CmaCh03G006960 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTACTAAAAATATATTTGATATATTTATAGTAACTTAAAAATGGGCCTAATCATTTGATTGGGCCTGGGCTTTAATGTTCTAGCGGGCTGCGGGCCATAAGGCCCATGCTGCTCAATTTTCGAGCCCATGAATGCTAAAATGAAGATTCAAGTGCTCGAACAGCTCTGACCGCATGTGTTGCAGACAGCAATGGCGCTTTTGCAGACCACAATTTGCCTTCGCATTTTCACAATCCTCTTCTTCCTCTTCTTTCTCCTGTCTGGGAAATCTTGTTGTATCAGAACCCCGAATCGGATTGCGGACTCTAACAAGATTCCGTCAAGCCATCACTCCTTGAAAACGGCAGTCTTCGCTTTGGGATGTTTCTGGAGATCGGAAGCCGTCTTTGGTTGCTTGGATGGAGTCGTCCGGACCACCGTCGGCTACGCCGGTGGTACTAAACTGAATCCTGAGTATCGTAGCTTGGGTGATCATGCCGAGTCTGTCCGGGTTCGGGTTCTTACCTTCTCTTCTCCTTTACATTTCTTCTTTTTCTGATTTCTTAATCTTCATTTTTTACTTTGTGAATTTTCTGTATTCTACATTTCGGATAATGTTTGTGCCATCATTACTTCGGTAGATCCCGTCTATACGTTTGGTTCTATTGTATATTTACCTTTTCAATCTCGTTTTGCTTCGTTGATCGGATTTGTATTTTGTTTTCTTGAAATTCTCCTTATGCGAAGCAGGAATGAGGTTTAAATTGCCTGACATTTGGTATCATGTCACATTTTGAGGGGAGCTTATATCGAATTTGTTTGTCACAGATCTCTGATGTGCAAATGGATTAAAAAATCCTGTTTTCTTTCTTGTCGACGATTTGTCAATGTTCTTCTTTTCTGGAATAGGAATTGTTCATAACTTCAAAATAAACTGTCTATTTATGCACCTACGACCCACCTTTCAGTCAAGACATTCTTCACTTACATGCATTGAAATTGTTAAAGTGAGGCTGTATGTTCTGTATAATTTTAAAATCAACTGTGACTTCACTTAATCCTAGATAGGTTGACGTGTCTTTTCTATTGTAGTGATGCAATTATTTGGGGGACTTGCCCCCTATGATCGGTGCTTGATCTTTAGTTATCGTTGATGCATCATTTGGAGAGGCCTCGCCCTAGCTTTGTGTTCTATGTAATTTCATACACAATGACGAAAGAATCTTCTTTCAAGATACAAATTTCGAATCATATAGTGATATATGATTATTGAGATTCATAAAAAAAAAAAAATTAATTGTTGGTTTCATTACATTACATGTGTGTTTTAATGGGACTGATTATTTGTCACATGCTTTGTAATTCATTTCAGGTCGAATATGATCCCAAGCTTACTAGTTTCAGGCAACTCTTAGAGGTTTTTTGGTCCAGTCATGATTCTAGGCAAGTGTTTGGACAGGGTCCTGATGTGGGCAACCAGTATAGGTACAGTCTAAATTCTAGCTCATGGTTTAAACAGAATTAACCTTTGATAATGGTATTATTTACTCCCTTGTATCAGATCTATCATTTTTACTAATGGCACCGAAGAATCTAGACTGGCTGCTGTCAGCAAAGAAAAAGAGCAACTGAAGTCGAGAGGAAGCGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAGGCTGAACATCAGGTTGATATCATTGATTAACATGATTATTTGAAGCAATTATCTGGCGAAATTTCATGTTTTAAGATTTCCTGCTTCTTGACATACAACTCACCTAGAAATGTTGCAGTTCAGATAGATTGAGATGTCTTTGGTCTTTTGCTACTTTGGTTAATTGCTACCCATATCCCCATTTTTCCTATTTGATGCTCAAGTAAGCTTAGGATGTCGTGGCCTTTGAAGATGAAGTGCATCATAGCTTCAGAATGAATGGCCCATCTTCTGAGAACTGATTTTTTATTTTTTGAAATTTTGCTCCAGACCTTTGTAGCTAAAAAATGGAATCGTTGACATTACATGTCGAATCTCACTCACACTGTATATTTACTCGCAGAAGTTTGAGCTGAAGAGGAATCCCTTTTTTCTTCAATTAATGGGCAACTTGCCAGAAGAGGAGCTTGAGATGTCCACTTTGGCAGCAAATATGAACGGGTACGCCGCAGACCTCTGTCCTCCGAAGACTCAGAAGCAAATTGATGCCAAGATCAACGACATTATTAAAAAAGGATGGCCCATTCTGAGAGAAAAATAGGTTCATCTTCGTGCAAAGCTCTAGCTTGGATAGCATTGCATCAGTTTGTTTTCTTGTTACGGCTGGTGGATCATTCTTAAGGTTGCTGAAGCCCACCACATTGTTTGGATCATTGATTGAATTTCCTCCCTCAGCTAGCTTCAATTTTATGTATCTACAAATTTCATTCTTTCTTTCAAATCCATTATGTAGATTGAATGAATACCCATTACCAATTGGGATTCTTCCATTCTTTAAAACCTTCGCTTCCCCCATCTCGTGTCAAGGAACTGAGCTGTATTTATATCACATTTTTAAAGTACGTTGATTCAGAAGAGAGCGAATGAGTGATAGCCTTGACTTGTGATTTGACCTTTTCTTTTCTAGTCCATATATTTTAAGTTTTCAAT AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTACTAAAAATATATTTGATATATTTATAGTAACTTAAAAATGGGCCTAATCATTTGATTGGGCCTGGGCTTTAATGTTCTAGCGGGCTGCGGGCCATAAGGCCCATGCTGCTCAATTTTCGAGCCCATGAATGCTAAAATGAAGATTCAAGTGCTCGAACAGCTCTGACCGCATGTGTTGCAGACAGCAATGGCGCTTTTGCAGACCACAATTTGCCTTCGCATTTTCACAATCCTCTTCTTCCTCTTCTTTCTCCTGTCTGGGAAATCTTGTTGTATCAGAACCCCGAATCGGATTGCGGACTCTAACAAGATTCCGTCAAGCCATCACTCCTTGAAAACGGCAGTCTTCGCTTTGGGATGTTTCTGGAGATCGGAAGCCGTCTTTGGTTGCTTGGATGGAGTCGTCCGGACCACCGTCGGCTACGCCGGTGGTACTAAACTGAATCCTGAGTATCGTAGCTTGGGTGATCATGCCGAGTCTGTCCGGGTCGAATATGATCCCAAGCTTACTAGTTTCAGGCAACTCTTAGAGGTTTTTTGGTCCAGTCATGATTCTAGGCAAGTGTTTGGACAGGGTCCTGATGTGGGCAACCAGTATAGATCTATCATTTTTACTAATGGCACCGAAGAATCTAGACTGGCTGCTGTCAGCAAAGAAAAAGAGCAACTGAAGTCGAGAGGAAGCGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAGGCTGAACATCAGAAGTTTGAGCTGAAGAGGAATCCCTTTTTTCTTCAATTAATGGGCAACTTGCCAGAAGAGGAGCTTGAGATGTCCACTTTGGCAGCAAATATGAACGGGTACGCCGCAGACCTCTGTCCTCCGAAGACTCAGAAGCAAATTGATGCCAAGATCAACGACATTATTAAAAAAGGATGGCCCATTCTGAGAGAAAAATAGGTTCATCTTCGTGCAAAGCTCTAGCTTGGATAGCATTGCATCAGTTTGTTTTCTTGTTACGGCTGGTGGATCATTCTTAAGGTTGCTGAAGCCCACCACATTGTTTGGATCATTGATTGAATTTCCTCCCTCAGCTAGCTTCAATTTTATGTATCTACAAATTTCATTCTTTCTTTCAAATCCATTATGTAGATTGAATGAATACCCATTACCAATTGGGATTCTTCCATTCTTTAAAACCTTCGCTTCCCCCATCTCGTGTCAAGGAACTGAGCTGTATTTATATCACATTTTTAAAGTACGTTGATTCAGAAGAGAGCGAATGAGTGATAGCCTTGACTTGTGATTTGACCTTTTCTTTTCTAGTCCATATATTTTAAGTTTTCAAT ATGGCGCTTTTGCAGACCACAATTTGCCTTCGCATTTTCACAATCCTCTTCTTCCTCTTCTTTCTCCTGTCTGGGAAATCTTGTTGTATCAGAACCCCGAATCGGATTGCGGACTCTAACAAGATTCCGTCAAGCCATCACTCCTTGAAAACGGCAGTCTTCGCTTTGGGATGTTTCTGGAGATCGGAAGCCGTCTTTGGTTGCTTGGATGGAGTCGTCCGGACCACCGTCGGCTACGCCGGTGGTACTAAACTGAATCCTGAGTATCGTAGCTTGGGTGATCATGCCGAGTCTGTCCGGGTCGAATATGATCCCAAGCTTACTAGTTTCAGGCAACTCTTAGAGGTTTTTTGGTCCAGTCATGATTCTAGGCAAGTGTTTGGACAGGGTCCTGATGTGGGCAACCAGTATAGATCTATCATTTTTACTAATGGCACCGAAGAATCTAGACTGGCTGCTGTCAGCAAAGAAAAAGAGCAACTGAAGTCGAGAGGAAGCGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAGGCTGAACATCAGAAGTTTGAGCTGAAGAGGAATCCCTTTTTTCTTCAATTAATGGGCAACTTGCCAGAAGAGGAGCTTGAGATGTCCACTTTGGCAGCAAATATGAACGGGTACGCCGCAGACCTCTGTCCTCCGAAGACTCAGAAGCAAATTGATGCCAAGATCAACGACATTATTAAAAAAGGATGGCCCATTCTGAGAGAAAAATAG MALLQTTICLRIFTILFFLFFLLSGKSCCIRTPNRIADSNKIPSSHHSLKTAVFALGCFWRSEAVFGCLDGVVRTTVGYAGGTKLNPEYRSLGDHAESVRVEYDPKLTSFRQLLEVFWSSHDSRQVFGQGPDVGNQYRSIIFTNGTEESRLAAVSKEKEQLKSRGSAVTTQIQELGAFYPAEAEHQKFELKRNPFFLQLMGNLPEEELEMSTLAANMNGYAADLCPPKTQKQIDAKINDIIKKGWPILREK Homology
BLAST of CmaCh03G006960 vs. ExPASy Swiss-Prot
