CmaCh03G004770 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G004770
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	dof zinc finger protein MNB1A-like
Location	Cma_Chr03: 4795972 .. 4796703 (+)
RNA-Seq Expression	CmaCh03G004770
Synteny	CmaCh03G004770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGAGTTCGAAACAGGTTTCGATCGATGTATTTGATTGGAGCAAGACGCTTACGCCGCCAAAGAAACTGACAAGCGCCGCCGTGAAACGATCGCACCACCACCAAAATCCGTCACAAACTGAGCAATTAAAGTGTCCAAGATGCGATTCAACCAACACCAAATTCTGTTACTACAATAATTACAACAAATCTCAGCCGCGCCATTTTTGTAGAGCTTGTAAACGTCACTGGACCAATGGTGGAACTCTCCGAAACGTCCCTGTTGGTGGCGGCCGTAAAAACAAACGCTTAAAGAAAAAACAAATCCCCAAATCCTCCTCCTCCTCCTCCGCAGCAGCCGCCGCCGTCGCCGCCGTAGACGGCGTGATGATAAACACCCAATTTTCCCTTCCTCTGTATCAAGGACTGATTTTCCCTCCGCCGCCGCCGCCGCCATCGTCGACCAACTGGCTGGAATGTGAAAACTTCACTACAAATTACGGAATTCTCAATTCTCAAAACGCAGATTTCTCAGGCGTTTCAACAACAACGGATCAAAAATTGAAGGCCATAGAAACAGAGCAACCCAACACCACCGGTACACATCATCCATGGCAGCTTCCAACCACCAGCTGCAGCGGCGCCGACATGTCGAACAGCAGCTACTGGAGCTGGGAAGACATCGACACCTTCGCCACAACTGATCTCAATATCCTATGGGACGTCGATCACGACATCAAACCTTAA

mRNA sequence

ATGGGTTTGAGTTCGAAACAGGTTTCGATCGATGTATTTGATTGGAGCAAGACGCTTACGCCGCCAAAGAAACTGACAAGCGCCGCCGTGAAACGATCGCACCACCACCAAAATCCGTCACAAACTGAGCAATTAAAGTGTCCAAGATGCGATTCAACCAACACCAAATTCTGTTACTACAATAATTACAACAAATCTCAGCCGCGCCATTTTTGTAGAGCTTGTAAACGTCACTGGACCAATGGTGGAACTCTCCGAAACGTCCCTGTTGGTGGCGGCCGTAAAAACAAACGCTTAAAGAAAAAACAAATCCCCAAATCCTCCTCCTCCTCCTCCGCAGCAGCCGCCGCCGTCGCCGCCGTAGACGGCGTGATGATAAACACCCAATTTTCCCTTCCTCTGTATCAAGGACTGATTTTCCCTCCGCCGCCGCCGCCGCCATCGTCGACCAACTGGCTGGAATGTGAAAACTTCACTACAAATTACGGAATTCTCAATTCTCAAAACGCAGATTTCTCAGGCGTTTCAACAACAACGGATCAAAAATTGAAGGCCATAGAAACAGAGCAACCCAACACCACCGGTACACATCATCCATGGCAGCTTCCAACCACCAGCTGCAGCGGCGCCGACATGTCGAACAGCAGCTACTGGAGCTGGGAAGACATCGACACCTTCGCCACAACTGATCTCAATATCCTATGGGACGTCGATCACGACATCAAACCTTAA

Coding sequence (CDS)

