CmaCh03G005230 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G005230
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	biquitin domain-containing protein 7SL RNA1-like
Location	Cma_Chr03: 5010998 .. 5011813 (+)
RNA-Seq Expression	CmaCh03G005230
Synteny	CmaCh03G005230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTGTTGTTCGTACCTGAGAAAGGAGAGGCGTTCGCCATTGAAGTTGGTTTCTTCGATACTGTTTTGGAAATCAAAGAGAAGATTCAAAAATATCACCATATCCCCATCCCCAAACAAACCCTAATCTTCAATGGCCACGTCCTCCAAGACGACCGCGACGTCGAATTCTGCGAAATCCTCCAGCATTCTCGCATTCAACTCCTCGTGGCTTCCGAATCCCAAAACAATTCTCAATCCCAATCCCAGCCCCAACCCCAAATCGACCCGAACCATTCAATCGGGCGCCTCAAACAGAGGATCCACGACATCAACTCTGTGGGACCCATCAACGGGATCATGCTCCAATCCAATGCCTCTCCTACCGAGTTACAGGATCAACGTTCCTTGCGTGACAGCGAGATGTCGGAGAATTCCGAGGTTGAGGTTTGTTTGCGGCCGTCGCCTACAGTTTCAACCGCTGCGCTTGGGATGACAACGCCACCGCCGCAGCCGTCGACGACAACGACAACGGCAGCGGCTGCAACGGTGGCAACGAGTGGGTCGTCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTGGGAACTCAAAGATACCAATGGAAGTGAACCCAACAGATAACGTTGGGGAATTGAAGAAAGAGCTGCAAAAGCTACAGCAGAGACTGCATTTTCATCTGCCACCAGAGGGTTTCTTTTTCATTTATGACCGCGACGTTATGGACGAAGACCGCTCCTTCCGTTGGCATGGTGTAGCCCACGGCGATACGATTGAGATCTTTAATGGCAGCGTTTCTGGCGGATCTTAA

mRNA sequence

ATGGATGTGTTGTTCGTACCTGAGAAAGGAGAGGCGTTCGCCATTGAAGTTGGTTTCTTCGATACTGTTTTGGAAATCAAAGAGAAGATTCAAAAATATCACCATATCCCCATCCCCAAACAAACCCTAATCTTCAATGGCCACGTCCTCCAAGACGACCGCGACGTCGAATTCTGCGAAATCCTCCAGCATTCTCGCATTCAACTCCTCGTGGCTTCCGAATCCCAAAACAATTCTCAATCCCAATCCCAGCCCCAACCCCAAATCGACCCGAACCATTCAATCGGGCGCCTCAAACAGAGGATCCACGACATCAACTCTGTGGGACCCATCAACGGGATCATGCTCCAATCCAATGCCTCTCCTACCGAGTTACAGGATCAACGTTCCTTGCGTGACAGCGAGATGTCGGAGAATTCCGAGGTTGAGGTTTGTTTGCGGCCGTCGCCTACAGTTTCAACCGCTGCGCTTGGGATGACAACGCCACCGCCGCAGCCGTCGACGACAACGACAACGGCAGCGGCTGCAACGGTGGCAACGAGTGGGTCGTCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTGGGAACTCAAAGATACCAATGGAAGTGAACCCAACAGATAACGTTGGGGAATTGAAGAAAGAGCTGCAAAAGCTACAGCAGAGACTGCATTTTCATCTGCCACCAGAGGGTTTCTTTTTCATTTATGACCGCGACGTTATGGACGAAGACCGCTCCTTCCGTTGGCATGGTGTAGCCCACGGCGATACGATTGAGATCTTTAATGGCAGCGTTTCTGGCGGATCTTAA

Coding sequence (CDS)

ATGGATGTGTTGTTCGTACCTGAGAAAGGAGAGGCGTTCGCCATTGAAGTTGGTTTCTTCGATACTGTTTTGGAAATCAAAGAGAAGATTCAAAAATATCACCATATCCCCATCCCCAAACAAACCCTAATCTTCAATGGCCACGTCCTCCAAGACGACCGCGACGTCGAATTCTGCGAAATCCTCCAGCATTCTCGCATTCAACTCCTCGTGGCTTCCGAATCCCAAAACAATTCTCAATCCCAATCCCAGCCCCAACCCCAAATCGACCCGAACCATTCAATCGGGCGCCTCAAACAGAGGATCCACGACATCAACTCTGTGGGACCCATCAACGGGATCATGCTCCAATCCAATGCCTCTCCTACCGAGTTACAGGATCAACGTTCCTTGCGTGACAGCGAGATGTCGGAGAATTCCGAGGTTGAGGTTTGTTTGCGGCCGTCGCCTACAGTTTCAACCGCTGCGCTTGGGATGACAACGCCACCGCCGCAGCCGTCGACGACAACGACAACGGCAGCGGCTGCAACGGTGGCAACGAGTGGGTCGTCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTGGGAACTCAAAGATACCAATGGAAGTGAACCCAACAGATAACGTTGGGGAATTGAAGAAAGAGCTGCAAAAGCTACAGCAGAGACTGCATTTTCATCTGCCACCAGAGGGTTTCTTTTTCATTTATGACCGCGACGTTATGGACGAAGACCGCTCCTTCCGTTGGCATGGTGTAGCCCACGGCGATACGATTGAGATCTTTAATGGCAGCGTTTCTGGCGGATCTTAA

Protein sequence

MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCEILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQPSTTTTTAAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS

Homology

[Close]

BLAST of CmaCh03G005230 vs. ExPASy Swiss-Prot
Match: Q9ZT95 (Ubiquitin domain-containing protein 7SL RNA1 OS=Arabidopsis thaliana OX=3702 GN=7SL1 PE=3 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 1.7e-18
Identity = 89/274 (32.48%), Postives = 126/274 (45.99%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           M+V    E G +F+I + F +TVLEIKEKI+K   IP+ KQ L  +G  L+DD       
Sbjct: 1   MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60

Query: 61  ILQHSRIQLLVASESQ-NNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSN 120
           IL  SR+ L ++ ++  N S  Q++   QID        KQ    I        I     
Sbjct: 61  ILFESRLLLRISPDADPNQSNEQTEQSKQIDDK------KQEFCGIQDSSESKKI----- 120

Query: 121 ASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQPS-TTTTTAAAATV 180
              T +  +R            ++  L P  + + A  G T    QP+   +T+  A  V
Sbjct: 121 ---TRVMARRVHNIYSSLPAYSLDELLGPKYSATVAVGGRTNQVVQPTEQASTSGTAKEV 180

Query: 181 ATSGSSKNKLKVMVQP-KF---------GNSKIPMEVNPTDNVGELKKELQKLQQRLHFH 240
                S  + K+   P KF             I +EVN  DNV EL+KEL K+Q+R   +
Sbjct: 181 LRDSDSPVEKKIKTNPMKFTVHVKPYQEDTRMIHVEVNADDNVEELRKELVKMQERGELN 240

Query: 241 LPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEI 263
           LP E F  +     + E +SF+W+ VA GDTIEI
Sbjct: 241 LPHEAFHLVSSELPLTETKSFKWNRVADGDTIEI 260

[Close]

BLAST of CmaCh03G005230 vs. ExPASy Swiss-Prot
Match: Q9ZQZ6 (Ubiquitin domain-containing protein 7SL RNA2 OS=Arabidopsis thaliana OX=3702 GN=7SL2 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.8e-15
Identity = 82/273 (30.04%), Postives = 121/273 (44.32%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           M+V    E G +F+I + F +TVL+IKEKI+K   IP+ KQ L  +G  L+DD       
Sbjct: 1   MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60

Query: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120
           IL  S +  +      N S  Q++   QID        KQ    I             + 
Sbjct: 61  ILFESLLLRISPDADPNQSNEQTEQSKQIDDK------KQEFCGIQD--------SSESK 120

Query: 121 SPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQPSTTTTTAAAATVAT 180
             T +  +R            ++  L P  + +    G T    Q +   +T+  A    
Sbjct: 121 KLTRVMARRVHNVYSSLPAYSLDELLGPKYSATVTVGGRTNQVVQTTEQASTSGTAKEVL 180

Query: 181 SGS----------SKNKLKVMVQPKFGNSK-IPMEVNPTDNVGELKKELQKLQQRLHFHL 240
             S          +  K  V V+P   ++K I +EVN  DNV EL+KEL K+Q+R   +L
Sbjct: 181 RDSDSPVEKKIKTNPMKFTVHVKPYQEDTKMIQVEVNADDNVEELRKELVKMQERGELNL 240

Query: 241 PPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEI 263
           P E F  +     + E +SF+W+ VA GDTIE+
Sbjct: 241 PHEAFHLVSSELPLIETKSFKWNRVADGDTIEL 259

[Close]

BLAST of CmaCh03G005230 vs. ExPASy Swiss-Prot
Match: Q9SHE7 (Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana OX=3702 GN=RUB1 PE=1 SV=3)

HSP 1 Score: 46.2 bits (108), Expect = 6.8e-04
Identity = 34/141 (24.11%), Postives = 69/141 (48.94%), Query Frame = 0


Query: 10  GEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCEILQHSRIQL 69
           G+   +EV   DT+  +K KIQ    IP  +Q LIF G  L+D R +    I + S + L
Sbjct: 10  GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 69

Query: 70  LV----ASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNASPTEL 129
           ++     +  +  + +  + +  I+P  +I R+K+R+ +   + P+   ++ +     +L
Sbjct: 70  VLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAG---KQL 129

Query: 130 QDQRSLRDSEMSENSEVEVCL 147
            D ++ +D  +   S + + L
Sbjct: 130 ADDKTAKDYNIEGGSVLHLVL 147

[Close]

BLAST of CmaCh03G005230 vs. ExPASy Swiss-Prot
Match: P0C030 (Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB1 PE=2 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 6.8e-04
Identity = 34/141 (24.11%), Postives = 69/141 (48.94%), Query Frame = 0


Query: 10  GEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCEILQHSRIQL 69
           G+   +EV   DT+  +K KIQ    IP  +Q LIF G  L+D R +    I + S + L
Sbjct: 10  GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 69

Query: 70  LV----ASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNASPTEL 129
           ++     +  +  + +  + +  I+P  +I R+K+R+ +   + P+   ++ +     +L
Sbjct: 70  VLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAG---KQL 129

Query: 130 QDQRSLRDSEMSENSEVEVCL 147
            D ++ +D  +   S + + L
Sbjct: 130 ADDKTAKDYNIEGGSVLHLVL 147

[Close]

BLAST of CmaCh03G005230 vs. ExPASy Swiss-Prot
Match: P0C031 (Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB2 PE=2 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 6.8e-04
Identity = 34/141 (24.11%), Postives = 69/141 (48.94%), Query Frame = 0


Query: 10  GEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCEILQHSRIQL 69
           G+   +EV   DT+  +K KIQ    IP  +Q LIF G  L+D R +    I + S + L
Sbjct: 10  GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 69

Query: 70  LV----ASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNASPTEL 129
           ++     +  +  + +  + +  I+P  +I R+K+R+ +   + P+   ++ +     +L
Sbjct: 70  VLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAG---KQL 129

Query: 130 QDQRSLRDSEMSENSEVEVCL 147
            D ++ +D  +   S + + L
Sbjct: 130 ADDKTAKDYNIEGGSVLHLVL 147

[Close]

BLAST of CmaCh03G005230 vs. ExPASy TrEMBL
Match: A0A6J1IPZ4 (biquitin domain-containing protein 7SL RNA1-like OS=Cucurbita maxima OX=3661 GN=LOC111478395 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.4e-137
Identity = 256/271 (94.46%), Postives = 256/271 (94.46%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE
Sbjct: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120
           ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA
Sbjct: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120

Query: 121 SPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQPSTTTTTAAAATVAT 180
           SPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQP              
Sbjct: 121 SPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQP-------------- 180

Query: 181 SGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDR 240
            GSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDR
Sbjct: 181 -GSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDR 240

Query: 241 DVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           DVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS
Sbjct: 241 DVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 256

[Close]

BLAST of CmaCh03G005230 vs. ExPASy TrEMBL
Match: A0A6J1GE65 (biquitin domain-containing protein 7SL RNA1-like OS=Cucurbita moschata OX=3662 GN=LOC111453369 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 3.0e-127
Identity = 246/272 (90.44%), Postives = 246/272 (90.44%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE
Sbjct: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSN- 120
           ILQHSRIQLLVASESQNNSQS    QPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSN 
Sbjct: 61  ILQHSRIQLLVASESQNNSQS----QPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120

Query: 121 ASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQPSTTTTTAAAATVA 180
           ASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAA GMTT                  
Sbjct: 121 ASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTT------------------ 180

Query: 181 TSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYD 240
             GSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYD
Sbjct: 181 --GSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYD 240

Query: 241 RDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           RDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS
Sbjct: 241 RDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 248

[Close]

BLAST of CmaCh03G005230 vs. ExPASy TrEMBL
Match: A0A6J1CMB8 (actin-related protein 8-like OS=Momordica charantia OX=3673 GN=LOC111012442 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 3.5e-72
Identity = 164/273 (60.07%), Postives = 188/273 (68.86%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P KG  F IEVGFFDTVLEIKEKIQKYH IPIPKQTLIFNGHVLQDDRDVEFCE
Sbjct: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120
           ILQ+SRI+L+VA    NNS S +      + N++      +I   NS  PI+     +N 
Sbjct: 61  ILQNSRIKLIVAPSDHNNSSSNNNNN---NNNNAAAAASVKIETPNS--PISPSPNSNNK 120

Query: 121 SPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQPSTTTTTAAAATVAT 180
               LQ Q  +      +   +E  + P   +S             ++     +AAT AT
Sbjct: 121 MIHHLQSQFPIEIDPTKDQIIMESAVVPLNELS-----------DNNSEIEVVSAATSAT 180

Query: 181 SGS--SKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIY 240
           +GS  S  KLKVMV+PK G+ KIPMEVN +DNVGELKKELQKLQQRLHFHLP EGFFFIY
Sbjct: 181 AGSTGSSKKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIY 240

Query: 241 DRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           DRDVMDEDRSFRWHGVAHGDTIEIFNGSV+GGS
Sbjct: 241 DRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS 257

[Close]

BLAST of CmaCh03G005230 vs. ExPASy TrEMBL
Match: V4U8Q0 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10018056mg PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 1.0e-71
Identity = 158/295 (53.56%), Postives = 205/295 (69.49%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P++G+AF IEVGFFDTVLEIKEKI+KY  IP+PKQTL+FNG VLQDDRDVE CE
Sbjct: 1   MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60

Query: 61  ILQHSRIQLLVASESQNNSQS-QSQPQPQI-----------------------DPNHSIG 120
           ILQ+SRIQLLVAS+++   ++ QS P  +I                       D N ++ 
Sbjct: 61  ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120

Query: 121 RLKQRIHDINSVGPINGIMLQSNASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAA 180
           RLK++IH++ S+ P+N +++QS  S  ELQD RSLRD E+ +N+E++V +RPSPT     
Sbjct: 121 RLKEKIHEMESI-PVNRLLVQS--SGAELQDHRSLRDCELMDNAEIDVHVRPSPT----- 180

Query: 181 LGMTTPPPQPSTTTTTAAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKK 240
                     +T+TT        +SG    KLK++V  + GN +IP+EVN +DNV EL+K
Sbjct: 181 ----------ATSTT--------SSGMGSRKLKLLVLTQCGNKRIPVEVNASDNVSELRK 240

Query: 241 ELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           ELQKL QR HFHLP +G+FFIY ++VMD+DRSFRWH V  GDTIEIFNGSV+GGS
Sbjct: 241 ELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269

[Close]

BLAST of CmaCh03G005230 vs. ExPASy TrEMBL
Match: A0A067G7E3 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g044874mg PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.3e-71
Identity = 158/295 (53.56%), Postives = 205/295 (69.49%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P++G+AF IEVGFFDTVLEIKEKI+KY  IP+PKQTL+FNG VLQDDRDVE CE
Sbjct: 1   MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60

Query: 61  ILQHSRIQLLVASESQNNSQS-QSQPQPQI-----------------------DPNHSIG 120
           ILQ+SRIQLLVAS+++   ++ QS P  +I                       D N ++ 
Sbjct: 61  ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120

Query: 121 RLKQRIHDINSVGPINGIMLQSNASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAA 180
           RLK++IH++ S+ P+N +++QS  S  ELQD RSLRD E+ +N+E++V +RPSPT     
Sbjct: 121 RLKEKIHEMESI-PVNRLLVQS--SGAELQDHRSLRDCELMDNAEIDVHVRPSPT----- 180

Query: 181 LGMTTPPPQPSTTTTTAAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKK 240
                     +T+TT        +SG    KLK++V  + GN +IP+EVN +DNV EL+K
Sbjct: 181 ----------ATSTT--------SSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRK 240

Query: 241 ELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           ELQKL QR HFHLP +G+FFIY ++VMD+DRSFRWH V  GDTIEIFNGSV+GGS
Sbjct: 241 ELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269

[Close]

BLAST of CmaCh03G005230 vs. NCBI nr
Match: XP_022978395.1 (biquitin domain-containing protein 7SL RNA1-like [Cucurbita maxima])

HSP 1 Score: 498.0 bits (1281), Expect = 5.0e-137
Identity = 256/271 (94.46%), Postives = 256/271 (94.46%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE
Sbjct: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120
           ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA
Sbjct: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120

Query: 121 SPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQPSTTTTTAAAATVAT 180
           SPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQP              
Sbjct: 121 SPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQP-------------- 180

Query: 181 SGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDR 240
            GSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDR
Sbjct: 181 -GSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDR 240

Query: 241 DVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           DVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS
Sbjct: 241 DVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 256

[Close]

BLAST of CmaCh03G005230 vs. NCBI nr
Match: KAG6603761.1 (Ubiquitin domain-containing protein 7SL RNA1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 496.9 bits (1278), Expect = 1.1e-136
Identity = 265/275 (96.36%), Postives = 265/275 (96.36%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE
Sbjct: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSN- 120
           ILQHSRIQLLVASESQNNSQS    QPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSN 
Sbjct: 61  ILQHSRIQLLVASESQNNSQS----QPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120

Query: 121 ASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTT-PPPQPS--TTTTTAAAA 180
           ASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAA GMTT PPPQPS  TTTTT AAA
Sbjct: 121 ASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTTPPPPQPSTTTTTTTVAAA 180

Query: 181 TVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFF 240
           TVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFF
Sbjct: 181 TVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFF 240

Query: 241 IYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           IYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS
Sbjct: 241 IYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 271

[Close]

BLAST of CmaCh03G005230 vs. NCBI nr
Match: XP_023543067.1 (biquitin domain-containing protein 7SL RNA1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.1 bits (1211), Expect = 6.5e-129
Identity = 246/271 (90.77%), Postives = 246/271 (90.77%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE
Sbjct: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120
           ILQHSRIQLLVASESQNNSQSQ Q QPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA
Sbjct: 61  ILQHSRIQLLVASESQNNSQSQPQSQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120

Query: 121 SPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQPSTTTTTAAAATVAT 180
           S TELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAA GMTT                   
Sbjct: 121 STTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTT------------------- 180

Query: 181 SGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDR 240
            GSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDR
Sbjct: 181 -GSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDR 240

Query: 241 DVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           DVMDEDRSFRWHGVA GDTIEIFNGSVSGGS
Sbjct: 241 DVMDEDRSFRWHGVAQGDTIEIFNGSVSGGS 251

[Close]

BLAST of CmaCh03G005230 vs. NCBI nr
Match: XP_022950206.1 (biquitin domain-containing protein 7SL RNA1-like [Cucurbita moschata])

HSP 1 Score: 464.5 bits (1194), Expect = 6.1e-127
Identity = 246/272 (90.44%), Postives = 246/272 (90.44%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE
Sbjct: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSN- 120
           ILQHSRIQLLVASESQNNSQS    QPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSN 
Sbjct: 61  ILQHSRIQLLVASESQNNSQS----QPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120

Query: 121 ASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQPSTTTTTAAAATVA 180
           ASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAA GMTT                  
Sbjct: 121 ASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTT------------------ 180

Query: 181 TSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYD 240
             GSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYD
Sbjct: 181 --GSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYD 240

Query: 241 RDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           RDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS
Sbjct: 241 RDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 248

[Close]

BLAST of CmaCh03G005230 vs. NCBI nr
Match: XP_022142282.1 (actin-related protein 8-like [Momordica charantia])

HSP 1 Score: 281.6 bits (719), Expect = 7.3e-72
Identity = 164/273 (60.07%), Postives = 188/273 (68.86%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P KG  F IEVGFFDTVLEIKEKIQKYH IPIPKQTLIFNGHVLQDDRDVEFCE
Sbjct: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120
           ILQ+SRI+L+VA    NNS S +      + N++      +I   NS  PI+     +N 
Sbjct: 61  ILQNSRIKLIVAPSDHNNSSSNNNNN---NNNNAAAAASVKIETPNS--PISPSPNSNNK 120

Query: 121 SPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQPSTTTTTAAAATVAT 180
               LQ Q  +      +   +E  + P   +S             ++     +AAT AT
Sbjct: 121 MIHHLQSQFPIEIDPTKDQIIMESAVVPLNELS-----------DNNSEIEVVSAATSAT 180

Query: 181 SGS--SKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIY 240
           +GS  S  KLKVMV+PK G+ KIPMEVN +DNVGELKKELQKLQQRLHFHLP EGFFFIY
Sbjct: 181 AGSTGSSKKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIY 240

Query: 241 DRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           DRDVMDEDRSFRWHGVAHGDTIEIFNGSV+GGS
Sbjct: 241 DRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS 257

[Close]

BLAST of CmaCh03G005230 vs. TAIR 10
Match: AT4G05230.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 2.3e-47
Identity = 113/271 (41.70%), Postives = 144/271 (53.14%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV F    G  F IE+G++DTVLEIK+KI+KY  IP+ KQTL+F G+VLQD  D+E C 
Sbjct: 1   MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60

Query: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120
           IL HSRIQL ++S  Q+ +  Q     Q   ++S  +     H+   + P          
Sbjct: 61  ILNHSRIQLSISSPDQSRNNIQVFKTEQFPQSNSTEQTSNGHHESTVMIP---------- 120

Query: 121 SPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQPSTTTTTAAAATVAT 180
                          MS N+                                        
Sbjct: 121 ---------------MSNNN---------------------------------------- 180

Query: 181 SGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDR 240
           + ++  KL+VMV PK G  KIP++VN  DNVGEL+KEL K+QQR    LP EG+FFIY +
Sbjct: 181 NNNNPKKLRVMVLPKSGTRKIPVDVNAGDNVGELRKELAKIQQRFQLSLPQEGYFFIYKQ 206

Query: 241 DVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           +VMDE+RSFRWH V  GDTIEIFNGSVSGGS
Sbjct: 241 NVMDENRSFRWHRVDQGDTIEIFNGSVSGGS 206

[Close]

BLAST of CmaCh03G005230 vs. TAIR 10
Match: AT4G03370.1 (Ubiquitin family protein )

HSP 1 Score: 109.0 bits (271), Expect = 6.1e-24
Identity = 94/281 (33.45%), Postives = 136/281 (48.40%), Query Frame = 0


Query: 8   EKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCEILQHSRI 67
           E G  F+I++G  DTVL  K KI+    IP+ +QT+ F G +L+D  D+   +ILQ+  +
Sbjct: 8   ESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQNPLL 67

Query: 68  QLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNASPTELQD 127
            L + S   N +Q+Q  PQ   +P H   + +    D       N ++L     P     
Sbjct: 68  HLSI-SPDDNPTQNQ-VPQSPSNPIHEFVKNQDSAEDKK-----NPVLLHQTGKPPLPPK 127

Query: 128 QRSLRDSEMSENSE--------VEVCLRPSPTVSTAALGMTTPPPQPSTTTTTAAAATV- 187
              L     S+N          V   L P  T S   +G      Q      ++++ +V 
Sbjct: 128 SSPLTTENFSKNQHDRPVITKMVPELLGPQGT-SPVTVGRRRNRDQEVQNRVSSSSDSVK 187

Query: 188 --------ATSGSSKN---KLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHF 247
                        +KN   K+ VMVQP     +I +EVN   NV  L+KEL K+Q+R   
Sbjct: 188 EVINIPDTPARKKTKNYPLKITVMVQPFEETRRIQVEVNVLSNVEVLRKELVKMQERGEL 247

Query: 248 HLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVS 269
           +LP EGFFFI+ +DV+ ED+SF  + VA GDTIEIF G V+
Sbjct: 248 NLPHEGFFFIHKQDVLREDQSFMANRVAPGDTIEIFQGYVT 280

[Close]

BLAST of CmaCh03G005230 vs. TAIR 10
Match: AT4G05260.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 3.7e-21
Identity = 86/269 (31.97%), Postives = 134/269 (49.81%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV F  + G  F IE+G++DTVLEIK+KI+KY  IP+P QTL F G+ L+D  D+  C+
Sbjct: 1   MDVYFETQNGRKFCIELGYWDTVLEIKKKIEKYQRIPVPNQTLFF-GNALEDHLDIGQCK 60

Query: 61  ILQHSRIQLLVASESQNNSQS--QSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQS 120
           ILQ+S + L V  +  +N+    Q++ QP I  +   G       D+    P+   ++ +
Sbjct: 61  ILQNSHVVLFVLPDPNDNNDQVLQTEEQPPIIGDLIYG------EDL----PLTTEVVLN 120

Query: 121 NASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQPSTTTTTAAAATV 180
                 +QD   +R+++ S  S+    +      S       TPP       T      +
Sbjct: 121 IRPFCPVQDS-PVRNNDQSPPSDAAKDIIKGHQDSPVRNNEQTPPSDSVKENT-----NI 180

Query: 181 ATSGSSKNKLKVMVQPKFGNSKIPMEVN----PTDNVGELKKELQKLQQRLHFHLPPEG- 240
             S   K  L + V P  G  K    ++     T  V  L++EL + + R H   P +G 
Sbjct: 181 QDSPVGKIILTLRVMPYSGKIKAAKNLHFITYKTYRVKMLRQELVQNELRDHLDRPQDGD 240

Query: 241 FFFIYDRDVMDEDRSFRWHGVAHGDTIEI 263
           +FF++   V++ED+SF W+ VAH D +EI
Sbjct: 241 YFFVHKGRVLNEDQSFEWNSVAHTDIVEI 252

[Close]

BLAST of CmaCh03G005230 vs. TAIR 10
Match: AT4G03360.1 (Ubiquitin family protein )

HSP 1 Score: 95.5 bits (236), Expect = 6.9e-20
Identity = 94/280 (33.57%), Postives = 144/280 (51.43%), Query Frame = 0


Query: 3   VLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCEIL 62
           V+   + G +F I+V F+DTVL IK KI+     P+ KQ LIF   VLQD  ++  C+I 
Sbjct: 4   VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIR 63

Query: 63  QHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINS-VGPINGIMLQSNAS 122
            +SRI LL  S   N +Q+Q  PQ    P+     + + +++ +S + P +  +     S
Sbjct: 64  HNSRI-LLSISPDDNPTQNQ-VPQTNQSPSTPSNPIHEFVNNQDSPLSPKSSALTMEKFS 123

Query: 123 PTELQDQRSLR-------DSEMSENS-EVEVCLRPSPTVSTAALGMTTPPPQPSTTTTTA 182
             + QD+  L        D+  S  S  ++  L P  + ST A+G      Q      ++
Sbjct: 124 KNQ-QDRPPLMRVVAKRIDNGSSRPSYSLDELLAPRDS-STVAVGSIRNRDQEVKNRVSS 183

Query: 183 AAATVA----TSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHL 242
            + +V      + S   K+ VMVQP      I +EV   DNV EL+KEL K+Q+R   +L
Sbjct: 184 PSDSVEEVINITDSLAMKMIVMVQPYGYTRMIQVEVTADDNVEELRKELVKMQERGELNL 243

Query: 243 PPEGFFFI--YDRDVMDEDRSFRWHGVAHGDTIEIFNGSV 268
           P   ++ I  + + V+ ED+SF  +GVA+GDTI+I  G V
Sbjct: 244 PQGMYYLIHKHKQAVLHEDQSFLTNGVAYGDTIQISQGYV 279

[Close]

BLAST of CmaCh03G005230 vs. TAIR 10
Match: AT4G02950.1 (Ubiquitin family protein )

HSP 1 Score: 95.1 bits (235), Expect = 9.1e-20
Identity = 92/282 (32.62%), Postives = 145/282 (51.42%), Query Frame = 0


Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           + V+   + G +F I+V F+DTVL IK KI+     P+ KQ LIF   VLQD  ++  C+
Sbjct: 36  ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95

Query: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINS-VGPINGIMLQSN 120
           I  +SRI LL  S   N +Q+Q  PQ    P+     + + +++ +S + P +  +    
Sbjct: 96  IRHNSRI-LLSISPDDNPTQNQ-VPQTNQSPSTPSNPIHEFVNNQDSPLSPQSSALTMEK 155

Query: 121 ASPTELQDQRSLR-------DSEMSENS-EVEVCLRPSPTVSTAALGMTTPPPQP----S 180
            S  + QD+  L        D+  S  S  ++  L P  + ST A+G      Q      
Sbjct: 156 FSKNQ-QDRPPLMRVVAKRIDNGSSRPSYSLDELLAPRDS-STVAVGSIRNRDQEVKNRE 215

Query: 181 TTTTTAAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHF 240
           ++ + +    +  + S   K+ VM+QP      I +EV   DNV EL+KEL K+Q+R   
Sbjct: 216 SSPSDSVEEVINFTDSPAMKMIVMLQPYGYTRMIQVEVTADDNVEELRKELVKMQERGEL 275

Query: 241 HLPPEGFFFI--YDRDVMDEDRSFRWHGVAHGDTIEIFNGSV 268
           +LP   ++ I  + + V+ ED+SF  +GVA+GDTI+I  G V
Sbjct: 276 NLPQGMYYLIHKHKQAVLHEDQSFLTNGVAYGDTIQISQGYV 313

The following BLAST results are available for this feature:

BLAST of CmaCh03G005230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT95	1.7e-18	32.48	Ubiquitin domain-containing protein 7SL RNA1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9ZQZ6	3.8e-15	30.04	Ubiquitin domain-containing protein 7SL RNA2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SHE7	6.8e-04	24.11	Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana OX=3702 GN=RUB1 PE=1 S...	[more]
P0C030	6.8e-04	24.11	Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica OX=39947 GN=RU...	[more]
P0C031	6.8e-04	24.11	Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica OX=39947 GN=RU...	[more]

BLAST of CmaCh03G005230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IPZ4	2.4e-137	94.46	biquitin domain-containing protein 7SL RNA1-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1GE65	3.0e-127	90.44	biquitin domain-containing protein 7SL RNA1-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1CMB8	3.5e-72	60.07	actin-related protein 8-like OS=Momordica charantia OX=3673 GN=LOC111012442 PE=4...	[more]
V4U8Q0	1.0e-71	53.56	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10018056mg PE=4 ...	[more]
A0A067G7E3	1.3e-71	53.56	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g044874mg PE=4 SV=1	[more]

BLAST of CmaCh03G005230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978395.1	5.0e-137	94.46	biquitin domain-containing protein 7SL RNA1-like [Cucurbita maxima]	[more]
KAG6603761.1	1.1e-136	96.36	Ubiquitin domain-containing protein 7SL RNA1, partial [Cucurbita argyrosperma su...	[more]
XP_023543067.1	6.5e-129	90.77	biquitin domain-containing protein 7SL RNA1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022950206.1	6.1e-127	90.44	biquitin domain-containing protein 7SL RNA1-like [Cucurbita moschata]	[more]
XP_022142282.1	7.3e-72	60.07	actin-related protein 8-like [Momordica charantia]	[more]

BLAST of CmaCh03G005230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05230.1	2.3e-47	41.70	Ubiquitin-like superfamily protein	[more]
AT4G03370.1	6.1e-24	33.45	Ubiquitin family protein	[more]
AT4G05260.1	3.7e-21	31.97	Ubiquitin-like superfamily protein	[more]
AT4G03360.1	6.9e-20	33.57	Ubiquitin family protein	[more]
AT4G02950.1	9.1e-20	32.62	Ubiquitin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..72 e-value: 1.4E-9 score: 47.8 coord: 73..147 e-value: 4.2 score: 8.5 coord: 190..265 e-value: 5.2 score: 7.6
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 196..261 e-value: 1.4E-6 score: 27.9 coord: 5..71 e-value: 1.0E-13 score: 50.8
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 188..269 score: 9.6566
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..71 score: 14.447187
None	No IPR available	GENE3D	3.10.20.90		coord: 173..267 e-value: 1.0E-8 score: 36.8
None	No IPR available	GENE3D	3.10.20.90		coord: 85..146 e-value: 2.7E-5 score: 25.9
None	No IPR available	GENE3D	3.10.20.90		coord: 1..84 e-value: 6.8E-16 score: 59.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..127
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..270
None	No IPR available	PANTHER	PTHR10621:SF38	UBIQUITIN DOMAIN-CONTAINING PROTEIN 7SL RNA1-RELATED	coord: 1..270
None	No IPR available	CDD	cd17039	Ubl_ubiquitin_like	coord: 200..263 e-value: 5.1321E-4 score: 35.6498
None	No IPR available	CDD	cd17039	Ubl_ubiquitin_like	coord: 3..70 e-value: 1.6185E-11 score: 56.8358
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 27..52
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 4..72
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 174..262
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 88..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G005230.1	CmaCh03G005230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding