CmaCh03G005880 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh03G005880
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr03: 5274805 .. 5275245 (-)
RNA-Seq ExpressionCmaCh03G005880
SyntenyCmaCh03G005880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAATTGCATCAACGCAGCCCATTTCCGACCTCTGCAAAAGTTGAAACATTTGATATGCTGTGAAGGAGAAGATTTAAGCTTGGCATTGCCCATTGAAAAGATAGCTTCTGGAACTTATAAAGGCCTAAACCTAACAACCCAAGACTTTACAACTTCAAGTGCTGTGCTAGAAGTTGACCGTGGGGCTCCTCCTCCACTGCCTGTTCGTATTGATGATGATGATGATGCTGTTAGCAAGCCTGCTGAATTGTGCAAACTCCCCAAGATCACCACCATTGTGGTTAGCAAACAACAGCTCGAGTTGATCTTGAGAAACTCCGGAAAGTTTGCCTCTAAAGGTATTGCTGTTCAATTCTCTGATAGTTTCGAGTTCGACGATCGACGCCCCAGGTGGTGCCCCGCCTTGCCTACAATTCTCGAGGTTCATAATTACTAG

mRNA sequence

ATGGGGAATTGCATCAACGCAGCCCATTTCCGACCTCTGCAAAAGTTGAAACATTTGATATGCTGTGAAGGAGAAGATTTAAGCTTGGCATTGCCCATTGAAAAGATAGCTTCTGGAACTTATAAAGGCCTAAACCTAACAACCCAAGACTTTACAACTTCAAGTGCTGTGCTAGAAGTTGACCGTGGGGCTCCTCCTCCACTGCCTGTTCGTATTGATGATGATGATGATGCTGTTAGCAAGCCTGCTGAATTGTGCAAACTCCCCAAGATCACCACCATTGTGGTTAGCAAACAACAGCTCGAGTTGATCTTGAGAAACTCCGGAAAGTTTGCCTCTAAAGGTATTGCTGTTCAATTCTCTGATAGTTTCGAGTTCGACGATCGACGCCCCAGGTGGTGCCCCGCCTTGCCTACAATTCTCGAGGTTCATAATTACTAG

Coding sequence (CDS)

ATGGGGAATTGCATCAACGCAGCCCATTTCCGACCTCTGCAAAAGTTGAAACATTTGATATGCTGTGAAGGAGAAGATTTAAGCTTGGCATTGCCCATTGAAAAGATAGCTTCTGGAACTTATAAAGGCCTAAACCTAACAACCCAAGACTTTACAACTTCAAGTGCTGTGCTAGAAGTTGACCGTGGGGCTCCTCCTCCACTGCCTGTTCGTATTGATGATGATGATGATGCTGTTAGCAAGCCTGCTGAATTGTGCAAACTCCCCAAGATCACCACCATTGTGGTTAGCAAACAACAGCTCGAGTTGATCTTGAGAAACTCCGGAAAGTTTGCCTCTAAAGGTATTGCTGTTCAATTCTCTGATAGTTTCGAGTTCGACGATCGACGCCCCAGGTGGTGCCCCGCCTTGCCTACAATTCTCGAGGTTCATAATTACTAG

Protein sequence

MGNCINAAHFRPLQKLKHLICCEGEDLSLALPIEKIASGTYKGLNLTTQDFTTSSAVLEVDRGAPPPLPVRIDDDDDAVSKPAELCKLPKITTIVVSKQQLELILRNSGKFASKGIAVQFSDSFEFDDRRPRWCPALPTILEVHNY
Homology
BLAST of CmaCh03G005880 vs. ExPASy TrEMBL
Match: A0A0A0KHP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511050 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.3e-41
Identity = 99/147 (67.35%), Postives = 107/147 (72.79%), Query Frame = 0

Query: 1   MGNCINAAHFRPLQKLKHLICCEGEDLSLALPIEKIASGTYKGLNLTTQDFTTSSAVLEV 60
           MGNCIN  HF PLQK+K  ICCE EDL+LALPIE IA+          Q FTTSSAV E 
Sbjct: 1   MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAA-------CKNQAFTTSSAVAEA 60

Query: 61  D-RGAPPPLPVRIDDDDDAVSKPAELCKLPKITTIVVSKQQLELILRNSGKFASKGIAVQ 120
           +    PPPLPVRI   D ++ KPA+LCKLPK TTIVVSKQQLELILR S  F SKGIAVQ
Sbjct: 61  EVEHGPPPLPVRI---DHSIVKPADLCKLPK-TTIVVSKQQLELILRKSKNFGSKGIAVQ 120

Query: 121 FSDSFEFDDRRPRWCPALPTILEVHNY 147
           FSDSF+ DD  PRW PALPTI EV NY
Sbjct: 121 FSDSFKVDDGCPRWHPALPTIPEVRNY 136

BLAST of CmaCh03G005880 vs. ExPASy TrEMBL
Match: A0A5D3CLY8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00250 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.8e-37
Identity = 94/147 (63.95%), Postives = 103/147 (70.07%), Query Frame = 0

Query: 1   MGNCINAAHFRPLQKLKHLICCEGEDLSLALPIEKIAS-GTYKGLNLTTQDFTTSSAVLE 60
           MGNCIN  HF PLQK+K  ICCE E L L LPI  +A+ G  K     +Q FTTSSAV E
Sbjct: 1   MGNCINTHHFPPLQKIKGFICCEVEGLDLGLPIGNVAAYGDCK-----SQAFTTSSAVAE 60

Query: 61  VDRGAPPPLPVRIDDDDDAVSKPAELCKLPKITTIVVSKQQLELILRNSGKFASKGIAVQ 120
           V   +PPPLPVRI   D ++ KPA+  KLPK  TIVVSKQQLELILR S  F SKGIAVQ
Sbjct: 61  VQH-SPPPLPVRI---DHSIVKPADKSKLPK-ATIVVSKQQLELILRKSKNFGSKGIAVQ 120

Query: 121 FSDSFEFDDRRPRWCPALPTILEVHNY 147
           FSD F+ DD  PRW PALPTI EV NY
Sbjct: 121 FSDRFKVDDGCPRWHPALPTIPEVRNY 137

BLAST of CmaCh03G005880 vs. ExPASy TrEMBL
Match: A0A6A1W907 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G006267 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.7e-10
Identity = 53/162 (32.72%), Postives = 76/162 (46.91%), Query Frame = 0

Query: 1   MGNCINAAHFRPLQKLKHLICCEGE-DLSLALPIEKIASGTYKGLNLTTQDFTTSSAVLE 60
           MGNC +       +K++ L+  EGE + S   P+EKI  G Y G  L        S +L 
Sbjct: 1   MGNCADVMLRPTEEKIRVLVFNEGEKEFSARTPVEKITCGPYSGFKLVHHS-QPDSPLLP 60

Query: 61  VDRGAP---------------PPLPVRIDDDDDAVSKPAELCKLPKITTIVVSKQQLELI 120
             R  P               PP+P R  + +    K  +         IVV+K QLEL+
Sbjct: 61  DARLQPGELYYLVPLQAQPHHPPIPSRTANQETGKQKKVK---------IVVTKGQLELL 120

Query: 121 LRNSGKFASKGIAVQFSDSFEFDDRRPRWCPALPTILEVHNY 147
           LR++ KF SK IA+    SF+  + R +W P+L  I EVH++
Sbjct: 121 LRSTDKFKSKDIAIHCLGSFQVGEGRRKWRPSLTMIPEVHSF 152

BLAST of CmaCh03G005880 vs. ExPASy TrEMBL
Match: B9HD50 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G018200 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.6e-10
Identity = 56/155 (36.13%), Postives = 83/155 (53.55%), Query Frame = 0

Query: 1   MGNCINAAHFRPLQKLKHLICCEGE-DLSLALPIEKIASGTYKGLNL--TTQDFTTSSAV 60
           MGNCI+   +   ++ K LI   GE +   +  ++KI SG Y G  L  +   +      
Sbjct: 1   MGNCIDVLSYSSAERSKVLIHNGGEKEFKSSTRVKKITSGRYGGYMLVHSALPYVPLPPD 60

Query: 61  LEVDRGA----PPPL--PVRIDDDDDAVSKPAELCKLPKITTIVVSKQQLELILRNSGKF 120
             ++ G      P L  P R++       +  E C   K+  IVV++QQLEL+LRNS +F
Sbjct: 61  TRLEPGVVYYLMPSLGQPCRLEVSSKLAGQ--ETCASRKV-KIVVTRQQLELLLRNSKQF 120

Query: 121 ASKGIAVQFSDSFEFDDRRPRWCPALPTILEVHNY 147
            SKGIAV+FS+SF+  +R  +W P+L TI EV  +
Sbjct: 121 RSKGIAVRFSESFKEGER--KWRPSLVTIPEVQKF 150

BLAST of CmaCh03G005880 vs. ExPASy TrEMBL
Match: A0A5N5M953 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_008876 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 6.7e-09
Identity = 57/152 (37.50%), Postives = 81/152 (53.29%), Query Frame = 0

Query: 1   MGNCINAAHFRPLQKLKHLICCEGE-DLSLALPIEKIASGTYKGLNLTTQDFTTS----S 60
           MGNCI+       ++ K LI   GE +   + P++KI SG Y G  L  +    +     
Sbjct: 1   MGNCIDFMPCSSGERSKVLIHNGGEKEFKSSTPVKKITSGRYGGYILVNRALPYAPLPPD 60

Query: 61  AVLEVDR--GAPPPL--PVRIDDDDDAVSKPAELCKLPKITTIVVSKQQLELILRNSGKF 120
            VLE        PPL  P R++       +  E C   K+  IVV++QQLEL+LRNS + 
Sbjct: 61  TVLEPGEVYHLMPPLDQPSRLEVSSKLTGQ--EACAGRKV-KIVVTRQQLELLLRNSKQL 120

Query: 121 ASKGIAVQFSDSFEFDDRRPRWCPALPTILEV 144
             +GIAVQFS+SF+  + + +W P+L TI EV
Sbjct: 121 KLRGIAVQFSESFK--EGKRKWQPSLVTIPEV 147

BLAST of CmaCh03G005880 vs. NCBI nr
Match: KAG6603830.1 (hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.0 bits (598), Expect = 4.2e-58
Identity = 124/146 (84.93%), Postives = 124/146 (84.93%), Query Frame = 0

Query: 1   MGNCINAAHFRPLQKLKHLICCEGEDLSLALPIEKIASGTYKGLNLTTQDFTTSSAVLEV 60
           MGNCIN AHFRPLQKLK LICCEGEDLSLALPIEKIASG Y          TTSSAVLEV
Sbjct: 1   MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIASGAY----------TTSSAVLEV 60

Query: 61  DRGAPPPLPVRIDDDDDAVSKPAELCKLPKITTIVVSKQQLELILRNSGKFASKGIAVQF 120
           DRGA PPLPV I DDDDAVSKP  LCKLPK TTIVVSKQQLELILRNS KFASKGIAVQF
Sbjct: 61  DRGA-PPLPVSI-DDDDAVSKPDALCKLPKTTTIVVSKQQLELILRNSRKFASKGIAVQF 120

Query: 121 SDSFEFDDRRPRWCPALPTILEVHNY 147
           SDSFE DDR PRWCPALPTILEVHNY
Sbjct: 121 SDSFEVDDRCPRWCPALPTILEVHNY 134

BLAST of CmaCh03G005880 vs. NCBI nr
Match: KAE8647639.1 (hypothetical protein Csa_004428 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 3.4e-39
Identity = 96/143 (67.13%), Postives = 104/143 (72.73%), Query Frame = 0

Query: 1   MGNCINAAHFRPLQKLKHLICCEGEDLSLALPIEKIASGTYKGLNLTTQDFTTSSAVLEV 60
           MGNCIN  HF PLQK+K  ICCE EDL+LALPIE IA+          Q FTTSSAV E 
Sbjct: 1   MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAA-------CKNQAFTTSSAVAEA 60

Query: 61  D-RGAPPPLPVRIDDDDDAVSKPAELCKLPKITTIVVSKQQLELILRNSGKFASKGIAVQ 120
           +    PPPLPVRI   D ++ KPA+LCKLPK TTIVVSKQQLELILR S  F SKGIAVQ
Sbjct: 61  EVEHGPPPLPVRI---DHSIVKPADLCKLPK-TTIVVSKQQLELILRKSKNFGSKGIAVQ 120

Query: 121 FSDSFEFDDRRPRWCPALPTILE 143
           FSDSF+ DD  PRW PALPTI E
Sbjct: 121 FSDSFKVDDGCPRWHPALPTIPE 132

BLAST of CmaCh03G005880 vs. NCBI nr
Match: KAA0025575.1 (hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa] >TYK12450.1 hypothetical protein E5676_scaffold255G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-36
Identity = 94/147 (63.95%), Postives = 103/147 (70.07%), Query Frame = 0

Query: 1   MGNCINAAHFRPLQKLKHLICCEGEDLSLALPIEKIAS-GTYKGLNLTTQDFTTSSAVLE 60
           MGNCIN  HF PLQK+K  ICCE E L L LPI  +A+ G  K     +Q FTTSSAV E
Sbjct: 1   MGNCINTHHFPPLQKIKGFICCEVEGLDLGLPIGNVAAYGDCK-----SQAFTTSSAVAE 60

Query: 61  VDRGAPPPLPVRIDDDDDAVSKPAELCKLPKITTIVVSKQQLELILRNSGKFASKGIAVQ 120
           V   +PPPLPVRI   D ++ KPA+  KLPK  TIVVSKQQLELILR S  F SKGIAVQ
Sbjct: 61  VQH-SPPPLPVRI---DHSIVKPADKSKLPK-ATIVVSKQQLELILRKSKNFGSKGIAVQ 120

Query: 121 FSDSFEFDDRRPRWCPALPTILEVHNY 147
           FSD F+ DD  PRW PALPTI EV NY
Sbjct: 121 FSDRFKVDDGCPRWHPALPTIPEVRNY 137

BLAST of CmaCh03G005880 vs. NCBI nr
Match: KAG6594706.1 (hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-29
Identity = 84/147 (57.14%), Postives = 95/147 (64.63%), Query Frame = 0

Query: 1   MGNCINAAHFRPLQKLKHLICCEGEDLSLALPIEKIASGTYKGLNLTTQDFTTSSAVLEV 60
           MGNCI++ H                   LA+P+EKIA     GL LT       SAVLEV
Sbjct: 1   MGNCISSPHL----------------YDLAVPVEKIA-----GLKLT-------SAVLEV 60

Query: 61  DRG-APPPLPVRIDDDDDAVSKPAELCKLPKITTIVVSKQQLELILRNSGKFASKGIAVQ 120
            RG A PP  V IDDDDD ++KPA LCKLPK  TIVVSK+QLE +L NS +F S+GIAVQ
Sbjct: 61  GRGAATPPAHVLIDDDDD-ITKPAALCKLPK-ATIVVSKEQLEFLLTNSQQFGSQGIAVQ 117

Query: 121 FSDSFEFDDRRPRWCPALPTILEVHNY 147
           FSDSF+FD    RWCP LPTILEVHNY
Sbjct: 121 FSDSFKFDRSCSRWCPVLPTILEVHNY 117

BLAST of CmaCh03G005880 vs. NCBI nr
Match: KAF9679416.1 (hypothetical protein SADUNF_Sadunf06G0012900 [Salix dunnii])

HSP 1 Score: 75.5 bits (184), Expect = 4.3e-10
Identity = 57/152 (37.50%), Postives = 84/152 (55.26%), Query Frame = 0

Query: 1   MGNCINAAHFRPLQKLKHLICCEGE-DLSLALPIEKIASGTYKGLNLTTQDFTTSS---- 60
           MGNCI+   +   ++ + LI   GE +   + P++KI SG Y G  L  ++   +S    
Sbjct: 1   MGNCIDVMPYSSAERSRVLIHNGGEKEFRSSTPVKKITSGRYGGYILVKRELPYASLPPD 60

Query: 61  AVLEVDR--GAPPPL--PVRIDDDDDAVSKPAELCKLPKITTIVVSKQQLELILRNSGKF 120
            VLE        PPL  P R++       +  E C   K+  IVV++QQLEL+LRNS + 
Sbjct: 61  TVLEPGEVYYLMPPLDQPYRLEVSSKLTGQ--ETCAGRKV-KIVVTRQQLELLLRNSKQL 120

Query: 121 ASKGIAVQFSDSFEFDDRRPRWCPALPTILEV 144
             +GIAVQFS+SF+  + + +W P+L TI EV
Sbjct: 121 KLRGIAVQFSESFK--EGKRKWQPSLVTIPEV 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KHP31.3e-4167.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511050 PE=4 SV=1[more]
A0A5D3CLY85.8e-3763.95Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6A1W9072.7e-1032.72Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G006267 PE=4 SV=1[more]
B9HD504.6e-1036.13Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G018200 PE=4 ... [more]
A0A5N5M9536.7e-0937.50Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_008876 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG6603830.14.2e-5884.93hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8647639.13.4e-3967.13hypothetical protein Csa_004428 [Cucumis sativus][more]
KAA0025575.11.2e-3663.95hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa] >TYK1245... [more]
KAG6594706.14.1e-2957.14hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAF9679416.14.3e-1037.50hypothetical protein SADUNF_Sadunf06G0012900 [Salix dunnii][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33148PLASTID MOVEMENT IMPAIRED PROTEIN-RELATEDcoord: 1..144
NoneNo IPR availablePANTHERPTHR33148:SF50SUBFAMILY NOT NAMEDcoord: 1..144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G005880.1CmaCh03G005880.1mRNA