ATGGGTTTGAGTTCGAAACAGGTTTCGATCGATGTATTTGATTGGAGCAAGACGCTTACGCCGCCAAAGAAACTGACAAGCGCCGCCGTGAAACGATCGCACCACCACCAAAATCCGTCACAAACTGAGCAATTAAAGTGTCCAAGATGCGATTCAACCAACACCAAATTCTGTTACTACAATAATTACAACAAATCTCAGCCGCGCCATTTTTGTAGAGCTTGTAAACGTCACTGGACCAATGGTGGAACTCTCCGAAACGTCCCTGTTGGTGGCGGCCGTAAAAACAAACGCTTAAAGAAAAAACAAATCCCCAAATCCTCCTCCTCCTCCTCCGCAGCAGCCGCCGCCGTCGCCGCCGTAGACGGCGTGATGATAAACACCCAATTTTCCCTTCCTCTGTATCAAGGACTGATTTTCCCTCCGCCGCCGCCGCCGCCATCGTCGACCAACTGGCTGGAATGTGAAAACTTCACTACAAATTACGGAATTCTCAATTCTCAAAACGCAGATTTCTCAGGCGTTTCAACAACAACGGATCAAAAATTGAAGGCCATAGAAACAGAGCAACCCAACACCACCGGTACACATCATCCATGGCAGCTTCCAACCACCAGCTGCAGCGGCGCCGACATGTCGAACAGCAGCTACTGGAGCTGGGAAGACATCGACACCTTCGCCACAACTGATCTCAATATCCTATGGGACGTCGATCACGACATCAAACCTTAA

Protein sequence

MGLSSKQVSIDVFDWSKTLTPPKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSAAAAAVAAVDGVMINTQFSLPLYQGLIFPPPPPPPSSTNWLECENFTTNYGILNSQNADFSGVSTTTDQKLKAIETEQPNTTGTHHPWQLPTTSCSGADMSNSSYWSWEDIDTFATTDLNILWDVDHDIKP

Homology

[Close]

BLAST of CmaCh03G004770 vs. ExPASy Swiss-Prot
Match: Q9FZA4 (Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.3e-25
Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = 0


Query: 23  KKLTSAAVKRSHHHQNPSQTE-QLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTN 82
           K +  A+  +    Q P Q + QLKCPRCDS+NTKFCYYNNY+ SQPRHFC+ACKR+WT 
Sbjct: 4   KNMIVASSHQQQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTR 63

Query: 83  GGTLRNVPVGGG-RKNKRLKKKQIPKSSSSSSAAAAAVAAVDGVMINTQFSL----PLYQ 139
           GGTLRNVPVGG  RKNKR+K+     ++++S+ +    ++ +     + FS     PL+ 
Sbjct: 64  GGTLRNVPVGGSYRKNKRVKRPSTATTTTASTVSTTNSSSPNNPHQISHFSSMNHHPLFY 123

[Close]

BLAST of CmaCh03G004770 vs. ExPASy Swiss-Prot
Match: Q8LDR0 (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 1.8e-24
Identity = 53/80 (66.25%), Postives = 63/80 (78.75%), Query Frame = 0


Query: 32  RSHHHQNPSQTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVG 91
           R+H +   +  + LKCPRC+S NTKFCYYNNYN SQPRHFC+ C+R+WT GG LRNVPVG
Sbjct: 38  RAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVG 97

Query: 92  GG-RKNKRLKKKQIPKSSSS 111
           GG RK KR K KQ+P SSS+
Sbjct: 98  GGCRKAKRSKTKQVPSSSSA 117

[Close]

BLAST of CmaCh03G004770 vs. ExPASy Swiss-Prot
Match: Q39088 (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 4.1e-24
Identity = 54/88 (61.36%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 41  QTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLK 100
           Q EQL CPRCDS+NTKFCYYNNYN SQPRHFC+AC+R+WT+GGTLR+VPVGGG   ++  
Sbjct: 26  QQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGG--TRKSA 85

Query: 101 KKQIPKSSSSSSAAAAAVAAVDGVMINT 129
           K+    S+SSSS+ +  V+  +GV + T
Sbjct: 86  KRSRTCSNSSSSSVSGVVSNSNGVPLQT 111

[Close]

BLAST of CmaCh03G004770 vs. ExPASy Swiss-Prot
Match: Q8L9V6 (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.5e-23
Identity = 55/100 (55.00%), Postives = 70/100 (70.00%), Query Frame = 0