Match: Q9SL43 (Peptide methionine sulfoxide reductase A5 OS=Arabidopsis thaliana OX=3702 GN=MSRA5 PE=2 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 1.8e-91 Identity = 162/241 (67.22%), Postives = 198/241 (82.16%), Query Frame = 0
BLAST of CmaCh03G006960 vs. ExPASy Swiss-Prot
Match: Q5VPG8 (Peptide methionine sulfoxide reductase A5 OS=Oryza sativa subsp. japonica OX=39947 GN=MSRA5 PE=2 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 6.6e-86 Identity = 148/201 (73.63%), Postives = 174/201 (86.57%), Query Frame = 0
BLAST of CmaCh03G006960 vs. ExPASy Swiss-Prot
Match: P08761 (Peptide methionine sulfoxide reductase OS=Drosophila melanogaster OX=7227 GN=MsrA PE=1 SV=2) HSP 1 Score: 143.7 bits (361), Expect = 2.9e-33 Identity = 70/172 (40.70%), Postives = 108/172 (62.79%), Query Frame = 0
BLAST of CmaCh03G006960 vs. ExPASy Swiss-Prot
Match: Q2RRT3 (Peptide methionine sulfoxide reductase MsrA OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=msrA PE=3 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.9e-30 Identity = 68/145 (46.90%), Postives = 91/145 (62.76%), Query Frame = 0
BLAST of CmaCh03G006960 vs. ExPASy Swiss-Prot
Match: Q551H3 (Peptide methionine sulfoxide reductase OS=Dictyostelium discoideum OX=44689 GN=msrA PE=3 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.3e-29 Identity = 67/141 (47.52%), Postives = 87/141 (61.70%), Query Frame = 0
BLAST of CmaCh03G006960 vs. ExPASy TrEMBL
Match: A0A6J1IPP3 (Protein-methionine-S-oxide reductase OS=Cucurbita maxima OX=3661 GN=LOC111478806 PE=3 SV=1) HSP 1 Score: 506.5 bits (1303), Expect = 6.3e-140 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of CmaCh03G006960 vs. ExPASy TrEMBL
Match: A0A6J1GGV0 (Protein-methionine-S-oxide reductase OS=Cucurbita moschata OX=3662 GN=LOC111453785 PE=3 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 2.9e-137 Identity = 247/251 (98.41%), Postives = 249/251 (99.20%), Query Frame = 0
BLAST of CmaCh03G006960 vs. ExPASy TrEMBL
Match: A0A6J1BW06 (Protein-methionine-S-oxide reductase OS=Momordica charantia OX=3673 GN=LOC111005861 PE=3 SV=1) HSP 1 Score: 454.5 bits (1168), Expect = 2.8e-124 Identity = 226/251 (90.04%), Postives = 236/251 (94.02%), Query Frame = 0
BLAST of CmaCh03G006960 vs. ExPASy TrEMBL
Match: A0A0A0KMD5 (Protein-methionine-S-oxide reductase OS=Cucumis sativus OX=3659 GN=Csa_6G505300 PE=3 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 2.4e-123 Identity = 230/252 (91.27%), Postives = 234/252 (92.86%), Query Frame = 0
BLAST of CmaCh03G006960 vs. ExPASy TrEMBL
Match: A0A5D3CMK1 (Protein-methionine-S-oxide reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001440 PE=3 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 5.0e-121 Identity = 227/252 (90.08%), Postives = 230/252 (91.27%), Query Frame = 0
BLAST of CmaCh03G006960 vs. NCBI nr
Match: XP_022979051.1 (peptide methionine sulfoxide reductase A5-like [Cucurbita maxima]) HSP 1 Score: 506.5 bits (1303), Expect = 1.3e-139 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of CmaCh03G006960 vs. NCBI nr
Match: KAG6603921.1 (Peptide methionine sulfoxide reductase A5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 502.7 bits (1293), Expect = 1.9e-138 Identity = 249/251 (99.20%), Postives = 250/251 (99.60%), Query Frame = 0
BLAST of CmaCh03G006960 vs. NCBI nr
Match: XP_022950784.1 (peptide methionine sulfoxide reductase A5 [Cucurbita moschata]) HSP 1 Score: 497.7 bits (1280), Expect = 6.0e-137 Identity = 247/251 (98.41%), Postives = 249/251 (99.20%), Query Frame = 0
BLAST of CmaCh03G006960 vs. NCBI nr
Match: XP_023544873.1 (peptide methionine sulfoxide reductase A5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 497.3 bits (1279), Expect = 7.9e-137 Identity = 246/251 (98.01%), Postives = 248/251 (98.80%), Query Frame = 0
BLAST of CmaCh03G006960 vs. NCBI nr
Match: XP_038881316.1 (peptide methionine sulfoxide reductase A5 [Benincasa hispida]) HSP 1 Score: 458.8 bits (1179), Expect = 3.1e-125 Identity = 233/252 (92.46%), Postives = 238/252 (94.44%), Query Frame = 0
BLAST of CmaCh03G006960 vs. TAIR 10
Match: AT2G18030.1 (Peptide methionine sulfoxide reductase family protein ) HSP 1 Score: 337.0 bits (863), Expect = 1.3e-92 Identity = 162/241 (67.22%), Postives = 198/241 (82.16%), Query Frame = 0
BLAST of CmaCh03G006960 vs. TAIR 10
Match: AT2G18030.2 (Peptide methionine sulfoxide reductase family protein ) HSP 1 Score: 241.9 bits (616), Expect = 5.5e-64 Identity = 121/177 (68.36%), Postives = 142/177 (80.23%), Query Frame = 0
BLAST of CmaCh03G006960 vs. TAIR 10
Match: AT4G25130.1 (peptide met sulfoxide reductase 4 ) HSP 1 Score: 109.8 bits (273), Expect = 3.3e-24 Identity = 64/154 (41.56%), Postives = 83/154 (53.90%), Query Frame = 0
BLAST of CmaCh03G006960 vs. TAIR 10
Match: AT5G61640.1 (peptidemethionine sulfoxide reductase 1 ) HSP 1 Score: 109.8 bits (273), Expect = 3.3e-24 Identity = 61/149 (40.94%), Postives = 84/149 (56.38%), Query Frame = 0
BLAST of CmaCh03G006960 vs. TAIR 10
Match: AT5G07460.1 (peptidemethionine sulfoxide reductase 2 ) HSP 1 Score: 109.4 bits (272), Expect = 4.3e-24 Identity = 65/173 (37.57%), Postives = 91/173 (52.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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