CmaCh03G004470 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G004470
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Plant protein 1589 of unknown function
Location	Cma_Chr03: 4642972 .. 4643925 (+)
RNA-Seq Expression	CmaCh03G004470
Synteny	CmaCh03G004470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCACCCACAAAATTTTCTCTCGGCTTTTCCCTTCACTTTCTCGCATTTTCTCTCTCTCCAAACAGAATCACATCCCCCATGGAAGACGACCCCTCTGCTTCATACATCCACATGGTATTTCTTTTCTTTTTCTTTTATTTTATTTTATTTTTCTCTTTACATTTCGTTGATTTATGTGATGAACGGACGGATGATGTGCGGGCGTATGATTATTGCGGTGTAGGTGCACCACCTGATCGAACAGTGTATAGTTTTCAACATGAACAAAGAAGAGTGCATGGAAGCTCTCTCCAAACATGCCAATATCAAACCGGTCATCACTTCTACCGGTTCGTTTCTCTCACGTGATGTGCACGGAGTTCGACTCCTTTTTTTATTTTTTATTTTTTTATTTTTATTTTGTAAAATGTGTGCAGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATAAGAAGAAACGACGTGACGTTACGACGAGGGCTGCTGATGGGACTTCGTCCGACACGTCGGATTTCAACTTGCTGGATTCGGGGGATACGACGTCGGGTAGGTAGATGGGTAGACAAGCGGCGGTGATGGTGGATGGAAATTAATTAAAAAAAATGAAATAAAATAAAACAAGAACATGCCTTTGTACGACGCCGTTTTTAACGATCGTAGGTGAATGGAACAGCGGCGTTGGGTTGGGAGGAGTCGATGGGATAATTTGAGGGGAGTGAAGATATTTTAGGATACCTTGCTGACACGTGGGGAAACATGGCTACACGTGGCAGCATGCTGCAACTTTCTTTTTTTTAATGTATTGCTATCGTTTGCTGATTGGACCTTGTCGGAGGTGGTAGTAATTTAAATGGAATTTCCTTTTTTATTTTTATTTTTATTTTTTGTTTTCCTTCCAGTGAAATTAAGACAGTCCGATCCAATCGGTAATTGCCAC

mRNA sequence

TTCCCACCCACAAAATTTTCTCTCGGCTTTTCCCTTCACTTTCTCGCATTTTCTCTCTCTCCAAACAGAATCACATCCCCCATGGAAGACGACCCCTCTGCTTCATACATCCACATGGTGCACCACCTGATCGAACAGTGTATAGTTTTCAACATGAACAAAGAAGAGTGCATGGAAGCTCTCTCCAAACATGCCAATATCAAACCGGTCATCACTTCTACCGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATAAGAAGAAACGACGTGACGTTACGACGAGGGCTGCTGATGGGACTTCGTCCGACACGTCGGATTTCAACTTGCTGGATTCGGGGGATACGACGTCGGGTAGGTAGATGGGTAGACAAGCGGCGGTGATGGTGGATGGAAATTAATTAAAAAAAATGAAATAAAATAAAACAAGAACATGCCTTTGTACGACGCCGTTTTTAACGATCGTAGGTGAATGGAACAGCGGCGTTGGGTTGGGAGGAGTCGATGGGATAATTTGAGGGGAGTGAAGATATTTTAGGATACCTTGCTGACACGTGGGGAAACATGGCTACACGTGGCAGCATGCTGCAACTTTCTTTTTTTTAATGTATTGCTATCGTTTGCTGATTGGACCTTGTCGGAGGTGGTAGTAATTTAAATGGAATTTCCTTTTTTATTTTTATTTTTATTTTTTGTTTTCCTTCCAGTGAAATTAAGACAGTCCGATCCAATCGGTAATTGCCAC

Coding sequence (CDS)

