
CmaCh03G004950 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCACCACATAAAAGCAAGAGCCCTACCAATAAAACCGATAAGCCTCGCCGTCGTCTTCCTTCAATCATCTCCCGTAACAATTAACCAGAAATGATCTCACTCAAACCCTCCCCTCACCACAACGGATCCTCATTTCTCTCCAATTCTTCAAATCTTCATCAAAAACTCAATCCAATTACTAGACTTCGGTCCAATTTCCCCCCTCCATTCCGCACCAAAACGACCTTTAGAATCCGCGCCGAACAGGCCGAATCAGGCAACGGCGCTCAAAGACGAACATTCTTGACTCTCGAAGAGGCCGGCCTCGTCGAAGTATCCGGCCTCAGCACGCACGAACGATTTCTGTGCCGTTTAACCGTATATCCTCTGTTTCTCTATCTCGCCTTTCACTATATTTTGCGTTCTTCAATTATTACTGAACCTGTTCTTTGTGTTGGTTTAGATCTCGTCTCTGAATTTACTGAAAGTGATAGCGGAGGAAGAGAAATGTTCTATCGAAGAGTTGAATGCGGGGAGATTATGCGACTGGTTTCTCAAGGATAAGCTGAAAAGAGAGCAGAATTTGGACTCTGCCGTTCTTCAATGGGACGATTCCGACCCTCTCTTCTGAGGTTTTCCTTTCCCTCCTCCTATCCGAGCTTTACTTCTCAGACACATGAATTTCTATTTATTTACCTGTTAACTTATTAATTTAATTGTTATTTTAACATTTTCACTTCATTATTCAAAAGCTTGTGATTTTTAGAAATATAACGTTGGTGTTTAAATTTTAATTAAATCGTTGTTTGTGTTATGTACCGTAGTTTTGTAATATTTTTTTTTTTAAAAATAAATAAATAAAAAGTATCTCTTCCCGTG TCCACCACATAAAAGCAAGAGCCCTACCAATAAAACCGATAAGCCTCGCCGTCGTCTTCCTTCAATCATCTCCCGTAACAATTAACCAGAAATGATCTCACTCAAACCCTCCCCTCACCACAACGGATCCTCATTTCTCTCCAATTCTTCAAATCTTCATCAAAAACTCAATCCAATTACTAGACTTCGGTCCAATTTCCCCCCTCCATTCCGCACCAAAACGACCTTTAGAATCCGCGCCGAACAGGCCGAATCAGGCAACGGCGCTCAAAGACGAACATTCTTGACTCTCGAAGAGGCCGGCCTCGTCGAAGTATCCGGCCTCAGCACGCACGAACGATTTCTGTGCCGTTTAACCATCTCGTCTCTGAATTTACTGAAAGTGATAGCGGAGGAAGAGAAATGTTCTATCGAAGAGTTGAATGCGGGGAGATTATGCGACTGGTTTCTCAAGGATAAGCTGAAAAGAGAGCAGAATTTGGACTCTGCCGTTCTTCAATGGGACGATTCCGACCCTCTCTTCTGAGGTTTTCCTTTCCCTCCTCCTATCCGAGCTTTACTTCTCAGACACATGAATTTCTATTTATTTACCTGTTAACTTATTAATTTAATTGTTATTTTAACATTTTCACTTCATTATTCAAAAGCTTGTGATTTTTAGAAATATAACGTTGGTGTTTAAATTTTAATTAAATCGTTGTTTGTGTTATGTACCGTAGTTTTGTAATATTTTTTTTTTTAAAAATAAATAAATAAAAAGTATCTCTTCCCGTG ATGATCTCACTCAAACCCTCCCCTCACCACAACGGATCCTCATTTCTCTCCAATTCTTCAAATCTTCATCAAAAACTCAATCCAATTACTAGACTTCGGTCCAATTTCCCCCCTCCATTCCGCACCAAAACGACCTTTAGAATCCGCGCCGAACAGGCCGAATCAGGCAACGGCGCTCAAAGACGAACATTCTTGACTCTCGAAGAGGCCGGCCTCGTCGAAGTATCCGGCCTCAGCACGCACGAACGATTTCTGTGCCGTTTAACCATCTCGTCTCTGAATTTACTGAAAGTGATAGCGGAGGAAGAGAAATGTTCTATCGAAGAGTTGAATGCGGGGAGATTATGCGACTGGTTTCTCAAGGATAAGCTGAAAAGAGAGCAGAATTTGGACTCTGCCGTTCTTCAATGGGACGATTCCGACCCTCTCTTCTGA MISLKPSPHHNGSSFLSNSSNLHQKLNPITRLRSNFPPPFRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF Homology
BLAST of CmaCh03G004950 vs. ExPASy TrEMBL
Match: A0A6J1ISV2 (uncharacterized protein LOC111478111 OS=Cucurbita maxima OX=3661 GN=LOC111478111 PE=4 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 2.0e-74 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of CmaCh03G004950 vs. ExPASy TrEMBL
Match: A0A6J1GCY7 (uncharacterized protein LOC111453037 OS=Cucurbita moschata OX=3662 GN=LOC111453037 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 2.5e-72 Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of CmaCh03G004950 vs. ExPASy TrEMBL
Match: A0A0A0KHI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516880 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.7e-52 Identity = 115/146 (78.77%), Postives = 121/146 (82.88%), Query Frame = 0
BLAST of CmaCh03G004950 vs. ExPASy TrEMBL
Match: A0A6J1CKG5 (uncharacterized protein LOC111012432 OS=Momordica charantia OX=3673 GN=LOC111012432 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.2e-45 Identity = 114/153 (74.51%), Postives = 118/153 (77.12%), Query Frame = 0
BLAST of CmaCh03G004950 vs. ExPASy TrEMBL
Match: A0A5C7GRM7 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_026567 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 4.7e-39 Identity = 94/146 (64.38%), Postives = 113/146 (77.40%), Query Frame = 0
BLAST of CmaCh03G004950 vs. NCBI nr
Match: XP_022977984.1 (uncharacterized protein LOC111478111 [Cucurbita maxima]) HSP 1 Score: 288.1 bits (736), Expect = 4.2e-74 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of CmaCh03G004950 vs. NCBI nr
Match: XP_022949732.1 (uncharacterized protein LOC111453037 [Cucurbita moschata] >KAG6603726.1 hypothetical protein SDJN03_04335, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033905.1 hypothetical protein SDJN02_03630 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 281.2 bits (718), Expect = 5.1e-72 Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of CmaCh03G004950 vs. NCBI nr
Match: XP_023544671.1 (uncharacterized protein LOC111804184 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 280.0 bits (715), Expect = 1.1e-71 Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of CmaCh03G004950 vs. NCBI nr
Match: XP_038881387.1 (uncharacterized protein LOC120072922 [Benincasa hispida]) HSP 1 Score: 235.7 bits (600), Expect = 2.4e-58 Identity = 125/147 (85.03%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of CmaCh03G004950 vs. NCBI nr
Match: XP_004134733.1 (uncharacterized protein LOC101211873 [Cucumis sativus] >KGN49180.1 hypothetical protein Csa_002941 [Cucumis sativus]) HSP 1 Score: 214.2 bits (544), Expect = 7.6e-52 Identity = 115/146 (78.77%), Postives = 121/146 (82.88%), Query Frame = 0
BLAST of CmaCh03G004950 vs. TAIR 10
Match: AT4G21445.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 143.7 bits (361), Expect = 1.2e-34 Identity = 66/91 (72.53%), Postives = 81/91 (89.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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