Query: 22  PKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTN 81
           P ++  +  +R+     P     LKCPRCDS+NTKFCYYNNYN +QPRHFC+ C+R+WT 
Sbjct: 54  PSRMGGSMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQ 113

Query: 82  GGTLRNVPVGGG-RKNKRLKKKQIPKSSSSSSAAAAAVAA 121
           GG LRNVPVGGG R+N +  K    KSSSSSS  +++V A
Sbjct: 114 GGALRNVPVGGGCRRNNKKGKNGNLKSSSSSSKQSSSVNA 153

[Close]

BLAST of CmaCh03G004770 vs. ExPASy Swiss-Prot
Match: O24463 (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.6e-23
Identity = 52/80 (65.00%), Postives = 63/80 (78.75%), Query Frame = 0


Query: 39  PSQTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGG-RKNK 98
           P   E LKCPRCDS NTKFCYYNNY+ SQPR+FC+AC+R+WT+GGTLRNVP+GGG RKNK
Sbjct: 54  PQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCRKNK 113

Query: 99  RLKKKQIPKSSSSSSAAAAA 118
              +  +   +SSSS+A  A
Sbjct: 114 HASRFVLGSHTSSSSSATYA 133

[Close]

BLAST of CmaCh03G004770 vs. ExPASy TrEMBL
Match: A0A6J1IP95 (dof zinc finger protein DOF5.3-like OS=Cucurbita maxima OX=3661 GN=LOC111478708 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 1.8e-139
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60
           MGLSSKQVSIDVFDWSKTLTPPKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY
Sbjct: 1   MGLSSKQVSIDVFDWSKTLTPPKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60

Query: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSAAAAAVAA 120
           NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSAAAAAVAA
Sbjct: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSAAAAAVAA 120

Query: 121 VDGVMINTQFSLPLYQGLIFPPPPPPPSSTNWLECENFTTNYGILNSQNADFSGVSTTTD 180
           VDGVMINTQFSLPLYQGLIFPPPPPPPSSTNWLECENFTTNYGILNSQNADFSGVSTTTD
Sbjct: 121 VDGVMINTQFSLPLYQGLIFPPPPPPPSSTNWLECENFTTNYGILNSQNADFSGVSTTTD 180

Query: 181 QKLKAIETEQPNTTGTHHPWQLPTTSCSGADMSNSSYWSWEDIDTFATTDLNILWDVDHD 240
           QKLKAIETEQPNTTGTHHPWQLPTTSCSGADMSNSSYWSWEDIDTFATTDLNILWDVDHD
Sbjct: 181 QKLKAIETEQPNTTGTHHPWQLPTTSCSGADMSNSSYWSWEDIDTFATTDLNILWDVDHD 240

Query: 241 IKP 244
           IKP
Sbjct: 241 IKP 243

[Close]

BLAST of CmaCh03G004770 vs. ExPASy TrEMBL
Match: A0A6J1GEQ8 (dof zinc finger protein MNB1A-like OS=Cucurbita moschata OX=3662 GN=LOC111453517 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 4.8e-129
Identity = 228/245 (93.06%), Postives = 237/245 (96.73%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60
           MGLSSKQVSIDVFDWSKTLTPP+KL+SAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY
Sbjct: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60

Query: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSAAAAAVAA 120
           NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKK IPK SSSS+ A+AAVAA
Sbjct: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPK-SSSSAIASAAVAA 120

Query: 121 VDGVMINTQFSLPLYQGLIF--PPPPPPPSSTNWLECENFTTNYGILNSQNADFSGVSTT 180
            DGVMINTQFSLPLYQGLIF  PPPPPPPSSTNW+ECENFTTNYGILNSQNADFSGVSTT
Sbjct: 121 ADGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTT 180

Query: 181 TDQKLKAIETEQPNTTGTHHPWQLPTTSCSGADMSNSSYWSWEDIDTFATTDLNILWDVD 240
           TDQ+LKAIETEQPN+T THHPWQLPTT+CSGADMSNSSYWSWEDIDTFATTDLNILWD +
Sbjct: 181 TDQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDN 240

Query: 241 HDIKP 244
           HDIKP
Sbjct: 241 HDIKP 244

[Close]

BLAST of CmaCh03G004770 vs. ExPASy TrEMBL
Match: A0A5D3CPL5 (Dof zinc finger protein DOF1.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007280 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 7.3e-85
Identity = 180/272 (66.18%), Postives = 191/272 (70.22%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTP------PKKLTSAAVKRSHH---HQNPSQTEQLKCPRCD 60
           MGLSSKQVSID FDWSK L        PK   S+ VKRS H   +Q   Q EQLKCPRCD
Sbjct: 1   MGLSSKQVSIDGFDWSKALMQAQKLELPKLAPSSGVKRSQHQNQNQIQPQIEQLKCPRCD 60

Query: 61  STNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSS 120
           STNTKFCYYNNYNKSQPRHFCRACKRHWT GGTLRNVPVGGGRKNKRLKKK    S  SS
Sbjct: 61  STNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRLKKKPTTNSKKSS 120

Query: 121 SAAAAAVAAVDGVMINTQF------SLPLYQGLIFPPPPPPPSSTNWLECENFTTNYGIL 180
           S+ AA  AA    +IN Q       +LPLYQGLIF     PPSS+NW ECENFTTNYGIL
Sbjct: 121 SSTAATAAA---DLINPQMDVHHFQNLPLYQGLIF----SPPSSSNWAECENFTTNYGIL 180

Query: 181 NSQNADFSGVSTTT--------------DQKLKAIETEQPNTTGTHHPWQLPTTSCSGAD 240
           NSQN DFS VSTTT              DQ+LK  ETEQP    THHPWQLP+T C   D
Sbjct: 181 NSQNPDFSAVSTTTSTHSPISPKFNNYSDQELKPTETEQP----THHPWQLPSTGCGIGD 240

Query: 241 MSNSSYWSWEDIDTFATTDLNILWDVDHDIKP 244
           MS SSYWSW+DI+TF  TDLNI WD +HDIKP
Sbjct: 241 MS-SSYWSWDDINTFTATDLNIPWDDEHDIKP 260

[Close]

BLAST of CmaCh03G004770 vs. ExPASy TrEMBL
Match: A0A1S3AZE8 (dof zinc finger protein DOF1.4-like OS=Cucumis melo OX=3656 GN=LOC103484541 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 7.3e-85
Identity = 180/272 (66.18%), Postives = 191/272 (70.22%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTP------PKKLTSAAVKRSHH---HQNPSQTEQLKCPRCD 60
           MGLSSKQVSID FDWSK L        PK   S+ VKRS H   +Q   Q EQLKCPRCD
Sbjct: 1   MGLSSKQVSIDGFDWSKALMQAQKLELPKLAPSSGVKRSQHQNQNQIQPQIEQLKCPRCD 60

Query: 61  STNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSS 120
           STNTKFCYYNNYNKSQPRHFCRACKRHWT GGTLRNVPVGGGRKNKRLKKK    S  SS
Sbjct: 61  STNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRLKKKPTTNSKKSS 120

Query: 121 SAAAAAVAAVDGVMINTQF------SLPLYQGLIFPPPPPPPSSTNWLECENFTTNYGIL 180
           S+ AA  AA    +IN Q       +LPLYQGLIF     PPSS+NW ECENFTTNYGIL
Sbjct: 121 SSTAATAAA---DLINPQMDVHHFQNLPLYQGLIF----SPPSSSNWAECENFTTNYGIL 180

Query: 181 NSQNADFSGVSTTT--------------DQKLKAIETEQPNTTGTHHPWQLPTTSCSGAD 240
           NSQN DFS VSTTT              DQ+LK  ETEQP    THHPWQLP+T C   D
Sbjct: 181 NSQNPDFSAVSTTTSTHSPISPKFNNYSDQELKPTETEQP----THHPWQLPSTGCGIGD 240

Query: 241 MSNSSYWSWEDIDTFATTDLNILWDVDHDIKP 244
           MS SSYWSW+DI+TF  TDLNI WD +HDIKP
Sbjct: 241 MS-SSYWSWDDINTFTATDLNIPWDDEHDIKP 260

[Close]

BLAST of CmaCh03G004770 vs. ExPASy TrEMBL
Match: A0A0A0KLF4 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517150 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.6e-84
Identity = 178/272 (65.44%), Postives = 190/272 (69.85%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTP------PKKLTSAAVKRSHHH---QNPSQTEQLKCPRCD 60
           MGLSSKQVSID FDWSK L        PK   S+ VKRS H    Q   Q EQLKCPRCD
Sbjct: 1   MGLSSKQVSIDGFDWSKALMQAQKLELPKLAPSSGVKRSQHQNQIQIQPQIEQLKCPRCD 60

Query: 61  STNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSS 120
           STNTKFCYYNNYNKSQPRHFCRACKRHWT GGTLRNVPVGGGRKNKRLKKK    S  SS
Sbjct: 61  STNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRLKKKPTTNSKKSS 120

Query: 121 SAAAAAVAAVDGVMINTQF------SLPLYQGLIFPPPPPPPSSTNWLECENFTTNYGIL 180
           S+ AA  AA    +IN Q       +LPLYQGLIF     PPSS+NW ECENFTTNYGIL
Sbjct: 121 SSTAATTAA---DLINPQMDVHHFQNLPLYQGLIF----SPPSSSNWAECENFTTNYGIL 180

Query: 181 NSQNADFSGVSTTT--------------DQKLKAIETEQPNTTGTHHPWQLPTTSCSGAD 240
           NSQN DFS VSTTT              D++LK  ETEQP    THHPWQLP+T C   D
Sbjct: 181 NSQNPDFSAVSTTTSTHSPISPKFNNYSDKELKPTETEQP----THHPWQLPSTGCGIGD 240

Query: 241 MSNSSYWSWEDIDTFATTDLNILWDVDHDIKP 244
           MSN SYW+W+DI+TF  TDLNI WD +HDIKP
Sbjct: 241 MSN-SYWTWDDINTFTATDLNIPWDDEHDIKP 260

[Close]

BLAST of CmaCh03G004770 vs. NCBI nr
Match: XP_022978891.1 (dof zinc finger protein DOF5.3-like [Cucurbita maxima])

HSP 1 Score: 505.0 bits (1299), Expect = 3.7e-139
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60
           MGLSSKQVSIDVFDWSKTLTPPKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY
Sbjct: 1   MGLSSKQVSIDVFDWSKTLTPPKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60

Query: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSAAAAAVAA 120
           NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSAAAAAVAA
Sbjct: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSAAAAAVAA 120

Query: 121 VDGVMINTQFSLPLYQGLIFPPPPPPPSSTNWLECENFTTNYGILNSQNADFSGVSTTTD 180
           VDGVMINTQFSLPLYQGLIFPPPPPPPSSTNWLECENFTTNYGILNSQNADFSGVSTTTD
Sbjct: 121 VDGVMINTQFSLPLYQGLIFPPPPPPPSSTNWLECENFTTNYGILNSQNADFSGVSTTTD 180

Query: 181 QKLKAIETEQPNTTGTHHPWQLPTTSCSGADMSNSSYWSWEDIDTFATTDLNILWDVDHD 240
           QKLKAIETEQPNTTGTHHPWQLPTTSCSGADMSNSSYWSWEDIDTFATTDLNILWDVDHD
Sbjct: 181 QKLKAIETEQPNTTGTHHPWQLPTTSCSGADMSNSSYWSWEDIDTFATTDLNILWDVDHD 240

Query: 241 IKP 244
           IKP
Sbjct: 241 IKP 243

[Close]

BLAST of CmaCh03G004770 vs. NCBI nr
Match: XP_023544607.1 (dof zinc finger protein MNB1A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 477.6 bits (1228), Expect = 6.2e-131
Identity = 232/245 (94.69%), Postives = 237/245 (96.73%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60
           MGLSSKQVSIDVFDWSKTLTPP+KL+SAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY
Sbjct: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60

Query: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSAAAAAVAA 120
           NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSS    AAVAA
Sbjct: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSS----AAVAA 120

Query: 121 VDGVMINTQFSLPLYQGLIF--PPPPPPPSSTNWLECENFTTNYGILNSQNADFSGVSTT 180
            DGVMINTQFSLPLYQGLIF  PPPPPPPSSTNW+ECENFTTNYGILNSQNADFSGVSTT
Sbjct: 121 ADGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTT 180

Query: 181 TDQKLKAIETEQPNTTGTHHPWQLPTTSCSGADMSNSSYWSWEDIDTFATTDLNILWDVD 240
           TDQ+LKAIETEQPNTTGTHHPWQLPTT+CSGADMSNSSYWSWEDIDTFATTDLNILWD D
Sbjct: 181 TDQELKAIETEQPNTTGTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDD 240

Query: 241 HDIKP 244
           HDIKP
Sbjct: 241 HDIKP 241

[Close]

BLAST of CmaCh03G004770 vs. NCBI nr
Match: KAG6603709.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 477.2 bits (1227), Expect = 8.2e-131
Identity = 232/248 (93.55%), Postives = 240/248 (96.77%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60
           MGLSSKQVSIDVFDWSKTLTPP+KL+SAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY
Sbjct: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60

Query: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSA---AAAA 120
           NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSS+   A+AA
Sbjct: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSSSAIASAA 120

Query: 121 VAAVDGVMINTQFSLPLYQGLIF--PPPPPPPSSTNWLECENFTTNYGILNSQNADFSGV 180
           VAA DGVMINTQFSLPLYQGLIF  PPPPPPPSSTNW+ECENFTTNYGILNSQNADFSGV
Sbjct: 121 VAAADGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGV 180

Query: 181 STTTDQKLKAIETEQPNTTGTHHPWQLPTTSCSGADMSNSSYWSWEDIDTFATTDLNILW 240
           STTTDQ+LKAIETEQPN+T THHPWQLPTT+CSGADMSNSSYWSWEDIDTFATTDLNILW
Sbjct: 181 STTTDQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILW 240

Query: 241 DVDHDIKP 244
           D DHDIKP
Sbjct: 241 DDDHDIKP 248

[Close]

BLAST of CmaCh03G004770 vs. NCBI nr
Match: KAG7033886.1 (Dof zinc finger protein DOF5.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 472.2 bits (1214), Expect = 2.6e-129
Identity = 229/245 (93.47%), Postives = 237/245 (96.73%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60
           MGLSSKQVSIDVFDWSKTLTPP+KL+SAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY
Sbjct: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60

Query: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSAAAAAVAA 120
           NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKK IPK SSSS+ A+AAVAA
Sbjct: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPK-SSSSAIASAAVAA 120

Query: 121 VDGVMINTQFSLPLYQGLIF--PPPPPPPSSTNWLECENFTTNYGILNSQNADFSGVSTT 180
            DGVMINTQFSLPLYQGLIF  PPPPPPPSSTNW+ECENFTTNYGILNSQNADFSGVSTT
Sbjct: 121 ADGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTT 180

Query: 181 TDQKLKAIETEQPNTTGTHHPWQLPTTSCSGADMSNSSYWSWEDIDTFATTDLNILWDVD 240
           TDQ+LKAIETEQPN+T THHPWQLPTT+CSGADMSNSSYWSWEDIDTFATTDLNILWD D
Sbjct: 181 TDQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDD 240

Query: 241 HDIKP 244
           HDIKP
Sbjct: 241 HDIKP 244

[Close]

BLAST of CmaCh03G004770 vs. NCBI nr
Match: XP_022950407.1 (dof zinc finger protein MNB1A-like [Cucurbita moschata])

HSP 1 Score: 470.3 bits (1209), Expect = 1.0e-128
Identity = 228/245 (93.06%), Postives = 237/245 (96.73%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60
           MGLSSKQVSIDVFDWSKTLTPP+KL+SAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY
Sbjct: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60

Query: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSAAAAAVAA 120
           NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKK IPK SSSS+ A+AAVAA
Sbjct: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPK-SSSSAIASAAVAA 120

Query: 121 VDGVMINTQFSLPLYQGLIF--PPPPPPPSSTNWLECENFTTNYGILNSQNADFSGVSTT 180
            DGVMINTQFSLPLYQGLIF  PPPPPPPSSTNW+ECENFTTNYGILNSQNADFSGVSTT
Sbjct: 121 ADGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTT 180

Query: 181 TDQKLKAIETEQPNTTGTHHPWQLPTTSCSGADMSNSSYWSWEDIDTFATTDLNILWDVD 240
           TDQ+LKAIETEQPN+T THHPWQLPTT+CSGADMSNSSYWSWEDIDTFATTDLNILWD +
Sbjct: 181 TDQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDN 240

Query: 241 HDIKP 244
           HDIKP
Sbjct: 241 HDIKP 244

[Close]

BLAST of CmaCh03G004770 vs. TAIR 10
Match: AT1G28310.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 115.9 bits (289), Expect = 4.4e-26
Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = 0


Query: 23  KKLTSAAVKRSHHHQNPSQTE-QLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTN 82
           K +  A+  +    Q P Q + QLKCPRCDS+NTKFCYYNNY+ SQPRHFC+ACKR+WT 
Sbjct: 4   KNMIVASSHQQQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTR 63

Query: 83  GGTLRNVPVGGG-RKNKRLKKKQIPKSSSSSSAAAAAVAAVDGVMINTQFSL----PLYQ 139
           GGTLRNVPVGG  RKNKR+K+     ++++S+ +    ++ +     + FS     PL+ 
Sbjct: 64  GGTLRNVPVGGSYRKNKRVKRPSTATTTTASTVSTTNSSSPNNPHQISHFSSMNHHPLFY 123

[Close]

BLAST of CmaCh03G004770 vs. TAIR 10
Match: AT1G28310.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 115.9 bits (289), Expect = 4.4e-26
Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = 0


Query: 23  KKLTSAAVKRSHHHQNPSQTE-QLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTN 82
           K +  A+  +    Q P Q + QLKCPRCDS+NTKFCYYNNY+ SQPRHFC+ACKR+WT 
Sbjct: 18  KNMIVASSHQQQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTR 77

Query: 83  GGTLRNVPVGGG-RKNKRLKKKQIPKSSSSSSAAAAAVAAVDGVMINTQFSL----PLYQ 139
           GGTLRNVPVGG  RKNKR+K+     ++++S+ +    ++ +     + FS     PL+ 
Sbjct: 78  GGTLRNVPVGGSYRKNKRVKRPSTATTTTASTVSTTNSSSPNNPHQISHFSSMNHHPLFY 137

[Close]

BLAST of CmaCh03G004770 vs. TAIR 10
Match: AT5G60850.1 (OBF binding protein 4 )

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-25
Identity = 53/80 (66.25%), Postives = 63/80 (78.75%), Query Frame = 0


Query: 32  RSHHHQNPSQTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVG 91
           R+H +   +  + LKCPRC+S NTKFCYYNNYN SQPRHFC+ C+R+WT GG LRNVPVG
Sbjct: 38  RAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVG 97

Query: 92  GG-RKNKRLKKKQIPKSSSS 111
           GG RK KR K KQ+P SSS+
Sbjct: 98  GGCRKAKRSKTKQVPSSSSA 117

[Close]

BLAST of CmaCh03G004770 vs. TAIR 10
Match: AT3G50410.1 (OBF binding protein 1 )

HSP 1 Score: 113.2 bits (282), Expect = 2.9e-25
Identity = 54/88 (61.36%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 41  QTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLK 100
           Q EQL CPRCDS+NTKFCYYNNYN SQPRHFC+AC+R+WT+GGTLR+VPVGGG   ++  
Sbjct: 26  QQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGG--TRKSA 85

Query: 101 KKQIPKSSSSSSAAAAAVAAVDGVMINT 129
           K+    S+SSSS+ +  V+  +GV + T
Sbjct: 86  KRSRTCSNSSSSSVSGVVSNSNGVPLQT 111

[Close]

BLAST of CmaCh03G004770 vs. TAIR 10
Match: AT1G07640.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-24
Identity = 55/100 (55.00%), Postives = 70/100 (70.00%), Query Frame = 0


Query: 22  PKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTN 81
           P ++  +  +R+     P     LKCPRCDS+NTKFCYYNNYN +QPRHFC+ C+R+WT 
Sbjct: 54  PSRMGGSMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQ 113

Query: 82  GGTLRNVPVGGG-RKNKRLKKKQIPKSSSSSSAAAAAVAA 121
           GG LRNVPVGGG R+N +  K    KSSSSSS  +++V A
Sbjct: 114 GGALRNVPVGGGCRRNNKKGKNGNLKSSSSSSKQSSSVNA 153

The following BLAST results are available for this feature:

BLAST of CmaCh03G004770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZA4	6.3e-25	50.00	Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV...	[more]
Q8LDR0	1.8e-24	66.25	Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV...	[more]
Q39088	4.1e-24	61.36	Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV...	[more]
Q8L9V6	1.5e-23	55.00	Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV...	[more]
O24463	2.6e-23	65.00	Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1	[more]

BLAST of CmaCh03G004770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IP95	1.8e-139	100.00	dof zinc finger protein DOF5.3-like OS=Cucurbita maxima OX=3661 GN=LOC111478708 ...	[more]
A0A6J1GEQ8	4.8e-129	93.06	dof zinc finger protein MNB1A-like OS=Cucurbita moschata OX=3662 GN=LOC111453517...	[more]
A0A5D3CPL5	7.3e-85	66.18	Dof zinc finger protein DOF1.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3AZE8	7.3e-85	66.18	dof zinc finger protein DOF1.4-like OS=Cucumis melo OX=3656 GN=LOC103484541 PE=4...	[more]
A0A0A0KLF4	3.6e-84	65.44	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517150 PE...	[more]

BLAST of CmaCh03G004770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978891.1	3.7e-139	100.00	dof zinc finger protein DOF5.3-like [Cucurbita maxima]	[more]
XP_023544607.1	6.2e-131	94.69	dof zinc finger protein MNB1A-like [Cucurbita pepo subsp. pepo]	[more]
KAG6603709.1	8.2e-131	93.55	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7033886.1	2.6e-129	93.47	Dof zinc finger protein DOF5.4, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022950407.1	1.0e-128	93.06	dof zinc finger protein MNB1A-like [Cucurbita moschata]	[more]

BLAST of CmaCh03G004770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28310.1	4.4e-26	50.00	Dof-type zinc finger DNA-binding family protein	[more]
AT1G28310.2	4.4e-26	50.00	Dof-type zinc finger DNA-binding family protein	[more]
AT5G60850.1	1.3e-25	66.25	OBF binding protein 4	[more]
AT3G50410.1	2.9e-25	61.36	OBF binding protein 1	[more]
AT1G07640.2	1.1e-24	55.00	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 43..97 e-value: 1.5E-31 score: 108.3
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 47..83
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 45..99 score: 27.418905
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..110
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 33..207
None	No IPR available	PANTHER	PTHR31992:SF97	OS06G0284500 PROTEIN	coord: 33..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G004770.1	CmaCh03G004770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding