CmaCh03G006000 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G006000
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	Cma_Chr03: 5313606 .. 5315732 (+)
RNA-Seq Expression	CmaCh03G006000
Synteny	CmaCh03G006000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATTTACATCTTCGGTGGGTCACCTAGCAAGTCTCTCGCTCTCGACCTTCCATTCTGCATTCAAATCTTACGTCGAAGGCAAAATTTCTACGCCCCCCTTGTTGGTTTTCCGTCAGCTGCTAAGGTGTCGGGTTAAGCCCAATGATTCTACCTTCTCCTTACTCATTAAAGCCTTCGTTGTATCGTCTTCATCTTCTTCTTTTGCACCATCATCCTGTTCTGAGAATGCAGAAGCGGAGGCGAATCAGCTCCAAACCCATTTCATTAAATGGGGATTTGACCAATTTTTGTATGTTAGTACTGCCTTTCTCGACTTGTATTCAAAATTGGGTTTTGTTAAAGCTGCTCGACGTTTGTTTGATGATATTCCTGAAAAAGATGTTGTATCGTGGAATGCGTTGATATCTGGGTACTCACGAAGTGGATTTAACCATGATACCTTCGAACTGTTTGTCGAAATGCGCAGGAGGGGGTTCAATCCTTGTCAGAGAACGTTGGTAAGTTTAATTCCTTCCTGTGGTACCCAACACTTATTCGTCCAAGGAAAATGCATCCATGCTTTAGGTGTTAAGGCTGGCCTTGATTTGGACTCCCAAGTGAAAAATTCTCTTGCATCGATGTATGGTAAATGTGCAGATTTAGAAGGGGTGGAACTCTTATTTGGAGAAATTATTGAAAAAAACGTAGTTTCTTGGAATACTATGATTGGGGCATTTGGCCAAAATGGGTTCTTTGTGGAGGCAATGCTTGTTTTCAAGCAAATGCTCGAGGAAAGTATCAATACTAGCTCGGTGACGATGGTCAGTATCTTGTCTGCAAATGCAAATCCAAGATCTATCCATTGTTATGCTACCAAAACTGGTCTTATGGAAAATGTTTCCGTGGTTACCTCTCTAATTTGCTCGTACGTAAAATGTGGATGCATACATATAGCAGAACAGATTTATATGTCAAAACTCCAGAAAAACTTGGTTGCATTAACTGCGATTATTTCAGGGTATGCTGAGAAAGGTGACATGGGAGCTGTGGTGAAGCTGTATTCCCGTGTGCAGCATTTAGAAATGAAACTAGATGCAGTTGCCATGGTTGGTATAATCCAAGGTATTACATATCCCGATCACTCTGGTATTGGACTATCTTTCCACGGTTATGGGCTAAAGAGTGGGTTAATTATTGATTGTTTGGTTGCAAATGGTTTCATAAGCATGTACTCAAGGTTCGATGATATTGATGCAGTATTTTCTTTATTTCAAGAGATGCATGAAAAGACACTGAGCAGCTGGAATTCTGTGATATCTAGCTGTGCACAGGCAGGAAGGTCAATTGATGCCATGGCTTTGTTTTCCCAAATGAAGTTGTCAGGCTATGGGCCAGATTCAATTACACTTGCTAGTTTACTATCTGCTTGTTGCCAAAATGGGAACTTGCATTTTGGGGAGATACTTCATTCCTATATTCTAAGAAACAATCTGGACTTGGAAGGTTTTGTTGGAACTGCTCTTATAGACATGTACGTCAAGTGTGGAAGAATGGACTTTGCTGAAAAGGTGTTTAAGAGCATGAAAGAGCCATGTTTAGCTTCATGGAACTCAATGATCTCTGGTTATGGTTTATTTGGGTTTGACAATCATGTTTTCCTCTGTTACACTAAAATGATGGAGAAGGGGATAAAGCCCAATAAAATAACTTTCTCAGGAATTTTAGCTGCTTGCACTCATGGAGGACTTGTTGAAGAAGGTAGAACATACTTCGAAATCATGAAGAAAGAACTTGGTATAGTGCCAGAGTCACAACATTGTGCATCCATGGTTGGCCTGCTTGGACGGGCAGGCTTGTTTGAAGAGGCAATTCTATTTATCAAAAACATGGAAGTCAATCCAGATTCTGCAGTGTGGGGAGCATTTCTCAGTGCTTGTTGCATTCACCAGGAAGTTAAGCTTGGGGAATCTGTGGCGAAAAAGTTGCTTTTCTCTAACTGTAGAAATGGGGGATTTTTTGTGTTGATGTCAAATCTTTATGCAGCATCAGGGAGGTGGAATGATGTAGCAAAAGTCAGAAAGATGATGCGAGAAATGGGAGAAGATGGTTGTTCAGGTGTTAGCCTTATGGAATGGATTTCCTAG

mRNA sequence

ATGCAATTTACATCTTCGGTGGGTCACCTAGCAAGTCTCTCGCTCTCGACCTTCCATTCTGCATTCAAATCTTACGTCGAAGGCAAAATTTCTACGCCCCCCTTGTTGGTTTTCCGTCAGCTGCTAAGGTGTCGGGTTAAGCCCAATGATTCTACCTTCTCCTTACTCATTAAAGCCTTCGTTGTATCGTCTTCATCTTCTTCTTTTGCACCATCATCCTGTTCTGAGAATGCAGAAGCGGAGGCGAATCAGCTCCAAACCCATTTCATTAAATGGGGATTTGACCAATTTTTGTATGTTAGTACTGCCTTTCTCGACTTGTATTCAAAATTGGGTTTTGTTAAAGCTGCTCGACGTTTGTTTGATGATATTCCTGAAAAAGATGTTGTATCGTGGAATGCGTTGATATCTGGGTACTCACGAAGTGGATTTAACCATGATACCTTCGAACTGTTTGTCGAAATGCGCAGGAGGGGGTTCAATCCTTGTCAGAGAACGTTGGTAAGTTTAATTCCTTCCTGTGGTACCCAACACTTATTCGTCCAAGGAAAATGCATCCATGCTTTAGGTGTTAAGGCTGGCCTTGATTTGGACTCCCAAGTGAAAAATTCTCTTGCATCGATGTATGGTAAATGTGCAGATTTAGAAGGGGTGGAACTCTTATTTGGAGAAATTATTGAAAAAAACGTAGTTTCTTGGAATACTATGATTGGGGCATTTGGCCAAAATGGGTTCTTTGTGGAGGCAATGCTTGTTTTCAAGCAAATGCTCGAGGAAAGTATCAATACTAGCTCGGTGACGATGGTCAGTATCTTGTCTGCAAATGCAAATCCAAGATCTATCCATTGTTATGCTACCAAAACTGGTCTTATGGAAAATGTTTCCGTGGTTACCTCTCTAATTTGCTCGTACGTAAAATGTGGATGCATACATATAGCAGAACAGATTTATATGTCAAAACTCCAGAAAAACTTGGTTGCATTAACTGCGATTATTTCAGGGTATGCTGAGAAAGGTGACATGGGAGCTGTGGTGAAGCTGTATTCCCGTGTGCAGCATTTAGAAATGAAACTAGATGCAGTTGCCATGGTTGGTATAATCCAAGGTATTACATATCCCGATCACTCTGGTATTGGACTATCTTTCCACGGTTATGGGCTAAAGAGTGGGTTAATTATTGATTGTTTGGTTGCAAATGGTTTCATAAGCATGTACTCAAGGTTCGATGATATTGATGCAGTATTTTCTTTATTTCAAGAGATGCATGAAAAGACACTGAGCAGCTGGAATTCTGTGATATCTAGCTGTGCACAGGCAGGAAGGTCAATTGATGCCATGGCTTTGTTTTCCCAAATGAAGTTGTCAGGCTATGGGCCAGATTCAATTACACTTGCTAGTTTACTATCTGCTTGTTGCCAAAATGGGAACTTGCATTTTGGGGAGATACTTCATTCCTATATTCTAAGAAACAATCTGGACTTGGAAGGTTTTGTTGGAACTGCTCTTATAGACATGTACGTCAAGTGTGGAAGAATGGACTTTGCTGAAAAGGTGTTTAAGAGCATGAAAGAGCCATGTTTAGCTTCATGGAACTCAATGATCTCTGGTTATGGTTTATTTGGGTTTGACAATCATGTTTTCCTCTGTTACACTAAAATGATGGAGAAGGGGATAAAGCCCAATAAAATAACTTTCTCAGGAATTTTAGCTGCTTGCACTCATGGAGGACTTGTTGAAGAAGGTAGAACATACTTCGAAATCATGAAGAAAGAACTTGGTATAGTGCCAGAGTCACAACATTGTGCATCCATGGTTGGCCTGCTTGGACGGGCAGGCTTGTTTGAAGAGGCAATTCTATTTATCAAAAACATGGAAGTCAATCCAGATTCTGCAGTGTGGGGAGCATTTCTCAGTGCTTGTTGCATTCACCAGGAAGTTAAGCTTGGGGAATCTGTGGCGAAAAAGTTGCTTTTCTCTAACTGTAGAAATGGGGGATTTTTTGTGTTGATGTCAAATCTTTATGCAGCATCAGGGAGGTGGAATGATGTAGCAAAAGTCAGAAAGATGATGCGAGAAATGGGAGAAGATGGTTGTTCAGGTGTTAGCCTTATGGAATGGATTTCCTAG

Coding sequence (CDS)

ATGCAATTTACATCTTCGGTGGGTCACCTAGCAAGTCTCTCGCTCTCGACCTTCCATTCTGCATTCAAATCTTACGTCGAAGGCAAAATTTCTACGCCCCCCTTGTTGGTTTTCCGTCAGCTGCTAAGGTGTCGGGTTAAGCCCAATGATTCTACCTTCTCCTTACTCATTAAAGCCTTCGTTGTATCGTCTTCATCTTCTTCTTTTGCACCATCATCCTGTTCTGAGAATGCAGAAGCGGAGGCGAATCAGCTCCAAACCCATTTCATTAAATGGGGATTTGACCAATTTTTGTATGTTAGTACTGCCTTTCTCGACTTGTATTCAAAATTGGGTTTTGTTAAAGCTGCTCGACGTTTGTTTGATGATATTCCTGAAAAAGATGTTGTATCGTGGAATGCGTTGATATCTGGGTACTCACGAAGTGGATTTAACCATGATACCTTCGAACTGTTTGTCGAAATGCGCAGGAGGGGGTTCAATCCTTGTCAGAGAACGTTGGTAAGTTTAATTCCTTCCTGTGGTACCCAACACTTATTCGTCCAAGGAAAATGCATCCATGCTTTAGGTGTTAAGGCTGGCCTTGATTTGGACTCCCAAGTGAAAAATTCTCTTGCATCGATGTATGGTAAATGTGCAGATTTAGAAGGGGTGGAACTCTTATTTGGAGAAATTATTGAAAAAAACGTAGTTTCTTGGAATACTATGATTGGGGCATTTGGCCAAAATGGGTTCTTTGTGGAGGCAATGCTTGTTTTCAAGCAAATGCTCGAGGAAAGTATCAATACTAGCTCGGTGACGATGGTCAGTATCTTGTCTGCAAATGCAAATCCAAGATCTATCCATTGTTATGCTACCAAAACTGGTCTTATGGAAAATGTTTCCGTGGTTACCTCTCTAATTTGCTCGTACGTAAAATGTGGATGCATACATATAGCAGAACAGATTTATATGTCAAAACTCCAGAAAAACTTGGTTGCATTAACTGCGATTATTTCAGGGTATGCTGAGAAAGGTGACATGGGAGCTGTGGTGAAGCTGTATTCCCGTGTGCAGCATTTAGAAATGAAACTAGATGCAGTTGCCATGGTTGGTATAATCCAAGGTATTACATATCCCGATCACTCTGGTATTGGACTATCTTTCCACGGTTATGGGCTAAAGAGTGGGTTAATTATTGATTGTTTGGTTGCAAATGGTTTCATAAGCATGTACTCAAGGTTCGATGATATTGATGCAGTATTTTCTTTATTTCAAGAGATGCATGAAAAGACACTGAGCAGCTGGAATTCTGTGATATCTAGCTGTGCACAGGCAGGAAGGTCAATTGATGCCATGGCTTTGTTTTCCCAAATGAAGTTGTCAGGCTATGGGCCAGATTCAATTACACTTGCTAGTTTACTATCTGCTTGTTGCCAAAATGGGAACTTGCATTTTGGGGAGATACTTCATTCCTATATTCTAAGAAACAATCTGGACTTGGAAGGTTTTGTTGGAACTGCTCTTATAGACATGTACGTCAAGTGTGGAAGAATGGACTTTGCTGAAAAGGTGTTTAAGAGCATGAAAGAGCCATGTTTAGCTTCATGGAACTCAATGATCTCTGGTTATGGTTTATTTGGGTTTGACAATCATGTTTTCCTCTGTTACACTAAAATGATGGAGAAGGGGATAAAGCCCAATAAAATAACTTTCTCAGGAATTTTAGCTGCTTGCACTCATGGAGGACTTGTTGAAGAAGGTAGAACATACTTCGAAATCATGAAGAAAGAACTTGGTATAGTGCCAGAGTCACAACATTGTGCATCCATGGTTGGCCTGCTTGGACGGGCAGGCTTGTTTGAAGAGGCAATTCTATTTATCAAAAACATGGAAGTCAATCCAGATTCTGCAGTGTGGGGAGCATTTCTCAGTGCTTGTTGCATTCACCAGGAAGTTAAGCTTGGGGAATCTGTGGCGAAAAAGTTGCTTTTCTCTAACTGTAGAAATGGGGGATTTTTTGTGTTGATGTCAAATCTTTATGCAGCATCAGGGAGGTGGAATGATGTAGCAAAAGTCAGAAAGATGATGCGAGAAATGGGAGAAGATGGTTGTTCAGGTGTTAGCCTTATGGAATGGATTTCCTAG

Protein sequence

MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAFVVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSLICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQEMHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFGEILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLFGFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQHCASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS

Homology

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BLAST of CmaCh03G006000 vs. ExPASy Swiss-Prot
Match: Q9SJ73 (Pentatricopeptide repeat-containing protein At2g04860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E74 PE=2 SV=3)

HSP 1 Score: 708.4 bits (1827), Expect = 8.3e-203
Identity = 352/689 (51.09%), Postives = 476/689 (69.09%), Query Frame = 0


Query: 15  LSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAFVVSSSSSSFAPSSC 74
           LS FHS  KS + G+IS+ P+ +FR LLR  + PN  T S+ ++A   ++S +SF     
Sbjct: 13  LSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQA--TTTSFNSF----- 72

Query: 75  SENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNA 134
               + +  Q+QTH  K G D+F+YV T+ L+LY K G V +A+ LFD++PE+D V WNA
Sbjct: 73  ----KLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNA 132

Query: 135 LISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAG 194
           LI GYSR+G+  D ++LF+ M ++GF+P   TLV+L+P CG      QG+ +H +  K+G
Sbjct: 133 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 192

Query: 195 LDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFK 254
           L+LDSQVKN+L S Y KCA+L   E+LF E+ +K+ VSWNTMIGA+ Q+G   EA+ VFK
Sbjct: 193 LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFK 252

Query: 255 QMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSLICSYVKCGCIHIAE 314
            M E+++  S VT++++LSA+ +   +HC   K G++ ++SVVTSL+C+Y +CGC+  AE
Sbjct: 253 NMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 312

Query: 315 QIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDAVAMVGIIQGITYPD 374
           ++Y S  Q ++V LT+I+S YAEKGDM   V  +S+ + L MK+DAVA+VGI+ G     
Sbjct: 313 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 372

Query: 375 HSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQEMHEKTLSSWNSVIS 434
           H  IG+S HGY +KSGL    LV NG I+MYS+FDD++ V  LF+++ E  L SWNSVIS
Sbjct: 373 HIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVIS 432

Query: 435 SCAQAGRSIDAMALFSQMKLS-GYGPDSITLASLLSACCQNGNLHFGEILHSYILRNNLD 494
            C Q+GR+  A  +F QM L+ G  PD+IT+ASLL+ C Q   L+ G+ LH Y LRNN +
Sbjct: 433 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 492

Query: 495 LEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLFGFDNHVFLCYTKM 554
            E FV TALIDMY KCG    AE VFKS+K PC A+WNSMISGY L G  +    CY +M
Sbjct: 493 NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM 552

Query: 555 MEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQHCASMVGLLGRAGL 614
            EKG+KP++ITF G+L+AC HGG V+EG+  F  M KE GI P  QH A MVGLLGRA L
Sbjct: 553 REKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACL 612

Query: 615 FEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNL 674
           F EA+  I  M++ PDSAVWGA LSAC IH+E+++GE VA+K+   + +NGG +VLMSNL
Sbjct: 613 FTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNL 672

Query: 675 YAASGRWNDVAKVRKMMREMGEDGCSGVS 703
           YA    W+DV +VR MM++ G DG  GVS
Sbjct: 673 YATEAMWDDVVRVRNMMKDNGYDGYLGVS 690

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BLAST of CmaCh03G006000 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.3e-102
Identity = 211/631 (33.44%), Postives = 328/631 (51.98%), Query Frame = 0


Query: 81  EANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALISGYS 140
           E  Q+     K G  Q  +  T  + L+ + G V  A R+F+ I  K  V ++ ++ G++
Sbjct: 52  ELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFA 111

Query: 141 RSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGLDLDSQ 200
           +        + FV MR     P       L+  CG +     GK IH L VK+G  LD  
Sbjct: 112 KVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLF 171

Query: 201 VKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQMLEES 260
               L +MY KC  +     +F  + E+++VSWNT++  + QNG    A+ + K M EE+
Sbjct: 172 AMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231

Query: 261 INTSSVTMVSILSANANPR------SIHCYATKTGLMENVSVVTSLICSYVKCGCIHIAE 320
           +  S +T+VS+L A +  R       IH YA ++G    V++ T+L+  Y KCG +  A 
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291

Query: 321 QIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDAVAMVGIIQGITYPD 380
           Q++   L++N+V+  ++I  Y +  +    + ++ ++    +K   V+++G +       
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351

Query: 381 HSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQEMHEKTLSSWNSVIS 440
               G   H   ++ GL  +  V N  ISMY +  ++D   S+F ++  +TL SWN++I 
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411

Query: 441 SCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFGEILHSYILRNNLDL 500
             AQ GR IDA+  FSQM+     PD+ T  S+++A  +    H  + +H  ++R+ LD 
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK 471

Query: 501 EGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLFGFDNHVFLCYTKMM 560
             FV TAL+DMY KCG +  A  +F  M E  + +WN+MI GYG  GF       + +M 
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQ 531

Query: 561 EKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQHCASMVGLLGRAGLF 620
           +  IKPN +TF  +++AC+H GLVE G   F +MK+   I     H  +MV LLGRAG  
Sbjct: 532 KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRL 591

Query: 621 EEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNLY 680
            EA  FI  M V P   V+GA L AC IH+ V   E  A++L   N  +GG+ VL++N+Y
Sbjct: 592 NEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIY 651

Query: 681 AASGRWNDVAKVRKMMREMGEDGCSGVSLME 706
            A+  W  V +VR  M   G     G S++E
Sbjct: 652 RAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682

[Close]

BLAST of CmaCh03G006000 vs. ExPASy Swiss-Prot
Match: Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)

HSP 1 Score: 375.6 bits (963), Expect = 1.3e-102
Identity = 228/718 (31.75%), Postives = 365/718 (50.84%), Query Frame = 0


Query: 10  LASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCR-VKPNDSTFSLLIKAFVVSSSSSS 69
           L S +L  +++   SY   ++    L  F +++    + P+  T+  +IKA         
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKA--------- 205

Query: 70  FAPSSCSENAEAEANQLQTH--FIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPE 129
                C+  ++     L  H   +K G  + ++V  A +  Y   GFV  A +LFD +PE
Sbjct: 206 -----CAGMSDVGIG-LAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE 265

Query: 130 KDVVSWNALISGYSRSGFNHDTFELFVEMRRR----GFNPCQRTLVSLIPSCGTQHLFVQ 189
           +++VSWN++I  +S +GF+ ++F L  EM        F P   TLV+++P C  +     
Sbjct: 266 RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 325

Query: 190 GKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQ 249
           GK +H   VK  LD +  + N+L  MY KC  +   +++F     KNVVSWNTM+G F  
Sbjct: 326 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 385

Query: 250 NGFFVEAMLVFKQMLE--ESINTSSVTMVSIL------SANANPRSIHCYATKTGLMENV 309
            G       V +QML   E +    VT+++ +      S   + + +HCY+ K   + N 
Sbjct: 386 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 445

Query: 310 SVVTSLICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHL 369
            V  + + SY KCG +  A++++     K + +  A+I G+A+  D        S   HL
Sbjct: 446 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND-----PRLSLDAHL 505

Query: 370 EMKL-----DAVAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFD 429
           +MK+     D+  +  ++   +      +G   HG+ +++ L  D  V    +S+Y    
Sbjct: 506 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 565

Query: 430 DIDAVFSLFQEMHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLS 489
           ++  V +LF  M +K+L SWN+VI+   Q G    A+ +F QM L G     I++  +  
Sbjct: 566 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 625

Query: 490 ACCQNGNLHFGEILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLAS 549
           AC    +L  G   H+Y L++ L+ + F+  +LIDMY K G +  + KVF  +KE   AS
Sbjct: 626 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 685

Query: 550 WNSMISGYGLFGFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMK 609
           WN+MI GYG+ G        + +M   G  P+ +TF G+L AC H GL+ EG  Y + MK
Sbjct: 686 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 745

Query: 610 KELGIVPESQHCASMVGLLGRAGLFEEAILFI-KNMEVNPDSAVWGAFLSACCIHQEVKL 669
              G+ P  +H A ++ +LGRAG  ++A+  + + M    D  +W + LS+C IHQ +++
Sbjct: 746 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 805

Query: 670 GESVAKKLLFSNCRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMG---EDGCSGVSL 704
           GE VA KL          +VL+SNLYA  G+W DV KVR+ M EM    + GCS + L
Sbjct: 806 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIEL 843

[Close]

BLAST of CmaCh03G006000 vs. ExPASy Swiss-Prot
Match: Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.1e-101
Identity = 210/699 (30.04%), Postives = 368/699 (52.65%), Query Frame = 0


Query: 14  SLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAFVVSSSSSSFAPSS 73
           S+  ++S   S+V   +    L  + ++L   V P+ STF  L+KA V   +        
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI---- 161

Query: 74  CSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWN 133
                    + L       G D   +V+++ +  Y + G +    +LFD + +KD V WN
Sbjct: 162 ---------DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 221

Query: 134 ALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKA 193
            +++GY++ G      + F  MR    +P   T   ++  C ++ L   G  +H L V +
Sbjct: 222 VMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 281

Query: 194 GLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVF 253
           G+D +  +KNSL SMY KC   +    LF  +   + V+WN MI  + Q+G   E++  F
Sbjct: 282 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF 341

Query: 254 KQMLEESINTSSVTMVSILSANAN------PRSIHCYATKTGLMENVSVVTSLICSYVKC 313
            +M+   +   ++T  S+L + +        + IHCY  +  +  ++ + ++LI +Y KC
Sbjct: 342 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC 401

Query: 314 GCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDAVAMVGII 373
             + +A+ I+      ++V  TA+ISGY   G     ++++  +  +++  + + +V I+
Sbjct: 402 RGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 461

Query: 374 QGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQEMHEKTLS 433
             I       +G   HG+ +K G    C +    I MY++   ++  + +F+ + ++ + 
Sbjct: 462 PVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV 521

Query: 434 SWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFGEILHSYI 493
           SWNS+I+ CAQ+     A+ +F QM +SG   D +++++ LSAC    +  FG+ +H ++
Sbjct: 522 SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM 581

Query: 494 LRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLFGFDNHVF 553
           ++++L  + +  + LIDMY KCG +  A  VFK+MKE  + SWNS+I+  G  G      
Sbjct: 582 IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSL 641

Query: 554 LCYTKMMEK-GIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQHCASMVG 613
             + +M+EK GI+P++ITF  I+++C H G V+EG  +F  M ++ GI P+ +H A +V 
Sbjct: 642 CLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVD 701

Query: 614 LLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSNCRNGGF 673
           L GRAG   EA   +K+M   PD+ VWG  L AC +H+ V+L E  + KL+  +  N G+
Sbjct: 702 LFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGY 761

Query: 674 FVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLME 706
           +VL+SN +A +  W  V KVR +M+E       G S +E
Sbjct: 762 YVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIE 787

[Close]

BLAST of CmaCh03G006000 vs. ExPASy Swiss-Prot
Match: Q9M9E2 (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.1e-101
Identity = 205/614 (33.39%), Postives = 339/614 (55.21%), Query Frame = 0


Query: 100 VSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMR-RR 159
           +  AFL ++ + G +  A  +F  + E+++ SWN L+ GY++ G+  +   L+  M    
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190

Query: 160 GFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGV 219
           G  P   T   ++ +CG      +GK +H   V+ G +LD  V N+L +MY KC D++  
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250

Query: 220 ELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQMLEESINTSSVTMVSILSA---- 279
            LLF  +  ++++SWN MI  + +NG   E + +F  M   S++   +T+ S++SA    
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310

Query: 280 --NANPRSIHCYATKTGLMENVSVVTSLICSYVKCGCIHIAEQIYMSKLQKNLVALTAII 339
                 R IH Y   TG   ++SV  SL   Y+  G    AE+++    +K++V+ T +I
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370

Query: 340 SGYAEKGDMGAVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDHSGIGLSFHGYGLKSGLI 399
           SGY         +  Y  +    +K D + +  ++           G+  H   +K+ LI
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430

Query: 400 IDCLVANGFISMYSRFDDIDAVFSLFQEMHEKTLSSWNSVISSCAQAGRSIDAMALFSQM 459
              +VAN  I+MYS+   ID    +F  +  K + SW S+I+      R  +A+    QM
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490

Query: 460 KLSGYGPDSITLASLLSACCQNGNLHFGEILHSYILRNNLDLEGFVGTALIDMYVKCGRM 519
           K++   P++ITL + L+AC + G L  G+ +H+++LR  + L+ F+  AL+DMYV+CGRM
Sbjct: 491 KMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 550

Query: 520 DFAEKVFKSMKEPCLASWNSMISGYGLFGFDNHVFLCYTKMMEKGIKPNKITFSGILAAC 579
           + A   F S K+  + SWN +++GY   G  + V   + +M++  ++P++ITF  +L  C
Sbjct: 551 NTAWSQFNSQKKD-VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 610

Query: 580 THGGLVEEGRTYFEIMKKELGIVPESQHCASMVGLLGRAGLFEEAILFIKNMEVNPDSAV 639
           +   +V +G  YF  M ++ G+ P  +H A +V LLGRAG  +EA  FI+ M V PD AV
Sbjct: 611 SKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 670

Query: 640 WGAFLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNLYAASGRWNDVAKVRKMMRE 699
           WGA L+AC IH ++ LGE  A+ +   + ++ G+++L+ NLYA  G+W +VAKVR+MM+E
Sbjct: 671 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 730

Query: 700 MG---EDGCSGVSL 704
            G   + GCS V +
Sbjct: 731 NGLTVDAGCSWVEV 741

[Close]

BLAST of CmaCh03G006000 vs. ExPASy TrEMBL
Match: A0A6J1IKP6 (pentatricopeptide repeat-containing protein At2g04860 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477926 PE=4 SV=1)

HSP 1 Score: 1418.3 bits (3670), Expect = 0.0e+00
Identity = 708/708 (100.00%), Postives = 708/708 (100.00%), Query Frame = 0


Query: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60
           MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF
Sbjct: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60

Query: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
           VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL
Sbjct: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF
Sbjct: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
           VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF
Sbjct: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240

Query: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300
           GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL
Sbjct: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300

Query: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360
           ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA
Sbjct: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420
           VAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE
Sbjct: 361 VAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420

Query: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480
           MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG
Sbjct: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480

Query: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540
           EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF
Sbjct: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540

Query: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600
           GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH
Sbjct: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600

Query: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 660
           CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN
Sbjct: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 709
           CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS
Sbjct: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 708

[Close]

BLAST of CmaCh03G006000 vs. ExPASy TrEMBL
Match: A0A6J1GEF9 (pentatricopeptide repeat-containing protein At2g04860 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453241 PE=4 SV=1)

HSP 1 Score: 1372.5 bits (3551), Expect = 0.0e+00
Identity = 682/708 (96.33%), Postives = 697/708 (98.45%), Query Frame = 0


Query: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60
           MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF
Sbjct: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60

Query: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
           VVSSSSSSFAP SCSENA+AEANQLQ HFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL
Sbjct: 61  VVSSSSSSFAPLSCSENAKAEANQLQIHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FDDIPEKDVVSWNALISGYSRSG+NHD FELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF
Sbjct: 121 FDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
            QGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF
Sbjct: 181 AQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240

Query: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300
           GQNGFFVEAMLVFKQMLEE I+T+SVTMVSILSANANPRSIHCYATKTGL+ENVSVVTSL
Sbjct: 241 GQNGFFVEAMLVFKQMLEERIDTNSVTMVSILSANANPRSIHCYATKTGLVENVSVVTSL 300

Query: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360
           ICSYV+CGCI IAE IYMSKLQKNLVALTAIISGYAEKGDMG+VVKLYSRVQHLEMKLDA
Sbjct: 301 ICSYVRCGCIQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420
           VAMVGIIQGITYPDHSGIGL+FHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE
Sbjct: 361 VAMVGIIQGITYPDHSGIGLAFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420

Query: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480
           M EKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG
Sbjct: 421 MREKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480

Query: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540
           EI+HSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNS+ISGYGLF
Sbjct: 481 EIIHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSLISGYGLF 540

Query: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600
           GF+NH FLCYTKM+EKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH
Sbjct: 541 GFNNHAFLCYTKMLEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600

Query: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 660
           CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGA L+ACCIHQEVKLGESVAK+LLFSN
Sbjct: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGALLNACCIHQEVKLGESVAKRLLFSN 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 709
            RNGGFFVLMSNLYAASGRWNDVA+VRKMMREMGEDGCSGVSLMEWIS
Sbjct: 661 SRNGGFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 708

[Close]

BLAST of CmaCh03G006000 vs. ExPASy TrEMBL
Match: A0A6J1IQT5 (pentatricopeptide repeat-containing protein At2g04860 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477926 PE=4 SV=1)

HSP 1 Score: 1303.5 bits (3372), Expect = 0.0e+00
Identity = 663/708 (93.64%), Postives = 663/708 (93.64%), Query Frame = 0


Query: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60
           MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF
Sbjct: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60

Query: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
           VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL
Sbjct: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF
Sbjct: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
           VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF
Sbjct: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240

Query: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300
           GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL
Sbjct: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300

Query: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360
           ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA
Sbjct: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420
           VAMVGIIQ                                             VFSLFQE
Sbjct: 361 VAMVGIIQ---------------------------------------------VFSLFQE 420

Query: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480
           MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG
Sbjct: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480

Query: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540
           EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF
Sbjct: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540

Query: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600
           GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH
Sbjct: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600

Query: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 660
           CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN
Sbjct: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 709
           CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS
Sbjct: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 663

[Close]

BLAST of CmaCh03G006000 vs. ExPASy TrEMBL
Match: A0A6J1IS45 (pentatricopeptide repeat-containing protein At2g04860 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111477926 PE=4 SV=1)

HSP 1 Score: 1290.4 bits (3338), Expect = 0.0e+00
Identity = 657/708 (92.80%), Postives = 657/708 (92.80%), Query Frame = 0


Query: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60
           MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF
Sbjct: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60

Query: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
           VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL
Sbjct: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF
Sbjct: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
           VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF
Sbjct: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240

Query: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300
           GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL
Sbjct: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300

Query: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360
           ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA
Sbjct: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420
           VAMVGII                                                   QE
Sbjct: 361 VAMVGII---------------------------------------------------QE 420

Query: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480
           MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG
Sbjct: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480

Query: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540
           EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF
Sbjct: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540

Query: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600
           GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH
Sbjct: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600

Query: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 660
           CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN
Sbjct: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 657

Query: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 709
           CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS
Sbjct: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 657

[Close]

BLAST of CmaCh03G006000 vs. ExPASy TrEMBL
Match: A0A6J1GDP5 (pentatricopeptide repeat-containing protein At2g04860 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453241 PE=4 SV=1)

HSP 1 Score: 1258.8 bits (3256), Expect = 0.0e+00
Identity = 638/708 (90.11%), Postives = 652/708 (92.09%), Query Frame = 0


Query: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60
           MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF
Sbjct: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60

Query: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
           VVSSSSSSFAP SCSENA+AEANQLQ HFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL
Sbjct: 61  VVSSSSSSFAPLSCSENAKAEANQLQIHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FDDIPEKDVVSWNALISGYSRSG+NHD FELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF
Sbjct: 121 FDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
            QGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF
Sbjct: 181 AQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240

Query: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300
           GQNGFFVEAMLVFKQMLEE I+T+SVTMVSILSANANPRSIHCYATKTGL+ENVSVVTSL
Sbjct: 241 GQNGFFVEAMLVFKQMLEERIDTNSVTMVSILSANANPRSIHCYATKTGLVENVSVVTSL 300

Query: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360
           ICSYV+CGCI IAE IYMSKLQKNLVALTAIISGYAEKGDMG+VVKLYSRVQHLEMKLDA
Sbjct: 301 ICSYVRCGCIQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420
           VAMVGIIQ                                             VFSLFQE
Sbjct: 361 VAMVGIIQ---------------------------------------------VFSLFQE 420

Query: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480
           M EKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG
Sbjct: 421 MREKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480

Query: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540
           EI+HSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNS+ISGYGLF
Sbjct: 481 EIIHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSLISGYGLF 540

Query: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600
           GF+NH FLCYTKM+EKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH
Sbjct: 541 GFNNHAFLCYTKMLEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600

Query: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 660
           CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGA L+ACCIHQEVKLGESVAK+LLFSN
Sbjct: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGALLNACCIHQEVKLGESVAKRLLFSN 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 709
            RNGGFFVLMSNLYAASGRWNDVA+VRKMMREMGEDGCSGVSLMEWIS
Sbjct: 661 SRNGGFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 663

[Close]

BLAST of CmaCh03G006000 vs. NCBI nr
Match: XP_022977696.1 (pentatricopeptide repeat-containing protein At2g04860 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1418.3 bits (3670), Expect = 0.0e+00
Identity = 708/708 (100.00%), Postives = 708/708 (100.00%), Query Frame = 0


Query: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60
           MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF
Sbjct: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60

Query: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
           VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL
Sbjct: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF
Sbjct: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
           VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF
Sbjct: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240

Query: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300
           GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL
Sbjct: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300

Query: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360
           ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA
Sbjct: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420
           VAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE
Sbjct: 361 VAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420

Query: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480
           MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG
Sbjct: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480

Query: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540
           EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF
Sbjct: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540

Query: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600
           GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH
Sbjct: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600

Query: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 660
           CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN
Sbjct: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 709
           CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS
Sbjct: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 708

[Close]

BLAST of CmaCh03G006000 vs. NCBI nr
Match: XP_023543683.1 (pentatricopeptide repeat-containing protein At2g04860 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1378.2 bits (3566), Expect = 0.0e+00
Identity = 687/708 (97.03%), Postives = 696/708 (98.31%), Query Frame = 0


Query: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60
           MQFTSSVGHLASLS STFHSAFKSYVEGKISTPPLLVFRQLLR RVKPNDSTFSLLIKAF
Sbjct: 1   MQFTSSVGHLASLSHSTFHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAF 60

Query: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
           VVSSSSSSFAPSSCSENA+ EANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL
Sbjct: 61  VVSSSSSSFAPSSCSENAKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FDDIPEKDVVSWNALISGYSRSG+NHD FELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF
Sbjct: 121 FDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
           VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF
Sbjct: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240

Query: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300
           GQNGFFVEAMLVFKQMLE SINT+SVTMVSILSANANPRSIHCYATKTGLMENVSVV SL
Sbjct: 241 GQNGFFVEAMLVFKQMLEGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISL 300

Query: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360
           ICSYVKCGCI IAE IYMSKLQKNLVALTAIISGYAEKGDMG+VVKLYSRVQHLEMKLDA
Sbjct: 301 ICSYVKCGCIQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420
           VAMVGIIQGITYPDHSGIGL+FHGYGLKSGLIIDCLVANGFISMYS+FDDIDAVF+LFQE
Sbjct: 361 VAMVGIIQGITYPDHSGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDDIDAVFTLFQE 420

Query: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480
           MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG
Sbjct: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480

Query: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540
           EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAE VFKSMKEPCLASWNS+ISGYGLF
Sbjct: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLF 540

Query: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600
           GFDNH FLCYT MMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH
Sbjct: 541 GFDNHAFLCYTTMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600

Query: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 660
           CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGA LSACCIHQEVKLGESVAKKLLFSN
Sbjct: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGALLSACCIHQEVKLGESVAKKLLFSN 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 709
           CRNGGFFVLMSNLYAASGRWNDVA+VRKMMREMGEDGCSGVSLMEWIS
Sbjct: 661 CRNGGFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 708

[Close]

BLAST of CmaCh03G006000 vs. NCBI nr
Match: XP_022950030.1 (pentatricopeptide repeat-containing protein At2g04860 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1372.5 bits (3551), Expect = 0.0e+00
Identity = 682/708 (96.33%), Postives = 697/708 (98.45%), Query Frame = 0


Query: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60
           MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF
Sbjct: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60

Query: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
           VVSSSSSSFAP SCSENA+AEANQLQ HFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL
Sbjct: 61  VVSSSSSSFAPLSCSENAKAEANQLQIHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FDDIPEKDVVSWNALISGYSRSG+NHD FELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF
Sbjct: 121 FDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
            QGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF
Sbjct: 181 AQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240

Query: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300
           GQNGFFVEAMLVFKQMLEE I+T+SVTMVSILSANANPRSIHCYATKTGL+ENVSVVTSL
Sbjct: 241 GQNGFFVEAMLVFKQMLEERIDTNSVTMVSILSANANPRSIHCYATKTGLVENVSVVTSL 300

Query: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360
           ICSYV+CGCI IAE IYMSKLQKNLVALTAIISGYAEKGDMG+VVKLYSRVQHLEMKLDA
Sbjct: 301 ICSYVRCGCIQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420
           VAMVGIIQGITYPDHSGIGL+FHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE
Sbjct: 361 VAMVGIIQGITYPDHSGIGLAFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420

Query: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480
           M EKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG
Sbjct: 421 MREKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480

Query: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540
           EI+HSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNS+ISGYGLF
Sbjct: 481 EIIHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSLISGYGLF 540

Query: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600
           GF+NH FLCYTKM+EKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH
Sbjct: 541 GFNNHAFLCYTKMLEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600

Query: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 660
           CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGA L+ACCIHQEVKLGESVAK+LLFSN
Sbjct: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGALLNACCIHQEVKLGESVAKRLLFSN 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 709
            RNGGFFVLMSNLYAASGRWNDVA+VRKMMREMGEDGCSGVSLMEWIS
Sbjct: 661 SRNGGFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 708

[Close]

BLAST of CmaCh03G006000 vs. NCBI nr
Match: KAG6603840.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034021.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1368.6 bits (3541), Expect = 0.0e+00
Identity = 680/708 (96.05%), Postives = 697/708 (98.45%), Query Frame = 0


Query: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60
           MQFTSSVGHLASLS STFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF
Sbjct: 1   MQFTSSVGHLASLSHSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60

Query: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
           VVSSSSSSFAP SCSENA+AEANQLQ HFIKWGFD+FLYVSTAFLDLYSKLGFVKAARRL
Sbjct: 61  VVSSSSSSFAPLSCSENAKAEANQLQIHFIKWGFDRFLYVSTAFLDLYSKLGFVKAARRL 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FDDIPEKDVVSWNALISGYSRSG+NHD FELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF
Sbjct: 121 FDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
           VQGKCIHALGVKAGLDLDSQVKN+LASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF
Sbjct: 181 VQGKCIHALGVKAGLDLDSQVKNTLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240

Query: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300
           GQNGFFVEAMLVFKQMLEE I+T+SVTMVSILSANANPRSIHCYATKTGL+ENVSVVTSL
Sbjct: 241 GQNGFFVEAMLVFKQMLEERIDTNSVTMVSILSANANPRSIHCYATKTGLVENVSVVTSL 300

Query: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360
           ICSYV+CGCI IAE IYMSKLQKNLVALTAIISGYAEKGDMG+VVKLYSRVQHLEMKLDA
Sbjct: 301 ICSYVRCGCIQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420
           VAMVGIIQGITYPDHSGIGL+FHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE
Sbjct: 361 VAMVGIIQGITYPDHSGIGLAFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420

Query: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480
           M EKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG
Sbjct: 421 MREKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480

Query: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540
           EI+HSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNS+ISGYGLF
Sbjct: 481 EIIHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSLISGYGLF 540

Query: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600
           GF+NH FLCYTKM+EKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH
Sbjct: 541 GFNNHAFLCYTKMLEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600

Query: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 660
           CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGA L+ACCIHQEVKLGESVAK+LLFSN
Sbjct: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGALLNACCIHQEVKLGESVAKRLLFSN 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 709
            RNGGFFVLMSNLYAASGRWNDVA+VRKMMREMGEDGCSGVSLMEWIS
Sbjct: 661 SRNGGFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 708

[Close]

BLAST of CmaCh03G006000 vs. NCBI nr
Match: XP_022977698.1 (pentatricopeptide repeat-containing protein At2g04860 isoform X2 [Cucurbita maxima])

HSP 1 Score: 1303.5 bits (3372), Expect = 0.0e+00
Identity = 663/708 (93.64%), Postives = 663/708 (93.64%), Query Frame = 0


Query: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60
           MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF
Sbjct: 1   MQFTSSVGHLASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAF 60

Query: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
           VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL
Sbjct: 61  VVSSSSSSFAPSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF
Sbjct: 121 FDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
           VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF
Sbjct: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240

Query: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300
           GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL
Sbjct: 241 GQNGFFVEAMLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSL 300

Query: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360
           ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA
Sbjct: 301 ICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQE 420
           VAMVGIIQ                                             VFSLFQE
Sbjct: 361 VAMVGIIQ---------------------------------------------VFSLFQE 420

Query: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480
           MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG
Sbjct: 421 MHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFG 480

Query: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540
           EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF
Sbjct: 481 EILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLF 540

Query: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600
           GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH
Sbjct: 541 GFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQH 600

Query: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 660
           CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN
Sbjct: 601 CASMVGLLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSN 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 709
           CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS
Sbjct: 661 CRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 663

[Close]

BLAST of CmaCh03G006000 vs. TAIR 10
Match: AT2G04860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 708.4 bits (1827), Expect = 5.9e-204
Identity = 352/689 (51.09%), Postives = 476/689 (69.09%), Query Frame = 0


Query: 15  LSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAFVVSSSSSSFAPSSC 74
           LS FHS  KS + G+IS+ P+ +FR LLR  + PN  T S+ ++A   ++S +SF     
Sbjct: 13  LSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQA--TTTSFNSF----- 72

Query: 75  SENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNA 134
               + +  Q+QTH  K G D+F+YV T+ L+LY K G V +A+ LFD++PE+D V WNA
Sbjct: 73  ----KLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNA 132

Query: 135 LISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAG 194
           LI GYSR+G+  D ++LF+ M ++GF+P   TLV+L+P CG      QG+ +H +  K+G
Sbjct: 133 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 192

Query: 195 LDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFK 254
           L+LDSQVKN+L S Y KCA+L   E+LF E+ +K+ VSWNTMIGA+ Q+G   EA+ VFK
Sbjct: 193 LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFK 252

Query: 255 QMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSLICSYVKCGCIHIAE 314
            M E+++  S VT++++LSA+ +   +HC   K G++ ++SVVTSL+C+Y +CGC+  AE
Sbjct: 253 NMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 312

Query: 315 QIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDAVAMVGIIQGITYPD 374
           ++Y S  Q ++V LT+I+S YAEKGDM   V  +S+ + L MK+DAVA+VGI+ G     
Sbjct: 313 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 372

Query: 375 HSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQEMHEKTLSSWNSVIS 434
           H  IG+S HGY +KSGL    LV NG I+MYS+FDD++ V  LF+++ E  L SWNSVIS
Sbjct: 373 HIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVIS 432

Query: 435 SCAQAGRSIDAMALFSQMKLS-GYGPDSITLASLLSACCQNGNLHFGEILHSYILRNNLD 494
            C Q+GR+  A  +F QM L+ G  PD+IT+ASLL+ C Q   L+ G+ LH Y LRNN +
Sbjct: 433 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 492

Query: 495 LEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLFGFDNHVFLCYTKM 554
            E FV TALIDMY KCG    AE VFKS+K PC A+WNSMISGY L G  +    CY +M
Sbjct: 493 NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM 552

Query: 555 MEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQHCASMVGLLGRAGL 614
            EKG+KP++ITF G+L+AC HGG V+EG+  F  M KE GI P  QH A MVGLLGRA L
Sbjct: 553 REKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACL 612

Query: 615 FEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNL 674
           F EA+  I  M++ PDSAVWGA LSAC IH+E+++GE VA+K+   + +NGG +VLMSNL
Sbjct: 613 FTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNL 672

Query: 675 YAASGRWNDVAKVRKMMREMGEDGCSGVS 703
           YA    W+DV +VR MM++ G DG  GVS
Sbjct: 673 YATEAMWDDVVRVRNMMKDNGYDGYLGVS 690

[Close]

BLAST of CmaCh03G006000 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 375.6 bits (963), Expect = 9.1e-104
Identity = 211/631 (33.44%), Postives = 328/631 (51.98%), Query Frame = 0


Query: 81  EANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALISGYS 140
           E  Q+     K G  Q  +  T  + L+ + G V  A R+F+ I  K  V ++ ++ G++
Sbjct: 52  ELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFA 111

Query: 141 RSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGLDLDSQ 200
           +        + FV MR     P       L+  CG +     GK IH L VK+G  LD  
Sbjct: 112 KVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLF 171

Query: 201 VKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQMLEES 260
               L +MY KC  +     +F  + E+++VSWNT++  + QNG    A+ + K M EE+
Sbjct: 172 AMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231

Query: 261 INTSSVTMVSILSANANPR------SIHCYATKTGLMENVSVVTSLICSYVKCGCIHIAE 320
           +  S +T+VS+L A +  R       IH YA ++G    V++ T+L+  Y KCG +  A 
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291

Query: 321 QIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDAVAMVGIIQGITYPD 380
           Q++   L++N+V+  ++I  Y +  +    + ++ ++    +K   V+++G +       
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351

Query: 381 HSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQEMHEKTLSSWNSVIS 440
               G   H   ++ GL  +  V N  ISMY +  ++D   S+F ++  +TL SWN++I 
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411

Query: 441 SCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFGEILHSYILRNNLDL 500
             AQ GR IDA+  FSQM+     PD+ T  S+++A  +    H  + +H  ++R+ LD 
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK 471

Query: 501 EGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLFGFDNHVFLCYTKMM 560
             FV TAL+DMY KCG +  A  +F  M E  + +WN+MI GYG  GF       + +M 
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQ 531

Query: 561 EKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQHCASMVGLLGRAGLF 620
           +  IKPN +TF  +++AC+H GLVE G   F +MK+   I     H  +MV LLGRAG  
Sbjct: 532 KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRL 591

Query: 621 EEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNLY 680
            EA  FI  M V P   V+GA L AC IH+ V   E  A++L   N  +GG+ VL++N+Y
Sbjct: 592 NEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIY 651

Query: 681 AASGRWNDVAKVRKMMREMGEDGCSGVSLME 706
            A+  W  V +VR  M   G     G S++E
Sbjct: 652 RAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682

[Close]

BLAST of CmaCh03G006000 vs. TAIR 10
Match: AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 375.6 bits (963), Expect = 9.1e-104
Identity = 228/718 (31.75%), Postives = 365/718 (50.84%), Query Frame = 0


Query: 10  LASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCR-VKPNDSTFSLLIKAFVVSSSSSS 69
           L S +L  +++   SY   ++    L  F +++    + P+  T+  +IKA         
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKA--------- 205

Query: 70  FAPSSCSENAEAEANQLQTH--FIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPE 129
                C+  ++     L  H   +K G  + ++V  A +  Y   GFV  A +LFD +PE
Sbjct: 206 -----CAGMSDVGIG-LAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE 265

Query: 130 KDVVSWNALISGYSRSGFNHDTFELFVEMRRR----GFNPCQRTLVSLIPSCGTQHLFVQ 189
           +++VSWN++I  +S +GF+ ++F L  EM        F P   TLV+++P C  +     
Sbjct: 266 RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 325

Query: 190 GKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQ 249
           GK +H   VK  LD +  + N+L  MY KC  +   +++F     KNVVSWNTM+G F  
Sbjct: 326 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 385

Query: 250 NGFFVEAMLVFKQMLE--ESINTSSVTMVSIL------SANANPRSIHCYATKTGLMENV 309
            G       V +QML   E +    VT+++ +      S   + + +HCY+ K   + N 
Sbjct: 386 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 445

Query: 310 SVVTSLICSYVKCGCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHL 369
            V  + + SY KCG +  A++++     K + +  A+I G+A+  D        S   HL
Sbjct: 446 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND-----PRLSLDAHL 505

Query: 370 EMKL-----DAVAMVGIIQGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFD 429
           +MK+     D+  +  ++   +      +G   HG+ +++ L  D  V    +S+Y    
Sbjct: 506 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 565

Query: 430 DIDAVFSLFQEMHEKTLSSWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLS 489
           ++  V +LF  M +K+L SWN+VI+   Q G    A+ +F QM L G     I++  +  
Sbjct: 566 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 625

Query: 490 ACCQNGNLHFGEILHSYILRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLAS 549
           AC    +L  G   H+Y L++ L+ + F+  +LIDMY K G +  + KVF  +KE   AS
Sbjct: 626 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 685

Query: 550 WNSMISGYGLFGFDNHVFLCYTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMK 609
           WN+MI GYG+ G        + +M   G  P+ +TF G+L AC H GL+ EG  Y + MK
Sbjct: 686 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 745

Query: 610 KELGIVPESQHCASMVGLLGRAGLFEEAILFI-KNMEVNPDSAVWGAFLSACCIHQEVKL 669
              G+ P  +H A ++ +LGRAG  ++A+  + + M    D  +W + LS+C IHQ +++
Sbjct: 746 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 805

Query: 670 GESVAKKLLFSNCRNGGFFVLMSNLYAASGRWNDVAKVRKMMREMG---EDGCSGVSL 704
           GE VA KL          +VL+SNLYA  G+W DV KVR+ M EM    + GCS + L
Sbjct: 806 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIEL 843

[Close]

BLAST of CmaCh03G006000 vs. TAIR 10
Match: AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 372.5 bits (955), Expect = 7.7e-103
Identity = 205/614 (33.39%), Postives = 339/614 (55.21%), Query Frame = 0


Query: 100 VSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALISGYSRSGFNHDTFELFVEMR-RR 159
           +  AFL ++ + G +  A  +F  + E+++ SWN L+ GY++ G+  +   L+  M    
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190

Query: 160 GFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGV 219
           G  P   T   ++ +CG      +GK +H   V+ G +LD  V N+L +MY KC D++  
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250

Query: 220 ELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQMLEESINTSSVTMVSILSA---- 279
            LLF  +  ++++SWN MI  + +NG   E + +F  M   S++   +T+ S++SA    
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310

Query: 280 --NANPRSIHCYATKTGLMENVSVVTSLICSYVKCGCIHIAEQIYMSKLQKNLVALTAII 339
                 R IH Y   TG   ++SV  SL   Y+  G    AE+++    +K++V+ T +I
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370

Query: 340 SGYAEKGDMGAVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDHSGIGLSFHGYGLKSGLI 399
           SGY         +  Y  +    +K D + +  ++           G+  H   +K+ LI
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430

Query: 400 IDCLVANGFISMYSRFDDIDAVFSLFQEMHEKTLSSWNSVISSCAQAGRSIDAMALFSQM 459
              +VAN  I+MYS+   ID    +F  +  K + SW S+I+      R  +A+    QM
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490

Query: 460 KLSGYGPDSITLASLLSACCQNGNLHFGEILHSYILRNNLDLEGFVGTALIDMYVKCGRM 519
           K++   P++ITL + L+AC + G L  G+ +H+++LR  + L+ F+  AL+DMYV+CGRM
Sbjct: 491 KMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 550

Query: 520 DFAEKVFKSMKEPCLASWNSMISGYGLFGFDNHVFLCYTKMMEKGIKPNKITFSGILAAC 579
           + A   F S K+  + SWN +++GY   G  + V   + +M++  ++P++ITF  +L  C
Sbjct: 551 NTAWSQFNSQKKD-VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 610

Query: 580 THGGLVEEGRTYFEIMKKELGIVPESQHCASMVGLLGRAGLFEEAILFIKNMEVNPDSAV 639
           +   +V +G  YF  M ++ G+ P  +H A +V LLGRAG  +EA  FI+ M V PD AV
Sbjct: 611 SKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 670

Query: 640 WGAFLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNLYAASGRWNDVAKVRKMMRE 699
           WGA L+AC IH ++ LGE  A+ +   + ++ G+++L+ NLYA  G+W +VAKVR+MM+E
Sbjct: 671 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 730

Query: 700 MG---EDGCSGVSL 704
            G   + GCS V +
Sbjct: 731 NGLTVDAGCSWVEV 741

[Close]

BLAST of CmaCh03G006000 vs. TAIR 10
Match: AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 372.5 bits (955), Expect = 7.7e-103
Identity = 210/699 (30.04%), Postives = 368/699 (52.65%), Query Frame = 0


Query: 14  SLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAFVVSSSSSSFAPSS 73
           S+  ++S   S+V   +    L  + ++L   V P+ STF  L+KA V   +        
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI---- 161

Query: 74  CSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWN 133
                    + L       G D   +V+++ +  Y + G +    +LFD + +KD V WN
Sbjct: 162 ---------DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 221

Query: 134 ALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKA 193
            +++GY++ G      + F  MR    +P   T   ++  C ++ L   G  +H L V +
Sbjct: 222 VMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 281

Query: 194 GLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVF 253
           G+D +  +KNSL SMY KC   +    LF  +   + V+WN MI  + Q+G   E++  F
Sbjct: 282 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF 341

Query: 254 KQMLEESINTSSVTMVSILSANAN------PRSIHCYATKTGLMENVSVVTSLICSYVKC 313
            +M+   +   ++T  S+L + +        + IHCY  +  +  ++ + ++LI +Y KC
Sbjct: 342 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC 401

Query: 314 GCIHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDAVAMVGII 373
             + +A+ I+      ++V  TA+ISGY   G     ++++  +  +++  + + +V I+
Sbjct: 402 RGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 461

Query: 374 QGITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQEMHEKTLS 433
             I       +G   HG+ +K G    C +    I MY++   ++  + +F+ + ++ + 
Sbjct: 462 PVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV 521

Query: 434 SWNSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFGEILHSYI 493
           SWNS+I+ CAQ+     A+ +F QM +SG   D +++++ LSAC    +  FG+ +H ++
Sbjct: 522 SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM 581

Query: 494 LRNNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLFGFDNHVF 553
           ++++L  + +  + LIDMY KCG +  A  VFK+MKE  + SWNS+I+  G  G      
Sbjct: 582 IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSL 641

Query: 554 LCYTKMMEK-GIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQHCASMVG 613
             + +M+EK GI+P++ITF  I+++C H G V+EG  +F  M ++ GI P+ +H A +V 
Sbjct: 642 CLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVD 701

Query: 614 LLGRAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSNCRNGGF 673
           L GRAG   EA   +K+M   PD+ VWG  L AC +H+ V+L E  + KL+  +  N G+
Sbjct: 702 LFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGY 761

Query: 674 FVLMSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLME 706
           +VL+SN +A +  W  V KVR +M+E       G S +E
Sbjct: 762 YVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIE 787

The following BLAST results are available for this feature:

BLAST of CmaCh03G006000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ73	8.3e-203	51.09	Pentatricopeptide repeat-containing protein At2g04860 OS=Arabidopsis thaliana OX...	[more]
Q3E6Q1	1.3e-102	33.44	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
Q0WN60	1.3e-102	31.75	Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX...	[more]
Q9STE1	1.1e-101	30.04	Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX...	[more]
Q9M9E2	1.1e-101	33.39	Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop...	[more]

BLAST of CmaCh03G006000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IKP6	0.0e+00	100.00	pentatricopeptide repeat-containing protein At2g04860 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1GEF9	0.0e+00	96.33	pentatricopeptide repeat-containing protein At2g04860 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1IQT5	0.0e+00	93.64	pentatricopeptide repeat-containing protein At2g04860 isoform X2 OS=Cucurbita ma...	[more]
A0A6J1IS45	0.0e+00	92.80	pentatricopeptide repeat-containing protein At2g04860 isoform X3 OS=Cucurbita ma...	[more]
A0A6J1GDP5	0.0e+00	90.11	pentatricopeptide repeat-containing protein At2g04860 isoform X2 OS=Cucurbita mo...	[more]

BLAST of CmaCh03G006000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977696.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At2g04860 isoform X1 [Cucurbita maxi...	[more]
XP_023543683.1	0.0e+00	97.03	pentatricopeptide repeat-containing protein At2g04860 [Cucurbita pepo subsp. pep...	[more]
XP_022950030.1	0.0e+00	96.33	pentatricopeptide repeat-containing protein At2g04860 isoform X1 [Cucurbita mosc...	[more]
KAG6603840.1	0.0e+00	96.05	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022977698.1	0.0e+00	93.64	pentatricopeptide repeat-containing protein At2g04860 isoform X2 [Cucurbita maxi...	[more]

BLAST of CmaCh03G006000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04860.1	5.9e-204	51.09	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G11290.1	9.1e-104	33.44	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G18485.1	9.1e-104	31.75	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G15510.1	7.7e-103	33.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21300.1	7.7e-103	30.04	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 500..524 e-value: 3.6E-4 score: 18.5 coord: 130..162 e-value: 1.9E-5 score: 22.5 coord: 529..561 e-value: 1.5E-4 score: 19.7 coord: 428..460 e-value: 7.6E-7 score: 26.9 coord: 231..261 e-value: 5.7E-7 score: 27.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 231..260 e-value: 8.3E-8 score: 32.0 coord: 500..524 e-value: 5.4E-5 score: 23.2 coord: 529..558 e-value: 0.0031 score: 17.6 coord: 297..318 e-value: 1.3 score: 9.4 coord: 399..424 e-value: 0.036 score: 14.3 coord: 563..590 e-value: 0.9 score: 9.9 coord: 327..350 e-value: 0.6 score: 10.5 coord: 603..625 e-value: 1.2 score: 9.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 427..473 e-value: 2.2E-8 score: 34.2 coord: 127..173 e-value: 1.6E-8 score: 34.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 526..560 score: 8.95544
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 425..459 score: 11.279235
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 229..263 score: 10.873667
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 128..162 score: 13.022082
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 185..280 e-value: 2.9E-16 score: 61.3 coord: 281..372 e-value: 3.5E-9 score: 38.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 543..707 e-value: 1.3E-23 score: 85.8 coord: 374..479 e-value: 1.6E-20 score: 75.7 coord: 480..542 e-value: 3.3E-9 score: 38.6 coord: 34..184 e-value: 7.0E-22 score: 80.2
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 227..317
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 318..706 coord: 46..227
None	No IPR available	PANTHER	PTHR24015:SF502	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 227..317
None	No IPR available	PANTHER	PTHR24015:SF502	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 318..706 coord: 46..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G006000.1	CmaCh03G006000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding