALSYVQIARESDIGK---MFY 360

Query: 469 IRTHLGHILNPGDYALGYDLYAANSNDMEIEKYK---GLELPEAILIKKSYEEKRQRKRG 528
           ++THLGHIL PGD ALGYD+Y AN ND E+EKY+      LPEAILIKK YEE+R+RK+ 
Sbjct: 361 VQTHLGHILKPGDQALGYDIYGANVNDNEMEKYRLSVKNGLPEAILIKKCYEEQRERKQK 420

Query: 529 KPRAWKLKSLEMDVDD-RGRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSE- 588
           K R WKLKSL M++DD RGR + +K + EYE+FLRDLEENP+LRFNISLYR+++YQ SE 
Sbjct: 421 KSRNWKLKSLPMEMDDSRGRVDPEKTDKEYEEFLRDLEENPELRFNISLYRDKDYQASET 480

Query: 589 --MTDGEDGPSVPLEELLADLDL--DEGDGDGDDGM 616
             MTDGE  PSVP+EELLADLDL  +E D D +D M
Sbjct: 481 ASMTDGEGAPSVPIEELLADLDLSFEEEDDDDEDDM 513

[Close]

BLAST of CmaCh03G007610 vs. TAIR 10
Match: AT5G65650.1 (Protein of unknown function (DUF1195) )

HSP 1 Score: 205.7 bits (522), Expect = 1.6e-52
Identity = 107/162 (66.05%), Postives = 124/162 (76.54%), Query Frame = 0


Query: 701 MKDDDVLPTTIAS------AGKKDSSVSSIFGKGRYKFWALTAILLLAFWSMFTGTVSLR 760
           MKD D LP + +S       GKK++  S++F KGRYKFWAL AILLLAFWSM TGTV+LR
Sbjct: 1   MKDGDSLPISTSSVAATTVTGKKETGYSALFSKGRYKFWALAAILLLAFWSMLTGTVNLR 60

Query: 761 WSAGNLNGLSDDIDFNLPNDLDVLVSISLSEMEEREKIVKHMWDVYTNNRRIRLPRFWQE 820
           WSAGN+N  +DD+ F +  DLDVL      EMEEREK+VKHMWDVY N RRIRLPRFWQE
Sbjct: 61  WSAGNINHFTDDLVFPIHEDLDVL------EMEEREKVVKHMWDVYNNGRRIRLPRFWQE 120

Query: 821 AFEAAYEDLTSEMPGDREAAISEIARMSMHSIVLDTPSEQST 857
           AFEAAYE+LTS++P   EAAISEIARMS+ SIV+D P   ST
Sbjct: 121 AFEAAYEELTSDVPDVVEAAISEIARMSIRSIVIDPPPLHST 156

[Close]

BLAST of CmaCh03G007610 vs. TAIR 10
Match: AT4G36660.1 (Protein of unknown function (DUF1195) )

HSP 1 Score: 199.1 bits (505), Expect = 1.5e-50
Identity = 105/164 (64.02%), Postives = 123/164 (75.00%), Query Frame = 0


Query: 701 MKDDDVLPTTIASA---------GKKDSSVSSIFGKGRYKFWALTAILLLAFWSMFTGTV 760
           MK+DD LPTT  +           KK+SS S +FG+GRYKFWA  AILLLAFWSMFTGTV
Sbjct: 1   MKEDDALPTTTTTGTATGTAMANSKKESSDSVLFGRGRYKFWAFAAILLLAFWSMFTGTV 60

Query: 761 SLRWSAGNLNGLSDDIDFNLPNDLDVLVSISLSEMEEREKIVKHMWDVYTNNRRIRLPRF 820
           +LR S GNLN LS+D+     ++LDVL      EMEEREK+VKHMWDVYTN+RRI+LPRF
Sbjct: 61  TLRLSTGNLNRLSEDLGIPNYDNLDVL------EMEEREKVVKHMWDVYTNSRRIKLPRF 120

Query: 821 WQEAFEAAYEDLTSEMPGDREAAISEIARMSMHSIVLDTPSEQS 856
           WQEAF AAYE+LTS++PG REAAI EIA+MS  SI LD P  +S
Sbjct: 121 WQEAFVAAYEELTSDVPGVREAAIGEIAKMSARSITLDPPPSRS 158

[Close]

BLAST of CmaCh03G007610 vs. TAIR 10
Match: AT1G19380.1 (Protein of unknown function (DUF1195) )

HSP 1 Score: 104.8 bits (260), Expect = 4.0e-22
Identity = 57/114 (50.00%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 730 YKFWALTAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNLPNDLDVLVSISLSEMEER 789
           YK W L A+LLLAF SM TG+VSL+   G  +       F+  +DLDVL      E+EER
Sbjct: 25  YKLWVLIAVLLLAFGSMLTGSVSLK-GIGLFHSADGVNAFSFGDDLDVL------EIEER 84

Query: 790 EKIVKHMWDVYTNNRRIRLPRFWQEAFEAAYEDLTSEMPGDREAAISEIARMSM 844
           EK+V+ MWDVY  +  +++PRFW+EAFEAAYE L S+    R AA+S+IA++S+
Sbjct: 85  EKVVRQMWDVYGRSGGVKVPRFWREAFEAAYEFLISDSAAVRNAAVSDIAKLSL 131

The following BLAST results are available for this feature:

BLAST of CmaCh03G007610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6P2Z6	5.2e-128	47.18	60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=...	[more]
Q6GNS3	8.9e-128	46.77	60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1	[more]
Q5BLF0	6.0e-124	45.82	60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1	[more]
Q08DS5	1.5e-122	45.11	60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1	[more]
Q55BF2	1.9e-122	48.47	60S ribosomal export protein NMD3 OS=Dictyostelium discoideum OX=44689 GN=nmd3 P...	[more]

BLAST of CmaCh03G007610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IT79	1.7e-291	99.80	60S ribosomal export protein NMD3 OS=Cucurbita maxima OX=3661 GN=LOC111478443 PE...	[more]
A0A6J1GFH4	1.5e-290	99.41	60S ribosomal export protein NMD3 OS=Cucurbita moschata OX=3662 GN=LOC111453698 ...	[more]
A0A5D3CM67	3.1e-272	92.11	60S ribosomal export protein NMD3 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B197	3.1e-272	92.11	60S ribosomal export protein NMD3 OS=Cucumis melo OX=3656 GN=LOC103485035 PE=3 S...	[more]
A0A5A7SYS9	8.9e-272	91.91	60S ribosomal export protein NMD3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of CmaCh03G007610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978473.1	3.6e-291	99.80	60S ribosomal export protein NMD3-like [Cucurbita maxima] >XP_022978474.1 60S ri...	[more]
XP_022950672.1	3.0e-290	99.41	60S ribosomal export protein NMD3-like [Cucurbita moschata]	[more]
KAG7034157.1	6.7e-290	99.21	60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023544705.1	9.7e-289	99.02	60S ribosomal export protein NMD3-like [Cucurbita pepo subsp. pepo]	[more]
XP_038883907.1	1.7e-280	86.98	60S ribosomal export protein NMD3 isoform X1 [Benincasa hispida]	[more]

BLAST of CmaCh03G007610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03820.1	1.1e-202	68.99	nonsense-mediated mRNA decay NMD3 family protein	[more]
AT5G65650.1	1.6e-52	66.05	Protein of unknown function (DUF1195)	[more]
AT4G36660.1	1.5e-50	64.02	Protein of unknown function (DUF1195)	[more]
AT1G19380.1	4.0e-22	50.00	Protein of unknown function (DUF1195)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 544..564
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR12746:SF4	60S RIBOSOMAL EXPORT PROTEIN NMD3	coord: 111..610
IPR010608	Protein of unknown function DUF1195	PFAM	PF06708	DUF1195	coord: 711..851 e-value: 2.7E-66 score: 221.8
IPR007064	Nmd3, N-terminal	PFAM	PF04981	NMD3	coord: 129..358 e-value: 1.1E-73 score: 247.7
IPR039768	Ribosomal export protein Nmd3	PANTHER	PTHR12746	NONSENSE-MEDIATED MRNA DECAY PROTEIN 3	coord: 111..610

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G007610.1	CmaCh03G007610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0000055	ribosomal large subunit export from nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043023	ribosomal large subunit binding