CmaCh03G007600 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G007600
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	plant-specific TFIIB-related protein 1
Location	Cma_Chr03: 5960446 .. 5963533 (-)
RNA-Seq Expression	CmaCh03G007600
Synteny	CmaCh03G007600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAACTAAATTTTGAATAACCCAATGTGCGAGCGAGTAAAGGAGGAAACTATGGTTTAACCTAACAACCACAACAACAAAAAAGTATAAATGGTAGGCGATGCAGTTGACTTGAATTCCATCGACCTGCAAAATCGGATTGAGATTACCCGACCACTGAATAACATATGCGCGCTGAATCTGTATCCGTAGCAGTACTGTAACGTCGACAATGAAGTGCCCCTACTGTTCGGCGGCGCAGGGGCGGTGCGCCACCTCGAGCACTGGCAAGTCCATCACCGAGTGCGTTTCATGCGGCCGCGTTGTTGAAGAGCGACAATTCCAGCCTCATCACCTCTTCCACCTTCGCGCTCAAGATAACCCCCTTTGTCTCGTCACCTCCGACCTACCCTCCCCTCCGGTCCACCACCAGAACGATCAGGTTTTGGATCCTTTCGAGCCCACAGGCTTCATTACAGCCTTCTCCACATGGTCCTTGGAGCACAATCCACTCTTCTTCCGCTCCTGCTTCTCCTTCTCCGGTCACCTTGCGGAGCTCGAGCGCACCCTAGAGTCTACGTCGTCAGCCAATTTACCGTCGTCGTCGACGGTCGTGGTCGATAACCTTAGGGCTTATATGCAGATTATCGATGTGGCTTCTCTTTTGGGGTTGGATTACTATATTTCCGAGCATGCGTTTAAGTTGTTTAGAGATTGCTGTTCGGCTACTTGTTTAAGGAACCGGAGCGTTGAGGCGCTTGCCACTGCTGCACTTGTGCAGGCAATTAGGGAGGCGCAGGAGCCCCGAACCCTTCAGGTCTTTATTTCACTTTAAATATGTTGCTTGATTCTTGGTTTTGTTATGATATGTTTTGATGTTCTCGCATAAAGTTCAGGAAGATTTTGGGAAATTCACTGTTGTGCAGATGAATTGAGAAATCTATGCAGCTATTGTCCATTGATGTTGTTTTTTGATAGTTGGCGAGGCTATGGCTTTCAAGTTCATCTTTCGACCATACATCTTTCTGAGTTTCTTTACAAAAGTGCTAACTACCCGCAAGATTTGTTCGAATTTCATGAATTACCCTTGCTTGTTCTACATATTCAGTCAATTGTTATCCTTCCTCTGATTTCTTGCAAAATTATTATTTTGGAGTGTTTAAGTTTCTCAGGTTAGAATGTAAAATTTTAATCCTCGTATATGTTGCTATCTGTACAAGCCCCTTTCTGCACTTTTTAAATTTGAGTAGTGTCTTCTACCAATTGTGATTTTGAGCTATGTTTTGGCATCTTTACTTCACTACTGATACGACAACTAAAGTGGTGTATACTGTGAGTATAACAGGAAATCTCCATTGCAGCCAATGTACCCCAAAAAGAGATAGGGAAGTACATCAAGATTTTGGGAGAAGCTTTGCAATTAAGTCAACCCATCAACAGCAATTCCATTTCAGTCCATATGCCTAGGTTCTGCACGCTTCTTCAACTCAATAAATCTGCTCAGGTACCTCAATTTCATATCTTAGACCAAGTTAAGGCCTATTGATTGGTATGCATTGGACTGTAAATAGTTGATTCTGTTCAATATGATCAAAACTTCTACGGCATGAGAAAATGGACAAGTGCTGTATCCTTACTGGGGGCAAAAAATGACAGAGAAATTTCTTTGCAAATAACTCTTGAAAGCTAATTTGATTGGACTTTCAAATCTCTACATAAAAAGGCATTATGGAGTTTATGTAACTTTTATGTTCTACCAGTGGTACATGGTTCATGAGGAATTGTAGAATCCTTACGGATAAATTTAGAGGGCTAGACGAAGTTCGGGAGAAGTACATGAGGAAAAATATGACACGCCCCCACCTAACAAAACGAACGGAAGTTCTGAAGTAGCCCTACGCAAAATTTTCAAATCTTTCACAATTGTGCTTTGTGTCTATTCATCCTTTCAAAGATTTGGGATCTCTTTTTCAACCACAACTTCCAAAAGATAGCTTTCACCACGCTGTTCCAAAGCATTTTGCTTCTAAGGTTTTAATAATTACAATGTGCTTTTGATAAGTGTCAATTAGAGCACTTCTCTGCTGTCTTCTTTGGCTTAGAGTGGCTTAATGTCTTATCTCCCCTTTGTTTTCATATACTTTCCAAGAGTGATAATAGTTGTTTCTTGTTTAATAATTTAAATTCCAATAATGTTATTCTCTTTCTATGTGATCTATAGATTCACCTTTTCTTATTTAAACTTTTCAAATAGACACAAACCTTAAAGGGACTAAAGTTGCAATTTAACCTTAATTTTATTTGATTTGAATGTAATATGTCAAAACAGATAAATTTCAAATTTGTACAATAAAATTTGTGTTCATGTGTTTCAAATTCTGCTTGACCACTGGCATTGGTAGTTCTCCTCAACAATAATATTGGATATAGTAATGATCGTTTACCTTTCCCTCCTTACAACTCCAAGCATGTGGTAACATGTGATCTATTATTTTCCCTCTAACATGCTTATTGACAACTATGAATTTTAGGAACTGGCTACTCACATCGGGGAAGTTGTCATCAACAAATGCTTCTGCACTCGCAGGAATCCCATTAGCATCTCGGCTGCTGCTATATATTTAGCTTGCCAATTAGAAGACAAACGGAAGACACAAGCAGAAATTTGTAAGGTTACAGGTCTTACTGAAGTCACCCTCCGGAAAGTCTACAAAGAGCTACTAGAAAATTGGGATGATTTGCTTCCGTCTAATTATACTCCTGCTGTCCCTCCAGAAAGGGCATTTCCCACAACTGTAATTGCTTCTGGCCGTTCTGCTGCTCCAAAAGTTGATGCATTTGAACGGACGTCTTCAGAGAAAGACAAGCAGATAGACACTAAACCTAATATATCCACCGAGATCTCAGACATGGGTCATCCATCCAGAGTCAAAGAAGACAATGAGAGTAAATTTGTATCCCGTGGAATGTATAACCCTGTAACTAACAAGTCATCAACTTTTTGTCAGCCACATCCTCCTCCTAAAGGCACTGTTGGAAAGAAGAGTCAAAGTGATATCCAGGGAATGGATATTGTTAAGGAGCACCCGCACTCCACCAGCCAGCAATAA

mRNA sequence

TTAACTAAATTTTGAATAACCCAATGTGCGAGCGAGTAAAGGAGGAAACTATGGTTTAACCTAACAACCACAACAACAAAAAAGTATAAATGGTAGGCGATGCAGTTGACTTGAATTCCATCGACCTGCAAAATCGGATTGAGATTACCCGACCACTGAATAACATATGCGCGCTGAATCTGTATCCGTAGCAGTACTGTAACGTCGACAATGAAGTGCCCCTACTGTTCGGCGGCGCAGGGGCGGTGCGCCACCTCGAGCACTGGCAAGTCCATCACCGAGTGCGTTTCATGCGGCCGCGTTGTTGAAGAGCGACAATTCCAGCCTCATCACCTCTTCCACCTTCGCGCTCAAGATAACCCCCTTTGTCTCGTCACCTCCGACCTACCCTCCCCTCCGGTCCACCACCAGAACGATCAGGTTTTGGATCCTTTCGAGCCCACAGGCTTCATTACAGCCTTCTCCACATGGTCCTTGGAGCACAATCCACTCTTCTTCCGCTCCTGCTTCTCCTTCTCCGGTCACCTTGCGGAGCTCGAGCGCACCCTAGAGTCTACGTCGTCAGCCAATTTACCGTCGTCGTCGACGGTCGTGGTCGATAACCTTAGGGCTTATATGCAGATTATCGATGTGGCTTCTCTTTTGGGGTTGGATTACTATATTTCCGAGCATGCGTTTAAGTTGTTTAGAGATTGCTGTTCGGCTACTTGTTTAAGGAACCGGAGCGTTGAGGCGCTTGCCACTGCTGCACTTGTGCAGGCAATTAGGGAGGCGCAGGAGCCCCGAACCCTTCAGGAAATCTCCATTGCAGCCAATGTACCCCAAAAAGAGATAGGGAAGTACATCAAGATTTTGGGAGAAGCTTTGCAATTAAGTCAACCCATCAACAGCAATTCCATTTCAGTCCATATGCCTAGGTTCTGCACGCTTCTTCAACTCAATAAATCTGCTCAGGAACTGGCTACTCACATCGGGGAAGTTGTCATCAACAAATGCTTCTGCACTCGCAGGAATCCCATTAGCATCTCGGCTGCTGCTATATATTTAGCTTGCCAATTAGAAGACAAACGGAAGACACAAGCAGAAATTTGTAAGGTTACAGGTCTTACTGAAGTCACCCTCCGGAAAGTCTACAAAGAGCTACTAGAAAATTGGGATGATTTGCTTCCGTCTAATTATACTCCTGCTGTCCCTCCAGAAAGGGCATTTCCCACAACTGTAATTGCTTCTGGCCGTTCTGCTGCTCCAAAAGTTGATGCATTTGAACGGACGTCTTCAGAGAAAGACAAGCAGATAGACACTAAACCTAATATATCCACCGAGATCTCAGACATGGGTCATCCATCCAGAGTCAAAGAAGACAATGAGAGTAAATTTGTATCCCGTGGAATGTATAACCCTGTAACTAACAAGTCATCAACTTTTTGTCAGCCACATCCTCCTCCTAAAGGCACTGTTGGAAAGAAGAGTCAAAGTGATATCCAGGGAATGGATATTGTTAAGGAGCACCCGCACTCCACCAGCCAGCAATAA

Coding sequence (CDS)

ATGAAGTGCCCCTACTGTTCGGCGGCGCAGGGGCGGTGCGCCACCTCGAGCACTGGCAAGTCCATCACCGAGTGCGTTTCATGCGGCCGCGTTGTTGAAGAGCGACAATTCCAGCCTCATCACCTCTTCCACCTTCGCGCTCAAGATAACCCCCTTTGTCTCGTCACCTCCGACCTACCCTCCCCTCCGGTCCACCACCAGAACGATCAGGTTTTGGATCCTTTCGAGCCCACAGGCTTCATTACAGCCTTCTCCACATGGTCCTTGGAGCACAATCCACTCTTCTTCCGCTCCTGCTTCTCCTTCTCCGGTCACCTTGCGGAGCTCGAGCGCACCCTAGAGTCTACGTCGTCAGCCAATTTACCGTCGTCGTCGACGGTCGTGGTCGATAACCTTAGGGCTTATATGCAGATTATCGATGTGGCTTCTCTTTTGGGGTTGGATTACTATATTTCCGAGCATGCGTTTAAGTTGTTTAGAGATTGCTGTTCGGCTACTTGTTTAAGGAACCGGAGCGTTGAGGCGCTTGCCACTGCTGCACTTGTGCAGGCAATTAGGGAGGCGCAGGAGCCCCGAACCCTTCAGGAAATCTCCATTGCAGCCAATGTACCCCAAAAAGAGATAGGGAAGTACATCAAGATTTTGGGAGAAGCTTTGCAATTAAGTCAACCCATCAACAGCAATTCCATTTCAGTCCATATGCCTAGGTTCTGCACGCTTCTTCAACTCAATAAATCTGCTCAGGAACTGGCTACTCACATCGGGGAAGTTGTCATCAACAAATGCTTCTGCACTCGCAGGAATCCCATTAGCATCTCGGCTGCTGCTATATATTTAGCTTGCCAATTAGAAGACAAACGGAAGACACAAGCAGAAATTTGTAAGGTTACAGGTCTTACTGAAGTCACCCTCCGGAAAGTCTACAAAGAGCTACTAGAAAATTGGGATGATTTGCTTCCGTCTAATTATACTCCTGCTGTCCCTCCAGAAAGGGCATTTCCCACAACTGTAATTGCTTCTGGCCGTTCTGCTGCTCCAAAAGTTGATGCATTTGAACGGACGTCTTCAGAGAAAGACAAGCAGATAGACACTAAACCTAATATATCCACCGAGATCTCAGACATGGGTCATCCATCCAGAGTCAAAGAAGACAATGAGAGTAAATTTGTATCCCGTGGAATGTATAACCCTGTAACTAACAAGTCATCAACTTTTTGTCAGCCACATCCTCCTCCTAAAGGCACTGTTGGAAAGAAGAGTCAAAGTGATATCCAGGGAATGGATATTGTTAAGGAGCACCCGCACTCCACCAGCCAGCAATAA

Protein sequence

MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLPSPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSANLPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDKQIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKSQSDIQGMDIVKEHPHSTSQQ

Homology

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BLAST of CmaCh03G007600 vs. ExPASy Swiss-Prot
Match: O23215 (Plant-specific TFIIB-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PBRP1 PE=2 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 1.7e-166
Identity = 318/414 (76.81%), Postives = 343/414 (82.85%), Query Frame = 0


Query: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYCS+AQGRC T+S+G+SITEC SCGRV+EERQ Q HHLFHLRAQD PLCLVTSDL 
Sbjct: 1   MKCPYCSSAQGRCTTTSSGRSITECSSCGRVMEERQTQNHHLFHLRAQDTPLCLVTSDLQ 60

Query: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120
           +       D+  DPFEPTGFITAFSTWSLE +P+F RS  SFSGHLAELERTLE  SS +
Sbjct: 61  TAAQPSPEDEE-DPFEPTGFITAFSTWSLEPSPIFARSSLSFSGHLAELERTLELASSTS 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
             +SSTVVVDNLRAYMQIIDVAS+LGLD  ISEHAF+LFRDCCSATCLRNRSVEALATA 
Sbjct: 121 NSNSSTVVVDNLRAYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRNRSVEALATAC 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANV QKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICK+TGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPK-VDAFERTSSEKD 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPE+AFPTT I++ RS  P+ VD  E +  EKD
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTISTTRSTTPRAVDPPEPSFVEKD 360

Query: 361 KQIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYN--PVTNKSSTFCQPHPP 412
           K    KP I T       P + KED + KF    ++    V N +    +P  P
Sbjct: 361 KP-SAKP-IETFDHTYQQP-KGKEDKQPKFRQPWLFGTASVMNPAEMISEPAKP 410

[Close]

BLAST of CmaCh03G007600 vs. ExPASy Swiss-Prot
Match: Q54FD6 (Transcription initiation factor IIB OS=Dictyostelium discoideum OX=44689 GN=gtf2b PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.6e-23
Identity = 63/191 (32.98%), Postives = 107/191 (56.02%), Query Frame = 0


Query: 132 LRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAALVQAIREAQEP 191
           L A+ +I  +A  + L   + + A +LFR        + RSV+ +  AAL  A R+    
Sbjct: 122 LAAFKEIGRMADHMNLPQTVQDRANELFRFMDDKKSTKGRSVDGMVAAALYIACRQEHLS 181

Query: 192 RTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELA 251
           RT +EI+   NVP+KEI +  KI+ E       + + S      RFC+ L+L    ++ A
Sbjct: 182 RTFKEIAALTNVPKKEISRCYKIMKETFASVLNLQTISSEDFTSRFCSTLKLPNDVKKGA 241

Query: 252 THIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKEL 311
            H+ ++ ++      ++PIS++AA+IY+  QL  +++TQ +I  V+G++EVT+R  YK+L
Sbjct: 242 EHVSKMAMDMGIVAGKSPISVTAASIYMVSQLSPEKRTQKQIADVSGVSEVTIRNAYKDL 301

Query: 312 LENWDDLLPSN 323
               D L+PS+
Sbjct: 302 YAKRDQLIPSD 312

[Close]

BLAST of CmaCh03G007600 vs. ExPASy Swiss-Prot
Match: B8GJQ9 (Transcription initiation factor IIB OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) OX=521011 GN=tfb PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.8e-23
Identity = 68/183 (37.16%), Postives = 100/183 (54.64%), Query Frame = 0


Query: 134 AYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRT 193
           A  ++  +AS LGL   + E A  ++RD      +R RS+E +A AAL  A R+   PRT
Sbjct: 149 ALSELDRMASALGLPRNVRETAAVVYRDAVDKNLIRGRSIEGVAAAALYAACRQCSVPRT 208

Query: 194 LQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATH 253
           L EI+  + V +KEIG+  + +   L L   +   S   ++PRFC+ L L    Q  A  
Sbjct: 209 LDEIAEVSRVSRKEIGRTYRFISRELGLK--LLPTSPIDYVPRFCSGLTLKGEVQSRAVE 268

Query: 254 IGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLE 313
           I      +   + R P  ++AAAIY++  L  +R+TQ E+ +V G+TEVT+R  YKEL E
Sbjct: 269 ILRQAAERELTSGRGPTGVAAAAIYISSILGGERRTQREVAEVAGVTEVTIRNRYKELAE 328

Query: 314 NWD 317
             D
Sbjct: 329 KLD 329

[Close]

BLAST of CmaCh03G007600 vs. ExPASy Swiss-Prot
Match: A3CSQ6 (Transcription initiation factor IIB OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) OX=368407 GN=tfb PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 8.1e-23
Identity = 68/183 (37.16%), Postives = 100/183 (54.64%), Query Frame = 0


Query: 134 AYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRT 193
           A  ++  +AS LGL   + E A  ++RD      +R RS+E +A AAL  A R+   PRT
Sbjct: 152 ALSELDRMASALGLPRNVRETAAVVYRDAVDKNLIRGRSIEGVAAAALYAACRQCSVPRT 211

Query: 194 LQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATH 253
           L EI+  + V +KEIG+  + +   L L   +   S   ++PRFC+ L L    Q  A  
Sbjct: 212 LDEIAEVSRVSRKEIGRTYRFISRELGLK--LLPTSPIDYVPRFCSGLNLKGEVQSRAVE 271

Query: 254 IGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLE 313
           I      +   + R P  ++AAAIY++  L  +R+TQ E+ +V G+TEVT+R  YKEL E
Sbjct: 272 ILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQREVAEVAGVTEVTIRNRYKELAE 331

Query: 314 NWD 317
             D
Sbjct: 332 KLD 332

[Close]

BLAST of CmaCh03G007600 vs. ExPASy Swiss-Prot
Match: A7IAR4 (Transcription initiation factor IIB OS=Methanoregula boonei (strain DSM 21154 / JCM 14090 / 6A8) OX=456442 GN=tfb PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-22
Identity = 68/183 (37.16%), Postives = 100/183 (54.64%), Query Frame = 0


Query: 134 AYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRT 193
           A  ++  +AS LGL   + E A  ++RD      +R RS+E +A AAL  A R+   PRT
Sbjct: 149 ALSELDRMASALGLPRNVRETAAVVYRDAVDKNLIRGRSIEGVAAAALYAACRQCSVPRT 208

Query: 194 LQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATH 253
           L EI+  + V +KEIG+  + +   L L   +   S   ++PRFC+ L L    Q  A  
Sbjct: 209 LDEIAEVSRVSRKEIGRTYRFISRELGLK--LLPTSPIDYVPRFCSGLTLKGEVQSRAVE 268

Query: 254 IGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLE 313
           I      +   + R P  ++AAAIY++  L  +R+TQ E+ +V G+TEVT+R  YKEL E
Sbjct: 269 ILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQREVAEVAGVTEVTIRNRYKELAE 328

Query: 314 NWD 317
             D
Sbjct: 329 KLD 329

[Close]

BLAST of CmaCh03G007600 vs. ExPASy TrEMBL
Match: A0A6J1IQA1 (plant-specific TFIIB-related protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111478459 PE=4 SV=1)

HSP 1 Score: 876.3 bits (2263), Expect = 5.3e-251
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0


Query: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120
           SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN
Sbjct: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360

Query: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS 420
           QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS
Sbjct: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS 420

Query: 421 QSDIQGMDIVKEHPHSTSQQ 441
           QSDIQGMDIVKEHPHSTSQQ
Sbjct: 421 QSDIQGMDIVKEHPHSTSQQ 440

[Close]

BLAST of CmaCh03G007600 vs. ExPASy TrEMBL
Match: A0A6J1GE41 (plant-specific TFIIB-related protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111453324 PE=4 SV=1)

HSP 1 Score: 874.0 bits (2257), Expect = 2.6e-250
Identity = 439/440 (99.77%), Postives = 439/440 (99.77%), Query Frame = 0


Query: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120
           SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN
Sbjct: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360

Query: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS 420
           QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPV NKSSTFCQPHPPPKGTVGKKS
Sbjct: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVINKSSTFCQPHPPPKGTVGKKS 420

Query: 421 QSDIQGMDIVKEHPHSTSQQ 441
           QSDIQGMDIVKEHPHSTSQQ
Sbjct: 421 QSDIQGMDIVKEHPHSTSQQ 440

[Close]

BLAST of CmaCh03G007600 vs. ExPASy TrEMBL
Match: A0A0A0KM51 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502590 PE=4 SV=1)

HSP 1 Score: 813.9 bits (2101), Expect = 3.2e-232
Identity = 416/445 (93.48%), Postives = 425/445 (95.51%), Query Frame = 0


Query: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYCSAAQGRC TSSTGKSITEC+SCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCVTSSTGKSITECISCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120
           +PPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSS+N
Sbjct: 61  TPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSSN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPK+DAFE  S EKDK
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKIDAFEGASLEKDK 360

Query: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPP----KGTV 420
            I+TKPNISTEIS+M HPSRVKED+ESKFVS GMYNPVTNKSSTF QPHPP      G V
Sbjct: 361 PIETKPNISTEISEMSHPSRVKEDSESKFVSHGMYNPVTNKSSTFSQPHPPKGNSVAGFV 420

Query: 421 GKKSQ-SDIQGMDIVKEHPHSTSQQ 441
           GKKSQ +D QGMDIVK+  HS SQQ
Sbjct: 421 GKKSQTADTQGMDIVKD--HSNSQQ 443

[Close]

BLAST of CmaCh03G007600 vs. ExPASy TrEMBL
Match: A0A5D3CMR8 (Plant-specific TFIIB-related protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002190 PE=4 SV=1)

HSP 1 Score: 812.4 bits (2097), Expect = 9.4e-232
Identity = 413/445 (92.81%), Postives = 424/445 (95.28%), Query Frame = 0


Query: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYCSAAQGRC TSSTGKSITEC+SCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCVTSSTGKSITECISCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120
           +PPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSS+N
Sbjct: 61  TPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSSN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPK+DAFE  S EKDK
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKIDAFEGASLEKDK 360

Query: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGT----V 420
            I+TKPNI TEI++M HPSRVKED+ESKFVSRGMYNPVTNKSSTF QPHPP   +    V
Sbjct: 361 PIETKPNICTEITEMSHPSRVKEDSESKFVSRGMYNPVTNKSSTFSQPHPPKGNSVASFV 420

Query: 421 GKKSQ-SDIQGMDIVKEHPHSTSQQ 441
           GKKSQ +D QGMDIVKEH +S   Q
Sbjct: 421 GKKSQTADAQGMDIVKEHSNSQHLQ 445

[Close]

BLAST of CmaCh03G007600 vs. ExPASy TrEMBL
Match: A0A1S3B2G9 (uncharacterized protein LOC103485039 OS=Cucumis melo OX=3656 GN=LOC103485039 PE=4 SV=1)

HSP 1 Score: 812.4 bits (2097), Expect = 9.4e-232
Identity = 415/445 (93.26%), Postives = 425/445 (95.51%), Query Frame = 0


Query: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYCSAAQGRC TSSTGKSITEC+SCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCVTSSTGKSITECISCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120
           +PPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSS+N
Sbjct: 61  TPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSSN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPK+DAFE  S EKDK
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKIDAFEGASLEKDK 360

Query: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGT----V 420
            I+TKPNI TEI++M HPSRVKED+ESKFVSRGMYNPVTNKSSTF QPHPP   +    V
Sbjct: 361 PIETKPNICTEITEMSHPSRVKEDSESKFVSRGMYNPVTNKSSTFSQPHPPKGNSVASFV 420

Query: 421 GKKSQ-SDIQGMDIVKEHPHSTSQQ 441
           GKKSQ +D QGMDIVKE  HS SQQ
Sbjct: 421 GKKSQTADAQGMDIVKE--HSNSQQ 443

[Close]

BLAST of CmaCh03G007600 vs. NCBI nr
Match: XP_022978500.1 (plant-specific TFIIB-related protein 1 [Cucurbita maxima])

HSP 1 Score: 876.3 bits (2263), Expect = 1.1e-250
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0


Query: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120
           SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN
Sbjct: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360

Query: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS 420
           QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS
Sbjct: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS 420

Query: 421 QSDIQGMDIVKEHPHSTSQQ 441
           QSDIQGMDIVKEHPHSTSQQ
Sbjct: 421 QSDIQGMDIVKEHPHSTSQQ 440

[Close]

BLAST of CmaCh03G007600 vs. NCBI nr
Match: XP_023544301.1 (plant-specific TFIIB-related protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 874.8 bits (2259), Expect = 3.2e-250
Identity = 439/440 (99.77%), Postives = 439/440 (99.77%), Query Frame = 0


Query: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120
           SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN
Sbjct: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360

Query: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS 420
           QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS
Sbjct: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS 420

Query: 421 QSDIQGMDIVKEHPHSTSQQ 441
           QSDIQGMDIVKEHPHST QQ
Sbjct: 421 QSDIQGMDIVKEHPHSTGQQ 440

[Close]

BLAST of CmaCh03G007600 vs. NCBI nr
Match: KAG7034155.1 (Plant-specific TFIIB-related protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 874.4 bits (2258), Expect = 4.1e-250
Identity = 439/440 (99.77%), Postives = 439/440 (99.77%), Query Frame = 0


Query: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120
           SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN
Sbjct: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360

Query: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS 420
           QIDTKPN STEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS
Sbjct: 361 QIDTKPNTSTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS 420

Query: 421 QSDIQGMDIVKEHPHSTSQQ 441
           QSDIQGMDIVKEHPHSTSQQ
Sbjct: 421 QSDIQGMDIVKEHPHSTSQQ 440

[Close]

BLAST of CmaCh03G007600 vs. NCBI nr
Match: XP_022950148.1 (plant-specific TFIIB-related protein 1 [Cucurbita moschata])

HSP 1 Score: 874.0 bits (2257), Expect = 5.4e-250
Identity = 439/440 (99.77%), Postives = 439/440 (99.77%), Query Frame = 0


Query: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120
           SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN
Sbjct: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360

Query: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS 420
           QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPV NKSSTFCQPHPPPKGTVGKKS
Sbjct: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVINKSSTFCQPHPPPKGTVGKKS 420

Query: 421 QSDIQGMDIVKEHPHSTSQQ 441
           QSDIQGMDIVKEHPHSTSQQ
Sbjct: 421 QSDIQGMDIVKEHPHSTSQQ 440

[Close]

BLAST of CmaCh03G007600 vs. NCBI nr
Match: KAG6603984.1 (Plant-specific TFIIB-related protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 870.9 bits (2249), Expect = 4.6e-249
Identity = 438/440 (99.55%), Postives = 438/440 (99.55%), Query Frame = 0


Query: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120
           SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN
Sbjct: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK 360

Query: 361 QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPPPKGTVGKKS 420
           QIDTKPN STEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHP PKGTVGKKS
Sbjct: 361 QIDTKPNTSTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSSTFCQPHPHPKGTVGKKS 420

Query: 421 QSDIQGMDIVKEHPHSTSQQ 441
           QSDIQGMDIVKEHPHSTSQQ
Sbjct: 421 QSDIQGMDIVKEHPHSTSQQ 440

[Close]

BLAST of CmaCh03G007600 vs. TAIR 10
Match: AT4G36650.1 (plant-specific TFIIB-related protein )

HSP 1 Score: 587.0 bits (1512), Expect = 1.2e-167
Identity = 318/414 (76.81%), Postives = 343/414 (82.85%), Query Frame = 0


Query: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYCS+AQGRC T+S+G+SITEC SCGRV+EERQ Q HHLFHLRAQD PLCLVTSDL 
Sbjct: 1   MKCPYCSSAQGRCTTTSSGRSITECSSCGRVMEERQTQNHHLFHLRAQDTPLCLVTSDLQ 60

Query: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120
           +       D+  DPFEPTGFITAFSTWSLE +P+F RS  SFSGHLAELERTLE  SS +
Sbjct: 61  TAAQPSPEDEE-DPFEPTGFITAFSTWSLEPSPIFARSSLSFSGHLAELERTLELASSTS 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
             +SSTVVVDNLRAYMQIIDVAS+LGLD  ISEHAF+LFRDCCSATCLRNRSVEALATA 
Sbjct: 121 NSNSSTVVVDNLRAYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRNRSVEALATAC 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANV QKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICK+TGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPK-VDAFERTSSEKD 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPE+AFPTT I++ RS  P+ VD  E +  EKD
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTISTTRSTTPRAVDPPEPSFVEKD 360

Query: 361 KQIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYN--PVTNKSSTFCQPHPP 412
           K    KP I T       P + KED + KF    ++    V N +    +P  P
Sbjct: 361 KP-SAKP-IETFDHTYQQP-KGKEDKQPKFRQPWLFGTASVMNPAEMISEPAKP 410

[Close]

BLAST of CmaCh03G007600 vs. TAIR 10
Match: AT4G36650.2 (plant-specific TFIIB-related protein )

HSP 1 Score: 504.6 bits (1298), Expect = 8.0e-143
Identity = 270/359 (75.21%), Postives = 294/359 (81.89%), Query Frame = 0


Query: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYCS+AQGRC T+S+G+SITEC SCGRV+EERQ Q HHLFHLRAQD PLCLVTSDL 
Sbjct: 1   MKCPYCSSAQGRCTTTSSGRSITECSSCGRVMEERQTQNHHLFHLRAQDTPLCLVTSDLQ 60

Query: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120
           +       D+  DPFEPTGFITAFSTWSLE +P+F RS  SFSGHLAELERTLE  SS +
Sbjct: 61  TAAQPSPEDEE-DPFEPTGFITAFSTWSLEPSPIFARSSLSFSGHLAELERTLELASSTS 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
             +SSTVVVDNLRAYMQIIDVAS+LGLD  ISEHAF+LFRDCCSATCLRNRSVEALATA 
Sbjct: 121 NSNSSTVVVDNLRAYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRNRSVEALATAC 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANV QKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICK+TGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLT 300

Query: 301 EVTLRKVY---------KELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDA 351
           E   RK +         ++LLE W  L   ++    P       ++I +    A K+ +
Sbjct: 301 E---RKHFPQPQSPQPAQQLLEPWIHLNLVSWKKTSPLRNQSKLSIIPTNNRKAKKISS 355

[Close]

BLAST of CmaCh03G007600 vs. TAIR 10
Match: AT2G41630.1 (transcription factor IIB )

HSP 1 Score: 90.9 bits (224), Expect = 2.8e-18
Identity = 68/199 (34.17%), Postives = 107/199 (53.77%), Query Frame = 0


Query: 132 LRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAALVQAIREAQEP 191
           ++A+  I  ++  LGL   I + A +L++        R R+ +AL  A L  A R+  +P
Sbjct: 106 IQAFKTIATMSERLGLVATIKDRANELYKRLEDQKSSRGRNQDALYAACLYIACRQEDKP 165

Query: 192 RTLQEISIAAN-VPQKEIGK----YIKILGEALQLSQPINSNSISV--HMPRFCTLLQLN 251
           RT++EI + AN   +KEIG+     +K LG  L+  Q ++  +I     M RFC+ L ++
Sbjct: 166 RTIKEICVIANGATKKEIGRAKDYIVKTLG--LEPGQSVDLGTIHAGDFMRRFCSNLAMS 225

Query: 252 KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTL 311
             A + A     V  ++ F  RR+PISI+A  IY+  QL D +KT  +I   TG+ E T+
Sbjct: 226 NHAVKAAQE--AVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDISHATGVAEGTI 285

Query: 312 RKVYKELLENWDDLLPSNY 324
           R  YK+L  +   + PS Y
Sbjct: 286 RNSYKDLYPHLSKIAPSWY 300

[Close]

BLAST of CmaCh03G007600 vs. TAIR 10
Match: AT3G10330.1 (Cyclin-like family protein )

HSP 1 Score: 87.0 bits (214), Expect = 4.0e-17
Identity = 70/201 (34.83%), Postives = 107/201 (53.23%), Query Frame = 0


Query: 134 AYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRT 193
           A+  I  +A  LGL   I + A ++++        R R+ +AL  A L  A R+  +PRT
Sbjct: 108 AFKTIATMADRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT 167

Query: 194 LQEI-SIAANVPQKEIGK----YIKILGEALQLSQPINSNSISV--HMPRFCTLL----Q 253
           ++EI S+A    +KEIG+     +K LG  L+  Q +   +I     M RFC+ L    Q
Sbjct: 168 VKEICSVANGATKKEIGRAKEYIVKQLG--LETGQLVEMGTIHAGDFMRRFCSNLGMTNQ 227

Query: 254 LNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEV 313
             K+AQE       V  ++ F  RR+PISI+AA IY+  QL D++K   +I   TG+ E 
Sbjct: 228 TVKAAQE------SVQKSEEFDIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEG 287

Query: 314 TLRKVYKELLENWDDLLPSNY 324
           T+R  YK+L  +   ++P+ Y
Sbjct: 288 TIRNSYKDLYPHLSKIIPAWY 300

[Close]

BLAST of CmaCh03G007600 vs. TAIR 10
Match: AT4G10680.1 (transcription factor IIB (TFIIB) family protein )

HSP 1 Score: 53.9 bits (128), Expect = 3.8e-07
Identity = 38/119 (31.93%), Postives = 59/119 (49.58%), Query Frame = 0


Query: 100 FSFSGHLAELERTLESTSSANLPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLF 159
           F  SG  + L   L  T +  + +     V  + AY +I  +   LGL + IS  A K+ 
Sbjct: 61  FKLSGKSSSLASKLRRTQNEMIKNKQEEDVIKI-AYAEIERMTEALGLTFGISNTACKIL 120

Query: 160 RDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEA 219
                      +S+  L  A++ +A R+   P+TL+EIS  ANV  KEI K +K+LG++
Sbjct: 121 SKLDKKNLRGGKSLRGLCAASVSRACRQVNIPKTLKEISAVANVDMKEINKAVKLLGDS 178

The following BLAST results are available for this feature:

BLAST of CmaCh03G007600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23215	1.7e-166	76.81	Plant-specific TFIIB-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PBRP1 ...	[more]
Q54FD6	3.6e-23	32.98	Transcription initiation factor IIB OS=Dictyostelium discoideum OX=44689 GN=gtf2...	[more]
B8GJQ9	4.8e-23	37.16	Transcription initiation factor IIB OS=Methanosphaerula palustris (strain ATCC B...	[more]
A3CSQ6	8.1e-23	37.16	Transcription initiation factor IIB OS=Methanoculleus marisnigri (strain ATCC 35...	[more]
A7IAR4	1.1e-22	37.16	Transcription initiation factor IIB OS=Methanoregula boonei (strain DSM 21154 / ...	[more]

BLAST of CmaCh03G007600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IQA1	5.3e-251	100.00	plant-specific TFIIB-related protein 1 OS=Cucurbita maxima OX=3661 GN=LOC1114784...	[more]
A0A6J1GE41	2.6e-250	99.77	plant-specific TFIIB-related protein 1 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A0A0KM51	3.2e-232	93.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502590 PE=4 SV=1	[more]
A0A5D3CMR8	9.4e-232	92.81	Plant-specific TFIIB-related protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3B2G9	9.4e-232	93.26	uncharacterized protein LOC103485039 OS=Cucumis melo OX=3656 GN=LOC103485039 PE=...	[more]

BLAST of CmaCh03G007600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978500.1	1.1e-250	100.00	plant-specific TFIIB-related protein 1 [Cucurbita maxima]	[more]
XP_023544301.1	3.2e-250	99.77	plant-specific TFIIB-related protein 1 [Cucurbita pepo subsp. pepo]	[more]
KAG7034155.1	4.1e-250	99.77	Plant-specific TFIIB-related protein 1, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_022950148.1	5.4e-250	99.77	plant-specific TFIIB-related protein 1 [Cucurbita moschata]	[more]
KAG6603984.1	4.6e-249	99.55	Plant-specific TFIIB-related protein 1, partial [Cucurbita argyrosperma subsp. s...	[more]

BLAST of CmaCh03G007600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36650.1	1.2e-167	76.81	plant-specific TFIIB-related protein	[more]
AT4G36650.2	8.0e-143	75.21	plant-specific TFIIB-related protein	[more]
AT2G41630.1	2.8e-18	34.17	transcription factor IIB	[more]
AT3G10330.1	4.0e-17	34.83	Cyclin-like family protein	[more]
AT4G10680.1	3.8e-07	31.93	transcription factor IIB (TFIIB) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000812	Transcription factor TFIIB	PRINTS	PR00685	TIFACTORIIB	coord: 299..313 score: 47.56 coord: 233..251 score: 37.54 coord: 204..219 score: 37.08 coord: 18..38 score: 26.35 coord: 178..197 score: 44.33 coord: 267..283 score: 54.51
IPR000812	Transcription factor TFIIB	PANTHER	PTHR11618	TRANSCRIPTION INITIATION FACTOR IIB-RELATED	coord: 1..425
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 232..313 e-value: 1.7E-15 score: 67.5 coord: 136..217 e-value: 2.6E-4 score: 30.3
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 134..215 e-value: 1.39833E-6 score: 44.1517
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 234..312 e-value: 1.67976E-15 score: 69.5748
None	No IPR available	GENE3D	1.10.472.10		coord: 132..223 e-value: 3.6E-26 score: 93.2
None	No IPR available	GENE3D	1.10.472.10		coord: 232..328 e-value: 2.6E-25 score: 90.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..365
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 392..409
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 348..440
None	No IPR available	PANTHER	PTHR11618:SF26	PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1	coord: 1..425
IPR013150	Transcription factor TFIIB, cyclin-like domain	PFAM	PF00382	TFIIB	coord: 140..208 e-value: 1.3E-7 score: 31.5 coord: 234..304 e-value: 3.1E-12 score: 46.4
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 133..223
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 230..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G007600.1	CmaCh03G007600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0070897	transcription preinitiation complex assembly
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009527	plastid outer membrane
cellular_component	GO:0097550	transcription preinitiation complex
molecular_function	GO:0000182	rDNA binding
molecular_function	GO:0017025	TBP-class protein binding