ATGGAAGACGACCCCTCTGCTTCATACATCCACATGGTGCACCACCTGATCGAACAGTGTATAGTTTTCAACATGAACAAAGAAGAGTGCATGGAAGCTCTCTCCAAACATGCCAATATCAAACCGGTCATCACTTCTACCGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATAAGAAGAAACGACGTGACGTTACGACGAGGGCTGCTGATGGGACTTCGTCCGACACGTCGGATTTCAACTTGCTGGATTCGGGGGATACGACGTCGGGTAGGTAG

Protein sequence

MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTSGR

Homology

[Close]

BLAST of CmaCh03G004470 vs. ExPASy TrEMBL
Match: A0A6J1IHY2 (uncharacterized protein LOC111477620 OS=Cucurbita maxima OX=3661 GN=LOC111477620 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.4e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF
Sbjct: 1  MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTSGR 98
          EAYKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTSGR
Sbjct: 61 EAYKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTSGR 97

[Close]

BLAST of CmaCh03G004470 vs. ExPASy TrEMBL
Match: A0A6J1GEA1 (uncharacterized protein LOC111453395 OS=Cucurbita moschata OX=3662 GN=LOC111453395 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-38
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 0


Query: 12 MVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVT 71
          MVHHLIEQCI+FNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVT
Sbjct: 1  MVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVT 60

Query: 72 TRAADGTSSDTSDFNLLDSGDTTSGR 98
          TRAADG SSDTSDFNLLDSG+TTSGR
Sbjct: 61 TRAADGNSSDTSDFNLLDSGNTTSGR 86

[Close]

BLAST of CmaCh03G004470 vs. ExPASy TrEMBL
Match: A0A0A0KZG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293290 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 80/95 (84.21%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          M+DDPSASYIHMVHHLIE+CI+FNM KEEC+EALSKHANI+PVITSTVWNELEKENKEFF
Sbjct: 1  MDDDPSASYIHMVHHLIEKCIIFNMTKEECLEALSKHANIEPVITSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTS 96
          EAYKKKRRDVTT+   G+SS+T+DFNLL S DTTS
Sbjct: 61 EAYKKKRRDVTTK--KGSSSETTDFNLLGSRDTTS 93

[Close]

BLAST of CmaCh03G004470 vs. ExPASy TrEMBL
Match: A0A6J1IAZ7 (uncharacterized protein LOC111471258 OS=Cucurbita maxima OX=3661 GN=LOC111471258 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.3e-36
Identity = 81/96 (84.38%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 1  MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          MEDDPSASYIHMVHHLIE CI+FNM+KEECMEALSKHANI+PVITSTVWNELEKENKEFF
Sbjct: 1  MEDDPSASYIHMVHHLIEICILFNMSKEECMEALSKHANIEPVITSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVTTRAADG-TSSDTSDFNLLDSGDTTS 96
          +AY+KKRRDVTTR  +G +SSDT  FNLL  GDTTS
Sbjct: 61 QAYEKKRRDVTTRKLEGNSSSDTLGFNLLGLGDTTS 96

[Close]

BLAST of CmaCh03G004470 vs. ExPASy TrEMBL
Match: A0A6J1HDK1 (uncharacterized protein LOC111463185 OS=Cucurbita moschata OX=3662 GN=LOC111463185 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.1e-35
Identity = 80/95 (84.21%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 1  MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          MEDDPSASYIHMVHHLIE  I+FNM+KEECMEALSKHANI+PV+TSTVWNELEKENKEFF
Sbjct: 1  MEDDPSASYIHMVHHLIEISILFNMSKEECMEALSKHANIEPVVTSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVTTRAADG-TSSDTSDFNLLDSGDTT 95
          EAY+KKRRDVTTR  +G +SSDTS FNLL  GDTT
Sbjct: 61 EAYEKKRRDVTTRKLEGNSSSDTSAFNLLGLGDTT 95

[Close]

BLAST of CmaCh03G004470 vs. NCBI nr
Match: XP_022977252.1 (uncharacterized protein LOC111477620 [Cucurbita maxima])

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF
Sbjct: 1  MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTSGR 98
          EAYKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTSGR
Sbjct: 61 EAYKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTSGR 97

[Close]

BLAST of CmaCh03G004470 vs. NCBI nr
Match: XP_023544368.1 (uncharacterized protein LOC111803972 [Cucurbita pepo subsp. pepo] >KAG7033856.1 hypothetical protein SDJN02_03581 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192.2 bits (487), Expect = 2.1e-45
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          MEDDPSASYIHMVHHLIEQCI+FNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF
Sbjct: 1  MEDDPSASYIHMVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTSGR 98
          EAYKKKRRDVTTRAADG SSDTSDFNLLDSG+TTSGR
Sbjct: 61 EAYKKKRRDVTTRAADGNSSDTSDFNLLDSGNTTSGR 97

[Close]

BLAST of CmaCh03G004470 vs. NCBI nr
Match: KAG6603679.1 (hypothetical protein SDJN03_04288, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.0 bits (484), Expect = 4.7e-45
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          MEDDPSASYIHMVHHLIEQCI+FNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF
Sbjct: 1  MEDDPSASYIHMVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTSGR 98
          EAYKKKRRDVTTRAADG S+DTSDFNLLDSG+TTSGR
Sbjct: 61 EAYKKKRRDVTTRAADGNSTDTSDFNLLDSGNTTSGR 97

[Close]

BLAST of CmaCh03G004470 vs. NCBI nr
Match: XP_038883060.1 (uncharacterized protein LOC120074114 [Benincasa hispida])

HSP 1 Score: 171.8 bits (434), Expect = 2.9e-39
Identity = 83/95 (87.37%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          M+DDPSASYIHMVHHLIE+CI+FNM KEECMEALSKHANIKPVITSTVWNELEKENKEFF
Sbjct: 1  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTS 96
          EAYKKKRRDVT + ++G SSDTSDFNLL S DTTS
Sbjct: 61 EAYKKKRRDVTVKVSEGNSSDTSDFNLLGSRDTTS 95

[Close]

BLAST of CmaCh03G004470 vs. NCBI nr
Match: XP_022950247.1 (uncharacterized protein LOC111453395 [Cucurbita moschata])

HSP 1 Score: 168.3 bits (425), Expect = 3.2e-38
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 0


Query: 12 MVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVT 71
          MVHHLIEQCI+FNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVT
Sbjct: 1  MVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVT 60

Query: 72 TRAADGTSSDTSDFNLLDSGDTTSGR 98
          TRAADG SSDTSDFNLLDSG+TTSGR
Sbjct: 61 TRAADGNSSDTSDFNLLDSGNTTSGR 86

[Close]

BLAST of CmaCh03G004470 vs. TAIR 10
Match: AT5G02580.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 115.2 bits (287), Expect = 3.0e-26
Identity = 51/66 (77.27%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 7  ASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKK 66
          ASYIH+VHHLIE+CIVFNM KEECM+AL KHANIKP+ITSTVW EL KENKEFFEAY+++
Sbjct: 9  ASYIHLVHHLIEECIVFNMGKEECMDALFKHANIKPIITSTVWKELAKENKEFFEAYERR 68

Query: 67 RRDVTT 73
          R ++ T
Sbjct: 69 REEIPT 74

[Close]

BLAST of CmaCh03G004470 vs. TAIR 10
Match: AT3G55240.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 110.5 bits (275), Expect = 7.5e-25
Identity = 49/67 (73.13%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          M D  SASYIHMV H+IE+C++F+M+KEEC+EALSKHANI PVITSTVW ELEKENKEFF
Sbjct: 1  MADSSSASYIHMVQHMIEKCLIFHMSKEECVEALSKHANITPVITSTVWKELEKENKEFF 60

Query: 61 EAYKKKR 68
          +AY++++
Sbjct: 61 KAYEERQ 67

[Close]

BLAST of CmaCh03G004470 vs. TAIR 10
Match: AT3G28990.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 97.4 bits (241), Expect = 6.5e-21
Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 0


Query: 1  MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          M     A YIH+V H+IE C+ FNM+KEECMEALS++ANI P+ITSTVW EL KENK+FF
Sbjct: 1  MRHSSPAVYIHLVQHMIETCLTFNMSKEECMEALSENANINPIITSTVWKELVKENKDFF 60

Query: 61 EAYKKK 67
          E Y++K
Sbjct: 61 ETYEQK 66

[Close]

BLAST of CmaCh03G004470 vs. TAIR 10
Match: AT5G02580.2 (Plant protein 1589 of unknown function )

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-15
Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = 0


Query: 7  ASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITST 48
          ASYIH+VHHLIE+CIVFNM KEECM+AL KHANIKP+ITST
Sbjct: 9  ASYIHLVHHLIEECIVFNMGKEECMDALFKHANIKPIITST 49

[Close]

BLAST of CmaCh03G004470 vs. TAIR 10
Match: AT1G10657.2 (Plant protein 1589 of unknown function )

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-14
Identity = 31/56 (55.36%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 8  SYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAY 64
          SYI MV H+IE+CI+  M ++EC++AL  HA+I P++T TVW  L++ENK+FFE Y
Sbjct: 22 SYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTLTVWRGLQRENKDFFETY 77

The following BLAST results are available for this feature:

BLAST of CmaCh03G004470 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G004470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IHY2	5.4e-47	100.00	uncharacterized protein LOC111477620 OS=Cucurbita maxima OX=3661 GN=LOC111477620...	[more]
A0A6J1GEA1	1.6e-38	96.51	uncharacterized protein LOC111453395 OS=Cucurbita moschata OX=3662 GN=LOC1114533...	[more]
A0A0A0KZG8	1.1e-36	84.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293290 PE=4 SV=1	[more]
A0A6J1IAZ7	4.3e-36	84.38	uncharacterized protein LOC111471258 OS=Cucurbita maxima OX=3661 GN=LOC111471258...	[more]
A0A6J1HDK1	2.1e-35	84.21	uncharacterized protein LOC111463185 OS=Cucurbita moschata OX=3662 GN=LOC1114631...	[more]

BLAST of CmaCh03G004470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977252.1	1.1e-46	100.00	uncharacterized protein LOC111477620 [Cucurbita maxima]	[more]
XP_023544368.1	2.1e-45	96.91	uncharacterized protein LOC111803972 [Cucurbita pepo subsp. pepo] >KAG7033856.1 ...	[more]
KAG6603679.1	4.7e-45	95.88	hypothetical protein SDJN03_04288, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038883060.1	2.9e-39	87.37	uncharacterized protein LOC120074114 [Benincasa hispida]	[more]
XP_022950247.1	3.2e-38	96.51	uncharacterized protein LOC111453395 [Cucurbita moschata]	[more]

BLAST of CmaCh03G004470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02580.1	3.0e-26	77.27	Plant protein 1589 of unknown function	[more]
AT3G55240.1	7.5e-25	73.13	Plant protein 1589 of unknown function	[more]
AT3G28990.1	6.5e-21	65.15	Plant protein 1589 of unknown function	[more]
AT5G02580.2	1.4e-15	85.37	Plant protein 1589 of unknown function	[more]
AT1G10657.2	2.0e-14	55.36	Plant protein 1589 of unknown function	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006476	Conserved hypothetical protein CHP01589, plant	TIGRFAM	TIGR01589	TIGR01589	coord: 10..65 e-value: 2.3E-25 score: 86.4
IPR006476	Conserved hypothetical protein CHP01589, plant	PFAM	PF09713	A_thal_3526	coord: 13..64 e-value: 1.4E-27 score: 95.8
IPR006476	Conserved hypothetical protein CHP01589, plant	PANTHER	PTHR31871	OS02G0137100 PROTEIN	coord: 1..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..97
None	No IPR available	PANTHER	PTHR31871:SF2	ARGININOSUCCINATE LYASE	coord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G004470.1	CmaCh03G004470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity